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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00002732 ID=TCONS_00002732|Name=TCONS_00002732|organism=Clytia hemisphaerica|type=transcript|length=2023bp
GTTTAAGTGTAGATCTTACAGTCAATGATGGCGCAGACAGGAGTTGCTTT
CAGCTACAAGCAATGGCtcaaaaaacgtcaaataaCTACCAAATTATTCT
ACTTTATTGGGCTTATCCTTGGAATTGAGTATTCATTTACATTTGCAACT
TTGCTCGtttatttaaaagatttccttCAAGTCAAAAACAATTCGTTGAA
TATCTTTTATAGTTGCATTTCTGGAATATACATCCTGTCTATGATTATAT
CATCAgttttcattggaaagatatttgacAGAACTCGGCGAANTGTTTAC
TTAAAAGATTTCCTTCAAGTCAAAAacaatttgaatatcttttataGTTG
CATTTCTGGAATATACATCCTGTCTATGATTATATCATCAGttttcgttg
gaaagatatttgacAGAACTCGGCGAACGCGTCTAATATTCAGTTTGATC
TTAACGCTGGTGACAATTGGCAATGTCCTGTATACGATACCGATTTCGCC
TTANCATCTTAGCGCTGGTGACAATTGGCAATGTCCTGTATACGATACCG
ATTTCCCCTTATTTGTTATTATTTGGAAGATTACTGTCCGGTTTAGGGGA
TTGTCTTCGAGCAATCATTGTGGCTGAAGTAGCCCGCTCTTTCGCACCGG
ACGAAGTCGTCTCACAAATATCCGCTGTGTCTTGTACATATGTTGTGGGA
TTTACTCTTGGACCATGTATAAATTCTGCTTTTGTTAGAGcagatttttg
gtttttgggtgtGCATGTAGAATACTCAAACGGAGCTAGCTTAGTGACCT
GCTTTCTTTACATGATTGCcttctttttatcattgttttttgtCAGTGAT
TTATCGAGAGAATTTGACTTAAAAGaagctttaaaaagtttttcagcAGA
AGAATTGGAAGAAGCTTCGTTGGATTCAGAGCAAAAACTCATCACCAATG
AATGTTTTGAATCAGATCAAGAAGAGCAGTCAACTCCTATGATCGAGAAT
AAGTCATCATTTAACACCGATAACGAAATGGAAACCATGTTTGTCTTACG
AAAATTTTTCACCAACCTTGATACAATTTTGATTCTGGTGATGTCTTTTA
CAACCATGCTCTGTGTAGTTGTTTATGACTTATGGGTACCTCTAGCATGC
ATCGAAATCTTAAATTGGACAAACTTGGATATAAATCTTATTTATCTGAC
AAATGGAACCATAAGCTTGTTATTTCTCCTCATATGCATTTTCAAACCAC
CCAAAACTGATAAGATGATTTACTTAGGTTATGCTGCTTTTCCATCAATC
ATGATTATATTTGGagcattctttttctttaagtttGACACTTGGCATAT
AATATGGTTGGATGCCTTTTTATGGCTTGTTACATGTCTCTGTTTAAGCA
TTATTATTACAGCAGAGGAACTGTTTCTGATCNCTCAGAAGGAATACGTC
AATCATCTGCGCGACTTGGAAGCGCCCTAGGTCTGTTTACCGCCGCCTTC
ACCTTTCAGCACCTGAATTATTTTTGTCCATTAGTATTTTTTATatgtat
tttattaattttgctttTGATCATTAGAAGAAGGCAGTTTTATGAGCCTG
TACCAATATTTTAATTGAAACACTTTAAGTAGGGTGTTCTTGcATTTGCT
GTTTTTCTTGAAGGAGATATTCTAATTCTTGGCCATGGAAAGTCGCATGA
CCTTCGCAACCGCGCACTCACGAAAAGTCTAACATTttgaaatggggaaa
ataaaacAACTACAAGCTAGATTTTGCAGGCAGAACCGGCAACCGTGTGG
CACGAAACATAGCGATTAGCATTAGCGATTTTCAATTGCTTTTTTATACC
TTTTAATTAACAATTCTGTGAAAGCAGTGAACtgttatcagatagaataa
TATCTCACTTTGGCTACTTCATCATCTATTCAAATTCactttgttaaaag
tgattattggtcgtaaaaacagtttctcaaaatttgatgcgtggatagaa
atctctttataagggtatgtttg Run BLAST on NCBI transcript from alignment at sc0000021:746825..748901- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00002732 ID=TCONS_00002732|Name=TCONS_00002732|organism=Clytia hemisphaerica|type=transcript|length=2077bp|location=Sequence derived from alignment at sc0000021:746825..748901- (Clytia hemisphaerica)
GTTTAAGTGTAGATCTTACAGTCAATGATGGCGCAGACAGGAGTTGCTTT
CAGCTACAAGCAATGGCTCAAAAAACGTCAAATAACTACCAAATTATTCT
ACTTTATTGGGCTTATCCTTGGAATTGAGTATTCATTTACATTTGCAACT
TTGCTCGTTTATTTAAAAGATTTCCTTCAAGTCAAAAACAATTCGTTGAA
TATCTTTTATAGTTGCATTTCTGGAATATACATCCTGTCTATGATTATAT
CATCAGTTTTCATTGGAAAGATATTTGACAGAACTCGGCGAANTGTTTAC
TTAAAAGATTTCCTTCAAGTCAAAAACAATTTGAATATCTTTTATAGTTG
CATTTCTGGAATATACATCCTGTCTATGATTATATCATCAGTTTTCGTTG
GAAAGATATTTGACAGAACTCGGCGAACGCGTCTAATATTCAGTTTGATC
TTAACGCTGGTGACAATTGGCAATGTCCTGTATACGATACCGATTTCGCC
TTANCATCTTAGCGCTGGTGACAATTGGCAATGTCCTGTATACGATACCG
ATTTCCCCTTATTTGTTATTATTTGGAAGATTACTGTCCGGTTTAGGGGA
TTGTCTTCGAGCAATCATTGTGGCTGAAGTAGCCCGCTCTTTCGCACCGG
ACGAAGTCGTCTCACAAATATCCGCTGTGTCTTGTACATATGTTGTGGGA
TTTACTCTTGGACCATGTATAAATTCTGCTTTTGTTAGAGCAGATTTTTG
GTTTTTGGGTGTGCATGTAGAATACTCAAACGGAGCTAGCTTAGTGACCT
GCTTTCTTTACATGATTGCCTTCTTTTTATCATTGTTTTTTGTCAGTGAT
TTATCGAGAGAATTTGACTTAAAAGAAGCTTTAAAAAGTTTTTCAGCAGA
AGAATTGGAAGAAGCTTCGTTGGATTCAGAGCAAAAACTCATCACCAATG
AATGTTTTGAATCAGATCAAGAAGAGCAGTCAACTCCTATGATCGAGAAT
AAGTCATCATTTAACACCGATAACGAAATGGAAACCATGTTTGTCTTACG
AAAATTTTTCACCAACCTTGATACAATTTTGATTCTGGTGATGTCTTTTA
CAACCATGCTCTGTGTAGTTGTTTATGACTTATGGGTACCTCTAGCATGC
ATCGAAATCTTAAATTGGACAAACTTGGATATAAATCTTATTTATCTGAC
AAATGGAACCATAAGCTTGTTATTTCTCCTCATATGCATTTTCAAACCAC
CCAAAACTGATAAGATGATTTACTTAGGTTATGCTGCTTTTCCATCAATC
ATGATTATATTTGGAGCATTCTTTTTCTTTAAGTTTGACACTTGGCATAT
AATATGGTTGGATGCCTTTTTATGGCTTGTTACATGTCTCTGTTTAAGCA
TTATTATTACAGCAGAGGAACTGTTTCTGATCNCTCAGAAGGAATACGTC
AATCATCTGCGCGACTTGGAAGCGCCCTAGGTCTGTTTACCGCCGCCTTC
ACCTTTCAGCACCTGAATTATTTTTGTCCATTAGTATTTTTTATATGTAT
TTTATTAATTTTGCTTTTGATCATTAGAAGAAGGCAGTTTTATGAGCCTG
TACCAATATTTTAATTGAAACACTTTAAGTAGGGTGTTCTTGCATATTGT
TGTTTTTCTTGAAGGGGATATTTTAATTCTTAGCCAGGNATTCTTACATT
TGCTGTTTTTCTTGAAGGAGATATTCTAATTCTTGGCCATGGAAAGTCGC
ATGACCTTCGCAACCGCGCACTCACGAAAAGTCTAACATTTTGAAATGGG
GAAAATAAAACAACTACAAGCTAGATTTTGCAGGCAGAACCGGCAACCGT
GTGGCACGAAACATAGCGATTAGCATTAGCGATTTTCAATTGCTTTTTTA
TACCTTTTAATTAACAATTCTGTGAAAGCAGTGAACTGTTATCAGATAGA
ATAATATCTCACTTTGGCTACTTCATCATCTATTCAAATTCACTTTGTTA
AAAGTGATTATTGGTCGTAAAAACAGTTTCTCAAAATTTGATGCGTGGAT
AGAAATCTCTTTATAAGGGTATGTTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00002732-exon-sc0000021-1575043694:747259..748901 | TCONS_00002732-exon-sc0000021-1575043694:747259..748901 | Clytia hemisphaerica | exon |
| TCONS_00002732-exon-sc0000021-1575043694:746825..747204 | TCONS_00002732-exon-sc0000021-1575043694:746825..747204 | Clytia hemisphaerica | exon |
| TCONS_00002732-exon-sc0000021-1510915933:747259..748901 | TCONS_00002732-exon-sc0000021-1510915933:747259..748901 | Clytia hemisphaerica | exon |
| TCONS_00002732-exon-sc0000021-1510915933:746825..747204 | TCONS_00002732-exon-sc0000021-1510915933:746825..747204 | Clytia hemisphaerica | exon |
| TCONS_00002732-exon-sc0000021-1491911889:747259..748901 | TCONS_00002732-exon-sc0000021-1491911889:747259..748901 | Clytia hemisphaerica | exon |
| TCONS_00002732-exon-sc0000021-1491911889:746825..747204 | TCONS_00002732-exon-sc0000021-1491911889:746825..747204 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000021 | supercontig | sc0000021:746825..748901 - |
Blast
The following BLAST results are available for this feature:
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