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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00002360 ID=TCONS_00002360|Name=TCONS_00002360|organism=Clytia hemisphaerica|type=transcript|length=858bp
TAGCATCTCAAGTTGTCAACAAATCTTTTTGTTAGCCATTATGATGGCTG
TACTTTTCGGTCTTGCATTGTGGATTATTGAACATTACCAAAACAATGAT
TTCCCAAAATCCTTCATTCATGGTATTGGTAATGGTTTATATTGGTCTAT
TGTTTCCATGACGACAGTTGGTTATGGAGATGTTACACCAAAAAGTCCGA
TTGGGCGACTTATTGCTTGTATTTGGTTATTCTTGGGCGTTATGGTGGGG
TGTATTGTGGTGGCCACCATGACAGATGTTGTAACGGGCGTTGATGATTT
GAATGTATACGGTCAAAAGGTTGCCGTTTTGGGTCATTCGTATGAATCTA
AAACAGCTGAGAAAGATTATCGTGCAGATATTGTTCCTGTTGAATCTTAT
GAAGAAGTTTTGAAAATGGTTCGAGAGGGAGATGTTTTCGCAGGAATGAT
GAATGCCGATCTAGCAGCTTGGTATCAAGATGAGATCAACGATGATACTA
ATCCGACACCGTTAAGGATCGTGCATAAATTACCTGCTAATCTATACGTT
ACTTGCTACCTACCGATTGATGCCCATGAAATGAAGAAGATTTTCGAATG
CATGAGTATATCATCTGATGAAATCTATTTCTACTCCATTGAAGCGTTCA
AGAGATATTGCCATACAGATTCTATCTATATCGGATCAATGGGAGAGCTG
ATTGCAAATAATATCTATATTCAGGTTTTATGTGGAGTTCTGTGCACTTT
GATTGCTTCTGGTTTTGTTTATGACCTCGTTAAATTGTGGAGAGGGCATA
CTCACATTCGACAGATCTTTGGGGAAATCAGAAACTACGAAAATCATTCG
GAAGGAAT Run BLAST on NCBI protein sequence of TCONS_00002360-protein >TCONS_00002360-protein ID=TCONS_00002360-protein|Name=TCONS_00002360-protein|organism=Clytia hemisphaerica|type=polypeptide|length=285bp
SISSCQQIFLLAIMMAVLFGLALWIIEHYQNNDFPKSFIHGIGNGLYWSI
VSMTTVGYGDVTPKSPIGRLIACIWLFLGVMVGCIVVATMTDVVTGVDDL
NVYGQKVAVLGHSYESKTAEKDYRADIVPVESYEEVLKMVREGDVFAGMM
NADLAAWYQDEINDDTNPTPLRIVHKLPANLYVTCYLPIDAHEMKKIFEC
MSISSDEIYFYSIEAFKRYCHTDSIYIGSMGELIANNIYIQVLCGVLCTL
IASGFVYDLVKLWRGHTHIRQIFGEIRNYENHSEG Run BLAST on NCBI transcript from alignment at sc0000019:59473..60330 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00002360 ID=TCONS_00002360|Name=TCONS_00002360|organism=Clytia hemisphaerica|type=transcript|length=858bp|location=Sequence derived from alignment at sc0000019:59473..60330 (Clytia hemisphaerica)
ATTCCTTCCGAATGATTTTCGTAGTTTCTGATTTCCCCAAAGATCTGTCG
AATGTGAGTATGCCCTCTCCACAATTTAACGAGGTCATAAACAAAACCAG
AAGCAATCAAAGTGCACAGAACTCCACATAAAACCTGAATATAGATATTA
TTTGCAATCAGCTCTCCCATTGATCCGATATAGATAGAATCTGTATGGCA
ATATCTCTTGAACGCTTCAATGGAGTAGAAATAGATTTCATCAGATGATA
TACTCATGCATTCGAAAATCTTCTTCATTTCATGGGCATCAATCGGTAGG
TAGCAAGTAACGTATAGATTAGCAGGTAATTTATGCACGATCCTTAACGG
TGTCGGATTAGTATCATCGTTGATCTCATCTTGATACCAAGCTGCTAGAT
CGGCATTCATCATTCCTGCGAAAACATCTCCCTCTCGAACCATTTTCAAA
ACTTCTTCATAAGATTCAACAGGAACAATATCTGCACGATAATCTTTCTC
AGCTGTTTTAGATTCATACGAATGACCCAAAACGGCAACCTTTTGACCGT
ATACATTCAAATCATCAACGCCCGTTACAACATCTGTCATGGTGGCCACC
ACAATACACCCCACCATAACGCCCAAGAATAACCAAATACAAGCAATAAG
TCGCCCAATCGGACTTTTTGGTGTAACATCTCCATAACCAACTGTCGTCA
TGGAAACAATAGACCAATATAAACCATTACCAATACCATGAATGAAGGAT
TTTGGGAAATCATTGTTTTGGTAATGTTCAATAATCCACAATGCAAGACC
GAAAAGTACAGCCATCATAATGGCTAACAAAAAGATTTGTTGACAACTTG
AGATGCTA Coding sequence (CDS) from alignment at sc0000019:59473..60330 >TCONS_00002360 ID=TCONS_00002360|Name=TCONS_00002360|organism=Clytia hemisphaerica|type=CDS|length=855bp|location=Sequence derived from alignment at sc0000019:59473..60330 (Clytia hemisphaerica)
TCCTTCCGAATGATTTTCGTAGTTTCTGATTTCCCCAAAGATCTGTCGAA
TGTGAGTATGCCCTCTCCACAATTTAACGAGGTCATAAACAAAACCAGAA
GCAATCAAAGTGCACAGAACTCCACATAAAACCTGAATATAGATATTATT
TGCAATCAGCTCTCCCATTGATCCGATATAGATAGAATCTGTATGGCAAT
ATCTCTTGAACGCTTCAATGGAGTAGAAATAGATTTCATCAGATGATATA
CTCATGCATTCGAAAATCTTCTTCATTTCATGGGCATCAATCGGTAGGTA
GCAAGTAACGTATAGATTAGCAGGTAATTTATGCACGATCCTTAACGGTG
TCGGATTAGTATCATCGTTGATCTCATCTTGATACCAAGCTGCTAGATCG
GCATTCATCATTCCTGCGAAAACATCTCCCTCTCGAACCATTTTCAAAAC
TTCTTCATAAGATTCAACAGGAACAATATCTGCACGATAATCTTTCTCAG
CTGTTTTAGATTCATACGAATGACCCAAAACGGCAACCTTTTGACCGTAT
ACATTCAAATCATCAACGCCCGTTACAACATCTGTCATGGTGGCCACCAC
AATACACCCCACCATAACGCCCAAGAATAACCAAATACAAGCAATAAGTC
GCCCAATCGGACTTTTTGGTGTAACATCTCCATAACCAACTGTCGTCATG
GAAACAATAGACCAATATAAACCATTACCAATACCATGAATGAAGGATTT
TGGGAAATCATTGTTTTGGTAATGTTCAATAATCCACAATGCAAGACCGA
AAAGTACAGCCATCATAATGGCTAACAAAAAGATTTGTTGACAACTTGAG
ATGCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00002360-exon-sc0000019-1491911889:59473..60330 | TCONS_00002360-exon-sc0000019-1491911889:59473..60330 | Clytia hemisphaerica | exon |
| TCONS_00002360-exon-sc0000019-1510915933:59473..60330 | TCONS_00002360-exon-sc0000019-1510915933:59473..60330 | Clytia hemisphaerica | exon |
| TCONS_00002360-exon-sc0000019-1575043694:59473..60330 | TCONS_00002360-exon-sc0000019-1575043694:59473..60330 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000019 | supercontig | sc0000019:59473..60330 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006813 | potassium ion transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005249 | voltage-gated potassium channel activity |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0008076 | voltage-gated potassium channel complex |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006813 |
potassium ion transport |
| cellular_component |
GO:0008076 |
voltage-gated potassium channel complex |
| molecular_function |
GO:0005249 |
voltage-gated potassium channel activity |
Blast
The following BLAST results are available for this feature:
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