TCONS_00002696 (transcript) - C. hemisphaerica

Overview
NameTCONS_00002696
Unique NameTCONS_00002696
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length130

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00002696 ID=TCONS_00002696|Name=TCONS_00002696|organism=Clytia hemisphaerica|type=transcript|length=130bp
GTCATCATTTTCACCGCTTTCTTAGCTGTTGCCGCCGCCCTCGAGGTTGG
AACCCAAACTGGTACCACACCACCAGCTGTCCCATGCCCAGACTCTCTCT
GCAAAGGAAGAGCTGACGGAAACTACGAAT
Run BLAST on NCBI

transcript from alignment at sc0000021:492696..493024-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00002696 ID=TCONS_00002696|Name=TCONS_00002696|organism=Clytia hemisphaerica|type=transcript|length=329bp|location=Sequence derived from alignment at sc0000021:492696..493024- (Clytia hemisphaerica)
GTCATCATTTTCACCGCTTTCTTAGCTGGTAAGTACTCTTAAAATTTCAA
GAAAATAATTTCGCCGTATAAAAACATAACATCGACGGATGAAAGTATTA
ACTTTGAAAAGGAACCAATTACTGAAGTTATTAATCTATTTCACAAATCA
CTGAATTTTGAAGGTTTAGTTTTTCAAAATTTTTATGGTATAATTCAACT
AAATATTTAATTATCTAAATCTTTCAGTTGCCGCCGCCCTCGAGGTTGGA
ACCCAAACTGGTACCACACCACCAGCTGTCCCATGCCCAGACTCTCTCTG
CAAAGGAAGAGCTGACGGAAACTACGAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001456XLOC_001456Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00002696-exon-sc0000021-1575043694:492997..493024TCONS_00002696-exon-sc0000021-1575043694:492997..493024Clytia hemisphaericaexon
TCONS_00002696-exon-sc0000021-1575043694:492696..492797TCONS_00002696-exon-sc0000021-1575043694:492696..492797Clytia hemisphaericaexon
TCONS_00002696-exon-sc0000021-1510915933:492997..493024TCONS_00002696-exon-sc0000021-1510915933:492997..493024Clytia hemisphaericaexon
TCONS_00002696-exon-sc0000021-1510915933:492696..492797TCONS_00002696-exon-sc0000021-1510915933:492696..492797Clytia hemisphaericaexon
TCONS_00002696-exon-sc0000021-1491911889:492997..493024TCONS_00002696-exon-sc0000021-1491911889:492997..493024Clytia hemisphaericaexon
TCONS_00002696-exon-sc0000021-1491911889:492696..492797TCONS_00002696-exon-sc0000021-1491911889:492696..492797Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000021supercontigsc0000021:492696..493024 -
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00002696 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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