TCONS_00002749 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00002749
Unique Name	TCONS_00002749
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1444

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at sc0000021:1076430..1081517-
coding sequence from alignment at sc0000021:1076430..1081517-

transcript sequence

>TCONS_00002749 ID=TCONS_00002749|Name=TCONS_00002749|organism=Clytia hemisphaerica|type=transcript|length=1444bp
tagactttaatgaatgtatcaACGGCCTTGTAAGAACAACTAAACCAAGA
GATTATGCAAAATGATAATCCTCAAAATGTGACTTCCAGATtccagaatt
aaaaaaaaaatatgtactgTATATGGCAGttatgcccaaaacttggcatg
gtttgataaaaagatcattttctccTCACCTTCCAAACATCAGAAAGCAC
AGAGTAAAATAAGTTTCTTCTTGTTTTCAAGCTTACACATTATGCTTGAA
GGAAAGACATTATACCTATTTAATATTGTAAGATATTATGTAGAAGACAA
TGCAAAGAAAACTTTATCGCCAAGATAGTAGTGGTTCTGATACTTACGAG
CCTGATACATCTGGCAAGGTAAAGGAAAAACGTAATGCACATACTGCTGC
TGAGCAGAAAAGGCGTGATGCTATTAAGAATGCATTAGTAAACCTTCAAC
AACTCGTGCCAGGATGTAATAGTTGTGAAATGTCACATGGTATGATCACA
AAGACAAGTAAAGCTCAAGTTCTTCAAAAAGCCATTGAATATGTGACATA
TTTATCTAATGATCGAGACCGCAAAAACGAAGAAATCAATGAGATGGAGA
AAAAGCTGGTTGCGTTAAAGATTGTCAAAGaGAATTATGAAAACCTTGTG
GAATCAAGCCAGCATCACGATAAACCTCAAATATCTGATGAGATGAAACT
TTCTGTGTTCCAACAGTTGATGAGTAGTTTATGGGAGAATTTCAATACCA
CCGTTTCAGTTGGCTCGTTCCAGTCACTCTCTGGTTCTATGATTCGTTGG
GTCGAAGAACATTGTAAACCAGATATTATCAAAACTATCATTGTATCTGC
AATGAAACATCTGTTGGGGCATTGAAGGAAGCGAGACAGTCTCAATATCA
TTCCAAGCTAAGAATTCTTTCCAGAATTGAGGTTATTGCCATGATAAAGT
TTTTAGACAATTCTTGAACATAAACATAGATTTTGTTAATGTGTTTGAAA
AGAGCATTTGAAAATTGATGGGATGATGATGATATTACTACTGGTATTAT
TGGACCTCTGGTTCTAACTAAAAtcgagaaaaatcaaaatattgtaattt
ttttaccGTTATCCTGGAATATGTTTGAGCCATTTATGCCTCTTGATGGA
CACAAACTGGGAAGCTAGTTTAGTTTATTTACAAGCTCGATATAAGGAAT
CTTATATTTTTACGACGAATTCCTTCCAAAACCTTCCATCGTATGCTTTG
GGAAAAAATTGTGTGTATTGAAGTAAAACATGAAAATTGAGTAagcattt
ttccattttgttttttaatttggtGATATTCACCTCATATCGATATTGTA
AATAATTTCATATAATAATACTTTTTTTGTGATTGCCTTTGCTTTTCAAT
GTtagataattattattttttacaaacaaaatattttaatatcc

Run BLAST on NCBI

protein sequence of TCONS_00002749-protein

>TCONS_00002749-protein ID=TCONS_00002749-protein|Name=TCONS_00002749-protein|organism=Clytia hemisphaerica|type=polypeptide|length=191bp
MQRKLYRQDSSGSDTYEPDTSGKVKEKRNAHTAAEQKRRDAIKNALVNLQ
QLVPGCNSCEMSHGMITKTSKAQVLQKAIEYVTYLSNDRDRKNEEINEME
KKLVALKIVKENYENLVESSQHHDKPQISDEMKLSVFQQLMSSLWENFNT
TVSVGSFQSLSGSMIRWVEEHCKPDIIKTIIVSAMKHLLGH

Run BLAST on NCBI

transcript from alignment at sc0000021:1076430..1081517-

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00002749 ID=TCONS_00002749|Name=TCONS_00002749|organism=Clytia hemisphaerica|type=transcript|length=5088bp|location=Sequence derived from alignment at sc0000021:1076430..1081517- (Clytia hemisphaerica)
TAGACTTTAATGAATGTATCAACGGCCTTGTAAGAACAACTAAACCAAGA
GATTATGCAAAATGATAATCCTCAAAATGTGACTTCCAGATTCCAGAATT
AAAAAAAAAATATGTACTGTATATGGCAGTTATGCCCAAAACTTGGCATG
GTTTGATAAAAAGATCATTTTCTCCTCACCTTCCAAACATCAGAAAGCAC
AGAGTAAAATAAGTTTCTTCTTGTTTTCAAGCTTACACATTATGCTGTAA
TTATCTCTCTTTTTTTGTTTTAAACATTTTCATCATCATTATTGCATGTT
TTTGACATACCTTTAAAATCGAACGGAGAGAGAATGAGGATTTTAGAGCC
CACTTACACTCTCTTTGCTTGTTTTAATCCGTTTAACTTTCATTTTTATC
ATTTAACCAGATTTAACGTGTAGAAAGGTCTTTAAATCTAGCTTTACAAA
GCTGATCTTCCACATGGTACAAAAAAAAGTACTTTCGTTTTTGGAATAAA
CGAACTCCAACAGGGAAACTGCAAAAAATTTCAAAGATTCTTTTCTGCTA
GTTTTGTATGTATATTTTACTATTTTATAAAAGACTACATGAGCAGTGGC
AGTATAGATAGGTAACCTATCCTTTGATCAATTTTAAGCATGTAGCTTGT
TTATCAGGGGTTTATGTGGGCGATTTGCACTAAATAGTTGTTTTGGAGAA
CATGGCGGCCTATTGAATAACAAATTACTCCACATACATTACTTTCCTTG
CTCAGCCAAAAAAAATGTGATGAATTATCTTGTCTCTAGGTCTCTGTTGT
GGTATAATTAGTTATTTGATAGGCCGTCACGTTCTCTAAAATATCTATTT
ATGCTGTCTCGTCCAAAATCATATATTTTTCTTAAACAGTGAAGGAAAGA
CATTATACCTATTTAATATTGTAAGATATTATGTAGAAGACAATGCAAAG
AAAACTTTATCGCCAAGGTATGTATGTCACAAAATTAAAAAAAAAATTCT
ACTACCCTACCAATGAAAACTTTGTTGGAGGGTTTTGCTTTGAGCCAAGC
TTGCTTGATATGCATGATGTATTTTTCTGATAAGTCTACTTCCTGACTTC
ATACTTGATCTCAAAACATTGCTAAACTTTTTTGTAGATAATTACAATAC
AATTACAACAATTTTAGAAACTTTTTTCACAATGGGTTAGGTAGACCAAT
TTTTATTCCTGTTCAGCATATGGTCATCAGACCGTGCCCCTCTTTATGAA
AGACTTTTTATAGGACATTTTGAGTCCAAAAATAAGCGGCAAAAATTATG
ACATAATGGCTCCAAATCATTACATTTAACATCAGTATTCTGATAGTATC
AATTTCTTAGCGCTTTAAATCTTCTTTATTGGTTGGTTATATTATGTAAT
GTTTTTGGAGTCATTATCTAATGCTTTTGTCGCTGATGTTTGGAGTCAAA
ATTGTATTGTGTACTACAGAAGGTTTATTATGTAAAATAAAGAAAATTTT
TGTGGCCTTTTGAAAATCCACCAAAAATCACCAAAAGAAATTAAAAATGT
TCTTCATTTTCTCTCTGTATCCAGATAGTAGTGGTTCTGATACTTACGAG
CCTGATACATCTGGCAAGGTAAAGGAAAAACGTAATGCACATACTGCTGC
TGAGCAGAAAAGGCGTGATGCTATTAAGGTATGAATTATACTGTATATAA
TAATACTGTATCTTTTTATATAAATATTCATGTGACAATTAGATTAAAAG
AAATGTGTTGTAAAAATTGAAAGTGGCAAAAGGTAAAGATTTCAGAGTTT
GCATCATTAGCACACAGTTTGATGTTTTATTTTCATTTGTATCGTCTCAA
CTTCATGATCTTATAATTATGCATTTCAACTCTTCACAGAATGCATTAGT
AAACCTTCAACAACTCGTGCCAGGATGTAATAGTTGTGAAATGTCACATG
GTATGATCACAAAGACAAGTAAAGCTCAAGTTCTTCAAAAAGGTACCCAA
ATGACTCTATTCACTTTTTGATAAATAACGAGATTGCTCACGGGAATTTG
TTGACCCGTATTCCGCGCGATCGTGTTTAATCGCCCGCGCGTGTACGCTC
TGTGAATTCTGTCTGCTGTATATGGGTACTGTATGCAAGAAAAAGGAGAT
TGGAGAGTATCCTAACCCCCCAGATGGAAATTCTAATTTCACAGGCACTA
GCAGGGTTTACAGCCCGTTTGCTGCAGTCCCACTAAAGAGTACTGAAAAT
CTCGATGAGTGATCGGCTCCCGCATGTTTGAAATGATCTAAAATCATTTG
TTTAAGAAGTTAATACCTTGACAGGGTAAATAAAATTATACAGATCATGG
CAAATAAAAATATTATTTTATTAATCATTGTTTCCCGGTAAAAACATCCT
GAGTGGCAGAGTGGACAAGGCAATGAGCTGGCTAGAGTGAGGATGTTGTT
TTTGAAAGTTCGAATCCTATACGGTGTGTTGAAGTTTATGTTATTTTGTC
AGCATTGGCCAAACTTTTTCTGGTTTTATGAGCTTTTATTGATATTTTTA
AAAATTCCCATTATAATTTTAAGAAACAAAAATTTTCTAGGTAGTGTCAC
CTCAATGCAGTTTGACTCAAGTACAGTATTTCAAAATGGATCAGGCTGGT
TAGCGGGTAAGAGTCAAGAGTCATGACTTTCCCTTCTCTTGAAAATCCAG
TATTCCAAAACTTTCAACTAAAANGAGTCTAGAGTAGTGACTTCCCTTCT
CTTGAAAATCCAATATTCCAAAACTTTCAACTAAAGAAAATGCATAAAAA
TCGACTTTCGTCTTTTTCTATTATCTTACAAACACTTTTTTCAGAACCAC
AAGTGAAAAAAAAGGAAAACTAACTGCTAAAAAATGATTGACAGGTCTAA
AAATGATTGACAGGTGCGTGTTTGCTTGCGCGGGTTAGAAATTCCCGTGA
GCAATCTCGTTATTTTCAGTATGTCTCTATTCTCTATGTTTGGCTCTTTT
TAAATTTTTTTGCTATTACTATAGCAGCTAAGCAAATGGGGTTAGATTTC
ATGGGAGATCATTGTCTTGGAAATATTGAAAAATTTACTCAACTCAATCA
ACTCAAATTTGCAAATCTAACAAGTACAACACTTTTTTGATGTAAAATTT
TTTAATTTTTTTTCTCTCCAATATTTAGCCATTGAATATGTGACATATTT
ATCTAATGATCGAGACCGCAAAAACGAAGAAATCAATGAGATGGAGAAAA
AGCTGGTTGCGTTAAAGATTGTCAAAGAGTAAAATAACTTTTAAGTTCTA
AGAATATAATTTATTGTATACAAAGTGTGCCTTTTGATATGTTTGCTATA
ATATCTTTGTATACTTGTCCAAAAGTGTTTTAACTAAGTGTTGTAACTTT
CTGGGTTAATGAATTCTGGACATAGCATCTTTTCTCCTCATTTCAGTTCA
ATGAAATGAAAATTATTTTATTAGGTTTTTTTTCCTCAATTTAATCTGAT
TTTAAGGTGCCTTAGATTGTAAATATTTTTTCCTATAAATTTTTTGTTTA
TTATAGGAATTATGAAAACCTTGTGGAATCAAGCCAGGTATAATTGCTTT
TCTTTTTTATATTTCACACATATGAATGCCTAGTGACTAGTGCCTTTACA
TTTATTAAAATAAAACATAGATGTGTGCTAAGCTTACAAAAGTGCAAAAT
GCAAATAATACTTATTACCCTCATTAAAAAAAACCAGGCCACACTTCCAA
ATCTTATTCCACTCTATTTTACATTGAAACGTTTTAAAATAACACTTTGA
ATTATATACTTTATAATTGTAGAGAAAAGACATTATATTTAGATCAAACA
CTTGATCGTTTTAGCGCCTTTTTTGTGTTGTTGGATTTGTTTTACCCTAA
CTGCAATGTTTTTACATACAGACTTACCTGATATACTCCCCTGGCAATAT
GGCATTAACTTGATTTGGTTTCGTTTCTTTTAGCATCACGATAAACCTCA
AATATCTGATGAGATGAAACTTTCTGTGGTAAAATTGATGCAGCGTTTTT
TATTAAGCAGCCTTTAGTTTTTCCAATATTTGGCAGTTACTTTTTAATTT
TAATTATTTTACTGTAAAGCTAACAAAACAGTGAACTGTATTCTATCAAT
TGCTTTACCTTCAGATGAGTGCAACGCCGAAAGATTTGCCCTGATCTAAG
GGATGTAATGTTACAATACCACCACTACCTCAGCAACTCGTCTAAAACTA
AAAAATATTGAAATCTTAAAATTTAAGGGACACAATATCACTTTTTTAAA
GAAAAACAGTATCTGAGTTTACTATTGATTTTGCTTTACTTTATCTTTCA
GTTCCAACAGTTGATGAGTAGTTTATGGGAGAATTTCAATACCACCGTTT
CAGTTGGCTCGTTCCAGTCACTCTCTGGTTCTATGATTCGTTGGGTCGAA
GAACATTGTAAACCAGATATTATCAAAACTATCATTGTATCTGCAATGAA
ACATCTGTTGGGGCATTGAAGGAAGCGAGACAGTCTCAATATCATTCCAA
GCTAAGAATTCTTTCCAGAATTGAGGTTATTGCCATGATAAAGTTTTTAG
ACAATTCTTGAACATAAACATAGATTTTGTTAATGTGTTTGAAAAGAGCA
TTTGAAAATTGATGGGATGATGATGATATTACTACTGGTATTATTGGACC
TCTGGTTCTAACTAAAATCGAGAAAAATCAAAATATTGTAATTTTTTTAC
CGTTATCCTGGAATATGTTTGAGCCATTTATGCCTCTTGATGGACACAAA
CTGGGAAGCTAGTTTAGTTTATTTACAAGCTCGATATAAGGAATCTTATA
TTTTTACGACGAATTCCTTCCAAAACCTTCCATCGTATGCTTTGGGAAAA
AATTGTGTGTATTGAAGTAAAACATGAAAATTGAGTAAGCATTTTTCCAT
TTTGTTTTTTAATTTGGTGATATTCACCTCATATCGATATTGTAAATAAT
TTCATATAATAATACTTTTTTTGTGATTGCCTTTGCTTTTCAATGTTAGA
TAATTATTATTTTTTACAAACAAAATATTTTAATATCC

Coding sequence (CDS) from alignment at sc0000021:1076430..1081517-

>TCONS_00002749 ID=TCONS_00002749|Name=TCONS_00002749|organism=Clytia hemisphaerica|type=CDS|length=4032bp|location=Sequence derived from alignment at sc0000021:1076430..1081517- (Clytia hemisphaerica)
TTCCAACAGTTGATGAGTAGTTTATGGGAGAATTTCAATACCACCGTTTC
AGTTGGCTCGTTCCAGTCACTCTCTGGTTCTATGATTCGTTGGGTCGAAG
AACATTGTAAACCAGATATTATCAAAACTATCATTGTATCTGCAATGAAA
CATCTGTTGGGGCATTGACATCACGATAAACCTCAAATATCTGATGAGAT
GAAACTTTCTGTGGAATTATGAAAACCTTGTGGAATCAAGCCAGCCATTG
AATATGTGACATATTTATCTAATGATCGAGACCGCAAAAACGAAGAAATC
AATGAGATGGAGAAAAAGCTGGTTGCGTTAAAGATTGTCAAAGAAATGCA
TTAGTAAACCTTCAACAACTCGTGCCAGGATGTAATAGTTGTGAAATGTC
ACATGGTATGATCACAAAGACAAGTAAAGCTCAAGTTCTTCAAAAAGATA
GTAGTGGTTCTGATACTTACGAGCCTGATACATCTGGCAAGGTAAAGGAA
AAACGTAATGCACATACTGCTGCTGAGCAGAAAAGGCGTGATGCTATTAA
GATGCAAAGAAAACTTTATCGCCAAGTTCCAACAGTTGATGAGTAGTTTA
TGGGAGAATTTCAATACCACCGTTTCAGTTGGCTCGTTCCAGTCACTCTC
TGGTTCTATGATTCGTTGGGTCGAAGAACATTGTAAACCAGATATTATCA
AAACTATCATTGTATCTGCAATGAAACATCTGTTGGGGCATTGACATCAC
GATAAACCTCAAATATCTGATGAGATGAAACTTTCTGTGGAATTATGAAA
ACCTTGTGGAATCAAGCCAGCCATTGAATATGTGACATATTTATCTAATG
ATCGAGACCGCAAAAACGAAGAAATCAATGAGATGGAGAAAAAGCTGGTT
GCGTTAAAGATTGTCAAAGAAATGCATTAGTAAACCTTCAACAACTCGTG
CCAGGATGTAATAGTTGTGAAATGTCACATGGTATGATCACAAAGACAAG
TAAAGCTCAAGTTCTTCAAAAAGATAGTAGTGGTTCTGATACTTACGAGC
CTGATACATCTGGCAAGGTAAAGGAAAAACGTAATGCACATACTGCTGCT
GAGCAGAAAAGGCGTGATGCTATTAAGATGCAAAGAAAACTTTATCGCCA
AGTTCCAACAGTTGATGAGTAGTTTATGGGAGAATTTCAATACCACCGTT
TCAGTTGGCTCGTTCCAGTCACTCTCTGGTTCTATGATTCGTTGGGTCGA
AGAACATTGTAAACCAGATATTATCAAAACTATCATTGTATCTGCAATGA
AACATCTGTTGGGGCATTGACATCACGATAAACCTCAAATATCTGATGAG
ATGAAACTTTCTGTGGAATTATGAAAACCTTGTGGAATCAAGCCAGCCAT
TGAATATGTGACATATTTATCTAATGATCGAGACCGCAAAAACGAAGAAA
TCAATGAGATGGAGAAAAAGCTGGTTGCGTTAAAGATTGTCAAAGAAATG
CATTAGTAAACCTTCAACAACTCGTGCCAGGATGTAATAGTTGTGAAATG
TCACATGGTATGATCACAAAGACAAGTAAAGCTCAAGTTCTTCAAAAAGA
TAGTAGTGGTTCTGATACTTACGAGCCTGATACATCTGGCAAGGTAAAGG
AAAAACGTAATGCACATACTGCTGCTGAGCAGAAAAGGCGTGATGCTATT
AAGATGCAAAGAAAACTTTATCGCCAAGTTCCAACAGTTGATGAGTAGTT
TATGGGAGAATTTCAATACCACCGTTTCAGTTGGCTCGTTCCAGTCACTC
TCTGGTTCTATGATTCGTTGGGTCGAAGAACATTGTAAACCAGATATTAT
CAAAACTATCATTGTATCTGCAATGAAACATCTGTTGGGGCATTGACATC
ACGATAAACCTCAAATATCTGATGAGATGAAACTTTCTGTGGAATTATGA
AAACCTTGTGGAATCAAGCCAGCCATTGAATATGTGACATATTTATCTAA
TGATCGAGACCGCAAAAACGAAGAAATCAATGAGATGGAGAAAAAGCTGG
TTGCGTTAAAGATTGTCAAAGAAATGCATTAGTAAACCTTCAACAACTCG
TGCCAGGATGTAATAGTTGTGAAATGTCACATGGTATGATCACAAAGACA
AGTAAAGCTCAAGTTCTTCAAAAAGATAGTAGTGGTTCTGATACTTACGA
GCCTGATACATCTGGCAAGGTAAAGGAAAAACGTAATGCACATACTGCTG
CTGAGCAGAAAAGGCGTGATGCTATTAAGATGCAAAGAAAACTTTATCGC
CAAGTTCCAACAGTTGATGAGTAGTTTATGGGAGAATTTCAATACCACCG
TTTCAGTTGGCTCGTTCCAGTCACTCTCTGGTTCTATGATTCGTTGGGTC
GAAGAACATTGTAAACCAGATATTATCAAAACTATCATTGTATCTGCAAT
GAAACATCTGTTGGGGCATTGACATCACGATAAACCTCAAATATCTGATG
AGATGAAACTTTCTGTGGAATTATGAAAACCTTGTGGAATCAAGCCAGCC
ATTGAATATGTGACATATTTATCTAATGATCGAGACCGCAAAAACGAAGA
AATCAATGAGATGGAGAAAAAGCTGGTTGCGTTAAAGATTGTCAAAGAAA
TGCATTAGTAAACCTTCAACAACTCGTGCCAGGATGTAATAGTTGTGAAA
TGTCACATGGTATGATCACAAAGACAAGTAAAGCTCAAGTTCTTCAAAAA
GATAGTAGTGGTTCTGATACTTACGAGCCTGATACATCTGGCAAGGTAAA
GGAAAAACGTAATGCACATACTGCTGCTGAGCAGAAAAGGCGTGATGCTA
TTAAGATGCAAAGAAAACTTTATCGCCAAGTTCCAACAGTTGATGAGTAG
TTTATGGGAGAATTTCAATACCACCGTTTCAGTTGGCTCGTTCCAGTCAC
TCTCTGGTTCTATGATTCGTTGGGTCGAAGAACATTGTAAACCAGATATT
ATCAAAACTATCATTGTATCTGCAATGAAACATCTGTTGGGGCATTGACA
TCACGATAAACCTCAAATATCTGATGAGATGAAACTTTCTGTGGAATTAT
GAAAACCTTGTGGAATCAAGCCAGCCATTGAATATGTGACATATTTATCT
AATGATCGAGACCGCAAAAACGAAGAAATCAATGAGATGGAGAAAAAGCT
GGTTGCGTTAAAGATTGTCAAAGAAATGCATTAGTAAACCTTCAACAACT
CGTGCCAGGATGTAATAGTTGTGAAATGTCACATGGTATGATCACAAAGA
CAAGTAAAGCTCAAGTTCTTCAAAAAGATAGTAGTGGTTCTGATACTTAC
GAGCCTGATACATCTGGCAAGGTAAAGGAAAAACGTAATGCACATACTGC
TGCTGAGCAGAAAAGGCGTGATGCTATTAAGATGCAAAGAAAACTTTATC
GCCAAGTTCCAACAGTTGATGAGTAGTTTATGGGAGAATTTCAATACCAC
CGTTTCAGTTGGCTCGTTCCAGTCACTCTCTGGTTCTATGATTCGTTGGG
TCGAAGAACATTGTAAACCAGATATTATCAAAACTATCATTGTATCTGCA
ATGAAACATCTGTTGGGGCATTGACATCACGATAAACCTCAAATATCTGA
TGAGATGAAACTTTCTGTGGAATTATGAAAACCTTGTGGAATCAAGCCAG
CCATTGAATATGTGACATATTTATCTAATGATCGAGACCGCAAAAACGAA
GAAATCAATGAGATGGAGAAAAAGCTGGTTGCGTTAAAGATTGTCAAAGA
AATGCATTAGTAAACCTTCAACAACTCGTGCCAGGATGTAATAGTTGTGA
AATGTCACATGGTATGATCACAAAGACAAGTAAAGCTCAAGTTCTTCAAA
AAGATAGTAGTGGTTCTGATACTTACGAGCCTGATACATCTGGCAAGGTA
AAGGAAAAACGTAATGCACATACTGCTGCTGAGCAGAAAAGGCGTGATGC
TATTAAGATGCAAAGAAAACTTTATCGCCAAG

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_001477	XLOC_001477	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00002749-protein	TCONS_00002749-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000021	supercontig	sc0000021:1076430..1081517 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
48.9794	47.3424	90.4225	89.5144	44.4734	33.6434	37.8563	38.4487	27.984	22.8786	17.5207	19.7059	15.5518	16.6864	20.7	18.8533	28.8111	28.0274	13.2227	17.2238	26.9971	26.4584	42.5226	41.0848	17.7963	20.1494	25.9188	18.8752	26.1773	22.6423

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR011598	bHLH_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0046983	protein dimerization activity

GO Annotation

GO Assignments

This transcript is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046983	protein dimerization activity

Blast

[Close]

BLAST of TCONS_00002749 vs. Swiss-Prot (Human)
Match: MLX (Max-like protein X OS=Homo sapiens GN=MLX PE=1 SV=2)

HSP 1 Score: 147.517 bits (371), Expect = 5.932e-40
Identity = 74/165 (44.85%), Postives = 111/165 (67.27%), Query Frame = 3

Query:  378 KRNAHTAAEQKRRDAIKNALVNLQQLVPGCNSCEMSHGMITKTSKAQVLQKAIEYVTYLSNDRDRKNEEINEMEKKLVALKIVKENYENLVESSQ---HHDKPQISDEMKLSVFQQLMSSLWENFNTTVSVGSFQSLSGSMIRWVEEHCKPDIIKTIIVSAMKHL 863
            +R AHT AEQKRRDAIK    +LQ +VP C   + S G   K SKA VLQK I+Y+ +L  ++ ++ EE++ + K + ALKI+K NYE +V++ Q   H  + Q+SD++K +VFQ +M SL+++FN ++SV SFQ LS  +  W+EEHCKP  ++ I++  +  L
Sbjct:  130 RRRAHTQAEQKRRDAIKRGYDDLQTIVPTCQQQDFSIGS-QKLSKAIVLQKTIDYIQFLHKEKKKQEEEVSTLRKDVTALKIMKVNYEQIVKAHQDNPHEGEDQVSDQVKFNVFQGIMDSLFQSFNASISVASFQELSACVFSWIEEHCKPQTLREIVIGVLHQL 293

The following BLAST results are available for this feature:

BLAST of TCONS_00002749 vs. Swiss-Prot (Human)

BLAST of TCONS_00002749 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
MLX	5.932e-40	44.85	Max-like protein X OS=Homo sapiens GN=MLX PE=1 SV=...	[more]

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TCONS_00002749 (transcript) - C. hemisphaerica