TCONS_00002512 (transcript) - C. hemisphaerica

Overview
NameTCONS_00002512
Unique NameTCONS_00002512
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2182

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00002512 ID=TCONS_00002512|Name=TCONS_00002512|organism=Clytia hemisphaerica|type=transcript|length=2182bp
tttattttgaacgtTGAGACGACTGGTCACGAAGATCATGGCATTAAAAC
GACAAGAGAAGCTACGAAACGATTTAACATTTGCACACACACAAATATCG
acacaacaacaaaacaacaagATGTTTGCGGGATCAGATCTCTCCAATAA
CGTTGTTCCTGACCCAACTGCATACGCACAGGAAGCACTATCAATGGGCA
GTATGGATGAACAAAGTCTTTTCGATTCTTACGAAAACCAAAAAGTTCCT
TCGGGAAAGCCACCAAAGCTAACAGACAGTGACCCATGGTCTAAGAAGCG
TTCAATCGAAAGcgattttgatgattttcataTACCACCAAAACGAGCTA
ATATGtttgaaaatgaaactaaaCCTGAAATTCAACCTGAAGATGACAAG
CGTGTTATCGTACCTGCCGACCCCATGTGCTGGACCAACGAGCACGTCCG
ACAATGGGTCCAGTGGGCCATTAAAGAATTCAGCTTAAAAGATGTTGACG
TTAACACCTTTACAATGACGGGACAAGAATTATGTAAACTAACACGTGAA
GAATTCTTACGTCTAGCTCCCGCATACAACGGCGATATATTGATGGCGCA
TTTATGCGTCTTACGCAAAGCACCTTTACCAAATCTCACAACTGAAGATA
TCGATAAAGCCCTGGCCCCACCATTGAGTCACAATGCTAATAACGGCGCT
AAAGTGCCAAGTTATCCACGCACAGAAGCTGAAAAACGTCCTGCGTCGCC
ACCCGTCGGTAGTTATTCCCGATCCGTGCCCGTTGCACGTGCCGATGGTT
CGGAGTATTTAACGAGCTGTGCTTACAACCAATCATCTTCGTCTTCATCC
TCATCGACTCCATCTTCATCGACAAACCGAGATTCAGTCGTCCCTTCAAA
ATCATTCGAATCACCCCCAACATCTCACAGTGagTACAACCCGTCATGTC
CCTCACCTAAACCAGCATCTCTCCCACCGACGACATCACACGGCGGAAGC
GGACAAATCCAATTATGGCAATTCTTACTCGAACTCTTATCCGACCCATC
ACACGCGAGTTTCATCGCATGGGAAGGTAACAACGGCGAATTCAAACTTA
CCGACCCCGACGAAGTTGCCCGACGATGGGGTGAACGTAAAAACAAACCC
AACATGAACTACGACAAGTTATCGCGTGCTTTACGATATTATTACGATAA
AAACATCATGACCAAAATTCACGGCAAACGATATGCATATAAATTCGACT
TTCAAGGACTTGCACAATTAAACCAACCAATTACCTCAGACGCCCAATTA
CACGCCGCCCAAGCCGCAGCGGCTGCCTACAGAGGTGAATACCCATTCTA
CTCACCCTATGGACCACCACCCGCCCCAGGATCACCATACGGTTACCCAT
CGTCCTCGTACCCACAATGCTATTCGTCAGTACAGTCGCCTAGCAACCAA
TACGGATATCCATGGGGACGCTCATCATACCCAACAAGTATGTACAGCCG
ACAATCATCGGCACCGTACTTTTAGAATGGATTGATTGACATGTTCTATA
ATCTTTAATAATATATATTTCTATATATTCTTTTGACTGTTCTTTGTAAC
GTACGCGTAACTGCCCTTCAACGTGCTCGTAATTTTGTTGTGTTACGAAA
TTACGAGTTTTTTTagagaatttattttatttatattggTTTTTTACCAA
TGCTTACGTATTTTTCCTCTTAATTTTCCAGCGCAGTTTCTATCTGTTAT
TATGCCttgagaattttgattttcagtatttgTGACAAAGGACCTCgaaa
tttcgaaagttttttttgcgACCAAGTCGAAAACTTTGATATTTTACGAG
ATAATCTAAAATTTTACAGTTTCTTTCTGGTTTTGCGGTCCACATCAATT
ATAGcatttattatattattatatattgttattattattgtttGACGCGA
CTTTTTGTTTCAAGGTAAAAAGTCGATGGaccaaaaaagctaaaaattct
ATTGGTGTATGAaaggtttatatttttattcttttatcctAAGTATTAAG
AAGATGCATGTGTTTTTTGGAGATGTTTAATAAAAAACGAAAGATTTATT
ATTTGTGACTTATAATTGATATTATtacatataaaaaaaacatttaaaaa
ataaataaaagttgaaaactttgtgtaaaatt
Run BLAST on NCBI

protein sequence of Erg protein

>TCONS_00002512-protein ID=TCONS_00002512-protein|Name=Erg protein|organism=Clytia hemisphaerica|type=polypeptide|length=495bp
MALKRQEKLRNDLTFAHTQISTQQQNNKMFAGSDLSNNVVPDPTAYAQEA
LSMGSMDEQSLFDSYENQKVPSGKPPKLTDSDPWSKKRSIESDFDDFHIP
PKRANMFENETKPEIQPEDDKRVIVPADPMCWTNEHVRQWVQWAIKEFSL
KDVDVNTFTMTGQELCKLTREEFLRLAPAYNGDILMAHLCVLRKAPLPNL
TTEDIDKALAPPLSHNANNGAKVPSYPRTEAEKRPASPPVGSYSRSVPVA
RADGSEYLTSCAYNQSSSSSSSSTPSSSTNRDSVVPSKSFESPPTSHSEY
NPSCPSPKPASLPPTTSHGGSGQIQLWQFLLELLSDPSHASFIAWEGNNG
EFKLTDPDEVARRWGERKNKPNMNYDKLSRALRYYYDKNIMTKIHGKRYA
YKFDFQGLAQLNQPITSDAQLHAAQAAAAAYRGEYPFYSPYGPPPAPGSP
YGYPSSSYPQCYSSVQSPSNQYGYPWGRSSYPTSMYSRQSSAPYF
Run BLAST on NCBI

transcript from alignment at sc0000020:543191..550725-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00002512 ID=TCONS_00002512|Name=TCONS_00002512|organism=Clytia hemisphaerica|type=transcript|length=7535bp|location=Sequence derived from alignment at sc0000020:543191..550725- (Clytia hemisphaerica)
TTTATTTTGAACGTTGAGACGACTGGTCACGAAGATCATGGCATTAAGTA
AGTATTGATTTAAAAATTTTCATTTGAAAAATCTTATTAGCAATTTCTAA
ATCAATCAATATAATAATGTATAAGGATTAGAAGAATCCTGGAAAATATT
TGAATTTGAAAATTTAAATTGCTAATAACTCCTGGAATATTTATCAAAAT
GAACTGAAATTTGGTACGAAGGTAGTGTTTATAAATATATTTTATTTCCA
AAAAAAAAACTTTCCAAAAAATTGATGACGTCAGCATTTTTTCAGGAAAA
ACGAAAATTGCTGATATTTGCTGACGTCATCAATTTTTGATTTTGTTTTT
TGGAAATGAAAGACATTTATCCACCCTACCTTCGTACAAAATTTGAGCTC
ATTTCAATAAATATTCCAGGAGATATTAGTATTTCAAATTTTTGCTGACG
TCAGCAAAAGGTGTTTTGCCTTAAATTTCCCCAAATGGCTGAAACAGAAT
TTTTGGTATTAATATGAAGAGTGAAAATAACAAAAAATTTTCCCATAAAA
AGGGGTGGAACAACTGGCCGTCACGGCCGTCACGATTTATCGAATTTTTT
GCACAGGCCTTAACTTGCCTGAGTTCGCTCCCCCGATAACGTTGAGCTTA
GCAAGTAGGAGTACACGAAACAAGGGTGTTCCCGCCAAGGTTATAAAAAA
GGAAAGAAAATTCGTTTTTACTTCTTTCGCATTGCGTGAAGATAAATTCT
TGAACTATATTTGAAACTTTTTCCTACCTCTGCACATCATTGGCAGAAGG
GTGTAAGAATAAACATAAATTTTTTTGCGTAATAAAACAAGGCAGCATGA
AAGCCATCGTGAGCTTAATAAGTAAATCGGCTATTAATAAAATAAGAACG
ATTTAAGTGTCAAAATAAAGGGACCCGAACTCCACCCCCTTTAAAATTAT
GTGACTGTCATTGCAGAAATTAGAGGGTGATTTTCGATGATAGGTTCAGA
GATGTAGAGAGTCAAATGCAGTGGTAGAAAATTTTAGAAAAATCATACTA
TTTAGCTTTAAAACAGACATTAAAATTTTTACATGGACTGAAGGAGAAAA
TTGAGACGTCTAGCGAAGCTTTTAGGCACTTCTTTGCATATAATTTTTTT
TACTAACTGTATGAGTAAAATAGAGGGCAAAGGGAGAGGTCAAAGTAATG
AGAGACTGTTCATTCATTCAAAGCTCTCAGAAACTCTCTTACACGTTTTT
TCATCCCATATAAGAAAATTTTTGAAGCCTTAGGATGTTCTTATTTTTTG
AGTTTCAAGTCTAGAAAATTTCTAAGCATGTTCTCATTTTCATGTTTTGA
GTATTTTTGTCAATTTTCCTTAAGAAATCAGGTCTGCAAAGCCTTAAAAT
GTTCGTAACTTGTTCTTAATATTTTGACCACAGAAGCCTTATGGTCTTAT
ATAGTTTGTTCTTAAAAAAAACAAGTATGACAGGTCAGTATACAACTCAC
ATGTCAACTTAAAACAAAAAAAGTAGAAACGCATTATTTTATAAGGATTT
AAAGTCAATGGGGAAAAAGTAAGTAACTTTACTTTTTAAAAGATTGTTTT
GACAAGAAAATGTCCATTAAAAAAGTGACATGTTCCCATTAACCAAGACC
TCTCAGCTTTTTGTATCAGGTTGACAATTTTTTCTAATTACTGTACGAAA
AAAGAGATTTTTCGTTAAAAGTGCTATTAAGGAGAACTAAAATCAAGATA
CAGTATTTTAGTTTCTTCACTGCCAAAATGAAAAATGTGAGGGAAGCAAA
AACGACCCTAAGGGTTTTTATGCAAGAAAAGGGTCAGTGATTCTGACAAA
TGCTGGCCATGCATTGAATGACAGTTTAGAATTTACGTAAGCGACGCGAA
AATTAATAATGCATCATATAGAAAATGAAAAAGAACGCTCTCACTTCTAG
CATTAGTATGTGATATTTTAGTCATCCCCACCTGAAGACAATTTATAAAA
CAAATCAAATGCGAATTCATATAAAACGTATCAAATATGTGAAAATTTTG
TGAAATTTCATCATTCCAAAGATGCGGTAGTTTGTTGAAGGTATCAGCGC
ACAGGGAATTATACCGATATCGAAAAAACTATTATTTATTATATAAAAAT
ATTTTAATTATTTTCGCGGCGGCAAAAATGAACGAAATTGCAAAAGTCGC
AGCTACATCAATGATAGATATTGCAAATCAAGGTAATTATTGAATAGAGA
CTTGTCAAAGTGTTGTAATTATTTTAAAGTGATATGAGATTTCTATTTGT
ATTGTATTATAGGTTACCGTGTTACTAAGAATAAAGGATAAATCAAAAAG
CGTCAAATGTAATCAAGCGACGGAGTTTTTTGACGATAACGTTTGTTTAT
TTGACGGCATTTATAAACAAAACAGATCAACTTGTCAAGGTTTCTCTGCT
CTCTTACTCTATTGACGTACTTATTCAGTTTCCATTCATAATCCAAAATT
ACTCATAACAATAGATAAACAGAAAAAAAACAACATCAAAAAATAACAAA
AACAAATCTTTCTTTGTTTCTCTTTTTTGAGTAGAGAGAGAGAAGAGAAT
CACGATCATTTGTCACGAATTTTAGTTTGTTATGATTGGTTTATTTTTAG
CTTTAACTTCAATTTGATTGGTTGAGAGAGAATGAATGGCCATGATTGGT
CGAGTGGTTTGTTTTGACGTTTAATTGTCTTTTACGCCTTTTGAATGGAC
CCCTCTTTTGTTCTAAATGATAAAGAAAGCTTTTTAAATAATTGTTAGAC
CGATTTGTATAGAGCGAGTAAGAGAGAGAAAAAAAAGCTATATAGTTGGA
GTTTTTAATTGAGCTCTATTATAAAGAGTTTACTCGAGAAGAAAAAAAAT
TAATCAGTCTTTTAGGAAAAAGGCCGTATATAACTGAAGGGAATTTTAGA
GAGAGTGCATTAGTTGAACAGGACACTTTCATGAGGTAACATCTCAATTT
AAAATATTTTTTTTTTTGGAATTTTTTTTCTTAATCTTTTTTATATAGGA
TATTCTTATAAAAAGATGACCTTAAATTTTTTATAAGATGATGATTTTTT
TCTCATTTTTTCAATCCCTTGTGCAAACTGTTTTGGGACAAGGGCTTGAT
AGAACATCACAGGGGGACCTGAAAGGGGAGGAGATGTCCATGCAGTGTTT
TTGACATTCAGGGAAAAAACAAAAAGATTGAAGATGAAAAAGGTCACTTA
AAAATTAATGATTTTTCTACACTTTTGAAGCTATAATAAGCTATTTTCTA
ACTTTTTACGGTGATAAAAATTTGATGGACCATTCATTTGCATTTGGGAA
AGTGATTTTTAATGATTGACAAAAAAATGGGACAATTTGCTTTTTTTTCT
TAATTTTCAACTTCATTATTCTTAATTTACTTTTCTTTTTGATGGTACCT
GCCAATTTAATTACTCTTGATAATTATTGGTACTGCTAACAAAGAGAGAA
GACAAAAAGCGGAGAATAGGTGGTAGAACAATAGAATTGTAATTAAGAAG
ACTCGATCGGAAATCAAATGACCAATTTAAATTTATGATCAATAGCATCC
GTTAAAAATATTTTCCTTTCTTTTCAATACTATTGTTCTACTTTCATCCG
CTCATAAACGACTCTTTATTCTTCTCCTAATTAATAAAAGTCGATGAAGA
GAATTAATTTAGTTACATTTCAAGCATTGTCGTCTAAGCATCAAGGTCTA
AAAAGCAAACATCAATTCAAACAACACATTAATTATAGACTGAATATTTA
TCTTATCTATAAATGATAAATTTCAGTATTATTTTTAATTGATCGTGTTC
ATGTATTGATAGCTATACCTTATACTTAGTACATTCGAAGTGATTACTGT
ATTTGGTTTTATATTGGTGTGGTTGTATAATTGGTTTCAATATTTTATCA
ACTCAATAGAACGACAAGAGAAGCTACGAAACGATTTAACATTTGCACAC
ACACAAATATCGACACAACAACAAAACAACAAGATGTTTGCGGGATCAGA
TCTCTCCAATAACGTTGTTCCTGACCCAACTGCATACGCACAGGTAAGGA
TAGAGAATTCTTAGTAATTAGCTATCTATTTTAGAAAATAATAGGATATT
TTTAATTGACTTGAAAATGTTTTTTCTACAGTAGGGTATCGATTTTAATA
TGTTGTTTTGATCAGTGAGACGCATGATCAATGAGACAAAAAACGTCTTT
TTTATTAAATTTTTCTATTCACTTTTAAACTCAATTACTGTTAGCTGGGA
GTCTATCACGGGACGAAAAAATAAGGAAATTAAATCAACGCCTACTATAG
AAGTTGAAAATGTTTTCAAAAATTCTCCCGTTTGCTTTTTTTATAATTTT
GGCAGTTTCGGACATATCACGAAAAATAACCTCTCGAAAGTCATGCTTCA
ACTTGTAATAACCCAATTCAAAATATGATTACGTAAAGCACTTATTATGT
TGAAATTGTTTTGTTTATTATATTATTCATGAATCGTTCAACAAAATAAT
AAAAATTGAATAGAAAGAATAAAAGAAAATGATAGAGAAAAAAAAATTTT
CGAAAAGATAATTACTGTATTGAAACTATTATTAATTTTCTCTTTAGTAT
TTTTGCGAAATAGTTAATGACGCTTGAAATCAAGAGGTTCTTTAATTTTG
AAATCAATTATATAGTGCATTAGGAGATCGAAAGACCGAAATTTTGTGCA
AAATAACAAAATTGTTTAAATAATTTTCATTTCTCTTTTGTAGGAAGCAC
TATCAATGGGCAGTATGGATGAACAAAGTCTTTTCGATTCTTACGAAAAC
CAAAAAGTTCCTTCGGGAAAGCCACCAAAGCTAACAGACAGTGACCCATG
GTCTAAGAAGCGTTCAATCGAAAGCGATTTTGATGATTTTCATATACCAC
CAAAACGAGCTAATATGTTTGAAAATGAAACTAAACCTGAAATTCAACCT
GAAGATGACAAGCGTGTTATCGTACCTGCCGACCCCATGTGCTGGACCAA
CGAGCACGTCCGACAATGGGTCCAGTGGGCCATTAAAGAATTCAGCTTAA
AAGATGTTGACGTTAACACCTTTACAATGACGGGACAAGAATTATGTAAA
CTAACACGTGAAGAATTCTTACGTCTAGCTCCCGCATACAACGGCGATAT
ATTGATGGCGCATTTATGCGTCTTACGCAAAGGTATTGATGTGTTCATTT
TGTGTTTTTCTCATTTTTAAAATTGCCACTTTTTTTCATTGTCAAGTGCT
TTTTATTTGAATGGGTTTTTTTCAGTTGATTGTTTTTTTAAAGAGAGTCG
TTAGTGGTCTTCAAGTTAATTACAAATCATTATAAGAAAATAGCTTCAAA
GCACAAAATAACATTTTGAATGATAGAGAGCGGTCACATCAAATAAATGG
TATTTAAAAACGGTCGAAAGTCTGATTTAATTGTCTATGTGGCGATGACA
TAAATTTATCTTGTTAAAAAATAAGTGTTGCACAAATAAATAATATTATT
TTTTTTGTATCATTTCATTTATAGCACCTTTACCAAATCTCACAACTGAA
GATATCGATAAAGCCCTGGCCCCACCATTGAGTCACAATGCTAATAACGG
CGCTAAAGTGCCAAGTTATCCACGCACAGAAGCTGAAAAACGTCCTGCGT
CGCCACCCGTCGGTAGTTATTCCCGATCCGTGCCCGTTGCACGTGCCGAT
GGTTCGGAGTATTTAACGAGCTGTGCTTACAACCAATCATCTTCGTCTTC
ATCCTCATCGACTCCATCTTCATCGACAAACCGAGATTCAGTCGTCCCTT
CAAAATCATTCGAATCACCCCCAACATCTCACAGTGGTAAGGACATTTTC
CTCCATACTATAATTTTGTATAAGGTGGCGTTGATTTTTCCTTGAGGCTA
AATTCTCACGTAGTTCTATTTTTTTTTTGCCTAATACTTCAAGCTTCAAG
TACTCATACTTCTAAAAAACTTCTGACTGTTTCTTAATGTTGACGTCAGC
AAAAAAAATCTTGAAAAATTTGTTATGATAACACAAGTATCTAATTGCCC
GCCTTCTATTTTGTCATTTAAAAAATTTCAACAAAAAAAATGTTTTCCTT
ACTGAAGCTTCTTAAGTCCAACTAAGAATGATAACAAGCAAACTTAAGTG
TGGAAATCTACTCTTAAAACTCATAACACATCACATCAAAAATTACAAAA
ATTTATAACAGAATTTCTCTTTTTTTTTTCAACAGAGTACAACCCGTCAT
GTCCCTCACCTAAACCAGCATCTCTCCCACCGACGACATCACACGGCGGA
AGCGGACAAATCCAATTATGGCAATTCTTACTCGAACTCTTATCCGACCC
ATCACACGCGAGTTTCATCGCATGGGAAGGTAACAACGGCGAATTCAAAC
TTACCGACCCCGACGAAGTTGCCCGACGATGGGGTGAACGTAAAAACAAA
CCCAACATGAACTACGACAAGTTATCGCGTGCTTTACGATATTATTACGA
TAAAAACATCATGACCAAAATTCACGGCAAACGATATGCATATAAATTCG
ACTTTCAAGGACTTGCACAATTAAACCAACCAATTACCTCAGACGCCCAA
TTACACGCCGCCCAAGCCGCAGCGGCTGCCTACAGAGGTGAATACCCATT
CTACTCACCCTATGGACCACCACCCGCCCCAGGATCACCATACGGTTACC
CATCGTCCTCGTACCCACAATGCTATTCGTCAGTACAGTCGCCTAGCAAC
CAATACGGATATCCATGGGGACGCTCATCATACCCAACAAGTATGTACAG
CCGACAATCATCGGCACCGTACTTTTAGAATGGATTGATTGACATGTTCT
ATAATCTTTAATAATATATATTTCTATATATTCTTTTGACTGTTCTTTGT
AACGTACGCGTAACTGCCCTTCAACGTGCTCGTAATTTTGTTGTGTTACG
AAATTACGAGTTTTTTTAGAGAATTTATTTTATTTATATTGGTTTTTTAC
CAATGCTTACGTATTTTTCCTCTTAATTTTCCAGCGCAGTTTCTATCTGT
TATTATGCCTTGAGAATTTTGATTTTCAGTATTTGTGACAAAGGACCTCG
AAATTTCGAAAGTTTTTTTTGCGACCAAGTCGAAAACTTTGATATTTTAC
GAGATAATCTAAAATTTTACAGTTTCTTTCTGGTTTTGCGGTCCACATCA
ATTATAGCATTTATTATATTATTATATATTGTTATTATTATTGTTTGACG
CGACTTTTTGTTTCAAGGTAAAAAGTCGATGGACCAAAAAAGCTAAAAAT
TCTATTGGTGTATGAAAGGTTTATATTTTTATTCTTTTATCCTAAGTATT
AAGAAGATGCATGTGTTTTTTGGAGATGTTTAATAAAAAACGAAAGATTT
ATTATTTGTGACTTATAATTGATATTATTACATATAAAAAAAACATTTAA
AAAATAAATAAAAGTTGAAAACTTTGTGTAAAATT

Coding sequence (CDS) from alignment at sc0000020:543191..550725-

>TCONS_00002512 ID=TCONS_00002512|Name=TCONS_00002512|organism=Clytia hemisphaerica|type=CDS|length=7440bp|location=Sequence derived from alignment at sc0000020:543191..550725- (Clytia hemisphaerica)
AGTACAACCCGTCATGTCCCTCACCTAAACCAGCATCTCTCCCACCGACG
ACATCACACGGCGGAAGCGGACAAATCCAATTATGGCAATTCTTACTCGA
ACTCTTATCCGACCCATCACACGCGAGTTTCATCGCATGGGAAGGTAACA
ACGGCGAATTCAAACTTACCGACCCCGACGAAGTTGCCCGACGATGGGGT
GAACGTAAAAACAAACCCAACATGAACTACGACAAGTTATCGCGTGCTTT
ACGATATTATTACGATAAAAACATCATGACCAAAATTCACGGCAAACGAT
ATGCATATAAATTCGACTTTCAAGGACTTGCACAATTAAACCAACCAATT
ACCTCAGACGCCCAATTACACGCCGCCCAAGCCGCAGCGGCTGCCTACAG
AGGTGAATACCCATTCTACTCACCCTATGGACCACCACCCGCCCCAGGAT
CACCATACGGTTACCCATCGTCCTCGTACCCACAATGCTATTCGTCAGTA
CAGTCGCCTAGCAACCAATACGGATATCCATGGGGACGCTCATCATACCC
AACAAGTATGTACAGCCGACAATCATCGGCACCGTACTTTTAGCACCTTT
ACCAAATCTCACAACTGAAGATATCGATAAAGCCCTGGCCCCACCATTGA
GTCACAATGCTAATAACGGCGCTAAAGTGCCAAGTTATCCACGCACAGAA
GCTGAAAAACGTCCTGCGTCGCCACCCGTCGGTAGTTATTCCCGATCCGT
GCCCGTTGCACGTGCCGATGGTTCGGAGTATTTAACGAGCTGTGCTTACA
ACCAATCATCTTCGTCTTCATCCTCATCGACTCCATCTTCATCGACAAAC
CGAGATTCAGTCGTCCCTTCAAAATCATTCGAATCACCCCCAACATCTCA
CAGTGGAAGCACTATCAATGGGCAGTATGGATGAACAAAGTCTTTTCGAT
TCTTACGAAAACCAAAAAGTTCCTTCGGGAAAGCCACCAAAGCTAACAGA
CAGTGACCCATGGTCTAAGAAGCGTTCAATCGAAAGCGATTTTGATGATT
TTCATATACCACCAAAACGAGCTAATATGTTTGAAAATGAAACTAAACCT
GAAATTCAACCTGAAGATGACAAGCGTGTTATCGTACCTGCCGACCCCAT
GTGCTGGACCAACGAGCACGTCCGACAATGGGTCCAGTGGGCCATTAAAG
AATTCAGCTTAAAAGATGTTGACGTTAACACCTTTACAATGACGGGACAA
GAATTATGTAAACTAACACGTGAAGAATTCTTACGTCTAGCTCCCGCATA
CAACGGCGATATATTGATGGCGCATTTATGCGTCTTACGCAAAGAACGAC
AAGAGAAGCTACGAAACGATTTAACATTTGCACACACACAAATATCGACA
CAACAACAAAACAACAAGATGTTTGCGGGATCAGATCTCTCCAATAACGT
TGTTCCTGACCCAACTGCATACGCACAGATGGCATTAAAGTACAACCCGT
CATGTCCCTCACCTAAACCAGCATCTCTCCCACCGACGACATCACACGGC
GGAAGCGGACAAATCCAATTATGGCAATTCTTACTCGAACTCTTATCCGA
CCCATCACACGCGAGTTTCATCGCATGGGAAGGTAACAACGGCGAATTCA
AACTTACCGACCCCGACGAAGTTGCCCGACGATGGGGTGAACGTAAAAAC
AAACCCAACATGAACTACGACAAGTTATCGCGTGCTTTACGATATTATTA
CGATAAAAACATCATGACCAAAATTCACGGCAAACGATATGCATATAAAT
TCGACTTTCAAGGACTTGCACAATTAAACCAACCAATTACCTCAGACGCC
CAATTACACGCCGCCCAAGCCGCAGCGGCTGCCTACAGAGGTGAATACCC
ATTCTACTCACCCTATGGACCACCACCCGCCCCAGGATCACCATACGGTT
ACCCATCGTCCTCGTACCCACAATGCTATTCGTCAGTACAGTCGCCTAGC
AACCAATACGGATATCCATGGGGACGCTCATCATACCCAACAAGTATGTA
CAGCCGACAATCATCGGCACCGTACTTTTAGCACCTTTACCAAATCTCAC
AACTGAAGATATCGATAAAGCCCTGGCCCCACCATTGAGTCACAATGCTA
ATAACGGCGCTAAAGTGCCAAGTTATCCACGCACAGAAGCTGAAAAACGT
CCTGCGTCGCCACCCGTCGGTAGTTATTCCCGATCCGTGCCCGTTGCACG
TGCCGATGGTTCGGAGTATTTAACGAGCTGTGCTTACAACCAATCATCTT
CGTCTTCATCCTCATCGACTCCATCTTCATCGACAAACCGAGATTCAGTC
GTCCCTTCAAAATCATTCGAATCACCCCCAACATCTCACAGTGGAAGCAC
TATCAATGGGCAGTATGGATGAACAAAGTCTTTTCGATTCTTACGAAAAC
CAAAAAGTTCCTTCGGGAAAGCCACCAAAGCTAACAGACAGTGACCCATG
GTCTAAGAAGCGTTCAATCGAAAGCGATTTTGATGATTTTCATATACCAC
CAAAACGAGCTAATATGTTTGAAAATGAAACTAAACCTGAAATTCAACCT
GAAGATGACAAGCGTGTTATCGTACCTGCCGACCCCATGTGCTGGACCAA
CGAGCACGTCCGACAATGGGTCCAGTGGGCCATTAAAGAATTCAGCTTAA
AAGATGTTGACGTTAACACCTTTACAATGACGGGACAAGAATTATGTAAA
CTAACACGTGAAGAATTCTTACGTCTAGCTCCCGCATACAACGGCGATAT
ATTGATGGCGCATTTATGCGTCTTACGCAAAGAACGACAAGAGAAGCTAC
GAAACGATTTAACATTTGCACACACACAAATATCGACACAACAACAAAAC
AACAAGATGTTTGCGGGATCAGATCTCTCCAATAACGTTGTTCCTGACCC
AACTGCATACGCACAGATGGCATTAAAGTACAACCCGTCATGTCCCTCAC
CTAAACCAGCATCTCTCCCACCGACGACATCACACGGCGGAAGCGGACAA
ATCCAATTATGGCAATTCTTACTCGAACTCTTATCCGACCCATCACACGC
GAGTTTCATCGCATGGGAAGGTAACAACGGCGAATTCAAACTTACCGACC
CCGACGAAGTTGCCCGACGATGGGGTGAACGTAAAAACAAACCCAACATG
AACTACGACAAGTTATCGCGTGCTTTACGATATTATTACGATAAAAACAT
CATGACCAAAATTCACGGCAAACGATATGCATATAAATTCGACTTTCAAG
GACTTGCACAATTAAACCAACCAATTACCTCAGACGCCCAATTACACGCC
GCCCAAGCCGCAGCGGCTGCCTACAGAGGTGAATACCCATTCTACTCACC
CTATGGACCACCACCCGCCCCAGGATCACCATACGGTTACCCATCGTCCT
CGTACCCACAATGCTATTCGTCAGTACAGTCGCCTAGCAACCAATACGGA
TATCCATGGGGACGCTCATCATACCCAACAAGTATGTACAGCCGACAATC
ATCGGCACCGTACTTTTAGCACCTTTACCAAATCTCACAACTGAAGATAT
CGATAAAGCCCTGGCCCCACCATTGAGTCACAATGCTAATAACGGCGCTA
AAGTGCCAAGTTATCCACGCACAGAAGCTGAAAAACGTCCTGCGTCGCCA
CCCGTCGGTAGTTATTCCCGATCCGTGCCCGTTGCACGTGCCGATGGTTC
GGAGTATTTAACGAGCTGTGCTTACAACCAATCATCTTCGTCTTCATCCT
CATCGACTCCATCTTCATCGACAAACCGAGATTCAGTCGTCCCTTCAAAA
TCATTCGAATCACCCCCAACATCTCACAGTGGAAGCACTATCAATGGGCA
GTATGGATGAACAAAGTCTTTTCGATTCTTACGAAAACCAAAAAGTTCCT
TCGGGAAAGCCACCAAAGCTAACAGACAGTGACCCATGGTCTAAGAAGCG
TTCAATCGAAAGCGATTTTGATGATTTTCATATACCACCAAAACGAGCTA
ATATGTTTGAAAATGAAACTAAACCTGAAATTCAACCTGAAGATGACAAG
CGTGTTATCGTACCTGCCGACCCCATGTGCTGGACCAACGAGCACGTCCG
ACAATGGGTCCAGTGGGCCATTAAAGAATTCAGCTTAAAAGATGTTGACG
TTAACACCTTTACAATGACGGGACAAGAATTATGTAAACTAACACGTGAA
GAATTCTTACGTCTAGCTCCCGCATACAACGGCGATATATTGATGGCGCA
TTTATGCGTCTTACGCAAAGAACGACAAGAGAAGCTACGAAACGATTTAA
CATTTGCACACACACAAATATCGACACAACAACAAAACAACAAGATGTTT
GCGGGATCAGATCTCTCCAATAACGTTGTTCCTGACCCAACTGCATACGC
ACAGATGGCATTAAAGTACAACCCGTCATGTCCCTCACCTAAACCAGCAT
CTCTCCCACCGACGACATCACACGGCGGAAGCGGACAAATCCAATTATGG
CAATTCTTACTCGAACTCTTATCCGACCCATCACACGCGAGTTTCATCGC
ATGGGAAGGTAACAACGGCGAATTCAAACTTACCGACCCCGACGAAGTTG
CCCGACGATGGGGTGAACGTAAAAACAAACCCAACATGAACTACGACAAG
TTATCGCGTGCTTTACGATATTATTACGATAAAAACATCATGACCAAAAT
TCACGGCAAACGATATGCATATAAATTCGACTTTCAAGGACTTGCACAAT
TAAACCAACCAATTACCTCAGACGCCCAATTACACGCCGCCCAAGCCGCA
GCGGCTGCCTACAGAGGTGAATACCCATTCTACTCACCCTATGGACCACC
ACCCGCCCCAGGATCACCATACGGTTACCCATCGTCCTCGTACCCACAAT
GCTATTCGTCAGTACAGTCGCCTAGCAACCAATACGGATATCCATGGGGA
CGCTCATCATACCCAACAAGTATGTACAGCCGACAATCATCGGCACCGTA
CTTTTAGCACCTTTACCAAATCTCACAACTGAAGATATCGATAAAGCCCT
GGCCCCACCATTGAGTCACAATGCTAATAACGGCGCTAAAGTGCCAAGTT
ATCCACGCACAGAAGCTGAAAAACGTCCTGCGTCGCCACCCGTCGGTAGT
TATTCCCGATCCGTGCCCGTTGCACGTGCCGATGGTTCGGAGTATTTAAC
GAGCTGTGCTTACAACCAATCATCTTCGTCTTCATCCTCATCGACTCCAT
CTTCATCGACAAACCGAGATTCAGTCGTCCCTTCAAAATCATTCGAATCA
CCCCCAACATCTCACAGTGGAAGCACTATCAATGGGCAGTATGGATGAAC
AAAGTCTTTTCGATTCTTACGAAAACCAAAAAGTTCCTTCGGGAAAGCCA
CCAAAGCTAACAGACAGTGACCCATGGTCTAAGAAGCGTTCAATCGAAAG
CGATTTTGATGATTTTCATATACCACCAAAACGAGCTAATATGTTTGAAA
ATGAAACTAAACCTGAAATTCAACCTGAAGATGACAAGCGTGTTATCGTA
CCTGCCGACCCCATGTGCTGGACCAACGAGCACGTCCGACAATGGGTCCA
GTGGGCCATTAAAGAATTCAGCTTAAAAGATGTTGACGTTAACACCTTTA
CAATGACGGGACAAGAATTATGTAAACTAACACGTGAAGAATTCTTACGT
CTAGCTCCCGCATACAACGGCGATATATTGATGGCGCATTTATGCGTCTT
ACGCAAAGAACGACAAGAGAAGCTACGAAACGATTTAACATTTGCACACA
CACAAATATCGACACAACAACAAAACAACAAGATGTTTGCGGGATCAGAT
CTCTCCAATAACGTTGTTCCTGACCCAACTGCATACGCACAGATGGCATT
AAAGTACAACCCGTCATGTCCCTCACCTAAACCAGCATCTCTCCCACCGA
CGACATCACACGGCGGAAGCGGACAAATCCAATTATGGCAATTCTTACTC
GAACTCTTATCCGACCCATCACACGCGAGTTTCATCGCATGGGAAGGTAA
CAACGGCGAATTCAAACTTACCGACCCCGACGAAGTTGCCCGACGATGGG
GTGAACGTAAAAACAAACCCAACATGAACTACGACAAGTTATCGCGTGCT
TTACGATATTATTACGATAAAAACATCATGACCAAAATTCACGGCAAACG
ATATGCATATAAATTCGACTTTCAAGGACTTGCACAATTAAACCAACCAA
TTACCTCAGACGCCCAATTACACGCCGCCCAAGCCGCAGCGGCTGCCTAC
AGAGGTGAATACCCATTCTACTCACCCTATGGACCACCACCCGCCCCAGG
ATCACCATACGGTTACCCATCGTCCTCGTACCCACAATGCTATTCGTCAG
TACAGTCGCCTAGCAACCAATACGGATATCCATGGGGACGCTCATCATAC
CCAACAAGTATGTACAGCCGACAATCATCGGCACCGTACTTTTAGCACCT
TTACCAAATCTCACAACTGAAGATATCGATAAAGCCCTGGCCCCACCATT
GAGTCACAATGCTAATAACGGCGCTAAAGTGCCAAGTTATCCACGCACAG
AAGCTGAAAAACGTCCTGCGTCGCCACCCGTCGGTAGTTATTCCCGATCC
GTGCCCGTTGCACGTGCCGATGGTTCGGAGTATTTAACGAGCTGTGCTTA
CAACCAATCATCTTCGTCTTCATCCTCATCGACTCCATCTTCATCGACAA
ACCGAGATTCAGTCGTCCCTTCAAAATCATTCGAATCACCCCCAACATCT
CACAGTGGAAGCACTATCAATGGGCAGTATGGATGAACAAAGTCTTTTCG
ATTCTTACGAAAACCAAAAAGTTCCTTCGGGAAAGCCACCAAAGCTAACA
GACAGTGACCCATGGTCTAAGAAGCGTTCAATCGAAAGCGATTTTGATGA
TTTTCATATACCACCAAAACGAGCTAATATGTTTGAAAATGAAACTAAAC
CTGAAATTCAACCTGAAGATGACAAGCGTGTTATCGTACCTGCCGACCCC
ATGTGCTGGACCAACGAGCACGTCCGACAATGGGTCCAGTGGGCCATTAA
AGAATTCAGCTTAAAAGATGTTGACGTTAACACCTTTACAATGACGGGAC
AAGAATTATGTAAACTAACACGTGAAGAATTCTTACGTCTAGCTCCCGCA
TACAACGGCGATATATTGATGGCGCATTTATGCGTCTTACGCAAAGAACG
ACAAGAGAAGCTACGAAACGATTTAACATTTGCACACACACAAATATCGA
CACAACAACAAAACAACAAGATGTTTGCGGGATCAGATCTCTCCAATAAC
GTTGTTCCTGACCCAACTGCATACGCACAGATGGCATTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001343XLOC_001343Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00002512-exon-sc0000020-1575043694:550679..550725TCONS_00002512-exon-sc0000020-1575043694:550679..550725Clytia hemisphaericaexon
TCONS_00002512-exon-sc0000020-1575043694:546633..546766TCONS_00002512-exon-sc0000020-1575043694:546633..546766Clytia hemisphaericaexon
TCONS_00002512-exon-sc0000020-1575043694:545494..545932TCONS_00002512-exon-sc0000020-1575043694:545494..545932Clytia hemisphaericaexon
TCONS_00002512-exon-sc0000020-1575043694:544840..545151TCONS_00002512-exon-sc0000020-1575043694:544840..545151Clytia hemisphaericaexon
TCONS_00002512-exon-sc0000020-1575043694:543191..544440TCONS_00002512-exon-sc0000020-1575043694:543191..544440Clytia hemisphaericaexon
TCONS_00002512-exon-sc0000020-1510915933:550679..550725TCONS_00002512-exon-sc0000020-1510915933:550679..550725Clytia hemisphaericaexon
TCONS_00002512-exon-sc0000020-1510915933:546633..546766TCONS_00002512-exon-sc0000020-1510915933:546633..546766Clytia hemisphaericaexon
TCONS_00002512-exon-sc0000020-1510915933:545494..545932TCONS_00002512-exon-sc0000020-1510915933:545494..545932Clytia hemisphaericaexon
TCONS_00002512-exon-sc0000020-1510915933:544840..545151TCONS_00002512-exon-sc0000020-1510915933:544840..545151Clytia hemisphaericaexon
TCONS_00002512-exon-sc0000020-1510915933:543191..544440TCONS_00002512-exon-sc0000020-1510915933:543191..544440Clytia hemisphaericaexon
TCONS_00002512-exon-sc0000020-1491911889:550679..550725TCONS_00002512-exon-sc0000020-1491911889:550679..550725Clytia hemisphaericaexon
TCONS_00002512-exon-sc0000020-1491911889:546633..546766TCONS_00002512-exon-sc0000020-1491911889:546633..546766Clytia hemisphaericaexon
TCONS_00002512-exon-sc0000020-1491911889:545494..545932TCONS_00002512-exon-sc0000020-1491911889:545494..545932Clytia hemisphaericaexon
TCONS_00002512-exon-sc0000020-1491911889:544840..545151TCONS_00002512-exon-sc0000020-1491911889:544840..545151Clytia hemisphaericaexon
TCONS_00002512-exon-sc0000020-1491911889:543191..544440TCONS_00002512-exon-sc0000020-1491911889:543191..544440Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
Erg proteinTCONS_00002512-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000020supercontigsc0000020:543191..550725 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.208351	0.162878	0	28.5197	14.7454	38.6823	36.2607	84.0943	82.5267	46.0603	148.996	107.319	113.94	197.777	198.695	43.1939	83.1456	52.1346	29.7099	17.9672	16.4713	8.05283	8.84822	1.20371	2.04015	21.1463	3.34336	1.60229	4.79753
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000418Ets_dom
IPR003118Pointed_dom
IPR011991WHTH_DNA-bd_dom
IPR013761SAM/pointed
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0043565sequence-specific DNA binding
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Blast
[Close]
BLAST of TCONS_00002512 vs. Swiss-Prot (Human)
Match: ERG (Transcriptional regulator ERG OS=Homo sapiens GN=ERG PE=1 SV=2)

HSP 1 Score: 292.352 bits (747), Expect = 1.617e-89
Identity = 165/330 (50.00%), Postives = 212/330 (64.24%), Query Frame = 2 
Query:  311 SDFDDFHIPPKRANMFENETKPEIQPEDDKRVIVPADPMCWTNEHVRQWVQWAIKEFSLKDVDVNTF-TMTGQELCKLTREEFLRLAPAYNGDILMAHLCVLRKAPLPNLTTEDIDKAL--APPLSHNANNGAKVPSYPRT----EAEKRPASPPVGSYSRSVPVARADGSEYLTSCAYNQXXXXXXXXXXXXXXNRDSVVPSKSFESPPTSHSEYNPSCPSPKPASLPPTTSHGGSGQIQLWQFLLELLSDPSHASFIAWEGNNGEFKLTDPDEVARRWGERKNKPNMNYDKLSRALRYYYDKNIMTKIHGKRYAYKFDFQGLAQLNQP 1279
            S  ++ H+PP   NM  NE          +RVIVPADP  W+ +HVRQW++WA+KE+ L DV++  F  + G+ELCK+T+++F RL P+YN DIL++HL  LR+ PLP+LT++D+DKAL  +P L H  N G     +P T    EA +R  + P   Y    P  R+  + +      ++++  S S+ P +   R  + P +     PTS    NP                 GSGQIQLWQFLLELLSD S++S I WEG NGEFK+TDPDEVARRWGERK+KPNMNYDKLSRALRYYYDKNIMTK+HGKRYAYKFDF G+AQ  QP
Sbjct:  113 SYMEEKHMPP--PNMTTNE----------RRVIVPADPTLWSTDHVRQWLEWAVKEYGLPDVNILLFQNIDGKELCKMTKDDFQRLTPSYNADILLSHLHYLRETPLPHLTSDDVDKALQNSPRLMHARNTGGAAFIFPNTSVYPEATQRITTRPDLPYE---PPRRSAWTGHGHPTPQSKAAQPSPSTVPKTEDQRPQLDPYQILG--PTSSRLANP-----------------GSGQIQLWQFLLELLSDSSNSSCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQP 408
The following BLAST results are available for this feature:
BLAST of TCONS_00002512 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ERG1.617e-8950.00Transcriptional regulator ERG OS=Homo sapiens GN=E... [more]
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