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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00002846 ID=TCONS_00002846|Name=TCONS_00002846|organism=Clytia hemisphaerica|type=transcript|length=1656bp
gGAATAATGAACAGTTTTCCCGAACGGAAGACACGAGTCCAGTTCTTGCA
TAAATACTTTCAACTATTATTGCACAAAAAGTTCCCAACTTTTGCTAGAG
GGTGACTCAAATTCGGGCAAAACCAGCTGGGCTGCCGTATTCAAAGGTTT
AATACCAACAGAAAACATCGCTGGAGTCACCCAAGAGGGAAGATTTGCAG
GACATTTGATAAACAATCAAACCGAGTTGGTGTTCATGGACGAGTGGACT
GTTAACAGTCTTAGTTGTGAAGATGCAAAGCGTATACTTCAAGGTGGTTT
AATCATGCTCTCACAGAAACACGCCAGTGCAACAAAGGTGATGTACAAAA
CGGGTTTTTTATCACTACGAATGTGCTACCAAACTTTGGAATATCGAAAG
ATCATGACGCTGTATACAACTGGCTGAAGGTGTTCTCAACAAATCCGTTA
CCAAAGAATGATTCCAGTGTAACAAGTAAGGCATTATAGTAAACTACTAG
TAAACTACGTTTGTTAAATTGAAGCAATTTATTTTGGAGGACGAACTATC
ATGTTCTCAGTCTGCCCATGAACTAATACAACAGGAAATCGTCAGAGACC
CGATTGTGGATGACGAGGATATGGATTTCTATTTTCTTGAGTCCGACGAG
GCAACTCCAGCTAGGTGGACTAAAACGCACAAACTTTTCTACACGGAGAA
AGAAACTACTCATTACCAGTTGTGTATCAATACTTTGAACTATATTTCTA
ACGAGGAATGGAAGAAGGTGCCTATCAACCAGGAGGACATTAAGAGGTAC
GAGATAAGAAGAAAACGCAAATGGCGTGGCGGAGACACCTTTTACGAGGC
TTGAATGGCACGGCAGGACACGGTGCCTGAAACTCCGTTAAAGGATATGC
CCGCCCCAAGTGTTTCAACCTCCACCCCTACTAATGTAGCTGAGCAAAAC
TCTAACTCTTCTAGTCCAAAAAAAACGACAGTTCCCAACCGAGTGTTAAA
CTTCAGTCCTATCAAAAGGAAAAAGTGTTCCCAGAAAAGTTCTTCCACCC
CATCAAGCTCGAGTTAAACCTTTGCATGCTGCTCACCGCCGAATTCTTCA
AAAAGCTCTCCTCTGAATCTATTGAAGATTCTTTACAGCGACAATACAAG
TGATGACGACGATGAAGTTCTTCCATCCCTGAAGCGGAcgaagaaatcac
aaaaatcgGAAACGTCTAATGCAATCGATAGTGGCACGTCAACGGAAAGC
GCTTCGGACGAAGATAAAAAACCGCCACAAATTAAAGGTAAAAAAACGCC
CTCTGTAATCACGGACCCAGTCTCCTTGATCACAACAGACGAAGAAAAAG
GAGGCGAGGTCAAGCCAAAGATCCGTTTAAAACCTGTACGCAAAACTTCC
TCAGAGATAACAAATCCAATCGAAATACCGGATTCTGATGGAGAAGATTT
TGTTCCAtactttttatttcttttaaaccCTATAACTAGATTTATAAATT
CTTTTGTAATGTCGTGTTATTGTCATTAtattatataaatataaatttct
gAGGAGCCCCCAAGTCTTACTTGTGTAAACTACAGCCTCTGACAATCACA
ATTcaccttttctctagaaaataagtaacaaccaggaacaacgtgacact
aacggg Run BLAST on NCBI transcript from alignment at sc0000023:81027..83076- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00002846 ID=TCONS_00002846|Name=TCONS_00002846|organism=Clytia hemisphaerica|type=transcript|length=2050bp|location=Sequence derived from alignment at sc0000023:81027..83076- (Clytia hemisphaerica)
GGAATAATGAACAGTTTTCCCGAACGGAAGACACGAGTCCAGTTCTTGCA
TAAATACTTTCAACTATTATTGCACAAAAAGTTCCCAACTTTTGCTAGAG
GGTGACTCAAATTCGGGCAAAACCAGCTGGGCTGCCGTATTCAAAGGTTT
AATACCAACAGAAAACATCGCTGGAGTCACCCAAGAGGGAAGATTTGCAG
GACATTTGATAAACAATCAAACCGAGTTGGTGTTCATGGACGAGTGGACT
GTTAACAGTCTTAGTTGTGAAGATGCAAAGCGTATACTTCAAGGTAAAAT
GATNATGGACTGTTAACAGTCTTAGTTGTTAAGATGCAAAGCGTATACTT
TAAGGTAAAATGGTGAAGTTTATTTCAATCTTATCTTCGAGAAGTAGACT
ATTGGCATATCGATTCCTGTGCAAAAGTGAATTTGGGCGTGTCTCGAGTA
AAAACATTGACAATTTCGGTTCAATCATTTCTATTTTAGGTGGTTTAATC
ATGCTCTCACAGAAACACGCCAGTGCAACAAAGGTGATGTACAAAACGGG
TTTTTTATCACTACGAATGTGCTACCAAACTTTGGAATATCGAAAGATCA
TGACGCTGTATACAACTGGCTGAAGGTGTTCTCAACAAATCCGTTACCAA
AGAATGATTCCAGTGTAACAAGTAAGGCATTATAGTAAACTACTAGTAAA
CTACGTTTGTTAAATTGAAGCAATTTATTTTGGAGGACGAACTATCATGT
TCTCAGTCTGCCCATGAACTAATACAACAGGAAATCGTCAGAGACCCGAT
TGTGGATGACGAGGATATGGATTTCTATTTTCTTGAGTCCGACGAGGCAA
CTCCAGCTAGGTGGACTAAAACGCACAAACTTTTCTACACGGAGAAAGAA
ACTACTCATTACCAGTTGTGTATCAATACTTTGAACTATATTTCTAACGA
GGAATGGAAGAAGGTGCCTATCAACCAGGAGGACATTAAGAGGTATTTGT
TATTATTTCTCTCAAAGTGTGATACTGAACCTGGAAATCGTTTTTAAAAG
GTTGATTTGCCAAGTTTTACCATTGAATGTATTATGGACTTGAAATTCTC
ATGCTCCATGCTCCGATTGAAACATAAGGAAACTTCCAGCACCACGAAAC
TGTGATGTTATATTGACAGCTTATTTCATTATCTTTTTAGGTACGAGATA
AGAAGAAAACGCAAATGGCGTGGCGGAGACACCTTTTACGAGGCTTGAAT
GGCACGGCAGGACACGGTGCCTGAAACTCCGTTAAAGGATATGCCCGCCC
CAAGTGTTTCAACCTCCACCCCTACTAATGTAGCTGAGCAAAACTCTAAC
TCTTCTAGTCCAAAAAAAACGACAGTTCCCAACCGAGTGTTAAACTTCAG
TCCTATCAAAAGGAAAAAGTGTTCCCAGAAAAGTTCTTCCACCCCATCAA
GCTCGAGTTAAACCTTTGCATGCTGCTCACCGCCGAATTCTTCAAAAAGC
TCTCCTCTGAATCTATTGAAGATTCTTTACAGCGACAATACAAGTGATGA
CGACGATGAAGTTCTTCCATCCCTGAAGCGGACGAAGAAATCACAAAAAT
CGGAAACGTCTAATGCAATCGATAGTGGCACGTCAACGGAAAGCGCTTCG
GACGAAGATAAAAAACCGCCACAAATTAAAGGTAAAAAAACGCCCTCTGT
AATCACGGACCCAGTCTCCTTGATCACAACAGACGAAGAAAAAGGAGGCG
AGGTCAAGCCAAAGATCCGTTTAAAACCTGTACGCAAAACTTCCTCAGAG
ATAACAAATCCAATCGAAATACCGGATTCTGATGGAGAAGATTTTGTTCC
ATACTTTTTATTTCTTTTAAACCCTATAACTAGATTTATAAATTCTTTTG
TAATGTCGTGTTATTGTCATTATATTATATAAATATAAATTTCTGAGGAG
CCCCCAAGTCTTACTTGTGTAAACTACAGCCTCTGACAATCACAATTCAC
CTTTTCTCTAGAAAATAAGTAACAACCAGGAACAACGTGACACTAACGGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00002846-exon-sc0000023-1575043694:82784..83076 | TCONS_00002846-exon-sc0000023-1575043694:82784..83076 | Clytia hemisphaerica | exon |
| TCONS_00002846-exon-sc0000023-1575043694:82085..82587 | TCONS_00002846-exon-sc0000023-1575043694:82085..82587 | Clytia hemisphaerica | exon |
| TCONS_00002846-exon-sc0000023-1575043694:81027..81886 | TCONS_00002846-exon-sc0000023-1575043694:81027..81886 | Clytia hemisphaerica | exon |
| TCONS_00002846-exon-sc0000023-1510915933:82784..83076 | TCONS_00002846-exon-sc0000023-1510915933:82784..83076 | Clytia hemisphaerica | exon |
| TCONS_00002846-exon-sc0000023-1510915933:82085..82587 | TCONS_00002846-exon-sc0000023-1510915933:82085..82587 | Clytia hemisphaerica | exon |
| TCONS_00002846-exon-sc0000023-1510915933:81027..81886 | TCONS_00002846-exon-sc0000023-1510915933:81027..81886 | Clytia hemisphaerica | exon |
| TCONS_00002846-exon-sc0000023-1491911889:82784..83076 | TCONS_00002846-exon-sc0000023-1491911889:82784..83076 | Clytia hemisphaerica | exon |
| TCONS_00002846-exon-sc0000023-1491911889:82085..82587 | TCONS_00002846-exon-sc0000023-1491911889:82085..82587 | Clytia hemisphaerica | exon |
| TCONS_00002846-exon-sc0000023-1491911889:81027..81886 | TCONS_00002846-exon-sc0000023-1491911889:81027..81886 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000023 | supercontig | sc0000023:81027..83076 - |
Blast
The following BLAST results are available for this feature:
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