TCONS_00002914 (transcript) - C. hemisphaerica

Overview
NameTCONS_00002914
Unique NameTCONS_00002914
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length299

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00002914 ID=TCONS_00002914|Name=TCONS_00002914|organism=Clytia hemisphaerica|type=transcript|length=299bp
GATATATCATGGACTCCCAAGAATTTCCTCTGTCCTGACTAGCAGGATGC
TCTCTTTCTCAGGTCACTGTTTCCGTGCGAAAAACGAAATGGTGTCTGAG
GTCTTACTTTGGTGTCCTGCGGGCACTAGGCGCTCGAGAAAGCGCACTTT
TCTTGATACTTTGAAACGAGAAACAGGGCTAGAGATTGAGGAACTGGGCG
CTGCAATGGCTGATCGAGAGCTGTGGAGGGAtggttattgtttgtttccg
acctaggtccattcggacctaggtcgaaggatgatgatgatgatgatga
Run BLAST on NCBI

transcript from alignment at sc0000023:197298..197596

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00002914 ID=TCONS_00002914|Name=TCONS_00002914|organism=Clytia hemisphaerica|type=transcript|length=299bp|location=Sequence derived from alignment at sc0000023:197298..197596 (Clytia hemisphaerica)
tcatcatcatcatcatcatccttcgacctaggtccgaatggacctaggtc
ggaaacaaacaataaccaTCCCTCCACAGCTCTCGATCAGCCATTGCAGC
GCCCAGTTCCTCAATCTCTAGCCCTGTTTCTCGTTTCAAAGTATCAAGAA
AAGTGCGCTTTCTCGAGCGCCTAGTGCCCGCAGGACACCAAAGTAAGACC
TCAGACACCATTTCGTTTTTCGCACGGAAACAGTGACCTGAGAAAGAGAG
CATCCTGCTAGTCAGGACAGAGGAAATTCTTGGGAGTCCATGATATATC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001587XLOC_001587Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00002914-exon-sc0000023-1491911889:197298..197596TCONS_00002914-exon-sc0000023-1491911889:197298..197596Clytia hemisphaericaexon
TCONS_00002914-exon-sc0000023-1510915933:197298..197596TCONS_00002914-exon-sc0000023-1510915933:197298..197596Clytia hemisphaericaexon
TCONS_00002914-exon-sc0000023-1575043694:197298..197596TCONS_00002914-exon-sc0000023-1575043694:197298..197596Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000023supercontigsc0000023:197298..197596 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.625342	0.0329514	2.26763	1.60495	1.17089	1.77198	0.987879	2.3703	1.82601	3.20243	3.15182	5.25822	3.52059	2.72419	2.50265	3.34948	2.28938	4.55017	6.66131	1.55264	0	0.560121	1.18502	0	2.11758	4.24461	2.34935	1.8138	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00002914 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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