TCONS_00002598 (transcript) - C. hemisphaerica

Overview
NameTCONS_00002598
Unique NameTCONS_00002598
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1860

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00002598 ID=TCONS_00002598|Name=TCONS_00002598|organism=Clytia hemisphaerica|type=transcript|length=1860bp
ggattttttttcagtcacaAAGGGTTGATGTGTTAATGAAAGCATAAAGA
AGAAAGAGTCACATTGCGTTCGCTTATAATACACCATTTATTTGACATca
ggaaaaagaagacattcgaATCACTATTTCAAAGATAGATCTCTCAAGaa
aaacaacCACCAAAGGTGCAGAATGTCAATGAACAATGTCACTATTTCTA
CAGCCGCCCTCGATACACCCAACACCACCCTTCTACCGCAAACAGCCACC
TGTTTTCATATCATGGACGAAGCAAATATGACACCTCATTTTAAAGTCAC
CTACATCACCATTTTGGCAATCTCCTTCATTTTCATCACCGTTGTGAATA
CCTTCCTCGTCATTGGTTTAAAACGGGCTTACACAAACCTAACGTTATCC
AAAAAATTGTTCCTATATCTCTCAGCTAGTGATTTGGTAACAGGAATCGT
GACAATACCTTATCAAGGAGTTATGGTAATATATGGTTCCAGTGCTTCCT
GCTTCCAAGTCCAGCTGCAATCTTTTACCAATACCTTTTCTCCTGGTCTA
TCAATGTTTACAATTCTAACAATCTCGATAGCCAGATATATCTCCGTTAT
CAAACCAACCTTTTTCAAGAGTCATGCTAACAGCTCATGGGTATCTGTTT
ATATGTTTGGGCAAATTGTTTTAGCAGCCTCAGCGGCTGTTTGGTATGCC
ACAGCTACTACCAGGGTACATTTAGGATCTTATCTGGTTTTCGTGACAGG
TGTATGCTTTGTTGTTATCGGAGGAGCTATTattcttaacgtgttcttat
ttaTCAAACTACGTTCATCTCACGATTCCACAAAAAAGGATTACCAAAAA
GAAGTCATCAAAACTTTGATTATTATCTCCGTCATATTATTCATCTGTTT
TCTCCCTAATGGTGTCGTGTTTGCGTTGGTCGGTTATTACATAATGGCGG
ATATTGATAATATGGAGTTATACACAAAATTGATACCCTGGGTTTACGTA
CCGATTTTGTTAAATGCTGGTTTGAACTCTTGTGTTTATATCTGGCGTGA
TAAGAAAATTAATCGTTATTTGAGGAAGTCAATTCATAATGAGCAGCGAC
GGTTGAGTAATAAATTCAATCCTCTTTCCAGTCCTCTGCCAATCACCAAT
AAGAGACTGGAAGCGATTTTGAGTGACCACGCTAACCGTGATTCGTCTTA
TGAATCATACGAACATTCTGAAGTTTgagtagtctagcaagctagacgac
taattcatacatagtagaaataaagcaaaaagtaataaagggagaaattt
tagtcgtctagaaacctttgtgcactaacaccaaacaaaagaaaagtgtc
aatattGCAATTATAATTTTTTCCTGCTCAAAATAATTCTTGAGAAAAAA
AATATGAGTGGATTTGTGTATTGAAAGTTTTTCATTTGAGTTGATTTCGT
TTTGAGAGTTTGTTGTTGCTTGATAAATTGTTTTCTCGCAACGCAAGTTT
CTGCGTAGCTAGCCCCTGTATCTATAAGGCTGGAACACCGGAttcttcca
gtcgtttatacaaactaaatcccgtattattattattattagtattggta
ttattagtattacacgcattataaacgactccagtctaaagtTTGAGTCA
AATTGATGTGAAGGATGGGACTATgtacatttatttatttatttaaattg
AACCACTCCACGTCCGTGGGCAAACTACAAATGTTTTACAAAACTAAACT
TGTAAAATACCTAGTTTGTAAATTCCCATTTCCGTAAGTTATCCATCCCG
CTTCAAATTGGATAGtcgcaaaaaaagaaatttttcaaacatacagtact
ttaagggaag
Run BLAST on NCBI

protein sequence of TCONS_00002598-protein

>TCONS_00002598-protein ID=TCONS_00002598-protein|Name=TCONS_00002598-protein|organism=Clytia hemisphaerica|type=polypeptide|length=351bp
MSMNNVTISTAALDTPNTTLLPQTATCFHIMDEANMTPHFKVTYITILAI
SFIFITVVNTFLVIGLKRAYTNLTLSKKLFLYLSASDLVTGIVTIPYQGV
MVIYGSSASCFQVQLQSFTNTFSPGLSMFTILTISIARYISVIKPTFFKS
HANSSWVSVYMFGQIVLAASAAVWYATATTRVHLGSYLVFVTGVCFVVIG
GAIILNVFLFIKLRSSHDSTKKDYQKEVIKTLIIISVILFICFLPNGVVF
ALVGYYIMADIDNMELYTKLIPWVYVPILLNAGLNSCVYIWRDKKINRYL
RKSIHNEQRRLSNKFNPLSSPLPITNKRLEAILSDHANRDSSYESYEHSE
V
Run BLAST on NCBI

transcript from alignment at sc0000021:135866..143258+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00002598 ID=TCONS_00002598|Name=TCONS_00002598|organism=Clytia hemisphaerica|type=transcript|length=7393bp|location=Sequence derived from alignment at sc0000021:135866..143258+ (Clytia hemisphaerica)
ggattttttttcagtcacaAAGGTAAACTTCTTGAATGTGTTCCTTTTGC ATGCAATGAACATTGAATCTGATTTTATCTCTTGAAAAGCATTGCGTTGA GAGCTTTGCTTAATCCGCACTCTATTACCCAGGAACGTTTTTATCctaca atcagcgccgaaatatattggtaATTTTAGGTATTtgaacgtttttcaga atttaaagcttgATCGagagtctaatgttaaaactcagagttaaaaatct tctttctaatcgtactttaaagcacttaaaaatctcttgcggttttaaag ttttgaggtaaTTCCCTTTTTCTGCCAAATATTATGGCGGTGATTGTAGA AGAGCCCATACTTATCAGAATCGAACTTTGATTTATTTAGAGAATCAAAT CCTTTGATCATTTTTAAGTAATTAATACTTGGTTGATATTTCATTCAACA AAGTTATGGTCAACAAGCGATGTGCACTCCTCAGTATTATATCAAGATAT GATACCAAGATTCTGGCCTATGGAAGCATTATGGGAATGTGACACTGTCA TGATAATAGTTAAAAGATTGAAACTCAAGAATCATTCATAACGCCTGTTT TAATTAAGTTTTCATGCAGATttattctaccatttttaattttgtcaaat ttttctgCTGTTTAGGGTTGATGTGTTAATGAAAGCATAAAGAAGAAAGA GTCACATTGCGTTGTAAGGTTTGGTTTCTTTTTGATTCTCTGGGAAAATA TGCTTTTACATTGACTTTAGTTTTTTTGCCATCATAAATGGTTTAAAAAA TAGTCTCCTTGAACAGTATATAAGATATATAACCTTAGAAAAACCTCAAA GTGACTTCCAGATACCAAGTATCCACCTCTCTAAACAtacggaaatttca aaattcattactGATACTAGGCTAGATACTTGAGATATATTCTTCCCCCT TAATTTTGTTATCTAATCAATGGAAATTTCGTACTAAtaattttattcaa tctttatttTTAGCGCTTATAATACACCATTTATTTGACATcaggaaaaa gaagacattcgaATCACTATTTCAAAGATAGATCTCTCAAGGTATTGTTA TTTTTCTATTCTTGATTTAAGATAACGTCATGTTTTCTAACAGAACCACT CGTAAAAAAACGGATTTTGACCATCGTGTTTCTTTATTTAAGGAACAGAG AGGGGTCACccttttttcgggtgtttctgtTAGGAAAATGACTTACACAA AATGGAGAATTCAATTTCGATCTTCATCATGAAAATCTTGCCAAGGCAAA GCAAATATTTGTCACATATTAACACGGAGATGGTAAACTTTGATTCATGA AGCAATACTTCGTCGCATGGCAACCGAGTTGAACCGAACAAATTTTATTT AACATTACTAAGAtcggttttttttttgtatttttgtttatttgagtTTG GATTGTTTTCGTTATTTGTATTCTGTGAATCGTTTTAGCATTTTGCAAAG TGTATAGGTATGTTGCATACAAGctttcgcaagcagaaacttcgcagaaa aatcgcgaaatttacgcaaaaaaataaattcgggaaaatcgctaaaattt ctgcTCACGCAGGTATGTACGCCTAGAGCatggaaaattttactttgcCT CTAGAGGGAATCTCcaaatacaaaattttaaataaaagaaatcattttca tcaaaaggaGCTGGACGCTATCTTGAAAGTTGGAGACAAGATTTTGTAGA TAAGATatccactgggaaattgaaaGTTATTTATCATATAAAACAGACGT ACTTATTACCTCAGGAAAATGACATCTAATAACTCCTCTACGCTCGTTAC CGCCCTCGATACACTCAACACCACCCTTCTACCGCCAACAGCCACCTGTT TTCATATCATGGACGAAGCAAATATGACACCTCATTTTAAAGTCACCTAC ATCACCAGTTTGGCAATCTCCTTCATTTTTATCACCATTGTGAATATCTT CCTCATTATCGGTTTAAAACGGGCCTACGCCAAATTGACATTATCCAAAA AATTGTTCCTGTATCTCTCAGCTAGTGACTTATTGACAGGACTTGTAACG ATACCTTATCAAGGAGTTATGGTAATATATGGTTCTAGTGCATCTTGCTT CCAAGTCCATTTGCAATCTTTTACCAATACCTTTACTCCTGGGTTATCAA TGTTTATCATTCTAACAATCTCCATTGCAAGATATATCTCCGTCATCAAA CCTACATTTTTCAAGAGTCATGCTAACAGCTCATGGGTATCTGTTTACAT GTTTGGTCAAATTGTTCTGGCAGGTGCAGGATCTATTTGGTATTCAACCG CTACTACGAGTATACATTTAGGGTCTTACTTGATTTTTGTGACAGCCTTG TGTATTTTCATCATTGGAGGATCTATTGTTCTCAATGTGTTCTTGTATCT TAAACTACGGTCATCGCACAGTTCCACAAAAAAGGATTACCAAAAAGAAG TCATTAAAACTTTGATTATTATCTCCGTCATATTATCTATCTGTTTTCTC CCTAATGGTGTCGTATTTGCGTTGGTCGGCTATTACATTATAGCGGACAC TGATAATATGGAGTTATACACAAAATTGATACCCTGGGTTTACGTACCGA TCTTATTAAATGCTGGCTTGAACTCTTGTGTTTATATTTGGCGTGATAAG AAAATCAATCGTTATTTAAGGAGATCGATCCGAAATGAGCAACGACGGTT GAGTAGTAAATGGAGTATTATATCAAGTCCAAAAACCATCACCAACAAGA GATTGGATGCGGTTTTGAGTGATCACACACATCGCAATTCGTCTTATGAA TCGTACGACATCtctgaaatttagaaaattgcAAGCGAATGCTCATCAGA TGAActttgaagaaaagaaagttGTGTGCAGAATTATTTCTCTGAAGATG ACCTCTTGTAGTGAGTTTCGAATATATGTAGTTTTTaaacaacatcaaaa acatgaagcTTCTGGTTATTCTTTTTATCATGGAATTATTTCAGTTTTGT ATTTCGTTGCACATTGAAACAATAAGTCCAAGTATAATACTGTCTTTCTT TTATGTGGAGCAGAGAACCATAACATAATTTTGTGCTTAAAACTTACACT TGGACATTTTGAGATGATATTATGTAGACAATGGATGCGCTAAATTACAT TTGCTGTTACGCTCATTTTTGGGAGAAATATTAAGGGCAAAGTCTTCAAG AACATTGAAGATAATCTATATAACACAAAACTAACCAAAAAGTCTTAACA TGTCAGGTTCCAAGACAAATTTTCAGTTACTTAGAAAACCGTATTCTCTG ATTTTCCTTGgtcaaaactttttattatgAGACATTATTGGGTTCTGAGA TGAAAGTTCAACATGATGAATGAAAAAAGTCGATAAAacttatttttgta aatagacAAATTTCCTATCAGCAGATTCatataaaaaagtcacgaaaaga catgcaaagattaccttatactctggacattttgaaaaaatatgtgcaat attcagccaatcagagctttactcgacgttttttcgtaacttttttacat gaatctgctaataggaaacgCCCCCGGCGTTTAttagatttttagatttt aagaaggggtgtttattcgaggggcgtttaaaagGAGTGGGCGTatattc gaagtaatacagtATTAAGTACTAGACTTTATGAAACAGTATTATCAGTt gtaaaattcaattttgatttcGATTTTAATTCCtctaagaaaaaataaaa taaagggGCGCCTTCTTTAACTGGAAAATGTTAATAATCTGcagtttcat tttcaatttatcCTTCTATCTAATGAACTACAGTAGGCACATAATTCCCC ATAAGAAAAGGACATTAAAGCTAAATTATTAATCAAAGTAAGTAAAATCG TTTATCTTGATATCTGGAATATTTAAATCCTCACTGtgttattacacgtt ttttaataagaacaaactatacgtaaggcttcgatggcaaaaatgttaag aacaagttaagaacattttaaagctttgcggactctaaaacaccaaattt cttgttaaaatggatgaaaaatgctaaaaatatagtgaaaataagaacat gttaagaacatttttagggcttagatataaaaaagttaagaacatccgaa ggcttcaaaaattttggattttcttataaaaaacgtgtataaaggtTGAT TTATCTTTGCTTTTCCGTTCGCCTTCTTaaaactttatttaaaaagCCTA TAGGGTTAACAATATGTTCAAGAAATAACTTTTTTCGAGTTTTAATTATT AGGAGTGATAAGAtctttatcaatatttttttataaattttcctCCGTCG TATACGTTACAGGGGGTGGGTTGGTCATTTGAATTTTACTAGTAAAGGAT TGATTTTactcaatattttgaaagttttgttaaCAATGCTATCTTTAATG GGTAgccttttatttatttttgcgaGTAGTGCAACTTATAAATTTTAGCG GGGATTGGACCCCTGGACAAAACCCTATTTTACTTTTATTCTATAATTAG GCTTTATGACACAAGTCACACCCGTACTGTTTATCGTGGGGGCGTATGGA ATTGAAAGTATGACGGTATTTGACCTTTCTTATTCCGACGTTTCGGTGAT TGAAGAAAGAGCTGACGGCGTTTAGGAGCCTTGCTATGAAAAAGTGAGca ttttagtaatttttgctttaaatttctgcgttgaCGTTATTTTCCCACCA CTTTTGTCAATTTAAGATTCGACGTAAAAATTTTTCACCAAGGCAAAGGG CAAAAACTTAGATTTTCTAATTCCATATAGTAGTAGTTACCGTTTACAAT TGATGTTTTCATAAATTGAAACCAGTAAGATACAGACGGCTTTTGAGATA AGAAACAAgcgaaaaggaaaaaaatatatagaagATGAAGGGACCTATTT CTTCATTAGAAGAAAAAGGCTTAAAGTGGTCTTTTCATGAAGCATAAAGG AACTAGACCATCTTAGCTTCTTTGCGgaggaaaaaaaatcgaataaaaaa tattttcattgaaGATTTCTCTATGTCATAGTCTATGAGTAAGAACTTCT AACCTACAAAAGAAGCTTCATCGATAATTTTTATgttgtcattacttttt tttgattatttGGTCATTGTCGGGACAGATTCGTCATTTCTTGGTTCCAA AATGATTCGATTGAAAATCTTATCATGTCTTGACCTCCtaatttgacttt tttaatgCCAAAAGATTAATACAGCGGGGTCTCCATAGCTCGAACACTCA CGGGGAATGCAGATTTGTTCCAGTAATGGAAAATTTGAGTTAtcgagtaa ggtttataaggcattgttgacTGAAGGGACCAGCAAACCTGGTAGAGTTA AGTTGACATTCAAGTTACAGAGGTTTGAGTTAAATAGTCTCCATTacatg aattaaaaaaacttataTTGGTGCTCCTAACCTCCTTTCTTGATCAGTTA TAAAGATTTTACAATCTATCCGGAACCTATAAGGAATGAGAATGTAGTTA AAATGTTGAtactaaaaaatcaaattctagGGGAACCTAGTTTGCTTCAT TTATTCTTCAAATCTCATTATtatctttcagaaaaacaacCACCAAAGGT GCAGAATGTCAATGAACAATGTCACTATTTCTACAGCCGCCCTCGATACA CCCAACACCACCCTTCTACCGCAAACAGCCACCTGTTTTCATATCATGGA CGAAGCAAATATGACACCTCATTTTAAAGTCACCTACATCACCATTTTGG CAATCTCCTTCATTTTCATCACCGTTGTGAATACCTTCCTCGTCATTGGT TTAAAACGGGCTTACACAAACCTAACGTTATCCAAAAAATTGTTCCTATA TCTCTCAGCTAGTGATTTGGTAACAGGAATCGTGACAATACCTTATCAAG GAGTTATGGTAATATATGGTTCCAGTGCTTCCTGCTTCCAAGTCCAGCTG CAATCTTTTACCAATACCTTTTCTCCTGGTCTATCAATGTTTACAATTCT AACAATCTCGATAGCCAGATATATCTCCGTTATCAAACCAACCTTTTTCA AGAGTCATGCTAACAGCTCATGGGTATCTGTTTATATGTTTGGGCAAATT GTTTTAGCAGCCTCAGCGGCTGTTTGGTATGCCACAGCTACTACCAGGGT ACATTTAGGATCTTATCTGGTTTTCGTGACAGGTGTATGCTTTGTTGTTA TCGGAGGAGCTATTattcttaacgtgttcttatttaTCAAACTACGTTCA TCTCACGATTCCACAAAAAAGGATTACCAAAAAGAAGTCATCAAAACTTT GATTATTATCTCCGTCATATTATTCATCTGTTTTCTCCCTAATGGTGTCG TGTTTGCGTTGGTCGGTTATTACATAATGGCGGATATTGATAATATGGAG TTATACACAAAATTGATACCCTGGGTTTACGTACCGATTTTGTTAAATGC TGGTTTGAACTCTTGTGTTTATATCTGGCGTGATAAGAAAATTAATCGTT ATTTGAGGAAGTCAATTCATAATGAGCAGCGACGGTTGAGTAATAAATTC AATCCTCTTTCCAGTCCTCTGCCAATCACCAATAAGAGACTGGAAGCGAT TTTGAGTGACCACGCTAACCGTGATTCGTCTTATGAATCATACGAACATT CTGAAGTTTgagtagtctagcaagctagacgactaattcatacatagtag aaataaagcaaaaagtaataaagggagaaattttagtcgtctagaaacct ttgtgcactaacaccaaacaaaagaaaagtgtcaatattGCAATTATAAT TTTTTCCTGCTCAAAATAATTCTTGAGAAAAAAAATATGAGTGGATTTGT GTATTGAAAGTTTTTCATTTGAGTTGATTTCGTTTTGAGAGTTTGTTGTT GCTTGATAAATTGTTTTCTCGCAACGCAAGTTTCTGCGTAGCTAGCCCCT GTATCTATAAGGCTGGAACACCGGAttcttccagtcgtttatacaaacta aatcccgtattattattattattagtattggtattattagtattacacgc attataaacgactccagtctaaagtTTGAGTCAAATTGATGTGAAGGATG GGACTATgtacatttatttatttatttaaattgAACCACTCCACGTCCGT GGGCAAACTACAAATGTTTTACAAAACTAAACTTGTAAAATACCTAGTTT GTAAATTCCCATTTCCGTAAGTTATCCATCCCGCTTCAAATTGGATAGtc gcaaaaaaagaaatttttcaaacatacagtactttaagggaag

Coding sequence (CDS) from alignment at sc0000021:135866..143258+

>TCONS_00002598 ID=TCONS_00002598|Name=TCONS_00002598|organism=Clytia hemisphaerica|type=CDS|length=1056bp|location=Sequence derived from alignment at sc0000021:135866..143258+ (Clytia hemisphaerica)
ATGTCAATGAACAATGTCACTATTTCTACAGCCGCCCTCGATACACCCAA
CACCACCCTTCTACCGCAAACAGCCACCTGTTTTCATATCATGGACGAAG
CAAATATGACACCTCATTTTAAAGTCACCTACATCACCATTTTGGCAATC
TCCTTCATTTTCATCACCGTTGTGAATACCTTCCTCGTCATTGGTTTAAA
ACGGGCTTACACAAACCTAACGTTATCCAAAAAATTGTTCCTATATCTCT
CAGCTAGTGATTTGGTAACAGGAATCGTGACAATACCTTATCAAGGAGTT
ATGGTAATATATGGTTCCAGTGCTTCCTGCTTCCAAGTCCAGCTGCAATC
TTTTACCAATACCTTTTCTCCTGGTCTATCAATGTTTACAATTCTAACAA
TCTCGATAGCCAGATATATCTCCGTTATCAAACCAACCTTTTTCAAGAGT
CATGCTAACAGCTCATGGGTATCTGTTTATATGTTTGGGCAAATTGTTTT
AGCAGCCTCAGCGGCTGTTTGGTATGCCACAGCTACTACCAGGGTACATT
TAGGATCTTATCTGGTTTTCGTGACAGGTGTATGCTTTGTTGTTATCGGA
GGAGCTATTattcttaacgtgttcttatttaTCAAACTACGTTCATCTCA
CGATTCCACAAAAAAGGATTACCAAAAAGAAGTCATCAAAACTTTGATTA
TTATCTCCGTCATATTATTCATCTGTTTTCTCCCTAATGGTGTCGTGTTT
GCGTTGGTCGGTTATTACATAATGGCGGATATTGATAATATGGAGTTATA
CACAAAATTGATACCCTGGGTTTACGTACCGATTTTGTTAAATGCTGGTT
TGAACTCTTGTGTTTATATCTGGCGTGATAAGAAAATTAATCGTTATTTG
AGGAAGTCAATTCATAATGAGCAGCGACGGTTGAGTAATAAATTCAATCC
TCTTTCCAGTCCTCTGCCAATCACCAATAAGAGACTGGAAGCGATTTTGA
GTGACCACGCTAACCGTGATTCGTCTTATGAATCATACGAACATTCTGAA
GTTTga
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001413XLOC_001413Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00002598-exon-sc0000021-1491911889:135866..135887TCONS_00002598-exon-sc0000021-1491911889:135866..135887Clytia hemisphaericaexon
TCONS_00002598-exon-sc0000021-1510915933:135866..135887TCONS_00002598-exon-sc0000021-1510915933:135866..135887Clytia hemisphaericaexon
TCONS_00002598-exon-sc0000021-1575043694:135866..135887TCONS_00002598-exon-sc0000021-1575043694:135866..135887Clytia hemisphaericaexon
TCONS_00002598-exon-sc0000021-1491911889:136531..136578TCONS_00002598-exon-sc0000021-1491911889:136531..136578Clytia hemisphaericaexon
TCONS_00002598-exon-sc0000021-1510915933:136531..136578TCONS_00002598-exon-sc0000021-1510915933:136531..136578Clytia hemisphaericaexon
TCONS_00002598-exon-sc0000021-1575043694:136531..136578TCONS_00002598-exon-sc0000021-1575043694:136531..136578Clytia hemisphaericaexon
TCONS_00002598-exon-sc0000021-1491911889:136879..136956TCONS_00002598-exon-sc0000021-1491911889:136879..136956Clytia hemisphaericaexon
TCONS_00002598-exon-sc0000021-1510915933:136879..136956TCONS_00002598-exon-sc0000021-1510915933:136879..136956Clytia hemisphaericaexon
TCONS_00002598-exon-sc0000021-1575043694:136879..136956TCONS_00002598-exon-sc0000021-1575043694:136879..136956Clytia hemisphaericaexon
TCONS_00002598-exon-sc0000021-1491911889:141547..143258TCONS_00002598-exon-sc0000021-1491911889:141547..143258Clytia hemisphaericaexon
TCONS_00002598-exon-sc0000021-1510915933:141547..143258TCONS_00002598-exon-sc0000021-1510915933:141547..143258Clytia hemisphaericaexon
TCONS_00002598-exon-sc0000021-1575043694:141547..143258TCONS_00002598-exon-sc0000021-1575043694:141547..143258Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00002598-proteinTCONS_00002598-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000021supercontigsc0000021:135866..143258 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.68355e-07 1.83089e-07 1.38616e-07 8.45269e-07 8.70505e-07 3.82233e-07 1.48086e-06 4.45743e-07 1.44168 1.36519e-06 1.33581e-06 0.416035 1.53098 1.06759 0.498479 0.574688 0.879403 0.986614 0.965596 2.94116e-07 0.948235 5.84192e-07 5.80113e-08 2.62361e-08 2.32871e-07 3.03813e-07 9.59035e-08 0.903429 1.78698e-07 1.09155e-06
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000276GPCR_Rhodpsn
IPR017452GPCR_Rhodpsn_7TM
Vocabulary: Biological Process
TermDefinition
GO:0007186G-protein coupled receptor signaling pathway
Vocabulary: Molecular Function
TermDefinition
GO:0004930G-protein coupled receptor activity
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007186 G-protein coupled receptor signaling pathway
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004930 G-protein coupled receptor activity
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00002598 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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