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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00002766 ID=TCONS_00002766|Name=TCONS_00002766|organism=Clytia hemisphaerica|type=transcript|length=885bp
ACAACAACTACATCAATCTGTTACCGGTTATTTGACCAAACAACTTTCCA
GCATTGGCCACAGCTGATGCTTTTTCTCAGCATGATCATTgccttcttct
tcatcaatatAACCAGTATCCTCCTCATAATTGCACttctaaaaacaaac
aaaacattcAACATAGCTACTAAACTATTCATCTATCTACCTTGTTGTGA
TTTGATAACCGGATTCTTAACTGTACCCTTACAAATTACAATGTTAATGC
ATGGCCAGAGCTCTTCTTGTTTGTTGATTGGAATCAACTCATTTTTTAAT
TGCTTCCCACCGACGCTGTCTATGTCAACAATCTCCACAATGTCCATGGT
AAGATACATTGCTATTAAGAAACCGCTGATGAAAATCAGTAATAAGACTG
TCTACTTAATATTGTGCATACACGGAGGAATTGCAATCGCTATTGCAGTT
TGGTATGTTGAAATATCTCTTGTTGGTCGACTTGATGAAGGACTTggcat
ttttcttttctttacaacTGCATATATATCAATAGTTATCGGCAGTGCTG
TTGTGATCAATGTCTTTTTATTTACAACAATACGAGGGAGTCGAAAAAGC
AGCGCCAAAAGAGGCATCGTCTGCAAACAGCAAAGACATCGCGAAGCGAT
CGGGACTTTACTGTTGCTAACCGTTATCTTAGTCATCTGTTATATTCCTG
AAGGAGTTGCATTTTCAATCATTGGGTATAATATTTTCAAAGCCGACGAC
AGTGGGTCACGTGACCTAAGCTATAGACGATATTCACCTTGGGCTCATTA
CGTAATGCTTTTGAATTCCGGATTTAATTCATTAGCCTATATATTGAGAA
CGAGGAAGATCCGAAAGTATTTGACTAATTTATTT Run BLAST on NCBI protein sequence of TCONS_00002766-protein >TCONS_00002766-protein ID=TCONS_00002766-protein|Name=TCONS_00002766-protein|organism=Clytia hemisphaerica|type=polypeptide|length=295bp
TTTTSICYRLFDQTTFQHWPQLMLFLSMIIAFFFINITSILLIIALLKTN
KTFNIATKLFIYLPCCDLITGFLTVPLQITMLMHGQSSSCLLIGINSFFN
CFPPTLSMSTISTMSMVRYIAIKKPLMKISNKTVYLILCIHGGIAIAIAV
WYVEISLVGRLDEGLGIFLFFTTAYISIVIGSAVVINVFLFTTIRGSRKS
SAKRGIVCKQQRHREAIGTLLLLTVILVICYIPEGVAFSIIGYNIFKADD
SGSRDLSYRRYSPWAHYVMLLNSGFNSLAYILRTRKIRKYLTNLF Run BLAST on NCBI transcript from alignment at sc0000021:520508..521392 Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00002766 ID=TCONS_00002766|Name=TCONS_00002766|organism=Clytia hemisphaerica|type=transcript|length=885bp|location=Sequence derived from alignment at sc0000021:520508..521392 (Clytia hemisphaerica)
AAATAAATTAGTCAAATACTTTCGGATCTTCCTCGTTCTCAATATATAGG
CTAATGAATTAAATCCGGAATTCAAAAGCATTACGTAATGAGCCCAAGGT
GAATATCGTCTATAGCTTAGGTCACGTGACCCACTGTCGTCGGCTTTGAA
AATATTATACCCAATGATTGAAAATGCAACTCCTTCAGGAATATAACAGA
TGACTAAGATAACGGTTAGCAACAGTAAAGTCCCGATCGCTTCGCGATGT
CTTTGCTGTTTGCAGACGATGCCTCTTTTGGCGCTGCTTTTTCGACTCCC
TCGTATTGTTGTAAATAAAAAGACATTGATCACAACAGCACTGCCGATAA
CTATTGATATATATGCAgttgtaaagaaaagaaaaatgccAAGTCCTTCA
TCAAGTCGACCAACAAGAGATATTTCAACATACCAAACTGCAATAGCGAT
TGCAATTCCTCCGTGTATGCACAATATTAAGTAGACAGTCTTATTACTGA
TTTTCATCAGCGGTTTCTTAATAGCAATGTATCTTACCATGGACATTGTG
GAGATTGTTGACATAGACAGCGTCGGTGGGAAGCAATTAAAAAATGAGTT
GATTCCAATCAACAAACAAGAAGAGCTCTGGCCATGCATTAACATTGTAA
TTTGTAAGGGTACAGTTAAGAATCCGGTTATCAAATCACAACAAGGTAGA
TAGATGAATAGTTTAGTAGCTATGTTgaatgttttgtttgtttttagaaG
TGCAATTATGAGGAGGATACTGGTTatattgatgaagaagaaggcAATGA
TCATGCTGAGAAAAAGCATCAGCTGTGGCCAATGCTGGAAAGTTGTTTGG
TCAAATAACCGGTAACAGATTGATGTAGTTGTTGT Coding sequence (CDS) from alignment at sc0000021:520508..521392 >TCONS_00002766 ID=TCONS_00002766|Name=TCONS_00002766|organism=Clytia hemisphaerica|type=CDS|length=885bp|location=Sequence derived from alignment at sc0000021:520508..521392 (Clytia hemisphaerica)
AAATAAATTAGTCAAATACTTTCGGATCTTCCTCGTTCTCAATATATAGG
CTAATGAATTAAATCCGGAATTCAAAAGCATTACGTAATGAGCCCAAGGT
GAATATCGTCTATAGCTTAGGTCACGTGACCCACTGTCGTCGGCTTTGAA
AATATTATACCCAATGATTGAAAATGCAACTCCTTCAGGAATATAACAGA
TGACTAAGATAACGGTTAGCAACAGTAAAGTCCCGATCGCTTCGCGATGT
CTTTGCTGTTTGCAGACGATGCCTCTTTTGGCGCTGCTTTTTCGACTCCC
TCGTATTGTTGTAAATAAAAAGACATTGATCACAACAGCACTGCCGATAA
CTATTGATATATATGCAgttgtaaagaaaagaaaaatgccAAGTCCTTCA
TCAAGTCGACCAACAAGAGATATTTCAACATACCAAACTGCAATAGCGAT
TGCAATTCCTCCGTGTATGCACAATATTAAGTAGACAGTCTTATTACTGA
TTTTCATCAGCGGTTTCTTAATAGCAATGTATCTTACCATGGACATTGTG
GAGATTGTTGACATAGACAGCGTCGGTGGGAAGCAATTAAAAAATGAGTT
GATTCCAATCAACAAACAAGAAGAGCTCTGGCCATGCATTAACATTGTAA
TTTGTAAGGGTACAGTTAAGAATCCGGTTATCAAATCACAACAAGGTAGA
TAGATGAATAGTTTAGTAGCTATGTTgaatgttttgtttgtttttagaaG
TGCAATTATGAGGAGGATACTGGTTatattgatgaagaagaaggcAATGA
TCATGCTGAGAAAAAGCATCAGCTGTGGCCAATGCTGGAAAGTTGTTTGG
TCAAATAACCGGTAACAGATTGATGTAGTTGTTGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00002766-exon-sc0000021-1491911889:520508..521392 | TCONS_00002766-exon-sc0000021-1491911889:520508..521392 | Clytia hemisphaerica | exon |
| TCONS_00002766-exon-sc0000021-1510915933:520508..521392 | TCONS_00002766-exon-sc0000021-1510915933:520508..521392 | Clytia hemisphaerica | exon |
| TCONS_00002766-exon-sc0000021-1575043694:520508..521392 | TCONS_00002766-exon-sc0000021-1575043694:520508..521392 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000021 | supercontig | sc0000021:520508..521392 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR017452 | GPCR_Rhodpsn_7TM |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| cellular_component |
GO:0016021 |
integral component of membrane |
Blast
The following BLAST results are available for this feature:
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