TCONS_00002878 (transcript) - C. hemisphaerica

Overview
NameTCONS_00002878
Unique NameTCONS_00002878
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2718

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00002878 ID=TCONS_00002878|Name=TCONS_00002878|organism=Clytia hemisphaerica|type=transcript|length=2718bp
TATGTTGCCTTTATCATTTATAGAAAACAAGTAACAAAGCtacttttcaa
atatattttatatttcaaaGCTACTTTGATTTTGACCATGACTTCTCTTT
CTacaaagttgaaacttttttctattttggtctCTGGACCAATATTTGAT
ACTGTGAAACACCTTGAAGATGCAACCAAAACAATGAGTTAGGCTGGAAA
ACTTGGAAATAACGAACAATGTCGAATAACATATTTTTCTGTTAGCTTTC
AACTTGAAAagtatttttacagaaaattacTTCGACGCGTTCTTTCGATG
ATACAAAATACATCCATGCCAGAGAAATCTGTACGTCACCGTCCTATGAT
CTGTCAATTGTACCGTTTGAACACTGATACAGATGTTGAAAGCTCATCGG
AAGTCGaaggaaaaacaaaatacaatccTTCGTTTGAGGGCAAGTAGTTA
AGCTCCGCCCAGTCAAGTCGAGCTACCAATATTCAAGTATCCTATCTCCT
CCACATCAGATCCACCCTGACCACCCGCTAGGTAACTTCCGGGACATACC
ATCTTGGAAGCGAATCGGATCCAGCTTTCCTTCAAATCCACCGAAAAACA
GCAGCCGACCTCCCTCTCATCACTTGGCATTATGTTTTGATCTCATCTTT
CATTCGAAACTTTAAAGAACGCTAATGGTGAAAGTGGAGCTACAAATGGT
ACTCAAAGACGTGTATATTTTCAATGTCTTATCACCAATGACTTACACCG
ATTTGAGATACAATCATAGACGTTTCGAATGTTTCCGAATTCATCAATAA
TGAATTCCAATGGAAAGCCTTGATCAGAAAGTATTAAAACGCGTTCACCA
TACATTGAGTTAAAATCACAATCATGTTGACCAAAGCGCACCTGATGCTT
TCAACGAATGGCAGTCTTCAATTACACTTAACATCCGCTATCAAGAAATG
TTTGGGAAACGTTTCGAAACAGAATTTTAGTTGCGTCCAAAGAAATACCA
GTACCCGGGATGATATTCTCAATGGGATGAATTTGGTGACCATGGAAAAA
GTTGTTGCAGCGGTTTGCGAAAGACAACCTGACCAATAATACACTGACAG
TCAAAGAGAAAAGAAGATTATCCTTAACTATCTCTTGCTCAGCAGGTCAG
GGGAATGAGAAGACAGACCAGTACGAAATATTGCGAACAAGAGATAACGA
GTCTGGTAGATTGACCGAAAGATTCTAATGTCAGACGAAACGAACTAAAA
GCGTCGCAGCGCCCTCTCCCAATCAACTGTTGTATATTTTGAGTAAATGA
ATATCTACGCTCATGGTATCAAGCATGAAGTTTAGAGCCCGATGATTACA
TACGGCTGACGGTATTTATCAGGGTGATGCAATACATAACTCCAAGCAAT
CGTCAAGCTGCCATGTGGGAATGCTCTTCCTCGACCTTGGAATGATCTCT
AACAGGATACGAATTTGTGGCATGAGCATCCCCATTATTGTGGCTTCAAC
AACCTGGATTCGATTGGTGGATGAAATTTGTGATAATGATGGAATTGTTT
TGACATAGCTGATGGATGTTGTCTTCTCCGTAGATGCAGTTACTTGCTTG
GTGATTGTTGCGAACCATTGGTGTATTTATAAGAGTATTCAATACAATCG
TTGAGATATGGTATGATATGCTGATGGATGGATTATCTAGAAGTGATTTC
TTTGGTTGAAAGATGACCTCTTCTAGCCCAGTCATCAACCGTGGCCAATG
TTGCTTGGCCAATGTTGCTTGGCCAGTGTTTCAAATCAGATCGTTCTATT
TTTGGAATGAAAAATCGTCATTTGAAGAGCGACTGTTAAATGAAGTTGTC
TCGATATCAATTCTGTAATATTGGTTACCAATTCTTTAGTTCTTTTTGCC
TATTGATTAAACTATTTTGATGGGTTAACTTATTCGAGTTCGAAATGAAT
AGTTTACCTTTTCCTTCTAAACAATGATTTGTGTAGAATTTAAGCACCCC
AAAGAAGCctacattttgattttgttgtggttTTAGTTTGTCCCAAGCTT
TCAAACCTTATTTGTGTGAAAGGAGACATATTTTCAAAGAGTTTACTTTA
ATCATATTTCACAAATAGTGTTTTTACCAGTGTAAATAATTATTTGTGGC
CTGAAAGGGACTTTTCTTAAAATCGAACTTCGTTTTGGACTTTTCACTGC
CAGGAAATTCGAGTTTCATTTTGTGATAGTATAACTAAATTCTAGATGAA
GTTTTTCTTTGTCAGAATCGATTTTCATCAGCGTTTTACAACTAAAGAGC
ATTTCatttatatccatacatgggattggacgaacatttccagggtggtc
tccaaaaaaagaaaattccggGGGGTCCCAGGTTACTTTACGCACTTTTT
TCAGGGAGTTGTTTTCCAAGGGGAATTTCTTTTGGGCATGAATAATTGGC
TCGTTTATTTTCTAATGTTCAAAGTTTTGGAATTTCCAGGAACCTGATTT
GATTTTCCAGGGggggattcaaattattttaaaatttcaaaggggtaaaa
aattgatttcagttcGTCCTCTCTCAATGTCTTgtttaaaaaagggtttt
ttgatGGACGATAGAATcctttttcccagatttttgcaaattttgccatt
atTTCAGGAAATATATGTACAATTTCATTAATTCTTTTGGCTTGAAAAGA
TTCGTGGTTCCTGTATGG
Run BLAST on NCBI

transcript from alignment at sc0000023:510260..523276-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00002878 ID=TCONS_00002878|Name=TCONS_00002878|organism=Clytia hemisphaerica|type=transcript|length=13017bp|location=Sequence derived from alignment at sc0000023:510260..523276- (Clytia hemisphaerica)
TATGTTGCCTTTATCATTTATAGAAAACAAGTAACAAAGCTACTTTTCAA
ATATATTTTATATTTCAAAGCTACTTTGATTTTGACCATGACTTCTCTTT
CTACAAAGTTGAAACTTTTTTCTATTTTGGTCTCTGGACCAATATTTGAT
ACTGTGAAACACCTTGAAGATGCAACCAAAACAATGAGTTAGGCTGGAAA
ACTTGGAAATAACGAACAATGTCGAATAACATATTTTTCTGTTAGCTTTC
AACTTGAAAAGTATTTTTACAGAAAATTACTTCGACGCGTTCTTTCGATG
ATACAAAATACATCCATGCCAGAGAAATCTGTGTAAGTTTTCACTTCTGC
CATTGAAGCTGATAGAAATCGTTTCATCCAGCCACTGACTTATCGAACTA
AAACATTAAATCATCATTGAACTACCCACGAACCTGCACGAACCACGAAC
ATTTGATATGCAAACTCTATAAACATTTCATCACTTATTTGCTCTTGAAA
AGTAGCCTAGAAAGACTTCATCTAAAAGATACAGCAAAAAGGTACAGCAG
AACTTTTCCAAAGTACTCCATGCCAGTACGGTTAAGTTTTGATTTCATTT
CGAAATGCTGGATGACTGAGACAAATAGCCTTTTTAACACAGTTAATCTT
TTAGAAGTAGTTTTGACCTTCATCAAGTGTTTTCAAACAACCCTTATATA
CATTTTTATCACAAAAGACTGAGCAAGAAAATTGGAATAGTACTGAAATG
ATTAACTTCACAACATTATCAAAAAGAGCTTTGTGACAATTGATGAATTA
ATCCTGATTGCCTGACATCGTTGGTTCTACCCTTGCGTAAAACCGCAGTC
AAAATGTTGTTACCCAACCACTTCCTCTTTTTCATTCTGGTCTGCAAAAT
ATTCATCGTAGTCGAAACTCTGTGTTAGGGATGGGAAAGATATGACATTA
ACTTCATATAAAGATTACTTAGATAAAATATTATTTAAAACATGGATCCA
AAAATTTTGTCCTTTGAAAACAAACGGGTTATTAAAGCAAAAAAATAATC
AAGGAGACAAACTTAATTGAAGACGGTATGAAAGGCATAACAATTTCAAT
AGCCCACCTTTCAGCACAACAGTTTGAATTGTTTGATCTCAAAGTTAGTA
TTATATATTTCAACTTTGAAGCTCCAGACTACCTAAAGGCCGGTGTCCAC
TTTCGCGCGAAGCGCGCAAAACTTTTCACGTTATTTGTAACGTCATTGGT
TGATCGAAAAAAGAAGCAATTCCATTGCTCAAAATTGACGTAACGGTTGA
CTTCCTTCAACTTTTTTTTTGTTTGCGCGAAAAATTTTTTTGTTCGCGCG
AAACTTTTTTATGACGTAATCTTTTCTTCAGGCAAAAACGATTAAGAAAA
ATTTTTTCGCGTGGAGACCGGCCTTAAGGGGCCTAAAATGACACTTATAC
TCTGTTTTTTGTGATGAAATTGCCCAGATTTGTTGTTAAAAAAAATCCAA
ATAATTATGAGATAATTTTTTCAAAATTTTCGGAAAAATCATGAAAAAAG
AGCGAAAATTTGAATATTCCACTCTCTAAATCATTATTGACTGCTTTGAG
ATTTTGCATGAATCATTTCTAGTTATATAGTTACACGTTTGCTAAGTTAA
AAAAAAAATCGAATTAATAGTTTTTCGAGATATGACATTTTCGTGACTAA
GTTCAGGCTAGCAAAATCGACCCCTAAAAGACCCCCTGTAAAACCTGAAA
ACCACCGATTAAGCCCGTAAACCATCTGGTTTCATAAATACTATATGTTA
AGGCACCAAAAAATCAATATGGCGTATTTTCTACCAAAAGGTGGCGCGAT
GCTAAGTCATTGCTTGGTCTAATAGACTAGTAGCTGATTTTAAATCTTTA
GGCTTGAACTGAGAGAATTAACAAACAGGAGGCTTATTGTATGTAGTGTT
CGAAAAAAACTCAATTTCTCGGCCAAAGTTACGTAGGGGAATGTTAATGA
ACTGCGACAGTGACCCGACGACCAGAAAACAGCCCTATCGAAATAAGTAA
AGACAAGAGGTTTTCCATACATAATGTCCTTACAAATTATTTCTTTTGAT
TGTTTTTTGAAACTCGTAGATCATAAATAAATTTTGTCTTCTTTTCCCTT
TGCAGACGTCACCGTCCTATGATCTGTCAATTGTACCGTTTGAACACTGA
TACAGATGTTGAAAGCTCATCGGAAGTCGAAGGAAAAACAAAATACAATC
CTTCGTTTGAGGGCAAGTAGTTAAGCTCCGCCCAGTCAAGTCGAGCTACC
AATATTCAAGTATCCTATCTCCTCCACATCAGATCCACCCTGACCACCCG
CTAGGTAACTTCCGGGACATACCATCTTGGAAGCGAATCGGATCCAGCTT
TCCTTCAAATCCACCGAAAAACAGCAGCCGACCTCCCTCTCATCACTTGG
CATTATGTTTTGGTAAGTATTTGATATCAGCTTTATCCTGATTAGATGAT
TGGAGAAATCATTATCGATATCTGTACACCCCTGTCTCAATGACCATTCG
AACATTTCCCCTATCATTCTTACTTGGGGAAAGTATTTGGACTCGCTTGT
CTAAGTGACACGATGAGAATTCCAATTCACCCTTGTCTTGCGATCCACTG
ATTATTTCCGTACCGTATGTCCTGCTTCGATATCAAATATTAAACAAAGA
AATATCGTTAAAAAGCATAACTAAAAAGTACACTATGTAAATTTTCAGTG
TATTTTCACTTTCATCTTTTATTCCCTTCAGATCTCATCTTTCATTCGAA
ACTTTAAAGAACGCTAATGGTGAAAGTGGAGCTACAAATGGTACTCAAAG
ACGTGTATATTTTCAATGTCTTATCACCAATGACTTACACCGATTTGAGA
TACAATCATAGACGTTTCGAATGTTTCCGAGTAAGTTTTTATTGTTAAAA
CCAGTACCGGTGTTTTTGTAAGGGGCCAACAAGGTGTTGCATATTTCTTG
TACGTAGATTTGACAAGCGTGGAGTGGCTTTTTTCTGACTATTTCTAAAT
AAAGCATGACCAGACCTATTTCTTGGCATGCACTCCTCCTTTTAAATTTT
AAGCCTCCTACACACCCAATAACAAAAATTTGTTAGCGTTGAAATTATTC
CTCCCGTCTCAGGGATCTTTTAAGATATAATTCAGAGAGATCAGGAGAGA
TAATTCCAGCTTTAGGCCTCAAAAGATTTTGACAAAGTTACTTCTTAAAC
GAGACAGTAAGATTCACAGTGTCCTTTTCTATTTCAGATTCATCAATAAT
GAATTCCAATGGAAAGCCTTGATCAGAAAGTATTAAAACGCGTTCACCAT
ACATTGAGTTAAAATCACAATCATGTTGACCAAAGCGCACCTGATGCTTT
CAACGAATGGCAGTCTTCAATTACACTTAACATCCGCTATCAAGAAATGT
TTGGGAAACGTTTCGAAACAGAATTTTAGTTGCGTCCAAAGAAATACCAG
GTAAATAAAACAGTTATAGACACCCCCTTCTCACAAACTTTTTCAGCCAG
TGGTGGTAAAATTAATGGACTGAAACTCGAAGGGGACTGATATTCCTATG
TTTTTTTATGGAGTTTGAATAACATTATTTTTAAGCCATAAAATTAAGTC
GGGATGGAAAAAAATAGCATGATATTTTTGGGTCAAGTTGGAGTTTTTAC
AAGATACTTACAAATCAGAGATGCTTAGAGCATTGAACTTTTTCCTATCA
TATACAGTAGAATTGATTTATAAAATACACAACTATGCCAACACTCCCCA
AAGTATCTACATTCTCAGCTCCCGTGGTGCCGAAGTCCCGAGTTGAATAA
TGCCAACACTCGCCAAAGTATCTACATTCCCAGCTCCAGTGGTGCCGAAG
TCCCGAGTTGAATTATGCCAACACTCTCCAAAGTATCTACAACCCAAGGT
CCCGAAGTTCCTAATTGAATTATGCCAACACTCTCTAAAGTATCTACAAC
CCCAGGTCCCGTGGTCCTGAAGTCCTGAGTTGAATTATGCCAACACTCGC
CAAAGTATCTACACTCCCAGGTCATCTACACTCCCAGGTCCCGAAGTCCC
GAGTTGAATTATGCCAACACTCTCCAAATAATCTATAACCCCAGGTGCCG
AAGTCCCGAAGTCCCGAGTTGAATTATGCCAACACTCTCCAAAGTATCTA
CAACCCCAGGTCCCGTGGTCCTGAGTTGAATTATGTCAACACTCGCCAAA
GTATCTACACTCCCGGTTCCCGAAGTCCCGAGTTGAATTATGTCAACACT
CTCCAAAGTATCTACAACCCCAGGTCCCGAGTTGAATTATGCCACCACTC
TCCAAATTTTCTACAACCCCAGGTCCCGTTGTCCCGAAGTCCCGAGTTGA
ATTATGCCAACACTCGCCAAAGTGTCTACACTCCCAGGTCCCGAAGTCCC
GAGTTGAACTATAACAACAATCTCCAACGTATCTACACTCGCAGGTCCCG
AAGTCCTGAGTTGAATTATGGCAACACTCTCCAAAGTACTACACTCCCAG
GTCCCGAAGTCCCGAGTTGAATTATGCCAACACTCTCCAAAGTATCTGCA
ACCCCAGGTCCCGTGGTCCCGAGTTGAATTATGCCAACACTCTCCAAAGT
ATCTACACTCCCAGGTGCAGTGGTCCCGAAGTCCCGAGTTGAACTATAAC
AACAATCTCCATCGTATCTACACTCCCAGGTCCCGAAGTCCCGAGTTGAA
GTATGCCAACACTCTCCAAAGTATCTACTAACCCCAGGTCCCGAGGTCAC
ATTCTCAACAGTATCTACAACGCCAGTTCTCGAGGTCCCGAGTTGAATCA
TTTCAATATCTACAATCCCAGGTCATGAGGTCCTGGGTTGAAATATCTTA
TATTCCAAAACAAAATCTCTACTAAAAAAACACTACAACATTTAAAGCCA
AACTTTAAATCGGCAGTCAGTAACTGGCATACTGATACTGGCAAACTGAA
CAGCCATAATTTGAGGGCCTACTATTTACCCTCAAAAGAATCTTCCCTAG
GTTTTTTCAACTATAATCAATTCAAATATCCAAAATTCCAAAGAAAGTAA
GTCCAATGTTCGGTCAAGTCCAGCAACGTTTTTATCCAAAATGTAGTCGA
TATAATCCAATATATTTTAATGATTAAGTAAGTTTTCCTTGAAGTTATCC
AGTTTTTCGTGAATGTGCTTCTCGATTTCAGATTTTCTTCTCATTCGACC
ATGCTGATGCATAACACTGACCAAATCAAAAATGTTTTTTTTTTTTCAAC
AAAAGAAGTAAAAACAAACAGTTACTATAAATAAATAGTAAAAATGTATT
TTTAAATTTATTTTGATCATTTATATTAAATTCATTTAGACTAATCCTTA
ACAAAATGGACAACAATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTT
CCGCGGTGGAGAAGGGAGAACTGTTTGTTGATACGACTAGATATTTTTAC
GTGTGTTGCTTAAGAGCCATTTTCTTAGGGATATGGACAACGTCAGGAAG
AAATTTCCTCAGAATTGCTTCATTTTCAAATATTTTGTTCAAAACCATGA
TTGATGCAACTTGTCAAAACCATGATTGATGCAACTTGTCAAAATTTTGA
ATGTTTGAAAATTCATACCAGATAGTTGGAATTCGGTTTAGGACTTTCTT
TTTTCTTTGTAATATAATATGGAACTACTATTTGATACTTCACTTGGTGA
AAATTTGAGTCCTGAAAACCATGGGCTAACTTAAGAAAAACTAAAATATT
TTAGAGGTCATTTTCTTGCAAGGCTCTCACTACGACATGTTGGTTTTTGG
ATTTTTAGTCGTTTTTGTAGTCTTTAGTAGATATGTTTTTTTTTGGTAGT
GAAGAAGTGGGTTAGGATGGCGGCTTAAAAATGACCTTTAGTGAAAAATC
GCCATTCTTCCCCAGTCCATTTAAGCCAAGGTCCTCAGTTGTGAGGTGTT
TATTAGGTTGTTTTGGACTCTCCAGACAGATATACGTTTTGACAGTCGAA
AAAAGTCCAAAGATTTCCATGTGGTCTAGCCTCGTTAGACCTGTTGAAGG
CCGAGAAACTAGGCTTTTTAGCTTACGCAGGATTGCCCTTAGCAATCTTA
GTAAACAATTACATAGTGACAGAGATTACAAACCACGGTACGAAATTGTA
CCGATTTTTTGAATGGCCGCCCTGTGATTTATGTTGTTTACTATGTCTGT
GTTTTTCATGTAACTAAAGTAACAATTTGCAAATTTACGAATCATTTACA
TCCTGTTCCTATTTTATTTTAATTATAGTACCCGGGATGATATTCTCAAT
GGGATGAATTTGGTGACCATGGAAAAAGTTGTTGCAGCGGTTTGCGAAAG
ACAACCTGACCAATAATACACTGACAGTCAAAGAGAAAAGAAGATTATCC
TTAACTATCTCTTGCTCAGCAGGTGAGATGAGGTTTCTGCTTCAATTGAT
GGATACACTCAACATTACATTTGAAAATTTGTTCTTTTGATAAAATGTGC
ATTATTTGGTCCTAACATAAATTGCATTTTCCTAAACTTGAAACGCTACC
GTTCCTCAATTACATGTTTTTTTTATAAGCATAACGTTTATAAGCATATG
CAGGCTCAGTTTTTGGTACCTAAACAATGGCTCTATTGTTTGAGAACAAT
AGAATGCTAAGCATAATGCGAGCCTGACATAGGGACAGACACTTGCCTTT
AAAAAAAAACATGTACATATTATAAACACTTTGAAAATTAAGAATTTTGT
GAGCTTCGATTAAGATTTTAAGATACAGAGACGAAGATAGATCATCCATT
AATGACGAAGACATAGCTGTGGTTTTCTTATACTATATGGTACCTTTGTA
ACCCTTAGTTAGATTCTTGAGGTTTGACCAATGAAGTAAAAGCCCGAAAG
ACTAGACGTGAATCTCCTACATAGGATTTGAAGCCGCTAAACCCTACCTA
AAGCTACACGGCCTTGTGCGTGGCCCGGTCCGTCGTCAAATCTAGCGATG
TATATCATAAGTTTCATTTTTTCTTACTTGGGAAAGGTTAATGATTCGCT
TCTAGCCCTTCGGGATTTTACTTCATTGGGTGTGACATTTTTGTGCTCAA
TATTCAATGCAATCATTTTCCGAAATTCATATTTTTCTAGGTCAGGGGAA
TGAGAAGACAGACCAGTACGAAATATTGCGAACAAGAGATAACGAGTCTG
GTAGATTGACCGAAAGATTCTAATGGTGAGCTTCGTGTATTGCTTGTATT
ATTACTCGTTGATCCAAAGAAATGGAAAGAAATAGAAAAAGCGCTTCTCG
AAATATGGCTCGTCATATTTCAAGTCCTTTGCCCTTAAGGGAGTTTTCAG
TTTTGGGTTAATGGATTTCTTTTGTTGTCGCTATAAAAACTTTGTATAAT
TGGCGTAATGTGACGACGTCATCAATTTTTTTTTCCAGGAAATTTGTGTC
ATGATGGAGAACATCTGTACCAAATTTCATGACTGTAGCTCTCCTAGATA
AAAAATAATCGAGGGTGGTAGATTCTACCCCCTCCCCCTGGGGATACAAA
AGTCAAAAAAACTTGGGCTAATAGGGTTAAGGGAGTTTGTTTCGGGTTAA
TGGATTTCTTTTGTTGTTGCTATAAAAACTTTGTATAATTGGCGTAATGT
GACGAATTTTTTTTGTTTCAGGTCAAATAATGCGAGAACATTAGGGGCTT
ATAGTTTGGAGACACCTCTTTCTTACCAAAAGATACCTATATTTTCTTGC
TCAGAATTTTCTAGCGATTCTAATGATATAACGGCATCACGACGGCATAA
TTAGATAAAAAGATAAAGTGTGAGAAAAAAAGAAATTAAATCTGTTTTTA
ATGAATTTCTTGCAAATTTTCTCCAAGTAACTTGATATCATTGTGATGAA
AATTTTTCTAACTAACTCAAGTTGGCTTAAAATTTGTTACTGGATGCTGA
AAGTTCAAGGGTAATGGACCAAAAACAAAAAATATCGATCCACTTTTGTA
AACATATAGAAACCAGCTCTCTTCGCAAGACGAGCGGATTTTTTCTGAAC
CTTTTCTAATTACCTAATTAAAGCTAAAACAAAGGAGTTCTCATGGGAAC
GGTCAGAACATTTTGGGTAATCAGAGAAGCGCTTTTTCTATTCCTTTCCA
TTTCTCTGGTTGATATTTCACTCAAAAGATCCAAGCATAGAGGTAATAAA
AAATAGATGGAGTAACAACTTTTCTGTAATAGCCAGAGAAGTCATAAAAC
TCTTTAGAAATTTCTTTCAAATCGGCCTCCTTTGATTNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNTCATTCTTTCAAAATAAACAAAAATCGTTTAATTCTGATAA
ATCTACAAGTCAAAATCTTCATTTTAATGAAAACCTCCGTTTTGGGGGCC
GTCTCCGTTTTATGGGCCATATACTGTATTAATATTGTTCAAAACATGGC
CGAGTTTAATTTTTGAGGAAAATTTTTTTCCGGCCGAAAATGCCGTAAAT
ATGCCGGAAATCACCGTTTTTCTGGATTTTCATTGGACTTTTTCCTTACA
ATTGGTTGTTTTTTCATTCAAAAACATTATTAATAGCAATGCGCCCACCA
TCAAGCATGTTTCAATTGTCAATAAAACTGATTTTTGAAGCCAGAACTCT
CTAAAAATCGCTGGAACAGCCAATTTCTTGAATTTCTCGAGCTGTACTTT
ATATTTTTTTATGAAATTTTGCACACTGATGCAATATGACAATACCTAAA
AAGTGACGGAGCCCGATTTTAGAAAAACATTTTTTTCTGGCCGAAAATGC
CGGAAATATGCCGGAAAAACCGGTTTTTTTACATTTTCTCGAATTTTCAT
CAAAAGTTTTATCTGATTTTATTGCAGAAAGATGCGTATTCCTAATGCTC
AAAACATGGCTGAGTTTGATTTTTGAGAAATTTTCTTTTTTGGTTGAAAA
TACCGGAAATCGCCGTTTTTGCAGATTTTCGTATGATTTTTTCCTTGTTT
TTCTATGTTTTTCACACAAAAGCATTATTGAAAACAATGCTCACCATCAT
CAACCATGATTCAATTGTCAATAAAACTGATTTTTGCGACCAGAACTTTC
TATTTTTTTCCCCTACAACCCTTCCCTATCCCCCCATCAACAATCAATGA
GAATTTATTGCGTTATGCATTTTCGCTAAACGCTGTATTTTTTGACTGAT
TTTTTTCTCCTCGAATTGCTATCCAACTTTCATCATCAGGTAGGTCCATT
CAGCATCTAGCTTGTTATTTGCTTAATGGTCAAATAGCCATGTTTGGACT
TTTTCTTGTTGACTTGAACCAAAATACTAACATGTACTAAACCTTCGCAG
AAAAGACAGTACCGTTCATTGCGGTAAAATTTACCGGTTACTCATTAGAT
CTATGCACCTTACCCAACTTCTATGATGTCATTCTTTTTTTTCCAGTCAG
ACGAAACGAACTAAAAGCGTCGCAGCGCCCTCTCCCAATCAACTGTTGTA
TATTTTGAGTAAATGAATATCTACGCTCATGGTATCAAGCATGAAGTTTA
GAGCCCGATGATTACATACGGCTGACGGTATTTATCAGGTAAATAACTTT
GTGATTACATTAGATTTCAACAATAACGAGGGGGTTTATCTAAAGAATCC
TGCATTACTAAAAATAGACAAAAAGAACGACAAATTTCATAAAAAACGAC
ATATTTCGCCGTCCACAACTCCGACCGAAAGTAACTGTACCACCCCTAGC
GATTCAGTCCCTTTCGTTTATCACGGGAATTAATTACATGTGATGTAAAA
GAACGACAAATTACGCATGCGTGTTACAATGCAGGATCCTTTAGAGGAAC
AGACTGTAACCTACTAACGCGTGGTTACTGAAGAGTGATCGAATTGAAAC
CTCTTCTTTAAAAGAATTTCAATTTTGACGTACCTTGCATAGGCTGTATT
TTTGTAGACCTAATTCGAAAATGGCAACAAAATATCGAAGAAGAAAAATA
TGAAGACTTTCTTAACTACCTGAAAGTTCAAAAGTTTTCATTTTAAATCA
CCAAATCTTTCTTTTGATACAGGGTGATGCAATACATAACTCCAAGCAAT
CGTCAAGCTGCCATGTGGGAATGCTCTTCCTCGACCTTGGAATGATCTCT
AACAGGTTAGATTGGGTTTTTTGTAACTGCAATTATACCAATGTAACTGC
AATTTTCCAGTCTCTTACTCTCTATCTGTTTTTATATGTTCACTTTAGTA
CATCTAAAACATGATGCTAATGATGTTAGAAGTAAAGAGAAAACAAAAAA
TATAATTACAGTCGAAGGCCTTAACAATAAAGGGTCGTTACGAAATCCTG
TAATTCTCATTTTATTGGATTCTTAAGCCACGATGTTTGTTCAATTACCA
CTCTCGAATTTCTCAATTAGATCTTCTATTGTGAATGATAGTAGAATCGA
ATCTTCCCTTCAATAAGTCCCACATTGATTTGGTAAATTGTTAATTGTAA
ATTGTTAATTTTGAGTTTTTCAAATTTAAATATTCTCTCTATCCTTTATT
CCAGGATACGAATTTGTGGCATGAGCATCCCCATTATTGTGGCTTCAACA
ACCTGGATTCGATTGGTGGATGAAATTTGTGATAATGATGGAATTGTTTT
GACATAGCTGATGGATGTTGTCTTCTCCGTAGATGCAGTTACTTGCTTGG
TGATTGTTGCGAACCATTGGTGTATTTATAAGAGTATTCAATACAATCGT
TGAGATATGGTATGATATGCTGATGGATGGATTATCTAGAAGTGATTTCT
TTGGTTGAAAGATGACCTCTTCTAGCCCAGTCATCAACCGTGGCCAATGT
TGCTTGGCCAATGTTGCTTGGCCAGTGTTTCAAATCAGATCGTTCTATTT
TTGGAATGAAAAATCGTCATTTGAAGAGCGACTGTTAAATGAAGTTGTCT
CGATATCAATTCTGTAATATTGGTTACCAATTCTTTAGTTCTTTTTGCCT
ATTGATTAAACTATTTTGATGGGTTAACTTATTCGAGTTCGAAATGAATA
GTTTACCTTTTCCTTCTAAACAATGATTTGTGTAGAATTTAAGCACCCCA
AAGAAGCCTACATTTTGATTTTGTTGTGGTTTTAGTTTGTCCCAAGCTTT
CAAACCTTATTTGTGTGAAAGGAGACATATTTTCAAAGAGTTTACTTTAA
TCATATTTCACAAATAGTGTTTTTACCAGTGTAAATAATTATTTGTGGCC
TGAAAGGGACTTTTCTTAAAATCGAACTTCGTTTTGGACTTTTCACTGCC
AGGAAATTCGAGTTTCATTTTGTGATAGTATAACTAAATTCTAGATGAAG
TTTTTCTTTGTCAGAATCGATTTTCATCAGCGTTTTACAACTAAAGAGCA
TTTCATTTATATCCATACATGGGATTGGACGAACATTTCCAGGGTGGTCT
CCAAAAAAAGAAAATTCCGGGGGGTCCCAGGTTACTTTACGCACTTTTTT
CAGGGAGTTGTTTTCCAAGGGGAATTTCTTTTGGGCATGAATAATTGGCT
CGTTTATTTTCTAATGTTCAAAGTTTTGGAATTTCCAGGAACCTGATTTG
ATTTTCCAGGGGGGGATTCAAATTATTTTAAAATTTCAAAGGGGTAAAAA
ATTGATTTCAGTTCGTCCTCTCTCAATGTCTTGTTTAAAAAAGGGTTTTT
TGATGGACGATAGAATCCTTTTTCCCAGATTTTTGCAAATTTTGCCATTA
TTTCAGGAAATATATGTACAATTTCATTAATTCTTTTGGCTTGAAAAGAT
TCGTGGTTCCTGTATGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001564XLOC_001564Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00002878-exon-sc0000023-1575043694:522945..523276TCONS_00002878-exon-sc0000023-1575043694:522945..523276Clytia hemisphaericaexon
TCONS_00002878-exon-sc0000023-1575043694:520815..521121TCONS_00002878-exon-sc0000023-1575043694:520815..521121Clytia hemisphaericaexon
TCONS_00002878-exon-sc0000023-1575043694:520347..520495TCONS_00002878-exon-sc0000023-1575043694:520347..520495Clytia hemisphaericaexon
TCONS_00002878-exon-sc0000023-1575043694:519777..519989TCONS_00002878-exon-sc0000023-1575043694:519777..519989Clytia hemisphaericaexon
TCONS_00002878-exon-sc0000023-1575043694:516305..516448TCONS_00002878-exon-sc0000023-1575043694:516305..516448Clytia hemisphaericaexon
TCONS_00002878-exon-sc0000023-1575043694:515502..515586TCONS_00002878-exon-sc0000023-1575043694:515502..515586Clytia hemisphaericaexon
TCONS_00002878-exon-sc0000023-1575043694:512489..512630TCONS_00002878-exon-sc0000023-1575043694:512489..512630Clytia hemisphaericaexon
TCONS_00002878-exon-sc0000023-1575043694:511922..512004TCONS_00002878-exon-sc0000023-1575043694:511922..512004Clytia hemisphaericaexon
TCONS_00002878-exon-sc0000023-1575043694:510260..511522TCONS_00002878-exon-sc0000023-1575043694:510260..511522Clytia hemisphaericaexon
TCONS_00002878-exon-sc0000023-1510915933:522945..523276TCONS_00002878-exon-sc0000023-1510915933:522945..523276Clytia hemisphaericaexon
TCONS_00002878-exon-sc0000023-1510915933:520815..521121TCONS_00002878-exon-sc0000023-1510915933:520815..521121Clytia hemisphaericaexon
TCONS_00002878-exon-sc0000023-1510915933:520347..520495TCONS_00002878-exon-sc0000023-1510915933:520347..520495Clytia hemisphaericaexon
TCONS_00002878-exon-sc0000023-1510915933:519777..519989TCONS_00002878-exon-sc0000023-1510915933:519777..519989Clytia hemisphaericaexon
TCONS_00002878-exon-sc0000023-1510915933:516305..516448TCONS_00002878-exon-sc0000023-1510915933:516305..516448Clytia hemisphaericaexon
TCONS_00002878-exon-sc0000023-1510915933:515502..515586TCONS_00002878-exon-sc0000023-1510915933:515502..515586Clytia hemisphaericaexon
TCONS_00002878-exon-sc0000023-1510915933:512489..512630TCONS_00002878-exon-sc0000023-1510915933:512489..512630Clytia hemisphaericaexon
TCONS_00002878-exon-sc0000023-1510915933:511922..512004TCONS_00002878-exon-sc0000023-1510915933:511922..512004Clytia hemisphaericaexon
TCONS_00002878-exon-sc0000023-1510915933:510260..511522TCONS_00002878-exon-sc0000023-1510915933:510260..511522Clytia hemisphaericaexon
TCONS_00002878-exon-sc0000023-1491911889:522945..523276TCONS_00002878-exon-sc0000023-1491911889:522945..523276Clytia hemisphaericaexon
TCONS_00002878-exon-sc0000023-1491911889:520815..521121TCONS_00002878-exon-sc0000023-1491911889:520815..521121Clytia hemisphaericaexon
TCONS_00002878-exon-sc0000023-1491911889:520347..520495TCONS_00002878-exon-sc0000023-1491911889:520347..520495Clytia hemisphaericaexon
TCONS_00002878-exon-sc0000023-1491911889:519777..519989TCONS_00002878-exon-sc0000023-1491911889:519777..519989Clytia hemisphaericaexon
TCONS_00002878-exon-sc0000023-1491911889:516305..516448TCONS_00002878-exon-sc0000023-1491911889:516305..516448Clytia hemisphaericaexon
TCONS_00002878-exon-sc0000023-1491911889:515502..515586TCONS_00002878-exon-sc0000023-1491911889:515502..515586Clytia hemisphaericaexon
TCONS_00002878-exon-sc0000023-1491911889:512489..512630TCONS_00002878-exon-sc0000023-1491911889:512489..512630Clytia hemisphaericaexon
TCONS_00002878-exon-sc0000023-1491911889:511922..512004TCONS_00002878-exon-sc0000023-1491911889:511922..512004Clytia hemisphaericaexon
TCONS_00002878-exon-sc0000023-1491911889:510260..511522TCONS_00002878-exon-sc0000023-1491911889:510260..511522Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000023supercontigsc0000023:510260..523276 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.358378	1.13404	0.815463	0.357777	0	0.289529	0	0.45014	0.16784	0	0	0.508498	0.28241	0.527827	0	0	0	0	0	0	0	0	0	0.000398645	0.0799244	2.24356	0	0	0.17418	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00002878 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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