TCONS_00002805 (transcript) - C. hemisphaerica

Overview
NameTCONS_00002805
Unique NameTCONS_00002805
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3005

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00002805 ID=TCONS_00002805|Name=TCONS_00002805|organism=Clytia hemisphaerica|type=transcript|length=3005bp
CTTTTACATAAAAGTTTTCTACAGGCATGAAACTCTAAAGGTCTATAAGT
GAGATTTACACCAGTACTAGTAAAGTTTGGATATGAAAATGTTGATGCAA
AAGTTTATTTTGCTGACACTGCATTACTTGGTTATCACAGAATGTCAGAA
ACCTGTTAAATCAAAAGGAACAGTGCAGCCTCTGGTCTATTTGTTCAAGT
ATGGGTATGTGTCTACCAACGATTTCACAGAAAATCTACCATTGAAGTCA
AATACCATCACAAGTTTCCAAAAGTTTGCAGGCCTCCCCTTGACAGGTAT
TTTGGATGGCAGAACATTTCAACAGATGCGCCAACCAAGATGTGGTATGA
TCGATGAAGTTGaacaacaaaatgaaaacaagataaaaacaaGTCAAAGA
ACCACATCATGGCTCTCACTGTTTGACAAGAGAGAGGAGAAATTGCTAAC
ATGGTCAGTCAAGAATGGAGGTCAACAGATAACAAAAGCAAAGGTTGTTC
ACATCATCACGAAAGCATTCAAACTTTGGTCTTCTGCGTGCGATATTCGT
TTTAAACAAGTGCGAAACAATCCTGATATTGAAATCAGCTTTCAGAGTCG
AGGACATGGCGACGGAAATTATTTTGATGGGAGAGGAGGAATTCTTGCGC
ATGCGTTTTACCCACAATCAGGAAAACAAGGTAGTGAAACACTGGTTGGA
GATATTCACTTTGATAATGCTGAACAATTTGAAGCTCAAAGTAAAGAGGG
ACGAAACTATTTTGTATGGCTTGCTACTCATGAAATTGGTCATTCACTTG
GACTCCGTCATTCGCAAATCAAAGGCTCAGTTATGTTTCCATGGTACGac
aaacaaaaacacaaaatggTTAAACTTCACAAAAGCGATATCCGTGCTCT
AAGAAGATTATATAAGAACGTTGAATTGGCCCCACCTACGACCTCAAGTG
GCCTTAGTACGCCAAGTACTGATATGAAGACCCCTAGTTTGATATTTACA
ACAAACCCCGAGTCAACTTTGGAGGCTTCTATTGGTCCAATGAGAACAAC
AGGGACAACAAGAAGTGAAGGAGTTTCAACGAGTAGCGAGGATTCAACGA
GTACTGAGGTTTCAACGACCGGTGAACCTGTCACAACACACGAAACAACA
CTTTCTTTAACATCCACAGCCACTCCAAAAGTCTCAACAAAATCTGAGTC
AGGGGATCCAACAGAAACCCTGCAGACATCGACAACTAATTACCAGGAGC
CCACCGTAGAGACGTCATCAACCATGACAAGCACCAATCAACCAGCCACT
GAATTTAAGGAAGTATCTAACGCAGTGATGGAGGGGTCAAGCATTAACCC
TTTTGAATCGAGTACGCAGCCTGCANATTTAAGGAAGTATCTACCGCAGT
GATGGAGGGGTCAAGCATTAACCCTTTTGAAGCGAGTACGCAGCCTGCGA
TGATTATACCTTCCACCACAGAAATCTCATCAACGATTAACTCAATAGAG
acaacaaaatcaaacgaaAATGAGGAAAAAGCAGGAACTACGAAAGATGT
TAATACTTTAACATGTCCAAGAGCTGTCGACCAGATCGAAGCAGTTTATC
ACAGCTCGAGATATGGgattactttcgttttcaatgaGAATAACATGCTA
TCTTTTGTAAGACCGAATTCGTTGGAAGTTCTTGTAGTGAGCAGGTTTAA
CTACCTACCAAAGATCCGAGATGGCATTGATGCTGTGTTGAATATTGATG
GTGAGAATAGAGGGCCATACCAAATCATCTTCTCTGGTGAAAGCTACTAT
CTTTATCGAGATTTCGTCTCAAACGTTTTCAAGAAGGCTGGACCTTACTC
TATACATGATGAGGAAAATCCAATGAACTTTCAATTCCCAAGATGGGTCA
AGAAAATTGATGCAGCAATGACATGGACTTCTGATGGCATGACCTATTTC
TTCACCGATGCACTGTATTGGAAATATGATGCAAAACAAAAGAAGATGGC
GGACGGCTatccaaaacaaatcaaaaccaGATGGGAGGGAATTCCAGATC
AAGTCGATGCAGCATTGTCTTCGGAAGATTTGGATGTCACTTATTTCATT
TCTGGCGATATGGTCTACATTCTCAATGATAGAACTGGTTATGTAAGGGA
GACGATGACAGTTGCAGAATTCTTGAAATGCCCATGAAAAAATGACCTTA
TAACAACAAACAGCAAAGATAAAATACTTATATTATTATATCCAAAATGC
AAAATGCAAAAGAGCCAAAAGAGATGTACAAAGACCAAAACCCTCGAAAC
CCTCCtccaaactttttttcattattattgAGATCGTTCAACCCAGTGAC
ACAAACGTCAAAAACAATACCATCCAACTTCCAAACAACGTGAGACAACG
CTGGGATACTATATAAACTTGCGTCTTACGTTTTGGATCCAGATTTTTAT
GAGGAACTTTTTCTCCAAAGCAACGGGGATGTTGTAACAATCTGTCTATT
TAAACAATCTGTCTATTTAAACATGAAACAAAGAAATAACTGAAACTTAC
GTccaaattgaaaaagtttttccatccccatttATTTCCTGCGTCTATCC
GATTCTTTGACAGCAAAATCAATTCCAAAAATCCAaatcttctttttatt
tttttacatattcttaGTACAACaataaactaaaagaaaaacagaagaat
AAGAAAGATCCATTCCTCGTCGGTTCCAAAAGTTCAGATTTCCTAACGTT
CTCATTGAAATATCTTATCATGTATATGTTGCATGAatgtaatatttttt
gtcaCAATATTTCTACGCTTGCACACTTTCTTTCACTTGTTTGTATATAA
TATTTCGAAATGACAAGAGATCGAATCTTATCATGTTTCGGAAAAGAAAG
AGCCAATCAAAAACGAGATATAACACAAGTCATTTAAACAGCGCGATTtg
attggtaaaaatattgtgAAATAATTTAAGTAGTCAATTTCTTGAATAGG
AGGAA
Run BLAST on NCBI

protein sequence of TCONS_00002805-protein

>TCONS_00002805-protein ID=TCONS_00002805-protein|Name=TCONS_00002805-protein|organism=Clytia hemisphaerica|type=polypeptide|length=439bp
MKMLMQKFILLTLHYLVITECQKPVKSKGTVQPLVYLFKYGYVSTNDFTE
NLPLKSNTITSFQKFAGLPLTGILDGRTFQQMRQPRCGMIDEVEQQNENK
IKTSQRTTSWLSLFDKREEKLLTWSVKNGGQQITKAKVVHIITKAFKLWS
SACDIRFKQVRNNPDIEISFQSRGHGDGNYFDGRGGILAHAFYPQSGKQG
SETLVGDIHFDNAEQFEAQSKEGRNYFVWLATHEIGHSLGLRHSQIKGSV
MFPWYDKQKHKMVKLHKSDIRALRRLYKNVELAPPTTSSGLSTPSTDMKT
PSLIFTTNPESTLEASIGPMRTTGTTRSEGVSTSSEDSTSTEVSTTGEPV
TTHETTLSLTSTATPKVSTKSESGDPTETLQTSTTNYQEPTVETSSTMTS
TNQPATEFKEVSNAVMEGSSINPFESSTQPAXLRKYLPQ
Run BLAST on NCBI

transcript from alignment at sc0000023:403611..411485+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00002805 ID=TCONS_00002805|Name=TCONS_00002805|organism=Clytia hemisphaerica|type=transcript|length=7875bp|location=Sequence derived from alignment at sc0000023:403611..411485+ (Clytia hemisphaerica)
CTTTTACATAAAAGTTTTCTACAGGCATGAAACTCTAAAGGTCTATAAGT
GAGATTTACACCAGTACTAGTAAAGTTTGGATATGAAAATGTTGATGCAA
AAGTTTATTTTGCTGACACTGCATTACTTGGTTATCACAGAATGTCAGAA
ACCTGTTAAATCAAAAGGAACAGTGCAGCCTCTGGTGAGTTCACATTAAT
TGAAATTGactcaaaaaatgtttgaacACTATTAAGTCTATAATGACTTC
ACGACTTTATTTATAATGACTAGGGAAATGGCCTTTAAAGTCGGCTGGTT
CAAAGATAGACTTTATACGAAACTAACTTGACTGGGAACTCAAACAGAAA
CCTCAAAAAAGTCTTTACACGGTAAAGGTAAGGTAGGTAGGTAAActata
tttttatgaattatCTGCGCAAAATACCTACCACAGGACTTTCTGCtaat
ttgaacattttcaaacatttcCCAACAAAAACTCATAGCAAAACTCCTCT
CATAACTTCTACGTCGAAATTATAACGACGTACCAAGAATGTGTTACAGT
GGTGCTGGTCGACCAAGAATGTGTTACAGTGGTGCTGGTCGACCAAGAAT
GTGTTACAGTGGTGCTGGTCGACCAAGAATGTGTTACAGTGGTGCTGGTC
GACCAAGAATGTGTTACAGCGGTGCTGGTCGACCAAGAATGTGTTACAGC
GGTGCTGGTCGACCAAGAATGTGTTACAGCGGTGCTAGTCGAGTTTTCAT
TTCCTTATAAGGAGTTTGACTAAAAGAAACGCTCTCCATCAGTAATTTTG
AACCTCTCATTAAATCCGTCACTGGTATTTTCTCGACAGGTCTATTTGTT
CAAGTATGGGTATGTGTCTACCAACGATTTCACAGAAAATCTACCATTGA
AGTCAAATACCATCACAAGTTTCCAAAAGTTTGCAGGCCTCCCCTTGACA
GGTAAGAGTATagtgggccattccattttatatggATGCATACGGAGGGC
GGGTGTACGAATAATTCCAGGGGTAACCCGGGAAGAATTTTCTTGGGGTC
CAAAGGAATTTTTTTCGTCTTTCTAGGAGTTGAAAACTTGCTccagactg
attttagttcgtccaccctcagtTAAAAGGTTTTTCTTCACATTTCACGT
GAAACGTGAAAAGATTCGTCCATctccctgtatggaaatttaatggaaca
ggCCATTTGAAAAACTATCAGGCAAGCTTGTCTCAAAAGTGAGCAATTTG
TTTTCAAACATCTTCTTATCGTACTTATGCTAGATTAAAAAATTATGCAT
CGTTTGAAAGTTACTTTCAAGGAAAATTGCTTAATTTGACGATGAAGATC
ATTTTTCCTACTGGTTTAAAAATAGGGAGTTGGCCGCACTATTTAGAATA
CTTAGCCTTCTCATAGGTATTTTGGATGGCAGAACATTTCAACAGATGCG
CCAACCAAGATGTGGTATGATCGATGAAGTTGaacaacaaaatgaaaaca
agataaaaacaaGTCAAAGAACCACATCATGGCTCTCACTGTTTGACAAG
AGAGAGGAGGTCCGTCCAAATTCCATACAGTAAAATACGTCAGAAAAATA
ACCGTAACTTTAGCTTCNagcacttgcaaatcgattgtggtttcaaaaca
ccccggtgggtttcctttttgtgccaagtttTTCGTCACTGATTGTAGCT
TGCAATAATTTTACAGTGAGAGGCTAAAATTTGGGTTGTATGTTGTATGT
TGAAGAGTATTTGCGGACCGGACTTCCGATTATTGCGAAAAAGTTACTCT
TACAGAGACACAGTCCGGGAAATAGTGACCCaagattaattaaaaaaatt
tcatcaccTTAGAGAGACGTTTTTGTCTTTTCATGGTTAACACAAAGAGG
GGAAATTCCGACCCTTAGAAAGATTACTGAGACCTTTTGTTCCTACCATT
TGAGAGATTTGCGGAGGTAAAAAACCGAActttaccgtccgcacatactc
AACACCTATTTTTGTCTTAGTTACCCTCCCCTTGCCCGTTAAAGAGTGAG
GATTAGTTATGAGGATCTTCCCTTCCATAAAATCTCTTTACTATAGGTTC
TAAGTATACAAGGCTCAGAATTATAATTTCCTATTTGAGATATGTTTGGT
AGAAACGTAAGAGGTGAAAGAGAGTACAGAATTAATATTGTGTAATAAta
gtttttatctttttcacGTAATAGAAATTGCTAACATGGTCAGTCAAGAA
TGGAGGTCAACAGATAACAAAAGCAAAGGTTGTTCACATCATCACGAAAG
CATTCAAACTTTGGTCTTCTGCGTGCGATATTCGTTTTAAACAAGTGCGA
AACAATCCTGATATTGAAATCAGCTTTCAGAGTCGAGGACATGGCGACGG
AAATTATTTTGATGGGAGAGGAGGTAAATATTCGGGGATTTCAGGGATGT
TGGAAAAACGAATTTCACCAGTTGGAAACTTGCTTTAGAGACTACTTCAG
AATTGATTATTTAATCTCGATTGGAAAACTAACATAACCTCCCATCCCGA
TATTAAAAGTATGAAGACCCCCTATGGATATATATTTCAGACGTAGACAa
cagaatttgaaatttccgAAAGGGAAGTTtaatatattgaaaaatatcaa
atattgaGATCAATTTGACCGAACTGAGGGAAGAAGGTTGAAATTGTAAT
GGGAGGGGCGAGCATGATTCCTTCTAGAAAACGATTTGAACTACTCTGAG
AGACAGGCAAACATCCCCCCCCGTGACACAATCTTTCAATGGCTACTAAA
AATTACTACTTAATTTTACTTATTTATTACAAACCCCTGAAATATTATCC
CATAAAGAAACAGGTATCAAATCTTTCTTCAGGAATTCTTGCGCATGCGT
TTTACCCACAATCAGGAAAACAAGGTAGTGAAACACTGGTTGGAGATATT
CACTTTGATAATGCTGAACAATTTGAAGCTCAAAGTAAAGAGGGACGAAA
CTATTTTGTATGGCTTGCTACTCATGAAATTGGTAAGAAAAGAAATACAG
AGTTGActatctctaattcgatcttcacgAGACCAAGAGTCGTCTTCGAA
TTACGGAGAGTATTTTAATTGACTTGCTAGATTTTGCACGATATCTTTAT
CAATTTATAGGTTCGGGTGAAAGAGCTAACTAAATTAAGGAAGCGTTATT
TCTACTTGTGACCTTATTGTGATTTATGATCGAAGTAAAACCGAAACGAG
AGGGGCAAATCATGCTGAAGCGCTACTGCCATGGCTAACGTTTAAAATCG
AATCCGCAATTTCGATGACAGATTCAACAATGCTTTCTTAAATGTTACTT
TTACTCCAGCATTGAGTGAAAAAAACGCAGATCGGGCATTCAGCGATAAT
GGCTAAGTCCTGaccctaaataaaaaatttgctttCTCTTCATAGGTCAT
TCACTTGGACTCCGTCATTCGCAAATCAAAGGCTCAGTTATGTTTCCATG
GTACGacaaacaaaaacacaaaatggTTAAACTTCACAAAAGCGATATCC
GTGCTCTAAGAAGATTATATAAGAACGTTGAATTGGCCCCACCTACGACC
TCAAGTGGCCTTAGTACGCCAAGTACTGATATGAAGACCCCTAGTTTGAT
ATTTACAACAAACCCCGAGTCAACTTTGGAGGCTTCTATTGGTCCAATGA
GAACAACAGGGACAACAAGAAGTGAAGGAGTTTCAACGAGTAGCGAGGAT
TCAACGAGTACTGAGGTTTCAACGACCGGTGAACCTGTCACAACACACGA
AACAACACTTTCTTTAACATCCACAGCCACTCCAAAAGGTAGGAGACGAC
TTTCCGATGGAAAGTAAAGAGTGGAAAACTGATTTTGTagcatagtgcgg
aaaggggtctgatccccccttcttaaatgatccccccttcttgacatccc
cccaacctttaaaaatgcctatccccaagGGTTTCGGGCTAaatttttat
ggtaaaaagggaagggaaacagtaacGAAAAATTTAGTCTGGCAAATATT
ATCcaactttttagtgaaaataaagaacttcctttcatgcagaccaaatt
tcataacagtgctggaaaataatctacaatatatgtaagccccccctCCT
TGCTACCCcccctttttagtgaaaataaagaacttcctttcatgcagacc
aaatttcataacagtgctggaaaataatctacaatatatgtaagcccccc
ctCCTTGCTACCCcccctttttagtgaaaatttctgatcccccccttctt
cacttttttggaaggtgtcatccccccccccttaagaaaggagGGGGGTC
CGAACTATGTGTAGTCTTTACGATTCTAGCAGCTTAACTCTTCTGACTTC
TGAGAAACAAGCCTTAAAaatagaaatctttttttcccTCAATAGTCTCA
ACAAAATCTGAGTCAGGGGATCCAACAGAAACCCTGCAGACATCGACAAC
TAATTACCAGGAGCCCACCGTAGAGACGTCATCAACCATGACAAGCACCA
ATCAACCAGCCACTGAATTTAAGGAAGTATCTAACGCAGTGATGGAGGGG
TCAAGCATTAACCCTTTTGAATCGAGTACGCAGCCTGCANATTTAAGGAA
GTATCTACCGCAGTGATGGAGGGGTCAAGCATTAACCCTTTTGAAGCGAG
TACGCAGCCTGCGATGATTATACCTTCCACCACAGAAATCTCATCAACGA
TTAACTCAATAGAGacaacaaaatcaaacgaaAATGAGGAAAAAGCAGGA
ACTACGAAAGATGTTAATACTTTAACATGTCCAAGAGCTGTCGACCAGAT
CGAAGCAGTTTATCACAGCTCGAGATATGGgattactttcgttttcaatg
aGAATAACATGCTATCTTTTGTAAGACCGAATTCGTTGGAAGTTCTTGTA
GTGAGCAGGTTTAACTACCTACCAAAGATCCGAGATGGCATTGATGCTGT
GTTGAATATTGATGGTGAGAATAGAGGGCCATACCAAATCATCTTCTCTG
GTGAAAGGTAAGATATCAATGCCATGGAATCTCATATTTAGTGTCTGAGT
GTCTGAGTCCAATTGTAGTTCTAGGAAAAACTCataagacaaaaatttgc
gtgTGTATTTATTATGGATAAGAACAATAAGACCTTAGTAAGAATATTCA
CTGTAATTTAAATATTAGAGCGGGTACCTCAATCGGTCGAGCATTCGCCA
AgtgttgtgggttcgatccctggTCACCACCAACTCAGCCGAAAGAGTAG
CTTAGATTATTTGCTGTGATATGGGCGGTAAGTAATGGGGATCTGAGTGG
CACTCCACTTCAGCATTCAATCTCCCAGGCCTAATGCAAATAGAAAAGAG
GATAAActgccaccagatgaatatacttactttacTTACTTAACGAGTAT
TATTTTTCAGCTACTATCTTTATCGAGATTTCGTCTCAAACGTTTTCAAG
AAGGCTGGACCTTACTCTATACATGATGAGGAAAATCCAATGAACTTTCA
ATTCCCAAGATGGGTCAAGAAAATTGATGCAGCAATGACATGGACTTCTG
ATGGCATGACCTATTTCTTCACCGGTGAGTTTATTTCTTTCGTCAATTAT
TAAAAATTGCTGAATTTGGCTATGATATAGCAAAGAATACTATATGCTCC
TGAAATATCAGTTGCAAGTTCAAACCCTCTGGAATTcttttacaaaatta
aaaaaattcaacccTATTGAGTTTCAGTTTTGAAGGGTTTTGGTCATCCT
CCAAATTTATTAAATTCCATGTGTTTTAGCCCTCCCTTGAGCGATATTTG
TAATGGTATTCATAATGGAAAACATCCTCCCTATTCAAATCTCCAAGTCT
ACATGCCTGATTGACCTGCTTCTATTGGCAATATTGAATGTGCATGAGTC
GTGACATGCAATGGTCCATTCCTCTGAAATGTCCTTATATCAGTCGGTTA
AAGCCTTGACTGTACACTCATTCCATTATGTTCCGGAATCTTCACTAACT
GAAAGAATGAGGACTACAAAAATAAAAGTTGAATTTCTCTATTAGATGCA
CTGTATTGGAAATATGATGCAAAACAAAAGAAGATGGCGGACGGCTatcc
aaaacaaatcaaaaccaGATGGGAGGGAATTCCAGATCAAGTCGATGCAG
CATTGTCTTCGGAAGATTTGGATGTCACTTATTTCATTTCTGGCGATATG
GTCTACATTCTCAATGATAGGTAAAACTTGTTACCATCAGTTCCAAATCT
TATGTACCCCCAAGAATGcaactaccttattggaactaattttcgcggga
actaattttcgcggtcgaaaaaaaataaccgaaaaattgcatttcgcggg
tcttaattttcgcggttttttccattctggaattttcgcgggttttaatt
tttgcggttttgcccttttttggacaaatttctttcattttcctagggat
ttttcaaatttttcgataaaattggaaacaaattgtatttcgcgggaatt
aattttcgcggttctTAACTCTCAgaatttttcgcgggatcaaattttcg
cgatttcgacgaaaaaccgcgaaaaacgctaaaattaaaacccgcgaaaa
ttagttccaataaggtaaacAAATCCCGTGGTATTCTATTAATCTAAAGT
ATACTCTTCGATAATGAAGTGTCTGTTGAGTACTATctactttaaaactt
taaaatatatAGCCGATGAAGGAATCGAATCTCCTATGTAGGATTCGAAG
CCAATTATTTCCTACATATGTGGTGCGACCCGCACGGTTTTCATACAAAT
GATGGACTGGAAATAACATTTACCGGTAGaataataaaaaagtaaaacgc
gaaaacaaagaaagtgatAAATTCAAACCGGTCCACTTTAGttttcggct
tgaaactcaatgttcaTACCCTATAGCAAAGGaaagttttcttttacttt
AGAACTGGTTATGTAAGGGAGACGATGACAGTTGCAGAATTCTTGAAATG
CCCATGAAAAAATGACCTTATAACAACAAACAGCAAAGATAAAATACTTA
TATTATTATATCCAAAATGCAAAATGCAAAAGAGCCAAAAGAGATGTACA
AAGACCAAAACCCTCGAAACCCTCCtccaaactttttttcattattattg
AGATCGTTCAACCCAGTGACACAAACGTCAAAAACAATACCATCCAACTT
CCAAACAACGTGAGACAACGCTGGGATACTATATAAACTTGCGTCTTACG
TTTTGGATCCAGATTTTTATGAGGAACTTTTTCTCCAAAGCAACGGGGAT
GTTGTAACAATCTGTCTATTTAAACAATCTGTCTATTTAAACATGAAACA
AAGAAATAACTGAAACTTACGTccaaattgaaaaagtttttccatcccca
tttATTTCCTGCGTCTATCCGATTCTTTGACAGCAAAATCAATTCCAAAA
ATCCAaatcttctttttatttttttacatattcttaGTACAACaataaac
taaaagaaaaacagaagaatAAGAAAGATCCATTCCTCGTCGGTTCCAAA
AGTTCAGATTTCCTAACGTTCTCATTGAAATATCTTATCATGTATATGTT
GCATGAatgtaatattttttgtcaCAATATTTCTACGCTTGCACACTTTC
TTTCACTTGTTTGTATATAATATTTCGAAATGACAAGAGATCGAATCTTA
TCATGTTTCGGAAAAGAAAGAGCCAATCAAAAACGAGATATAACACAAGT
CATTTAAACAGCGCGATTtgattggtaaaaatattgtgAAATAATTTAAG
TAGTCAATTTCTTGAATAGGAGGAA

Coding sequence (CDS) from alignment at sc0000023:403611..411485+

>TCONS_00002805 ID=TCONS_00002805|Name=TCONS_00002805|organism=Clytia hemisphaerica|type=CDS|length=9240bp|location=Sequence derived from alignment at sc0000023:403611..411485+ (Clytia hemisphaerica)
ATGAAAATGTTGATGCAAAAGTTTATTTTGCTGACACTGCATTACTTGGT
TATCACAGAATGTCAGAAACCTGTTAAATCAAAAGGAACAGTGCAGCCTC
TGGTCTATTTGTTCAAGTATGGGTATGTGTCTACCAACGATTTCACAGAA
AATCTACCATTGAAGTCAAATACCATCACAAGTTTCCAAAAGTTTGCAGG
CCTCCCCTTGACAGGTATTTTGGATGGCAGAACATTTCAACAGATGCGCC
AACCAAGATGTGGTATGATCGATGAAGTTGaacaacaaaatgaaaacaag
ataaaaacaaGTCAAAGAACCACATCATGGCTCTCACTGTTTGACAAGAG
AGAGGAGAAATTGCTAACATGGTCAGTCAAGAATGGAGGTCAACAGATAA
CAAAAGCAAAGGTTGTTCACATCATCACGAAAGCATTCAAACTTTGGTCT
TCTGCGTGCGATATTCGTTTTAAACAAGTGCGAAACAATCCTGATATTGA
AATCAGCTTTCAGAGTCGAGGACATGGCGACGGAAATTATTTTGATGGGA
GAGGAGGAATTCTTGCGCATGCGTTTTACCCACAATCAGGAAAACAAGGT
AGTGAAACACTGGTTGGAGATATTCACTTTGATAATGCTGAACAATTTGA
AGCTCAAAGTAAAGAGGGACGAAACTATTTTGTATGGCTTGCTACTCATG
AAATTGGTCATTCACTTGGACTCCGTCATTCGCAAATCAAAGGCTCAGTT
ATGTTTCCATGGTACGacaaacaaaaacacaaaatggTTAAACTTCACAA
AAGCGATATCCGTGCTCTAAGAAGATTATATAAGAACGTTGAATTGGCCC
CACCTACGACCTCAAGTGGCCTTAGTACGCCAAGTACTGATATGAAGACC
CCTAGTTTGATATTTACAACAAACCCCGAGTCAACTTTGGAGGCTTCTAT
TGGTCCAATGAGAACAACAGGGACAACAAGAAGTGAAGGAGTTTCAACGA
GTAGCGAGGATTCAACGAGTACTGAGGTTTCAACGACCGGTGAACCTGTC
ACAACACACGAAACAACACTTTCTTTAACATCCACAGCCACTCCAAAAGT
CTCAACAAAATCTGAGTCAGGGGATCCAACAGAAACCCTGCAGACATCGA
CAACTAATTACCAGGAGCCCACCGTAGAGACGTCATCAACCATGACAAGC
ACCAATCAACCAGCCACTGAATTTAAGGAAGTATCTAACGCAGTGATGGA
GGGGTCAAGCATTAACCCTTTTGAATCGAGTACGCAGCCTGCANATTTAA
GGAAGTATCTACCGCAGTGAATGAAAATGTTGATGCAAAAGTTTATTTTG
CTGACACTGCATTACTTGGTTATCACAGAATGTCAGAAACCTGTTAAATC
AAAAGGAACAGTGCAGCCTCTGGTCTATTTGTTCAAGTATGGGTATGTGT
CTACCAACGATTTCACAGAAAATCTACCATTGAAGTCAAATACCATCACA
AGTTTCCAAAAGTTTGCAGGCCTCCCCTTGACAGGTATTTTGGATGGCAG
AACATTTCAACAGATGCGCCAACCAAGATGTGGTATGATCGATGAAGTTG
aacaacaaaatgaaaacaagataaaaacaaGTCAAAGAACCACATCATGG
CTCTCACTGTTTGACAAGAGAGAGGAGAAATTGCTAACATGGTCAGTCAA
GAATGGAGGTCAACAGATAACAAAAGCAAAGGTTGTTCACATCATCACGA
AAGCATTCAAACTTTGGTCTTCTGCGTGCGATATTCGTTTTAAACAAGTG
CGAAACAATCCTGATATTGAAATCAGCTTTCAGAGTCGAGGACATGGCGA
CGGAAATTATTTTGATGGGAGAGGAGGAATTCTTGCGCATGCGTTTTACC
CACAATCAGGAAAACAAGGTAGTGAAACACTGGTTGGAGATATTCACTTT
GATAATGCTGAACAATTTGAAGCTCAAAGTAAAGAGGGACGAAACTATTT
TGTATGGCTTGCTACTCATGAAATTGGTCATTCACTTGGACTCCGTCATT
CGCAAATCAAAGGCTCAGTTATGTTTCCATGGTACGacaaacaaaaacac
aaaatggTTAAACTTCACAAAAGCGATATCCGTGCTCTAAGAAGATTATA
TAAGAACGTTGAATTGGCCCCACCTACGACCTCAAGTGGCCTTAGTACGC
CAAGTACTGATATGAAGACCCCTAGTTTGATATTTACAACAAACCCCGAG
TCAACTTTGGAGGCTTCTATTGGTCCAATGAGAACAACAGGGACAACAAG
AAGTGAAGGAGTTTCAACGAGTAGCGAGGATTCAACGAGTACTGAGGTTT
CAACGACCGGTGAACCTGTCACAACACACGAAACAACACTTTCTTTAACA
TCCACAGCCACTCCAAAAGTCTCAACAAAATCTGAGTCAGGGGATCCAAC
AGAAACCCTGCAGACATCGACAACTAATTACCAGGAGCCCACCGTAGAGA
CGTCATCAACCATGACAAGCACCAATCAACCAGCCACTGAATTTAAGGAA
GTATCTAACGCAGTGATGGAGGGGTCAAGCATTAACCCTTTTGAATCGAG
TACGCAGCCTGCANATTTAAGGAAGTATCTACCGCAGTGAATGAAAATGT
TGATGCAAAAGTTTATTTTGCTGACACTGCATTACTTGGTTATCACAGAA
TGTCAGAAACCTGTTAAATCAAAAGGAACAGTGCAGCCTCTGGTCTATTT
GTTCAAGTATGGGTATGTGTCTACCAACGATTTCACAGAAAATCTACCAT
TGAAGTCAAATACCATCACAAGTTTCCAAAAGTTTGCAGGCCTCCCCTTG
ACAGGTATTTTGGATGGCAGAACATTTCAACAGATGCGCCAACCAAGATG
TGGTATGATCGATGAAGTTGaacaacaaaatgaaaacaagataaaaacaa
GTCAAAGAACCACATCATGGCTCTCACTGTTTGACAAGAGAGAGGAGAAA
TTGCTAACATGGTCAGTCAAGAATGGAGGTCAACAGATAACAAAAGCAAA
GGTTGTTCACATCATCACGAAAGCATTCAAACTTTGGTCTTCTGCGTGCG
ATATTCGTTTTAAACAAGTGCGAAACAATCCTGATATTGAAATCAGCTTT
CAGAGTCGAGGACATGGCGACGGAAATTATTTTGATGGGAGAGGAGGAAT
TCTTGCGCATGCGTTTTACCCACAATCAGGAAAACAAGGTAGTGAAACAC
TGGTTGGAGATATTCACTTTGATAATGCTGAACAATTTGAAGCTCAAAGT
AAAGAGGGACGAAACTATTTTGTATGGCTTGCTACTCATGAAATTGGTCA
TTCACTTGGACTCCGTCATTCGCAAATCAAAGGCTCAGTTATGTTTCCAT
GGTACGacaaacaaaaacacaaaatggTTAAACTTCACAAAAGCGATATC
CGTGCTCTAAGAAGATTATATAAGAACGTTGAATTGGCCCCACCTACGAC
CTCAAGTGGCCTTAGTACGCCAAGTACTGATATGAAGACCCCTAGTTTGA
TATTTACAACAAACCCCGAGTCAACTTTGGAGGCTTCTATTGGTCCAATG
AGAACAACAGGGACAACAAGAAGTGAAGGAGTTTCAACGAGTAGCGAGGA
TTCAACGAGTACTGAGGTTTCAACGACCGGTGAACCTGTCACAACACACG
AAACAACACTTTCTTTAACATCCACAGCCACTCCAAAAGTCTCAACAAAA
TCTGAGTCAGGGGATCCAACAGAAACCCTGCAGACATCGACAACTAATTA
CCAGGAGCCCACCGTAGAGACGTCATCAACCATGACAAGCACCAATCAAC
CAGCCACTGAATTTAAGGAAGTATCTAACGCAGTGATGGAGGGGTCAAGC
ATTAACCCTTTTGAATCGAGTACGCAGCCTGCANATTTAAGGAAGTATCT
ACCGCAGTGAATGAAAATGTTGATGCAAAAGTTTATTTTGCTGACACTGC
ATTACTTGGTTATCACAGAATGTCAGAAACCTGTTAAATCAAAAGGAACA
GTGCAGCCTCTGGTCTATTTGTTCAAGTATGGGTATGTGTCTACCAACGA
TTTCACAGAAAATCTACCATTGAAGTCAAATACCATCACAAGTTTCCAAA
AGTTTGCAGGCCTCCCCTTGACAGGTATTTTGGATGGCAGAACATTTCAA
CAGATGCGCCAACCAAGATGTGGTATGATCGATGAAGTTGaacaacaaaa
tgaaaacaagataaaaacaaGTCAAAGAACCACATCATGGCTCTCACTGT
TTGACAAGAGAGAGGAGAAATTGCTAACATGGTCAGTCAAGAATGGAGGT
CAACAGATAACAAAAGCAAAGGTTGTTCACATCATCACGAAAGCATTCAA
ACTTTGGTCTTCTGCGTGCGATATTCGTTTTAAACAAGTGCGAAACAATC
CTGATATTGAAATCAGCTTTCAGAGTCGAGGACATGGCGACGGAAATTAT
TTTGATGGGAGAGGAGGAATTCTTGCGCATGCGTTTTACCCACAATCAGG
AAAACAAGGTAGTGAAACACTGGTTGGAGATATTCACTTTGATAATGCTG
AACAATTTGAAGCTCAAAGTAAAGAGGGACGAAACTATTTTGTATGGCTT
GCTACTCATGAAATTGGTCATTCACTTGGACTCCGTCATTCGCAAATCAA
AGGCTCAGTTATGTTTCCATGGTACGacaaacaaaaacacaaaatggTTA
AACTTCACAAAAGCGATATCCGTGCTCTAAGAAGATTATATAAGAACGTT
GAATTGGCCCCACCTACGACCTCAAGTGGCCTTAGTACGCCAAGTACTGA
TATGAAGACCCCTAGTTTGATATTTACAACAAACCCCGAGTCAACTTTGG
AGGCTTCTATTGGTCCAATGAGAACAACAGGGACAACAAGAAGTGAAGGA
GTTTCAACGAGTAGCGAGGATTCAACGAGTACTGAGGTTTCAACGACCGG
TGAACCTGTCACAACACACGAAACAACACTTTCTTTAACATCCACAGCCA
CTCCAAAAGTCTCAACAAAATCTGAGTCAGGGGATCCAACAGAAACCCTG
CAGACATCGACAACTAATTACCAGGAGCCCACCGTAGAGACGTCATCAAC
CATGACAAGCACCAATCAACCAGCCACTGAATTTAAGGAAGTATCTAACG
CAGTGATGGAGGGGTCAAGCATTAACCCTTTTGAATCGAGTACGCAGCCT
GCANATTTAAGGAAGTATCTACCGCAGTGAATGAAAATGTTGATGCAAAA
GTTTATTTTGCTGACACTGCATTACTTGGTTATCACAGAATGTCAGAAAC
CTGTTAAATCAAAAGGAACAGTGCAGCCTCTGGTCTATTTGTTCAAGTAT
GGGTATGTGTCTACCAACGATTTCACAGAAAATCTACCATTGAAGTCAAA
TACCATCACAAGTTTCCAAAAGTTTGCAGGCCTCCCCTTGACAGGTATTT
TGGATGGCAGAACATTTCAACAGATGCGCCAACCAAGATGTGGTATGATC
GATGAAGTTGaacaacaaaatgaaaacaagataaaaacaaGTCAAAGAAC
CACATCATGGCTCTCACTGTTTGACAAGAGAGAGGAGAAATTGCTAACAT
GGTCAGTCAAGAATGGAGGTCAACAGATAACAAAAGCAAAGGTTGTTCAC
ATCATCACGAAAGCATTCAAACTTTGGTCTTCTGCGTGCGATATTCGTTT
TAAACAAGTGCGAAACAATCCTGATATTGAAATCAGCTTTCAGAGTCGAG
GACATGGCGACGGAAATTATTTTGATGGGAGAGGAGGAATTCTTGCGCAT
GCGTTTTACCCACAATCAGGAAAACAAGGTAGTGAAACACTGGTTGGAGA
TATTCACTTTGATAATGCTGAACAATTTGAAGCTCAAAGTAAAGAGGGAC
GAAACTATTTTGTATGGCTTGCTACTCATGAAATTGGTCATTCACTTGGA
CTCCGTCATTCGCAAATCAAAGGCTCAGTTATGTTTCCATGGTACGacaa
acaaaaacacaaaatggTTAAACTTCACAAAAGCGATATCCGTGCTCTAA
GAAGATTATATAAGAACGTTGAATTGGCCCCACCTACGACCTCAAGTGGC
CTTAGTACGCCAAGTACTGATATGAAGACCCCTAGTTTGATATTTACAAC
AAACCCCGAGTCAACTTTGGAGGCTTCTATTGGTCCAATGAGAACAACAG
GGACAACAAGAAGTGAAGGAGTTTCAACGAGTAGCGAGGATTCAACGAGT
ACTGAGGTTTCAACGACCGGTGAACCTGTCACAACACACGAAACAACACT
TTCTTTAACATCCACAGCCACTCCAAAAGTCTCAACAAAATCTGAGTCAG
GGGATCCAACAGAAACCCTGCAGACATCGACAACTAATTACCAGGAGCCC
ACCGTAGAGACGTCATCAACCATGACAAGCACCAATCAACCAGCCACTGA
ATTTAAGGAAGTATCTAACGCAGTGATGGAGGGGTCAAGCATTAACCCTT
TTGAATCGAGTACGCAGCCTGCANATTTAAGGAAGTATCTACCGCAGTGA
ATGAAAATGTTGATGCAAAAGTTTATTTTGCTGACACTGCATTACTTGGT
TATCACAGAATGTCAGAAACCTGTTAAATCAAAAGGAACAGTGCAGCCTC
TGGTCTATTTGTTCAAGTATGGGTATGTGTCTACCAACGATTTCACAGAA
AATCTACCATTGAAGTCAAATACCATCACAAGTTTCCAAAAGTTTGCAGG
CCTCCCCTTGACAGGTATTTTGGATGGCAGAACATTTCAACAGATGCGCC
AACCAAGATGTGGTATGATCGATGAAGTTGaacaacaaaatgaaaacaag
ataaaaacaaGTCAAAGAACCACATCATGGCTCTCACTGTTTGACAAGAG
AGAGGAGAAATTGCTAACATGGTCAGTCAAGAATGGAGGTCAACAGATAA
CAAAAGCAAAGGTTGTTCACATCATCACGAAAGCATTCAAACTTTGGTCT
TCTGCGTGCGATATTCGTTTTAAACAAGTGCGAAACAATCCTGATATTGA
AATCAGCTTTCAGAGTCGAGGACATGGCGACGGAAATTATTTTGATGGGA
GAGGAGGAATTCTTGCGCATGCGTTTTACCCACAATCAGGAAAACAAGGT
AGTGAAACACTGGTTGGAGATATTCACTTTGATAATGCTGAACAATTTGA
AGCTCAAAGTAAAGAGGGACGAAACTATTTTGTATGGCTTGCTACTCATG
AAATTGGTCATTCACTTGGACTCCGTCATTCGCAAATCAAAGGCTCAGTT
ATGTTTCCATGGTACGacaaacaaaaacacaaaatggTTAAACTTCACAA
AAGCGATATCCGTGCTCTAAGAAGATTATATAAGAACGTTGAATTGGCCC
CACCTACGACCTCAAGTGGCCTTAGTACGCCAAGTACTGATATGAAGACC
CCTAGTTTGATATTTACAACAAACCCCGAGTCAACTTTGGAGGCTTCTAT
TGGTCCAATGAGAACAACAGGGACAACAAGAAGTGAAGGAGTTTCAACGA
GTAGCGAGGATTCAACGAGTACTGAGGTTTCAACGACCGGTGAACCTGTC
ACAACACACGAAACAACACTTTCTTTAACATCCACAGCCACTCCAAAAGT
CTCAACAAAATCTGAGTCAGGGGATCCAACAGAAACCCTGCAGACATCGA
CAACTAATTACCAGGAGCCCACCGTAGAGACGTCATCAACCATGACAAGC
ACCAATCAACCAGCCACTGAATTTAAGGAAGTATCTAACGCAGTGATGGA
GGGGTCAAGCATTAACCCTTTTGAATCGAGTACGCAGCCTGCANATTTAA
GGAAGTATCTACCGCAGTGAATGAAAATGTTGATGCAAAAGTTTATTTTG
CTGACACTGCATTACTTGGTTATCACAGAATGTCAGAAACCTGTTAAATC
AAAAGGAACAGTGCAGCCTCTGGTCTATTTGTTCAAGTATGGGTATGTGT
CTACCAACGATTTCACAGAAAATCTACCATTGAAGTCAAATACCATCACA
AGTTTCCAAAAGTTTGCAGGCCTCCCCTTGACAGGTATTTTGGATGGCAG
AACATTTCAACAGATGCGCCAACCAAGATGTGGTATGATCGATGAAGTTG
aacaacaaaatgaaaacaagataaaaacaaGTCAAAGAACCACATCATGG
CTCTCACTGTTTGACAAGAGAGAGGAGAAATTGCTAACATGGTCAGTCAA
GAATGGAGGTCAACAGATAACAAAAGCAAAGGTTGTTCACATCATCACGA
AAGCATTCAAACTTTGGTCTTCTGCGTGCGATATTCGTTTTAAACAAGTG
CGAAACAATCCTGATATTGAAATCAGCTTTCAGAGTCGAGGACATGGCGA
CGGAAATTATTTTGATGGGAGAGGAGGAATTCTTGCGCATGCGTTTTACC
CACAATCAGGAAAACAAGGTAGTGAAACACTGGTTGGAGATATTCACTTT
GATAATGCTGAACAATTTGAAGCTCAAAGTAAAGAGGGACGAAACTATTT
TGTATGGCTTGCTACTCATGAAATTGGTCATTCACTTGGACTCCGTCATT
CGCAAATCAAAGGCTCAGTTATGTTTCCATGGTACGacaaacaaaaacac
aaaatggTTAAACTTCACAAAAGCGATATCCGTGCTCTAAGAAGATTATA
TAAGAACGTTGAATTGGCCCCACCTACGACCTCAAGTGGCCTTAGTACGC
CAAGTACTGATATGAAGACCCCTAGTTTGATATTTACAACAAACCCCGAG
TCAACTTTGGAGGCTTCTATTGGTCCAATGAGAACAACAGGGACAACAAG
AAGTGAAGGAGTTTCAACGAGTAGCGAGGATTCAACGAGTACTGAGGTTT
CAACGACCGGTGAACCTGTCACAACACACGAAACAACACTTTCTTTAACA
TCCACAGCCACTCCAAAAGTCTCAACAAAATCTGAGTCAGGGGATCCAAC
AGAAACCCTGCAGACATCGACAACTAATTACCAGGAGCCCACCGTAGAGA
CGTCATCAACCATGACAAGCACCAATCAACCAGCCACTGAATTTAAGGAA
GTATCTAACGCAGTGATGGAGGGGTCAAGCATTAACCCTTTTGAATCGAG
TACGCAGCCTGCANATTTAAGGAAGTATCTACCGCAGTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001530XLOC_001530Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00002805-proteinTCONS_00002805-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00002805-exon-sc0000023-1491911889:403611..403794TCONS_00002805-exon-sc0000023-1491911889:403611..403794Clytia hemisphaericaexon
TCONS_00002805-exon-sc0000023-1510915933:403611..403794TCONS_00002805-exon-sc0000023-1510915933:403611..403794Clytia hemisphaericaexon
TCONS_00002805-exon-sc0000023-1575043694:403611..403794TCONS_00002805-exon-sc0000023-1575043694:403611..403794Clytia hemisphaericaexon
TCONS_00002805-exon-sc0000023-1491911889:404450..404561TCONS_00002805-exon-sc0000023-1491911889:404450..404561Clytia hemisphaericaexon
TCONS_00002805-exon-sc0000023-1510915933:404450..404561TCONS_00002805-exon-sc0000023-1510915933:404450..404561Clytia hemisphaericaexon
TCONS_00002805-exon-sc0000023-1575043694:404450..404561TCONS_00002805-exon-sc0000023-1575043694:404450..404561Clytia hemisphaericaexon
TCONS_00002805-exon-sc0000023-1491911889:405027..405169TCONS_00002805-exon-sc0000023-1491911889:405027..405169Clytia hemisphaericaexon
TCONS_00002805-exon-sc0000023-1510915933:405027..405169TCONS_00002805-exon-sc0000023-1510915933:405027..405169Clytia hemisphaericaexon
TCONS_00002805-exon-sc0000023-1575043694:405027..405169TCONS_00002805-exon-sc0000023-1575043694:405027..405169Clytia hemisphaericaexon
TCONS_00002805-exon-sc0000023-1491911889:405835..406033TCONS_00002805-exon-sc0000023-1491911889:405835..406033Clytia hemisphaericaexon
TCONS_00002805-exon-sc0000023-1510915933:405835..406033TCONS_00002805-exon-sc0000023-1510915933:405835..406033Clytia hemisphaericaexon
TCONS_00002805-exon-sc0000023-1575043694:405835..406033TCONS_00002805-exon-sc0000023-1575043694:405835..406033Clytia hemisphaericaexon
TCONS_00002805-exon-sc0000023-1491911889:406493..406642TCONS_00002805-exon-sc0000023-1491911889:406493..406642Clytia hemisphaericaexon
TCONS_00002805-exon-sc0000023-1510915933:406493..406642TCONS_00002805-exon-sc0000023-1510915933:406493..406642Clytia hemisphaericaexon
TCONS_00002805-exon-sc0000023-1575043694:406493..406642TCONS_00002805-exon-sc0000023-1575043694:406493..406642Clytia hemisphaericaexon
TCONS_00002805-exon-sc0000023-1491911889:407056..407448TCONS_00002805-exon-sc0000023-1491911889:407056..407448Clytia hemisphaericaexon
TCONS_00002805-exon-sc0000023-1510915933:407056..407448TCONS_00002805-exon-sc0000023-1510915933:407056..407448Clytia hemisphaericaexon
TCONS_00002805-exon-sc0000023-1575043694:407056..407448TCONS_00002805-exon-sc0000023-1575043694:407056..407448Clytia hemisphaericaexon
TCONS_00002805-exon-sc0000023-1491911889:408056..408667TCONS_00002805-exon-sc0000023-1491911889:408056..408667Clytia hemisphaericaexon
TCONS_00002805-exon-sc0000023-1510915933:408056..408667TCONS_00002805-exon-sc0000023-1510915933:408056..408667Clytia hemisphaericaexon
TCONS_00002805-exon-sc0000023-1575043694:408056..408667TCONS_00002805-exon-sc0000023-1575043694:408056..408667Clytia hemisphaericaexon
TCONS_00002805-exon-sc0000023-1491911889:409071..409234TCONS_00002805-exon-sc0000023-1491911889:409071..409234Clytia hemisphaericaexon
TCONS_00002805-exon-sc0000023-1510915933:409071..409234TCONS_00002805-exon-sc0000023-1510915933:409071..409234Clytia hemisphaericaexon
TCONS_00002805-exon-sc0000023-1575043694:409071..409234TCONS_00002805-exon-sc0000023-1575043694:409071..409234Clytia hemisphaericaexon
TCONS_00002805-exon-sc0000023-1491911889:409706..409880TCONS_00002805-exon-sc0000023-1491911889:409706..409880Clytia hemisphaericaexon
TCONS_00002805-exon-sc0000023-1510915933:409706..409880TCONS_00002805-exon-sc0000023-1510915933:409706..409880Clytia hemisphaericaexon
TCONS_00002805-exon-sc0000023-1575043694:409706..409880TCONS_00002805-exon-sc0000023-1575043694:409706..409880Clytia hemisphaericaexon
TCONS_00002805-exon-sc0000023-1491911889:410613..411485TCONS_00002805-exon-sc0000023-1491911889:410613..411485Clytia hemisphaericaexon
TCONS_00002805-exon-sc0000023-1510915933:410613..411485TCONS_00002805-exon-sc0000023-1510915933:410613..411485Clytia hemisphaericaexon
TCONS_00002805-exon-sc0000023-1575043694:410613..411485TCONS_00002805-exon-sc0000023-1575043694:410613..411485Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000023supercontigsc0000023:403611..411485 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0.0562229	0.034223	0.0270435	0.0326268	0.0152724	0.117333	0.132445	0.0423199	0.064912	0.0675111	0.0384675	0.165717	0.033939	5.05902	2.08913	0.296745	0.0619538	20.7992	21.3934	3.94328	5.48638	7.28032	9.03248	0.267291	0.163006	0.247269	0.299164
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR021190Pept_M10A
IPR006026Peptidase_Metallo
IPR001818Pept_M10_metallopeptidase
IPR024079MetalloPept_cat_dom
IPR033739M10A_MMP
IPR002477Peptidoglycan-bd-like
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0004222metalloendopeptidase activity
GO:0008237metallopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
Vocabulary: Cellular Component
TermDefinition
GO:0031012extracellular matrix
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
cellular_component GO:0031012 extracellular matrix
molecular_function GO:0004222 metalloendopeptidase activity
molecular_function GO:0008237 metallopeptidase activity
molecular_function GO:0008270 zinc ion binding
Blast
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BLAST of TCONS_00002805 vs. Swiss-Prot (Human)
Match: MMP7 (Matrilysin OS=Homo sapiens GN=MMP7 PE=1 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.037e-33
Identity = 78/220 (35.45%), Postives = 117/220 (53.18%), Query Frame = 2 
Query:  257 ITSFQKFAGLPLTGILDGRTFQQMRQPRCGMIDEVEQQNENKIKTSQRTTSWLSLFDKREEKLLTWSVKNGGQQITKAKVVHIITKAFKLWSSACDIRFKQVR-NNPDIEISFQSRGHGDGNYFDGRGGILAHAFYPQSGKQGSETLVGDIHFDNAEQFEAQSKEGRNYFVWLATHEIGHSLGLRHSQIKGSVMFPWYDKQKHKMVKLHKSDIRALRRLY 913
            +   QKF GLP+TG+L+ R  + M++PRCG+ D  E    +    S + TS          K++T+ + +  + +    V  +++KA  +W     + F++V     DI I F    HGD   FDG G  LAHAF P +G      L GD HFD  E++   S  G N F++ ATHE+GHSLG+ HS    +VM+P Y     +  KL + DI+ +++LY
Sbjct:   59 LKEMQKFFGLPITGMLNSRVIEIMQKPRCGVPDVAEY---SLFPNSPKWTS----------KVVTYRIVSYTRDLPHITVDRLVSKALNMWGKEIPLHFRKVVWGTADIMIGFARGAHGDSYPFDGPGNTLAHAFAPGTG------LGGDAHFDEDERWTDGSSLGIN-FLYAATHELGHSLGMGHSSDPNAVMYPTYGNGDPQNFKLSQDDIKGIQKLY 258
The following BLAST results are available for this feature:
BLAST of TCONS_00002805 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MMP71.037e-3335.45Matrilysin OS=Homo sapiens GN=MMP7 PE=1 SV=1[more]
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