XLOC_001530 (gene) - C. hemisphaerica

Overview
NameXLOC_001530
Unique NameXLOC_001530
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000023:403611..411485+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001530 ID=XLOC_001530|Name=XLOC_001530|organism=Clytia hemisphaerica|type=gene|length=7875bp|location=Sequence derived from alignment at sc0000023:403611..411485+ (Clytia hemisphaerica)
CTTTTACATAAAAGTTTTCTACAGGCATGAAACTCTAAAGGTCTATAAGT GAGATTTACACCAGTACTAGTAAAGTTTGGATATGAAAATGTTGATGCAA AAGTTTATTTTGCTGACACTGCATTACTTGGTTATCACAGAATGTCAGAA ACCTGTTAAATCAAAAGGAACAGTGCAGCCTCTGGTGAGTTCACATTAAT TGAAATTGactcaaaaaatgtttgaacACTATTAAGTCTATAATGACTTC ACGACTTTATTTATAATGACTAGGGAAATGGCCTTTAAAGTCGGCTGGTT CAAAGATAGACTTTATACGAAACTAACTTGACTGGGAACTCAAACAGAAA CCTCAAAAAAGTCTTTACACGGTAAAGGTAAGGTAGGTAGGTAAActata tttttatgaattatCTGCGCAAAATACCTACCACAGGACTTTCTGCtaat ttgaacattttcaaacatttcCCAACAAAAACTCATAGCAAAACTCCTCT CATAACTTCTACGTCGAAATTATAACGACGTACCAAGAATGTGTTACAGT GGTGCTGGTCGACCAAGAATGTGTTACAGTGGTGCTGGTCGACCAAGAAT GTGTTACAGTGGTGCTGGTCGACCAAGAATGTGTTACAGTGGTGCTGGTC GACCAAGAATGTGTTACAGCGGTGCTGGTCGACCAAGAATGTGTTACAGC GGTGCTGGTCGACCAAGAATGTGTTACAGCGGTGCTAGTCGAGTTTTCAT TTCCTTATAAGGAGTTTGACTAAAAGAAACGCTCTCCATCAGTAATTTTG AACCTCTCATTAAATCCGTCACTGGTATTTTCTCGACAGGTCTATTTGTT CAAGTATGGGTATGTGTCTACCAACGATTTCACAGAAAATCTACCATTGA AGTCAAATACCATCACAAGTTTCCAAAAGTTTGCAGGCCTCCCCTTGACA GGTAAGAGTATagtgggccattccattttatatggATGCATACGGAGGGC GGGTGTACGAATAATTCCAGGGGTAACCCGGGAAGAATTTTCTTGGGGTC CAAAGGAATTTTTTTCGTCTTTCTAGGAGTTGAAAACTTGCTccagactg attttagttcgtccaccctcagtTAAAAGGTTTTTCTTCACATTTCACGT GAAACGTGAAAAGATTCGTCCATctccctgtatggaaatttaatggaaca ggCCATTTGAAAAACTATCAGGCAAGCTTGTCTCAAAAGTGAGCAATTTG TTTTCAAACATCTTCTTATCGTACTTATGCTAGATTAAAAAATTATGCAT CGTTTGAAAGTTACTTTCAAGGAAAATTGCTTAATTTGACGATGAAGATC ATTTTTCCTACTGGTTTAAAAATAGGGAGTTGGCCGCACTATTTAGAATA CTTAGCCTTCTCATAGGTATTTTGGATGGCAGAACATTTCAACAGATGCG CCAACCAAGATGTGGTATGATCGATGAAGTTGaacaacaaaatgaaaaca agataaaaacaaGTCAAAGAACCACATCATGGCTCTCACTGTTTGACAAG AGAGAGGAGGTCCGTCCAAATTCCATACAGTAAAATACGTCAGAAAAATA ACCGTAACTTTAGCTTCNagcacttgcaaatcgattgtggtttcaaaaca ccccggtgggtttcctttttgtgccaagtttTTCGTCACTGATTGTAGCT TGCAATAATTTTACAGTGAGAGGCTAAAATTTGGGTTGTATGTTGTATGT TGAAGAGTATTTGCGGACCGGACTTCCGATTATTGCGAAAAAGTTACTCT TACAGAGACACAGTCCGGGAAATAGTGACCCaagattaattaaaaaaatt tcatcaccTTAGAGAGACGTTTTTGTCTTTTCATGGTTAACACAAAGAGG GGAAATTCCGACCCTTAGAAAGATTACTGAGACCTTTTGTTCCTACCATT TGAGAGATTTGCGGAGGTAAAAAACCGAActttaccgtccgcacatactc AACACCTATTTTTGTCTTAGTTACCCTCCCCTTGCCCGTTAAAGAGTGAG GATTAGTTATGAGGATCTTCCCTTCCATAAAATCTCTTTACTATAGGTTC TAAGTATACAAGGCTCAGAATTATAATTTCCTATTTGAGATATGTTTGGT AGAAACGTAAGAGGTGAAAGAGAGTACAGAATTAATATTGTGTAATAAta gtttttatctttttcacGTAATAGAAATTGCTAACATGGTCAGTCAAGAA TGGAGGTCAACAGATAACAAAAGCAAAGGTTGTTCACATCATCACGAAAG CATTCAAACTTTGGTCTTCTGCGTGCGATATTCGTTTTAAACAAGTGCGA AACAATCCTGATATTGAAATCAGCTTTCAGAGTCGAGGACATGGCGACGG AAATTATTTTGATGGGAGAGGAGGTAAATATTCGGGGATTTCAGGGATGT TGGAAAAACGAATTTCACCAGTTGGAAACTTGCTTTAGAGACTACTTCAG AATTGATTATTTAATCTCGATTGGAAAACTAACATAACCTCCCATCCCGA TATTAAAAGTATGAAGACCCCCTATGGATATATATTTCAGACGTAGACAa cagaatttgaaatttccgAAAGGGAAGTTtaatatattgaaaaatatcaa atattgaGATCAATTTGACCGAACTGAGGGAAGAAGGTTGAAATTGTAAT GGGAGGGGCGAGCATGATTCCTTCTAGAAAACGATTTGAACTACTCTGAG AGACAGGCAAACATCCCCCCCCGTGACACAATCTTTCAATGGCTACTAAA AATTACTACTTAATTTTACTTATTTATTACAAACCCCTGAAATATTATCC CATAAAGAAACAGGTATCAAATCTTTCTTCAGGAATTCTTGCGCATGCGT TTTACCCACAATCAGGAAAACAAGGTAGTGAAACACTGGTTGGAGATATT CACTTTGATAATGCTGAACAATTTGAAGCTCAAAGTAAAGAGGGACGAAA CTATTTTGTATGGCTTGCTACTCATGAAATTGGTAAGAAAAGAAATACAG AGTTGActatctctaattcgatcttcacgAGACCAAGAGTCGTCTTCGAA TTACGGAGAGTATTTTAATTGACTTGCTAGATTTTGCACGATATCTTTAT CAATTTATAGGTTCGGGTGAAAGAGCTAACTAAATTAAGGAAGCGTTATT TCTACTTGTGACCTTATTGTGATTTATGATCGAAGTAAAACCGAAACGAG AGGGGCAAATCATGCTGAAGCGCTACTGCCATGGCTAACGTTTAAAATCG AATCCGCAATTTCGATGACAGATTCAACAATGCTTTCTTAAATGTTACTT TTACTCCAGCATTGAGTGAAAAAAACGCAGATCGGGCATTCAGCGATAAT GGCTAAGTCCTGaccctaaataaaaaatttgctttCTCTTCATAGGTCAT TCACTTGGACTCCGTCATTCGCAAATCAAAGGCTCAGTTATGTTTCCATG GTACGacaaacaaaaacacaaaatggTTAAACTTCACAAAAGCGATATCC GTGCTCTAAGAAGATTATATAAGAACGTTGAATTGGCCCCACCTACGACC TCAAGTGGCCTTAGTACGCCAAGTACTGATATGAAGACCCCTAGTTTGAT ATTTACAACAAACCCCGAGTCAACTTTGGAGGCTTCTATTGGTCCAATGA GAACAACAGGGACAACAAGAAGTGAAGGAGTTTCAACGAGTAGCGAGGAT TCAACGAGTACTGAGGTTTCAACGACCGGTGAACCTGTCACAACACACGA AACAACACTTTCTTTAACATCCACAGCCACTCCAAAAGGTAGGAGACGAC TTTCCGATGGAAAGTAAAGAGTGGAAAACTGATTTTGTagcatagtgcgg aaaggggtctgatccccccttcttaaatgatccccccttcttgacatccc cccaacctttaaaaatgcctatccccaagGGTTTCGGGCTAaatttttat ggtaaaaagggaagggaaacagtaacGAAAAATTTAGTCTGGCAAATATT ATCcaactttttagtgaaaataaagaacttcctttcatgcagaccaaatt tcataacagtgctggaaaataatctacaatatatgtaagccccccctCCT TGCTACCCcccctttttagtgaaaataaagaacttcctttcatgcagacc aaatttcataacagtgctggaaaataatctacaatatatgtaagcccccc ctCCTTGCTACCCcccctttttagtgaaaatttctgatcccccccttctt cacttttttggaaggtgtcatccccccccccttaagaaaggagGGGGGTC CGAACTATGTGTAGTCTTTACGATTCTAGCAGCTTAACTCTTCTGACTTC TGAGAAACAAGCCTTAAAaatagaaatctttttttcccTCAATAGTCTCA ACAAAATCTGAGTCAGGGGATCCAACAGAAACCCTGCAGACATCGACAAC TAATTACCAGGAGCCCACCGTAGAGACGTCATCAACCATGACAAGCACCA ATCAACCAGCCACTGAATTTAAGGAAGTATCTAACGCAGTGATGGAGGGG TCAAGCATTAACCCTTTTGAATCGAGTACGCAGCCTGCANATTTAAGGAA GTATCTACCGCAGTGATGGAGGGGTCAAGCATTAACCCTTTTGAAGCGAG TACGCAGCCTGCGATGATTATACCTTCCACCACAGAAATCTCATCAACGA TTAACTCAATAGAGacaacaaaatcaaacgaaAATGAGGAAAAAGCAGGA ACTACGAAAGATGTTAATACTTTAACATGTCCAAGAGCTGTCGACCAGAT CGAAGCAGTTTATCACAGCTCGAGATATGGgattactttcgttttcaatg aGAATAACATGCTATCTTTTGTAAGACCGAATTCGTTGGAAGTTCTTGTA GTGAGCAGGTTTAACTACCTACCAAAGATCCGAGATGGCATTGATGCTGT GTTGAATATTGATGGTGAGAATAGAGGGCCATACCAAATCATCTTCTCTG GTGAAAGGTAAGATATCAATGCCATGGAATCTCATATTTAGTGTCTGAGT GTCTGAGTCCAATTGTAGTTCTAGGAAAAACTCataagacaaaaatttgc gtgTGTATTTATTATGGATAAGAACAATAAGACCTTAGTAAGAATATTCA CTGTAATTTAAATATTAGAGCGGGTACCTCAATCGGTCGAGCATTCGCCA AgtgttgtgggttcgatccctggTCACCACCAACTCAGCCGAAAGAGTAG CTTAGATTATTTGCTGTGATATGGGCGGTAAGTAATGGGGATCTGAGTGG CACTCCACTTCAGCATTCAATCTCCCAGGCCTAATGCAAATAGAAAAGAG GATAAActgccaccagatgaatatacttactttacTTACTTAACGAGTAT TATTTTTCAGCTACTATCTTTATCGAGATTTCGTCTCAAACGTTTTCAAG AAGGCTGGACCTTACTCTATACATGATGAGGAAAATCCAATGAACTTTCA ATTCCCAAGATGGGTCAAGAAAATTGATGCAGCAATGACATGGACTTCTG ATGGCATGACCTATTTCTTCACCGGTGAGTTTATTTCTTTCGTCAATTAT TAAAAATTGCTGAATTTGGCTATGATATAGCAAAGAATACTATATGCTCC TGAAATATCAGTTGCAAGTTCAAACCCTCTGGAATTcttttacaaaatta aaaaaattcaacccTATTGAGTTTCAGTTTTGAAGGGTTTTGGTCATCCT CCAAATTTATTAAATTCCATGTGTTTTAGCCCTCCCTTGAGCGATATTTG TAATGGTATTCATAATGGAAAACATCCTCCCTATTCAAATCTCCAAGTCT ACATGCCTGATTGACCTGCTTCTATTGGCAATATTGAATGTGCATGAGTC GTGACATGCAATGGTCCATTCCTCTGAAATGTCCTTATATCAGTCGGTTA AAGCCTTGACTGTACACTCATTCCATTATGTTCCGGAATCTTCACTAACT GAAAGAATGAGGACTACAAAAATAAAAGTTGAATTTCTCTATTAGATGCA CTGTATTGGAAATATGATGCAAAACAAAAGAAGATGGCGGACGGCTatcc aaaacaaatcaaaaccaGATGGGAGGGAATTCCAGATCAAGTCGATGCAG CATTGTCTTCGGAAGATTTGGATGTCACTTATTTCATTTCTGGCGATATG GTCTACATTCTCAATGATAGGTAAAACTTGTTACCATCAGTTCCAAATCT TATGTACCCCCAAGAATGcaactaccttattggaactaattttcgcggga actaattttcgcggtcgaaaaaaaataaccgaaaaattgcatttcgcggg tcttaattttcgcggttttttccattctggaattttcgcgggttttaatt tttgcggttttgcccttttttggacaaatttctttcattttcctagggat ttttcaaatttttcgataaaattggaaacaaattgtatttcgcgggaatt aattttcgcggttctTAACTCTCAgaatttttcgcgggatcaaattttcg cgatttcgacgaaaaaccgcgaaaaacgctaaaattaaaacccgcgaaaa ttagttccaataaggtaaacAAATCCCGTGGTATTCTATTAATCTAAAGT ATACTCTTCGATAATGAAGTGTCTGTTGAGTACTATctactttaaaactt taaaatatatAGCCGATGAAGGAATCGAATCTCCTATGTAGGATTCGAAG CCAATTATTTCCTACATATGTGGTGCGACCCGCACGGTTTTCATACAAAT GATGGACTGGAAATAACATTTACCGGTAGaataataaaaaagtaaaacgc gaaaacaaagaaagtgatAAATTCAAACCGGTCCACTTTAGttttcggct tgaaactcaatgttcaTACCCTATAGCAAAGGaaagttttcttttacttt AGAACTGGTTATGTAAGGGAGACGATGACAGTTGCAGAATTCTTGAAATG CCCATGAAAAAATGACCTTATAACAACAAACAGCAAAGATAAAATACTTA TATTATTATATCCAAAATGCAAAATGCAAAAGAGCCAAAAGAGATGTACA AAGACCAAAACCCTCGAAACCCTCCtccaaactttttttcattattattg AGATCGTTCAACCCAGTGACACAAACGTCAAAAACAATACCATCCAACTT CCAAACAACGTGAGACAACGCTGGGATACTATATAAACTTGCGTCTTACG TTTTGGATCCAGATTTTTATGAGGAACTTTTTCTCCAAAGCAACGGGGAT GTTGTAACAATCTGTCTATTTAAACAATCTGTCTATTTAAACATGAAACA AAGAAATAACTGAAACTTACGTccaaattgaaaaagtttttccatcccca tttATTTCCTGCGTCTATCCGATTCTTTGACAGCAAAATCAATTCCAAAA ATCCAaatcttctttttatttttttacatattcttaGTACAACaataaac taaaagaaaaacagaagaatAAGAAAGATCCATTCCTCGTCGGTTCCAAA AGTTCAGATTTCCTAACGTTCTCATTGAAATATCTTATCATGTATATGTT GCATGAatgtaatattttttgtcaCAATATTTCTACGCTTGCACACTTTC TTTCACTTGTTTGTATATAATATTTCGAAATGACAAGAGATCGAATCTTA TCATGTTTCGGAAAAGAAAGAGCCAATCAAAAACGAGATATAACACAAGT CATTTAAACAGCGCGATTtgattggtaaaaatattgtgAAATAATTTAAG TAGTCAATTTCTTGAATAGGAGGAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00002805TCONS_00002805Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00002805-proteinTCONS_00002805-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000023supercontigsc0000023:403611..411485 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0.06 0.03 0.03 0.03 0.02 0.12 0.13 0.04 0.06 0.07 0.04 0.17 0.03 5.06 2.09 0.3 0.06 20.8 21.39 3.94 5.49 7.28 9.03 0.27 0.16 0.25 0.3