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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00002646 ID=TCONS_00002646|Name=TCONS_00002646|organism=Clytia hemisphaerica|type=transcript|length=1365bp
CTTTTGTTAAATCATCTTTCAATTTGTGTATTTCCTTAATTATCATACGT
TTTCCAAATACTATTCACAAGTCGTTTACAAAATcataattaaattttaa
atttaagaaTATAAATCAAATCTTGCTTCGTCTCTCTACATgtgctactt
tacaatttgtacaAATTTCCTTGCTCTTTTAATTTAGGCAAGTTCTTATT
CCCAAATTTCCAATATGGGACTTAATGAGTCACATTCAttacatattttc
tttttaatattcAAGTACTATTTACAATAAATTCTAACCTAACTATGGTG
ACCCAAAATAAATTGAtcttttttaagcattttttcaCTCAGAAAAATTT
ATATTGCAGACCAGTctaaatcgcagacctctagCAGACTGCGGGTAGTG
AAAAATTCATATTTACGACAGTCTAAATCACAGACCGGAATAATCACAGA
TTCCTTAGTGGGCCAGCATTTTTAATACCATATCCCTAGGGGGGAGAGTC
CAGCCTATACTCCAGGCCTAAATTTATGATGGAGGAAGGATTCTTTCGTT
CAAAACTAGACTACTGAATCGAAATAGGCTAATCCAGTGCCAATATTTAT
TTGAGAGATATGAGCGTTGTTATAAAACTActcgctttttttataagaat
acactttataagaatggcCAGAACAactaagaataatgctaagaatatca
ccattatggaattttgctactcaagctaagaatgccatttttagagcatt
ttcaattataaattgttaattatccccaagtaaggctcactcctttcaca
aaaatgccatattatgcttgagacgtatgtactaaatgttaaatctagtc
tgaattaggatcctaacctaagatggcagtaagaatattttaggatgatt
ttcccaaaaagttaagaatatccatgatgaaatggagtTACACCATTCtc
attaaaaaaagcgtgtaataaaTCATCCAATCCAGATGCATTCAGTGCCc
caattttatataaaaaccaATTTTATCGTCTATTTTGCTACTGCTGTTGT
AAGTCCAAATTCTTGAACCTTGACCAACTCAAATATTTAATACCCTCTCG
GCATTTTCACCACCATTTATCAAAACAACACCGCATCATAAAAACAAACC
ATCATCAATCGAATTCTGGAGGTTGATACCTATGGTTAACTTGTGAGTTC
TTAGCTGGTATTAAGGGTAACGCCCTTTTCTTGTGTGGAACATCTTTGAT
GAAATATTCTGAAGAGTCCACATAACGTGTGGTCCATTTCTCATCATCAT
ATTCTTGTCCATCTGCGGTACTGGCTCCATCTTTCATGGGTGGCACGAAA
CGGCCGTGATAACGC Run BLAST on NCBI transcript from alignment at sc0000021:835340..836767+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00002646 ID=TCONS_00002646|Name=TCONS_00002646|organism=Clytia hemisphaerica|type=transcript|length=1428bp|location=Sequence derived from alignment at sc0000021:835340..836767+ (Clytia hemisphaerica)
CTTTTGTTAAATCATCTTTCAATTTGTGTATTTCCTTAATTATCATACGT
TTTCCAAATACTATTCACAAGTCGTTTACAAAATcataattaaattttaa
atttaagaaTATAAATCAAATCTTGCTTCGTCTCTCTACATgtgctactt
tacaatttgtacaAATTTCCTTGCTCTTTTAATTTAGGCAAGTTCTTATT
CCCAAATTTCCAATATGGGACTTAATGAGTCACATTCATTacgtattttc
tttttaatattcAANTTCCCAAATTTCCAATATGGGACTTTATGACTCAC
AttacatattttctttttaatattcAAGTACTATTTACAATAAATTCTAA
CCTAACTATGGTGACCCAAAATAAATTGAtcttttttaagcattttttca
CTCAGAAAAATTTATATTGCAGACCAGTctaaatcgcagacctctagCAG
ACTGCGGGTAGTGAAAAATTCATATTTACGACAGTCTAAATCACAGACCG
GAATAATCACAGATTCCTTAGTGGGCCAGCATTTTTAATACCATATCCCT
AGGGGGGAGAGTCCAGCCTATACTCCAGGCCTAAATTTATGATGGAGGAA
GGATTCTTTCGTTCAAAACTAGACTACTGAATCGAAATAGGCTAATCCAG
TGCCAATATTTATTTGAGAGATATGAGCGTTGTTATAAAACTActcgctt
tttttataagaatacactttataagaatggcCAGAACAactaagaataat
gctaagaatatcaccattatggaattttgctactcaagctaagaatgcca
tttttagagcattttcaattataaattgttaattatccccaagtaaggct
cactcctttcacaaaaatgccatattatgcttgagacgtatgtactaaat
gttaaatctagtctgaattaggatcctaacctaagatggcagtaagaata
ttttaggatgattttcccaaaaagttaagaatatccatgatgaaatggag
tTACACCATTCtcattaaaaaaagcgtgtaataaaTCATCCAATCCAGAT
GCATTCAGTGCCccaattttatataaaaaccaATTTTATCGTCTATTTTG
CTACTGCTGTTGTAAGTCCAAATTCTTGAACCTTGACCAACTCAAATATT
TAATACCCTCTCGGCATTTTCACCACCATTTATCAAAACAACACCGCATC
ATAAAAACAAACCATCATCAATCGAATTCTGGAGGTTGATACCTATGGTT
AACTTGTGAGTTCTTAGCTGGTATTAAGGGTAACGCCCTTTTCTTGTGTG
GAACATCTTTGATGAAATATTCTGAAGAGTCCACATAACGTGTGGTCCAT
TTCTCATCATCATATTCTTGTCCATCTGCGGTACTGGCTCCATCTTTCAT
GGGTGGCACGAAACGGCCGTGATAACGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00002646-exon-sc0000021-1491911889:835340..835576 | TCONS_00002646-exon-sc0000021-1491911889:835340..835576 | Clytia hemisphaerica | exon |
| TCONS_00002646-exon-sc0000021-1510915933:835340..835576 | TCONS_00002646-exon-sc0000021-1510915933:835340..835576 | Clytia hemisphaerica | exon |
| TCONS_00002646-exon-sc0000021-1575043694:835340..835576 | TCONS_00002646-exon-sc0000021-1575043694:835340..835576 | Clytia hemisphaerica | exon |
| TCONS_00002646-exon-sc0000021-1491911889:835640..836767 | TCONS_00002646-exon-sc0000021-1491911889:835640..836767 | Clytia hemisphaerica | exon |
| TCONS_00002646-exon-sc0000021-1510915933:835640..836767 | TCONS_00002646-exon-sc0000021-1510915933:835640..836767 | Clytia hemisphaerica | exon |
| TCONS_00002646-exon-sc0000021-1575043694:835640..836767 | TCONS_00002646-exon-sc0000021-1575043694:835640..836767 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000021 | supercontig | sc0000021:835340..836767 + |
Blast
The following BLAST results are available for this feature:
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