TCONS_00002675 (transcript) - C. hemisphaerica

Overview
NameTCONS_00002675
Unique NameTCONS_00002675
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2727

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00002675 ID=TCONS_00002675|Name=TCONS_00002675|organism=Clytia hemisphaerica|type=transcript|length=2727bp
gtgaaaacaaagaaaataaattagaaattaaagaaagcaatacaaaataa
acaataataataatacaatATGGCAACAACAACCGAAGATGGATCAGTCA
CTTTTGAATCACAAACATTGAATTTGGTTTGCATCGATTCTAGTAAACAC
NGTTTTTCTAATCATGCAATGTCTTGTTTTATACAGTGAACGgaaaataa
caaataaaatttaACAATAGATAATAAAAAACATGGTTGCAACAGAAAAA
CTAAATCTTTTTTGTGTTGACGGTAGTGATATCTGTGCGAAAGCATTTGA
ATGGTATTGCTCAAATTTGCACAGAGATGGTGATACAATTGGTTTAGTAC
ATGTTTACCAAACTCCCGTTGTTCCTGTTCCACTAGGAGGTGACAATATG
ATATATGATGCTGGACTTTATGATCAATTACTTCAAGATGCATTCAAAAC
AAGCCAACATATTCTGGCTAAATACAAAAGCAAATGCACTGATTTGAATA
TAAAACATGAAGAGTTTTTCCAGCACATGAACGACTCAGTTGGTCATACT
ATTTGTAGTATTGCACATGAAAAAGATgccaaaaatattattatggGTCA
AAGAGGGTTAGGTGTTGTGCGCAGAACACTTCTTGGAAGCACAAGTGATT
ATGTTGTGCATCATTCACATCTACCAACAATCATTATACCGCATAAGGAA
TGAAGATTgcattttatatttatttacaaatttattaCCAATACACTTAt
taatattattttaatgtacATTAGAATGAATTTTTAGGAATCCAGCATAA
TAATCATTTTACCAGTGGCCCAGGTCTATCAAAGTCGCCTTATTTAGTAT
TTTCTGGTCATAATTTGGCTATTTGTATCATTTGTTCTGGTCCTGTTAAC
GAATACATCTTCGATTTAATTAGGTTCACTGacactcatttttttctttc
ttttagtgaaaacaaagaaaataaattagaaattaaagaaagcaatacaa
aataaacaataataataatacaatATGGCAACAACAACCGAAGATGGATC
AGTCACTTTTGAATCACAAACATTGAATTTGGTTTGCATCGATTCTAGTA
AACACAGCAAACGTGCTCTTGAATGGTATTTTGACAATCAGCATCGTGAT
GGTGACCAGGTTGGTTTGGTTCATGTTTTTGTGCCTCCTGATCTCCCAGC
TTTCGGTATTTATGcaGGTGGAATGGCTCCTATAAACATGTACCAAGAAA
CATTGCAGGCGGGTATCGAGGACAGTAAAAAGATTGTCGAAGAATACAAA
ACATACTGTTTATCTAAAGGGGTATCACCAAAATATTTCGTGCAGTCTTT
AAATGATTCAATTGGACATACAATTTGTGATattgcaaaacaaaacaaag
ccaAGATGATGGTGCTCGGTCAAAGAGGCCTGGGTGCTATTCGTAGAACA
TTTTTAGGAAGTGTGAGTGACTACGTCATACATCATGCACATATTCCTGT
TTTGATCGTACCTCCAAAATAGTTGTTAAAATTTTTATGAATCACAACCC
CAGCCGAATATTCTTTGAAAAGCTTGTTGTGTAGAGGTGTTTTTTGGAGA
TATTGTCAGCAGCTCGTCACTTCTTGTCATTCATTCACCCTTAGTCAGTA
GATATATTATTTCAAACATATACGACAACCATTAAGtaattttgatttat
atataattttttttattattattaaaatatttttgtagtaATAACTTGTA
CTGTAATTTTTATGtaaatgaaatagaaaatttttctcttCGTCTTGGAA
TTATTGCCTGTCACCTTCCAAAAAGTATTCAAATGTCattctatgttttt
ttttaagtttaaaacaaaaagagaaaataataaatatataataCAAAGAT
GGCTCAGAACATTGAAAAAGTCACATTGAACCTGATCTGTGTAGATGCTT
GTGATCACAGTAAAAGAGCCATGGACTGGTATTTGTCAACACTTCACCGT
GAGGGAGATGACGTCGGTTTAGTTCATATTCATTGTTTACCAGAGCTGCC
TTCATTTGGTTTATATGCTGGTGGTTTAATCGCTACCGATTTGTATCAAG
AGCAAATTAAAGAAAGTATTCAAGCTAGCAAGAAGGTTGTTGAACAATAC
AAAAAGTTCCTCGCGGAGAAAGAGATCACAGCAAAGATCTATTGTCGCAG
TATGATAGATTCAGTTGGTCACACAATATGTGAGATTGCCAAAGAAAGTA
ATGCTACAACCATCATTATGGGTCAACGTGGTTTAGGTGCCATTCGAAGA
ACGTTCTTGGGAAGTACCAGTGACTATGTGTTACATCATGCACATATCCC
TGTGGCAGTTATTCCTCCCAACCAATGAACATCCATGGGAAAGCTCGGCA
GGAAAAGgaaaaagaataaaaagagaaatacaATTAGAAATAAATAATCA
ACTAATTTGAACGAAAACATGTAATGGCATCAAAAGGCAATTTAAACCTG
TTATGTGTCGATGGTAGCTCGCACAGTGATAGGGCTTTTGAATGGTACTC
TTCACATTACCATCGTGAAGGAGATCGTATAGGAATATGCACCATACACG
AGATTCCATATGTTCCTATGGGTTTATATGAGGATGGATTGATGCTCTCA
GAGGCAGCCTATCCACAACTTTTGAATGATAGTGTCAACAAAAGCaaaga
aatttgtgaaaaatttaaacaacgTTC
Run BLAST on NCBI

protein sequence of TCONS_00002675-protein

>TCONS_00002675-protein ID=TCONS_00002675-protein|Name=TCONS_00002675-protein|organism=Clytia hemisphaerica|type=polypeptide|length=165bp
MATTTEDGSVTFESQTLNLVCIDSSKHSKRALEWYFDNQHRDGDQVGLVH
VFVPPDLPAFGIYAGGMAPINMYQETLQAGIEDSKKIVEEYKTYCLSKGV
SPKYFVQSLNDSIGHTICDIAKQNKAKMMVLGQRGLGAIRRTFLGSVSDY
VIHHAHIPVLIVPPK
Run BLAST on NCBI

transcript from alignment at sc0000021:310558..320163-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00002675 ID=TCONS_00002675|Name=TCONS_00002675|organism=Clytia hemisphaerica|type=transcript|length=9606bp|location=Sequence derived from alignment at sc0000021:310558..320163- (Clytia hemisphaerica)
GTGAAAACAAAGAAAATAAATTAGAAATTAAAGAAAGCAATACAAAATAA
ACAATAATAATAATACAATATGGCAACAACAACCGAAGATGGATCAGTCA
CTTTTGAATCACAAACATTGAATTTGGTTTGCATCGATTCTAGTAAACAC
NGTTTTTCTAATCATGCAATGTCTTGTTTTATACAGTGAACGGAAAATAA
CAAATAAAATTTAACAATAGATAATAAAAAACATGGTTGCAACAGAAAAA
CTAAATCTTTTTTGTGTTGACGGTAGTGATATCTGTGCGAAAGCATTTGA
ATGTAAGTAAAAACAATTTCTTTATCAATTTTTGTAAACAATAAAAAGCT
GTTATCTTTCTATCTAAAAACTAATTTAATCGGATTAACTTTCGCGAGAT
TAAATTTTGCAAAATGAAAACACGTGAGATATCTGACTCGCGAAATTAAC
TCTACCACAAAACTTTTTAAATTGCATTTTCGGCTGAGAAACCAGTCCAA
AGTCACCATTTGTGGCAAAAAATGCGCTATTTTCCAGCTGTTTTCAGGCT
TATTCGCGAAATTAAATCCAACCGAAATTTTTCAAAAATTAAATCCAGAA
AATTTCGTGAATTTTTTCGCTTGCGAAATATTTAATCCAATTAAACAATG
AAGTATGAATTTTTCTACAATTCTCTCACGCCAGGGTATTGCTCAAATTT
GCACAGAGATGGTGATACAATTGGTTTAGTACATGTTTACCAAACTCCCG
TTGTTCCTGTTCCACTAGGAGGTATGCTTCATTTCGTATTTGCTAATATC
GGATAAGTTTTCATGTCACTTTCAACAAACTAAAAAGCGATTTTTTTGCT
TCTTTGTTTTCATTTGCCATGCAATCTTTTTTCCAAAATCTTTTCCCTTT
AGCAGGTGACAATATGATATATGATGCTGGACTTTATGATCAATTACTTC
AAGATGCATTCAAAACAAGCCAACATATTCTGGCTAAATACAAAAGCAAA
TGCACTGATTTGAATGTAAGATAGTTTGAAAGCTCCATTTAGTTGATTTT
TTTTCTCCAAAATTTGCTGTTTCAATTTACGTTGGTTGTTCATGATATGT
ACCACTGGAGATTCTTCTGATAATTTGGCATTAGTGTCAGTCTCTATCAT
TCAACAAGAAAACTGATAAATACACCGTTTCGACCGTAGTCGCGCGGTCA
GGCGCGTGCCAATTTAATATCTAATTATCCGCCTAAACTCGATCCAATCC
TTTTTTTACACCTTTTTCTATTGTCTATGAAAAAGGACGGTTATATATTA
TTACGGTTATATATTAAACGGTTTTAGTGGGATAAAGCGGAAAAAGAAAT
GCCCGTGCGGCAATTGGCGGCTACGATCGAAAAGGTGTATTGTTATTATT
GTAACTGCAATTTTTTTCAATACAGCAAATAATAAATCATAAAACCTCAA
TCTTTTTTCAGATAAAACATGAAGAGTTTTTCCAGCACATGAACGACTCA
GTTGGTCATACTATTTGTAGTATTGCACATGAAAAAGATGCCAAAAATAT
TATTATGGGTCAAAGAGGGTTAGGTGTTGTGCGCAGAACACTTCTTGGAA
GCACAAGTGATTATGTTGTGCATCATTCACATCTACCAACAATCATTATA
CCGCATAAGGAATGAAGATTGCATTTTATATTTATTTACAAATTTATTAC
CAATACACTTATTAATATTATTTTAATGTACATTAGAATGAATTTTTAGG
AATCCAGCATAATAATCATTTTACCAGTGGCCCAGGTCTATCAAAGTCGC
CTTATTTAGTATTTTCTGGTCATAATTTGGCTATTTGTATCATTTGTTCT
GGTCCTGTTAACGAATACATCTTCGATTTAATTAGGTTCACTGACACTCA
TTTTTTTCTTTCTTTTAGTGAAAACAAAGAAAATAAATTAGAAATTAAAG
AAAGCAATACAAAATAAACAATAATAATAATACAATATGGCAACAACAAC
CGAAGATGGATCAGTCACTTTTGAATCACAAACATTGAATTTGGTTTGCA
TCGATTCTAGTAAACACAGCAAACGTGCTCTTGAATGTAAGCTACTTGTT
TGATCCTTTTTTCGACCTACCTTGGAGATCCTTTAATTTAACCCATGTTC
GTTCATTCGTTCGTTTAATCCTTTTTTGGACCTACCTGGAGGTCCTTTAA
ATTAACCGATGTTCGTCCGTTACCAGCTTTCCTCGGGATTGGCTCATTAG
TTTCTTCTGATTTTTTGCACAGTGATGCAAAATGGTGATTCCCAAAAAAT
GACGGAGGCCGATTTTCGAAAAAAAACAAATTTAGTGAAAATTAGGGCCA
AAAAGGGCCTAAAAATGGGATTTTTTGGACTTTGTGTGAAACTGCTTCAT
TAGTTTATTCTGATTTTATGCATAAAGATCGAGGGCAAGGTCCTCTAAAA
GGCGGCTGAAGCATTTTTTGGCTGTAAAAATTGGATATGTCATTTTTAGG
GGAAAAGAGCATTTCTCGCGATTGGCTTCTTCATATTTTTTGCTGATTTT
TTGTACAGTAATGCAAATGGTAATTTTTATAAACTGATGAAACCCGATTT
TCAAAAAATAAGTTTTTTGGGCAAATTTGGATCGAAATGAAAATGTACCT
AAAAATGGGGTTTTCTGGACTTTATGTGAAATTGCTTCATCACATTTTTC
TAATTTTTTGGACAAAGATAGAAGGCAAGATTCTCTAAAAAGTGGCTCAA
GCAGTTTTTTCAAAAGTTTTTTTGGCTGTAAAAATCGGATTTTCTTTTGG
GGAAATTCCCTTTTGTCATATTTAGGGAAAATGAGCATTACTCGAGATTG
GCTCGACATTTTTTTGTATTTTTTGCATTGGGACATAAAATGGTAATATT
TCATTTCTGATGGAGCCCGATTTTCAAAAAAATAATCTTTTAGGGCGAAC
TTGGGCTAAAAAGTGCCTAACATGGGTTTTTTGGATTTTGGGGAAAATCA
CCTTTTATCGTCAATAGGGAAATCACGCTAAAATATTTATTCACCCCAGC
ATCTACGACTATAAGTCATACAACTTTAACTATACTTGACAGGTCGATAT
TAATTTGAGCTGTGATACTCACGTTAATCTATTCAAGCTGCTCATCACTA
CACTTTCTTACTCTCTTGCTATTTGTCCTATTTTTATCTGATTCTCATCA
TCAGGTAGGTCCATTCAGCATGTTGCTTGTTCACATTAAATTGACACGGA
TGTGTAGCAAGATTGATCAGAGAGATTCTTTTGTTTATCAACACGAAATC
GAACACAATACAACAATAGGCAGACACTGTCCTGATATGAAAAATGTGTC
TGATATGAAACGGGGACACTTTAAAGGACTACTTAGACTACACAATATAT
TGGTGATCAATATTCGACAATATAGTTTTCGGACTATAATGCACGGGGTA
AATAATAGGTGCTCTATTATAAAAAGGAATTTTCTTTCTGTAAACAATCC
CCCTATATTGTTGAAATATTGCAAATCGTGCTGACAATATATTGCGAACA
TCTTTTCAATATATTGCCGACATTCAGCATATATTCTCAATATATTGCCC
GACAATATATTGTGTAGTGTATGCAGCCCTTAAACAAAAACCTTTAATTT
TCAGGGTATTTTGACAATCAGCATCGTGATGGTGACCAGGTTGGTTTGGT
TCATGTTTTTGTGCCTCCTGATCTCCCAGCTTTCGGTATTTATGGTATGA
AATTTCATTTCCTTAATTATATACAATCCACTCTCCCTAATTCGAACTTC
TACGATTCAAATTGTTCTTTAATTCGAATTAAGGCATTGTTTCCCTTCAG
CTTGAAAGTATTGAAAAATGATTTCTATAATTTGATGCAAAGTCTTAATT
CCTTGAAGATCGAATTAGAGAGAGGCAATTATAGGTACATACAAAAATCA
ACAGCATAGGCGTAGCGCGATACCCTGCAAAATTTATGAGGGAGTGCAGA
CGTTTATGACATATTCATGATTTTTTGATAAAACAAAGACGATAATTACA
GTGTCGTAAAAACCGCTCTCATCCATAAATTTTGAAGGGTATCTCGCTCC
GCCTAGAACAGTCCTAGTTGTATAAATTGAAAAGAGACAATTCATATGAA
GCATTCTCCATATTGTTCCAGTAACGTAGCCAAGGGGGCGCAAAATTTGT
GACACGGTAATTATCTTTTATATTATGAATAGATAATTAAAGAGTAAAAA
TCTGCTCTCCTATACAAATTTTGCCCCTCTTGTCTACGCTACTGTGTGCA
ATATATTGACGAACAATATTCGACAGTAACGTTTAAGCAACAGGTGCTCT
ATTGTAAAAAAGAATTTTCTATCTGTAAACGACCGCCCCTAATATTGTTG
GAATATTGTAAATCAAGCTAGTAATATATCCCAGACATCTTTTTCAATAT
ATTGTGAGCACTTTACAACACACCCCTGTCTCACAGCCCCGGTGGAACTT
TTTTCCACAGGGGATAAAAGTTTCTAATGATATCCCAATAGGGGTGAAAA
TTTTATTGTTCCAAGGTTAAAAAACGGGATGGTTTTGGAGTGCAAGTTTT
AAACATTGAAATCCGAATGGGGATGAAATCAAAGTGAATTTCCGAGTGGG
GGATGAAATTCCAGGGTATTTTTCCCGCTGGGAAAACTGACAGGGGTGTC
TTATTTTACTCAGTAAGTGAACCAGCACTGAGCATTTGTTTATTTTTCAG
CAGGTGGAATGGCTCCTATAAACATGTACCAAGAAACATTGCAGGCGGGT
ATCGAGGACAGTAAAAAGATTGTCGAAGAATACAAAACATACTGTTTATC
TAAAGGGGTATTTATATAATTAAAGTTTGATTTTTAATTGATACAGATAC
CAAATTTTATGTTTTGTGTTATAACCAAAAGATAAGATCAGTGAAAATTA
GTTAAAACCGTTATAACTAGCAAGTATGGAATTCGAGAGATTTTCCAAAT
TTGAAAATTAATCTACTCGCATCGCTATCATAGATTCTGAGACTCGAAAA
TTTCTTATTCATTCTGGTTCGTAGTATTCTGAAATTTGCGATTTTTCTTT
TTAGGTATCACCAAAATATTTCGTGCAGTCTTTAAATGATTCAATTGGAC
ATACAATTTGTGATATTGCAAAACAAAACAAAGCCAAGATGATGGTGCTC
GGTCAAAGAGGCCTGGGTGCTATTCGTAGAACATTTTTAGGAAGTGTGAG
TGACTACGTCATACATCATGCACATATTCCTGTTTTGATCGTACCTCCAA
AATAGTTGTTAAAATTTTTATGAATCACAACCCCAGCCGAATATTCTTTG
AAAAGCTTGTTGTGTAGAGGTGTTTTTTGGAGATATTGTCAGCAGCTCGT
CACTTCTTGTCATTCATTCACCCTTAGTCAGTAGATATATTATTTCAAAC
ATATACGACAACCATTAAGTAATTTTGATTTATATATAATTTTTTTTATT
ATTATTAAAATATTTTTGTAGTAATAACTTGTACTGTAATTTTTATGTAA
ATGAAATAGAAAATTTTTCTCTTCGTCTTGGAATTATTGCCTGTCACCTT
CCAAAAAGTATTCAAATGTCATTCTATGTTTTTTTTTAAGTTTAAAACAA
AAAGAGAAAATAATAAATATATAATACAAAGATGGCTCAGAACATTGAAA
AAGTCACATTGAACCTGATCTGTGTAGATGCTTGTGATCACAGTAAAAGA
GCCATGGACTGTAAGTACTAAATTTTCACTTTCTAATAGAGAGTCAAATT
CCTTCGTTTGAAGTGGAAAATGAAAATTGGAATTTTTGGAGTGACATTGT
TGAGATAACGTCTTTTTTACAATCATGCCCGGGGGGGGGGTACTTAGGCA
AATGGAGGGTACGGTACGGCCGCCCTTAAGGATACCTTTTTTGGATTTCC
AAAGTCCAGCTAAGGGTCGGAAAAATCAGAAAATCAAATTTCAGCCCCAC
TAAGGGTCGGAAAAATAGGAAAATTTCAACTTTTTACCCCCTGAAAGATC
GAAATTTGGTCAAATTTGTCCCGCTAAGGGTCGTAAAATTCCCGAAATTT
TCCTTTGTTTTTTCCTTTTTAGTCCCGGTAGGGGTAGCAAAGTTCGAAAG
TCAGCTCGCAATTTCAATTTGGGAGGGATTGGCAGACTTCCAAGAGGCTA
TATTCTGAGCCTTATTGCTTTTGGATCCTCAGATCCAAAGCTTCCAGGTG
TTAAGTCTAGCGTTAAAGCTCAGAGTTAAAACTCTACCCTTCGAACCTAC
TTTAGAGCACTTACAAATCGATTGTGGTTTCAAAGCTTCCCGGTGAATTT
CCCTTTTTTCTCAAATATTATGACCTTGATTGTAGCATTAACATTGATTA
GTATCATTTTAAAAGTGAATTTACCACTCAATAGCATTCTCTCCACTTGG
CAAAAGTGTCTTAACAGAAACACTTAAATTGTTAATGGGCACGATACTCA
CAGGTACCTCTTGTATGTGAAATTATTATATCTCTTTACTGATTCAGGGT
ATTTGTCAACACTTCACCGTGAGGGAGATGACGTCGGTTTAGTTCATATT
CATTGTTTACCAGAGCTGCCTTCATTTGGTTTATATGGTATAACTTTGTC
TATATATGAGATTTACTTTAAAGGTTTCCGTTTCATATCAGACACATATT
TCATATCAGGACAGTGTCTTGCTATTGTTATATTATGCTGATATAAGCAA
AAAAAGTTTTTATTTTCCTTTTTCTGACCAATCTTGCTCCGCATCCGTGT
CAATCCAATGTAAAAAAGCTAGTGAATTAAAATTGTTGAGTAAGCAACGA
TATCATTCTTATTTAAAAATAAAACCTTTAAGTTACTGCAGATCCATTAT
TAATTGATATAATTTGTCACAGTAATACATTTTAGTGAATTAAATATCCA
TTTTTTCCCATAATGAAAGCTAAACCTTCCTCCTTGCAATCCGGAGGCTA
GCTTTTAGTTGACATCGTGCATATAGTCTTGGATGAGAATTCAAACGAAT
AGGAGTTTAAATCACTAAAAGTGATTACTCTAAAACCCAAGGATATTTTT
GTTCGATTTAATGAAAATTTTAACGAAAACTAATTTACTGAGCAAAGTCA
GCATAGTTTAGTCTGATTTTCATTCTTTTCCTCTACTAGAAATGTTCGAT
TACAAACCGTATAATGCAGAATCCTCCTTTATAGCTGGTGGTTTAATCGC
TACCGATTTGTATCAAGAGCAAATTAAAGAAAGTATTCAAGCTAGCAAGA
AGGTTGTTGAACAATACAAAAAGTTCCTCGCGGAGAAAGAGGTGAGATGA
ACTTGTAGAACTTCTAGGTGGCAAATTAATTAAAATTCAAATACACTCGT
TTATATTATAAATCCACGTAATCCATATTAAATATGNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGAGGTGGA
TTTTTTTCTCTTAATAATTAGCGGGGGGACGTCTATTCGGGAGACAAGAG
TAAATATGGTGACACGGATTGACGTTCTATCTCCTTTCCGCAGTAGTGCC
CATACATAAATCTTTCGAGCTTGCTATATTATCCTTTTGGCTTTAGGTGT
TTCTATATGGAGTATGCAGTGCTGACGAGTCCTAATAAAGACGAAATGCA
TATGCTGCTCTGCCACCCAAATCTCCTGAGTGAATATAGTTGGACAGAAA
TTCTTATTTCTTCACATATATATGTTTTAGTCATATTTACATTCAGTACT
TTTGTTTAGATCACAGCAAAGATCTATTGTCGCAGTATGATAGATTCAGT
TGGTCACACAATATGTGAGATTGCCAAAGAAAGTAATGCTACAACCATCA
TTATGGGTCAACGTGGTTTAGGTGCCATTCGAAGAACGTTCTTGGGAAGT
ACCAGTGACTATGTGTTACATCATGCACATATCCCTGTGGCAGTTATTCC
TCCCAACCAATGAACATCCATGGGAAAGCTCGGCAGGAAAAGGTTTCGAT
GGATTTTATTAATCATAGATTAATAGACTGCTTTTAAAGGACTTTATCAT
CTTTGTAGTATTAAACATTTATTCCTTCTTTATGATCTATATTTAATATG
TAAACCGTAAACAAAATTTTATACTGTAAATACAATTTATCACAATAATG
CATATAAAAATATCATTCAAAACAAGTTGACAGCGTTTTCAATACCTTAG
CCTATAATTTTCTATGAATGTTTTTTGATGTCACTATACTAAATCGGTGA
ATTTTTTTTTGTTTCTCAGGAAAAAGAATAAAAAGAGAAATACAATTAGA
AATAAATAATCAACTAATTTGAACGAAAACATGTAATGGCATCAAAAGGC
AATTTAAACCTGTTATGTGTCGATGGTAGCTCGCACAGTGATAGGGCTTT
TGAATGTGAGTATCCTAATTCTAATTATTATCTTAAACATTATTGAAATT
AATTTTAGAAGGAACTTATTTTGATTTTGACGAGGAAGCTTTTTTCAGTA
AATTCAATATTTTGACACTTTGCAATAGCCGATTTAAGTCTAAACAGAGC
TTTACGCCGAAAAAAAACATTTGGACGGCTTATTCTCAATAGTTGCTTAT
CTGTTCTTTGCTCTTATTGTAATTCAATTCTCTTTATTTTCACAGGGTAC
TCTTCACATTACCATCGTGAAGGAGATCGTATAGGAATATGCACCATACA
CGAGATTCCATATGTTCCTATGGGTTTATATGGTAGGTTTGGTGTTTGGC
TTGGAAAAGATCTAAACTTCCTAATTTTATATCTTTCTTATTCTCCTTTT
ATGGTGACTACAAAGAATGAATGTTGAAAATAGACGATGTTATCGCCCGT
TACAGTGATAGTAAAGGCGGGAAAATATGGCGTTATGGCGGTATACGGAA
AAAATCGGCAGGAGAGTTTCGAAGAAACGACTGGCAACTCTACCGACTGT
TAACTCTTTTCGGCAAAAAAACCCGTTTGCGAATTTTCTTCGGCTTTGGC
CTTTTATTTTTAGATAGTGATTCGTCTTAGACTATAAAATAGTCTAGTTA
AAGCTCCACTTTCGCACGATTACTTTCATCTTACAGAATAGCCTGAGTAT
TCAGGCTGTAGTAAACCTTTTTAAATTATTGATATTTCGGTTAACCGCCT
GGTCTTCCTAAAAGAAGAAAGTTAGCGCATGTCGTGTGTTATTGTTGTGA
AGCTAAAAACTTTCTGACCCTGGGTTTACAATCATCAAGGTAGATCAAGC
TGTGAATAGCAGAAGCATCGCAATAAGAAATAATTTTCAGGCTACTTACT
CTGCTGATATCGATGAGATAATGGTATTTTATTAATCACTTTTTCACATT
TCATTTTAGAGGATGGATTGATGCTCTCAGAGGCAGCCTATCCACAACTT
TTGAATGATAGTGTCAACAAAAGCAAAGAAATTTGTGAAAAATTTAAACA
ACGTTC

Coding sequence (CDS) from alignment at sc0000021:310558..320163-

>TCONS_00002675 ID=TCONS_00002675|Name=TCONS_00002675|organism=Clytia hemisphaerica|type=CDS|length=1992bp|location=Sequence derived from alignment at sc0000021:310558..320163- (Clytia hemisphaerica)
GTATCACCAAAATATTTCGTGCAGTCTTTAAATGATTCAATTGGACATAC
AATTTGTGATATTGCAAAACAAAACAAAGCCAAGATGATGGTGCTCGGTC
AAAGAGGCCTGGGTGCTATTCGTAGAACATTTTTAGGAAGTGTGAGTGAC
TACGTCATACATCATGCACATATTCCTGTTTTGATCGTACCTCCAAAATA
GCAGGTGGAATGGCTCCTATAAACATGTACCAAGAAACATTGCAGGCGGG
TATCGAGGACAGTAAAAAGATTGTCGAAGAATACAAAACATACTGTTTAT
CTAAAGGGGGTATTTTGACAATCAGCATCGTGATGGTGACCAGGTTGGTT
TGGTTCATGTTTTTGTGCCTCCTGATCTCCCAGCTTTCGGTATTTATGAT
GGCAACAACAACCGAAGATGGATCAGTCACTTTTGAATCACAAACATTGA
ATTTGGTTTGCATCGATTCTAGTAAACACAGCAAACGTGCTCTTGAATGT
ATCACCAAAATATTTCGTGCAGTCTTTAAATGATTCAATTGGACATACAA
TTTGTGATATTGCAAAACAAAACAAAGCCAAGATGATGGTGCTCGGTCAA
AGAGGCCTGGGTGCTATTCGTAGAACATTTTTAGGAAGTGTGAGTGACTA
CGTCATACATCATGCACATATTCCTGTTTTGATCGTACCTCCAAAATAGC
AGGTGGAATGGCTCCTATAAACATGTACCAAGAAACATTGCAGGCGGGTA
TCGAGGACAGTAAAAAGATTGTCGAAGAATACAAAACATACTGTTTATCT
AAAGGGGGTATTTTGACAATCAGCATCGTGATGGTGACCAGGTTGGTTTG
GTTCATGTTTTTGTGCCTCCTGATCTCCCAGCTTTCGGTATTTATGATGG
CAACAACAACCGAAGATGGATCAGTCACTTTTGAATCACAAACATTGAAT
TTGGTTTGCATCGATTCTAGTAAACACAGCAAACGTGCTCTTGAATGTAT
CACCAAAATATTTCGTGCAGTCTTTAAATGATTCAATTGGACATACAATT
TGTGATATTGCAAAACAAAACAAAGCCAAGATGATGGTGCTCGGTCAAAG
AGGCCTGGGTGCTATTCGTAGAACATTTTTAGGAAGTGTGAGTGACTACG
TCATACATCATGCACATATTCCTGTTTTGATCGTACCTCCAAAATAGCAG
GTGGAATGGCTCCTATAAACATGTACCAAGAAACATTGCAGGCGGGTATC
GAGGACAGTAAAAAGATTGTCGAAGAATACAAAACATACTGTTTATCTAA
AGGGGGTATTTTGACAATCAGCATCGTGATGGTGACCAGGTTGGTTTGGT
TCATGTTTTTGTGCCTCCTGATCTCCCAGCTTTCGGTATTTATGATGGCA
ACAACAACCGAAGATGGATCAGTCACTTTTGAATCACAAACATTGAATTT
GGTTTGCATCGATTCTAGTAAACACAGCAAACGTGCTCTTGAATGTATCA
CCAAAATATTTCGTGCAGTCTTTAAATGATTCAATTGGACATACAATTTG
TGATATTGCAAAACAAAACAAAGCCAAGATGATGGTGCTCGGTCAAAGAG
GCCTGGGTGCTATTCGTAGAACATTTTTAGGAAGTGTGAGTGACTACGTC
ATACATCATGCACATATTCCTGTTTTGATCGTACCTCCAAAATAGCAGGT
GGAATGGCTCCTATAAACATGTACCAAGAAACATTGCAGGCGGGTATCGA
GGACAGTAAAAAGATTGTCGAAGAATACAAAACATACTGTTTATCTAAAG
GGGGTATTTTGACAATCAGCATCGTGATGGTGACCAGGTTGGTTTGGTTC
ATGTTTTTGTGCCTCCTGATCTCCCAGCTTTCGGTATTTATGATGGCAAC
AACAACCGAAGATGGATCAGTCACTTTTGAATCACAAACATTGAATTTGG
TTTGCATCGATTCTAGTAAACACAGCAAACGTGCTCTTGAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001448XLOC_001448Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00002675-exon-sc0000021-1575043694:319862..320163TCONS_00002675-exon-sc0000021-1575043694:319862..320163Clytia hemisphaericaexon
TCONS_00002675-exon-sc0000021-1575043694:319393..319479TCONS_00002675-exon-sc0000021-1575043694:319393..319479Clytia hemisphaericaexon
TCONS_00002675-exon-sc0000021-1575043694:319149..319258TCONS_00002675-exon-sc0000021-1575043694:319149..319258Clytia hemisphaericaexon
TCONS_00002675-exon-sc0000021-1575043694:318078..318702TCONS_00002675-exon-sc0000021-1575043694:318078..318702Clytia hemisphaericaexon
TCONS_00002675-exon-sc0000021-1575043694:316420..316509TCONS_00002675-exon-sc0000021-1575043694:316420..316509Clytia hemisphaericaexon
TCONS_00002675-exon-sc0000021-1575043694:315307..315413TCONS_00002675-exon-sc0000021-1575043694:315307..315413Clytia hemisphaericaexon
TCONS_00002675-exon-sc0000021-1575043694:314404..315059TCONS_00002675-exon-sc0000021-1575043694:314404..315059Clytia hemisphaericaexon
TCONS_00002675-exon-sc0000021-1575043694:313527..313616TCONS_00002675-exon-sc0000021-1575043694:313527..313616Clytia hemisphaericaexon
TCONS_00002675-exon-sc0000021-1575043694:312823..312929TCONS_00002675-exon-sc0000021-1575043694:312823..312929Clytia hemisphaericaexon
TCONS_00002675-exon-sc0000021-1575043694:312022..312254TCONS_00002675-exon-sc0000021-1575043694:312022..312254Clytia hemisphaericaexon
TCONS_00002675-exon-sc0000021-1575043694:311609..311744TCONS_00002675-exon-sc0000021-1575043694:311609..311744Clytia hemisphaericaexon
TCONS_00002675-exon-sc0000021-1575043694:311282..311368TCONS_00002675-exon-sc0000021-1575043694:311282..311368Clytia hemisphaericaexon
TCONS_00002675-exon-sc0000021-1575043694:310558..310654TCONS_00002675-exon-sc0000021-1575043694:310558..310654Clytia hemisphaericaexon
TCONS_00002675-exon-sc0000021-1510915933:319862..320163TCONS_00002675-exon-sc0000021-1510915933:319862..320163Clytia hemisphaericaexon
TCONS_00002675-exon-sc0000021-1510915933:319393..319479TCONS_00002675-exon-sc0000021-1510915933:319393..319479Clytia hemisphaericaexon
TCONS_00002675-exon-sc0000021-1510915933:319149..319258TCONS_00002675-exon-sc0000021-1510915933:319149..319258Clytia hemisphaericaexon
TCONS_00002675-exon-sc0000021-1510915933:318078..318702TCONS_00002675-exon-sc0000021-1510915933:318078..318702Clytia hemisphaericaexon
TCONS_00002675-exon-sc0000021-1510915933:316420..316509TCONS_00002675-exon-sc0000021-1510915933:316420..316509Clytia hemisphaericaexon
TCONS_00002675-exon-sc0000021-1510915933:315307..315413TCONS_00002675-exon-sc0000021-1510915933:315307..315413Clytia hemisphaericaexon
TCONS_00002675-exon-sc0000021-1510915933:314404..315059TCONS_00002675-exon-sc0000021-1510915933:314404..315059Clytia hemisphaericaexon
TCONS_00002675-exon-sc0000021-1510915933:313527..313616TCONS_00002675-exon-sc0000021-1510915933:313527..313616Clytia hemisphaericaexon
TCONS_00002675-exon-sc0000021-1510915933:312823..312929TCONS_00002675-exon-sc0000021-1510915933:312823..312929Clytia hemisphaericaexon
TCONS_00002675-exon-sc0000021-1510915933:312022..312254TCONS_00002675-exon-sc0000021-1510915933:312022..312254Clytia hemisphaericaexon
TCONS_00002675-exon-sc0000021-1510915933:311609..311744TCONS_00002675-exon-sc0000021-1510915933:311609..311744Clytia hemisphaericaexon
TCONS_00002675-exon-sc0000021-1510915933:311282..311368TCONS_00002675-exon-sc0000021-1510915933:311282..311368Clytia hemisphaericaexon
TCONS_00002675-exon-sc0000021-1510915933:310558..310654TCONS_00002675-exon-sc0000021-1510915933:310558..310654Clytia hemisphaericaexon
TCONS_00002675-exon-sc0000021-1491911889:319862..320163TCONS_00002675-exon-sc0000021-1491911889:319862..320163Clytia hemisphaericaexon
TCONS_00002675-exon-sc0000021-1491911889:319393..319479TCONS_00002675-exon-sc0000021-1491911889:319393..319479Clytia hemisphaericaexon
TCONS_00002675-exon-sc0000021-1491911889:319149..319258TCONS_00002675-exon-sc0000021-1491911889:319149..319258Clytia hemisphaericaexon
TCONS_00002675-exon-sc0000021-1491911889:318078..318702TCONS_00002675-exon-sc0000021-1491911889:318078..318702Clytia hemisphaericaexon
TCONS_00002675-exon-sc0000021-1491911889:316420..316509TCONS_00002675-exon-sc0000021-1491911889:316420..316509Clytia hemisphaericaexon
TCONS_00002675-exon-sc0000021-1491911889:315307..315413TCONS_00002675-exon-sc0000021-1491911889:315307..315413Clytia hemisphaericaexon
TCONS_00002675-exon-sc0000021-1491911889:314404..315059TCONS_00002675-exon-sc0000021-1491911889:314404..315059Clytia hemisphaericaexon
TCONS_00002675-exon-sc0000021-1491911889:313527..313616TCONS_00002675-exon-sc0000021-1491911889:313527..313616Clytia hemisphaericaexon
TCONS_00002675-exon-sc0000021-1491911889:312823..312929TCONS_00002675-exon-sc0000021-1491911889:312823..312929Clytia hemisphaericaexon
TCONS_00002675-exon-sc0000021-1491911889:312022..312254TCONS_00002675-exon-sc0000021-1491911889:312022..312254Clytia hemisphaericaexon
TCONS_00002675-exon-sc0000021-1491911889:311609..311744TCONS_00002675-exon-sc0000021-1491911889:311609..311744Clytia hemisphaericaexon
TCONS_00002675-exon-sc0000021-1491911889:311282..311368TCONS_00002675-exon-sc0000021-1491911889:311282..311368Clytia hemisphaericaexon
TCONS_00002675-exon-sc0000021-1491911889:310558..310654TCONS_00002675-exon-sc0000021-1491911889:310558..310654Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00002675-proteinTCONS_00002675-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000021supercontigsc0000021:310558..320163 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
23.4047	24.6879	17.9719	16.0439	0.837285	1.31501	0	0.598119	0.738596	1.96476	1.41916	2.04269	1.87835	1.64184	3.16634	3.23383	2.52337	2.22378	1.175	2.43156	1.31142	0.732952	8.77241	7.86715	0	0.355873	0.19758	0.531446	2.43112	3.62654
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR006015Universal_stress_UspA
IPR006016UspA
IPR014729Rossmann-like_a/b/a_fold
Vocabulary: Biological Process
TermDefinition
GO:0006950response to stress
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006950 response to stress
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00002675 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top