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TCONS_00002283 (transcript) - C. hemisphaerica

Overview
NameTCONS_00002283
Unique NameTCONS_00002283
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2456

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00002283 ID=TCONS_00002283|Name=TCONS_00002283|organism=Clytia hemisphaerica|type=transcript|length=2456bp
atttttcaaaaaatgttccgCGCAAGAACGGTTAAtccatttcttttttt
ccatgtcgttTCAGTTCGAATTCCTGGAGCATTTGGTCTTGAAGGTATCA
TATCATCCATTCTGGCGTTGTGTCTACTTCCCAGTTGACGAGCACCATTC
TCTGTTTTCACGAAAACCACTTGTCATCCCTCGATACCGTAAATCTGTCG
TTGTCAATCACGTGACTCCGAACTTCATTTCCGTTTCCGTACCAACCGGG
CGCTATCATGTGATTTTTCGTTATCGATTtcctggaattttgaaaataat
ggcGTTATTAGCGACCGTTATGTTTTTCAACAGCTGGTTCCGTTTGGATG
GTTTCACCAAGTTGTTTTTAGGGCTTCGACTCTTTTACAATCGAATGCAA
gcatttcagaaaattttcatttggttCTGTATCGATTTAATTGACATCTT
TTTGCCGCGATCAATAGATAAAAACATTCAACTCGTGGTCAAATGTATCA
ATTCTGGTGACGAAAAGGGTAATTTAACATACAACCCATTTAAGATTCGA
CAATTGTCAAGTCATTTGTTTTGTCAAATCCGAACGAAAATGAAATCATC
AAGCAGTCATCTTCTTGATCTGATCATTAAGAAACAAAAACCTGCACCAA
AACCATCTACAAAGTCGGCAACTCCacccaaaacaaagaaatcgtcaact
cctccaaaatcgaaatcaaATAAACATTCAAAGCACGcttcatcaaaatc
aaccaaaccatcaaaacaaacaccaCCGAAATCTTCGAAACCTACGGCac
cgaaaatgaaaaattcaccTGATAATGTTTCCAGAGATTCGTCTCCGCTG
AAACAGTACCTGGAGAACAGCGGTGTATCGGATCTCGACACATCATTTCA
GTTTGATGGTTTGGCGTACCGATCTCCACCAACGCCCCCTAAACATACAA
AGAAAAGCTACCGTAAACGACACGCCCGACTTCACGGAGACTCATCTTCC
AATAAAACTCCCTCGCCTGTCATCATACACAAGAAAATGGCTCCTATTCC
TAAAGAAGACACACTTTGTCCTATTCCTAAAGAAGAGACTCTTTGCCCAA
TGCTAGTAAATGCCATTTCTAAACAGGAAACATTATGCCCAACCCTTGAC
GGGAGAGTCACTAACAAAACACTGCCTTCAGTGTTGGACTCGCCACTTCT
TGAAGATTTGAATCTATCTCCTAAACGACCGACAACCTTATCTTTGGATC
GTTCTAGCGTAAAGAGAACTTCACCACCAGTTTCCCCAAAACCTAACCGT
GTGGTGTTCTCTAGCAATAAAGTGCTACCACCACCCGCCTCCCCACGCCA
ATCTACACCTCCAAAGAAATTGACCCCGCCCATGAAAGTGAACCCACTTG
TATCTCCGAAGCCAACTTTCAAGGTGACAACCAAAAAAACACCACCGCCT
GTCTCCCTGAAGAACACCCAAGAAACAAGTCCAAACACATCAGGGCCATC
TGGTCTACGATCATCTCCACCGCGGAAACCAGGTCTCAGATCGTCAACTC
CAGACATCAACTCCAGCTCCTTCCAGACATCTCCAGGGCGCTCTACATCC
CCAAAGGTTGGACAAATCTTGGATTCGTTACGAAATTCGGGCAGCGATGA
AGACGGATCACCGAGAATTGAAAAATACGTACCaatcaaaattggaaaat
attccaaactgTCACCAACAAAAGTACCGAATATTCGACTTGCATCTTCA
CCAAGGAAATCACCAAATGGCAATCTTCAATCTCCGGTATCGCCTTCTCC
TCGTATCGAAcccaacaacaacaataataaaTTTCTGTATTTGCCAGAGC
TAACAGGAACATCAGATCAATCACCAAGATACAACAGTGGTGGCAGTGAA
GGTATTGAATATGAATGGGACGGCATGATGGAGAGTTTCCAAGGTACCTC
ACCACTTACTGCAAGTTTCCACGAAATCGATGTTGAACGAATGGTGTCAT
CAGATGAACCTTCGTCACCATTCGACGAAGAAAGTTTCTCACCAAAGTCT
TCAAGTTCACCAGAACCGAGCAGTTCATCTGCAGACCAATATGATTCTTC
ATCACCAGATGGTCATACATCATTAGATGATGTGGAGGAGAATCAACAAG
AAGTGTATCGCATCTACATGTCTAATTCACCCAAAGAAGCTTACAAGATC
TCTCCACATTCTCCAGGaccaaataaacaaaatttgggACACTCCCCCGT
TATGCACAAACATCATTTTGAACCCTCCTCCGGAGGGGAACAAGACGATG
AAGACACGCAAGCATCGCCTCGAAGGGGGAGACCTAGCCTTAAAGGTGCT
CAATACGTTGATACTTTTAAACGACAACCTCAACACCAAGTTCGTAGAAA
ACGGCACAGCGCTAATGCTAAGTAAGGGAGGAGCTATTCATGCTTACCAG
ATTACC
Run BLAST on NCBI

protein sequence of TCONS_00002283-protein

>TCONS_00002283-protein ID=TCONS_00002283-protein|Name=TCONS_00002283-protein|organism=Clytia hemisphaerica|type=polypeptide|length=807bp
FFKKCSAQERLIHFFFSMSFQFEFLEHLVLKVSYHPFWRCVYFPVDEHHS
LFSRKPLVIPRYRKSVVVNHVTPNFISVSVPTGRYHVIFRYRFPGILKIM
ALLATVMFFNSWFRLDGFTKLFLGLRLFYNRMQAFQKIFIWFCIDLIDIF
LPRSIDKNIQLVVKCINSGDEKGNLTYNPFKIRQLSSHLFCQIRTKMKSS
SSHLLDLIIKKQKPAPKPSTKSATPPKTKKSSTPPKSKSNKHSKHASSKS
TKPSKQTPPKSSKPTAPKMKNSPDNVSRDSSPLKQYLENSGVSDLDTSFQ
FDGLAYRSPPTPPKHTKKSYRKRHARLHGDSSSNKTPSPVIIHKKMAPIP
KEDTLCPIPKEETLCPMLVNAISKQETLCPTLDGRVTNKTLPSVLDSPLL
EDLNLSPKRPTTLSLDRSSVKRTSPPVSPKPNRVVFSSNKVLPPPASPRQ
STPPKKLTPPMKVNPLVSPKPTFKVTTKKTPPPVSLKNTQETSPNTSGPS
GLRSSPPRKPGLRSSTPDINSSSFQTSPGRSTSPKVGQILDSLRNSGSDE
DGSPRIEKYVPIKIGKYSKLSPTKVPNIRLASSPRKSPNGNLQSPVSPSP
RIEPNNNNNKFLYLPELTGTSDQSPRYNSGGSEGIEYEWDGMMESFQGTS
PLTASFHEIDVERMVSSDEPSSPFDEESFSPKSSSSPEPSSSSADQYDSS
SPDGHTSLDDVEENQQEVYRIYMSNSPKEAYKISPHSPGPNKQNLGHSPV
MHKHHFEPSSGGEQDDEDTQASPRRGRPSLKGAQYVDTFKRQPQHQVRRK
RHSANAK
Run BLAST on NCBI

transcript from alignment at sc0000019:906495..913540+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00002283 ID=TCONS_00002283|Name=TCONS_00002283|organism=Clytia hemisphaerica|type=transcript|length=7046bp|location=Sequence derived from alignment at sc0000019:906495..913540+ (Clytia hemisphaerica)
atttttcaaaaaatgttccgCGCAAGAACGGTTAAtccatttcttttttt ccatgtcgttTCAGTTCGAATTCCTGGAGCATTTGGTCTTGAAGGTATCA TATCATCCATTCTGGCGTTGTGTCTACTTCCCAGTTGACGAGCACCATTC TCTGTTTTCACGAAAACCACTTGTCATCCCTCGATACCGTAAATCTGTCG TTGTCAATCACGTGACTCCGAACTTCATTTCCGTTTCCGTACCAACCGGG CGCTATCATGTGATTTTTCGTTATCGATTtcctggaattttgaaaataat ggcGTTATTAGCGACCGTTATGTTTTTCAACAGCTGGTTCCGTTTGGATG GTTTCACCAAGTTGTTTTTAGGGCTTCGACTCTTTTACAATCGAATGCAA gcatttcagaaaattttcatttggttCTGTATCGATTTAATTGACATCTT TTTGCCGCGATCAATAGATAAAAACATTCAACTCGTGGTCAAATGTATCA ATTCTGGTGACGAAAAGGGTAATTTAACATACAACCCATTTAAGATTCGA CAATTGTCAAGTCATTTGTTTTGTCAAATCCGAACGAAAATGAAATCATC AAGCAGTCATCTTCTTGATCTGATCATTAAGAAACAAAAACCTGCACCAA AACCATCTACAAAGTCGGCAACTCCacccaaaacaaagaaatcgtcaact cctccaaaatcgaaatcaaATAAACATTCAAAGCACGcttcatcaaaatc aaccaaaccatcaaaacaaacaccaCCGAAATCTTCGAAACCTACGGCac cgaaaatgaaaaattcaccTGATAATGTTTCCAGAGATTCGTCTCCGCTG AAACAGTACCTGGAGAACAGCGGTGTATCGGATCTCGACACATCATTTCA GTTTGATGGTTTGGCGTACCGATCTCCACCAACGCCCCCTAAACATACAA AGAAAAGCTACCGTAAACGACACGCCCGACTTCACGGAGACTCATCTTCC AATAAAACTCCCTCGCCTGTCATCATACACAAGAAAATGGCTCCTATTCC TAAAGAAGACACACTTTGTCCTATTCCTAAAGAAGAGACTCTTTGCCCAA TGCTAGTAAATGCCATTTCTAAACAGGAAACATTATGCCCAACCCTTGAC GGGAGAGTCACTAACAAAACACTGCCTTCAGTGTTGGACTCGCCACTTCT TGAAGATTTGAATCTATCTCCTAAACGACCGACAACCTTATCTTTGGATC GTTCTAGCGTAAAGAGAACTTCACCACCAGTTTCCCCAAAACCTAACCGT GTGGTGTTCTCTAGCAATAAAGTGCTACCACCACCCGCCTCCCCACGCCA ATCTACACCTCCAAAGAAATTGACCCCGCCCATGAAAGTGAACCCACTTG TATCTCCGAAGCCAACTTTCAAGGTGACAACCAAAAAAACACCACCGCCT GTCTCCCTGAAGAACACCCAAGAAACAAGTCCAAACACATCAGGGCCATC TGGTCTACGATCATCTCCACCGCGGAAACCAGGTCTCAGATCGTCAACTC CAGACATCAACTCCAGCTCCTTCCAGACATCTCCAGGGCGCTCTACATCC CCAAAGGTTGGACAAATCTTGGATTCGTTACGAAATTCGGGCAGCGATGA AGACGGATCACCGAGAATTGAAAAATACGTACCaatcaaaattggaaaat attccaaactgTCACCAACAAAAGTACCGAATATTCGACTTGCATCTTCA CCAAGGAAATCACCAAATGGCAATCTTCAATCTCCGGTATCGCCTTCTCC TCGTATCGAAcccaacaacaacaataataaaTTTCTGTATTTGCCAGAGC TAACAGGAACATCAGATCAATCACCAAGATACAACAGTGGTGGCAGTGAA GGTATTGAATATGAATGGGACGGCATGATGGAGAGTTTCCAAGGTAAaac taattttgataaaaaaagagtCAAATAGACTAACTCGCAAAATCCTTTTC TTAAAGAGTCAAAAAGTCCTTCTCTTAAAGAAATTGCTAAATTCACCGGT TAAGCCATAAAATTGGAGTTAATAGTACATaattagactagtaaactagt cggttattacttataataaaactgtcaatcaaataatgtaaacactaatt aaatattcagcgcgcgtgagagaaaaggaaaatactcgactagaagcttc ttccaacGCCTTATtctcttcacctaaaatcgtaaggagagacatacaga tttctctatgtctgacccgtgcgagattgtatttatttttctttctgttt attgcatttttggaaatgctcatttatttataagttcccatgtttaatgt tatatgaaatatcatttagtcaaaaaagttggatggattctcaaaaacct aaaaaaggttgtaaaattaaacaacgtttttcgaggaaagaagcttctag tcgttgaaattcagaaaagagcgTGTCTTTTTCTTTGTcctcacctcttc gattctttttatttggagcttgaattttttgtatatgggtctgttttcaa cgactagtttactagtctagtacATAATGTGCTTTTCGTATGCCTAAATG GTAGCAATTTCCCTTATTCcgatcattttttaaaaatcatttctttGAAT CCCCGAAATTTATACATCCAAATTGACTGCAATAGGCGACTAGGCTGTTT TCTCTCTTAAGGTACCTCACCACTTACTGCAAGTTTCCACGAAATCGATG TTGAACGAATGGTGTCATCAGATGAACCTTCGTCACCATTCGACGAAGAA AGTTTCTCACCAAAGTCTTCAAGTTCACCAGAACCGAGCAGTTCATCTGC AGACCAATATGATTCTTCATCACCAGATGGTCATACATCATTAGATGATG TGGAGGAGAATCAACAAGAAGTGTATCGCATCTACATGTCTAATTCACCC AAAGAAGCTTACAAGATCTCTCCACATTCTCCAGGaccaaataaacaaaa tttgggACACTCCCCCGTTATGCACAAACATCATTTTGAACCCTCCTCCG GAGGGGAACAAGACGATGAAGACACGCAAGCATCGCCTCGAAGGGGGAGA CCTAGCCTTAAAGGTGCTCAATACGTTGATACTTTTAAACGACAACCTCA ACACCAAGTTCGTAGAAAACGGCACAGCGCTAATGCTAAGTAAGGGAGGT AATGCAATCCACATTAAATCTTGCTAAAGATAGTTGAGCTCAACATAGCC GGAGGATACCACAGATTTTCTGGGAATAGGCTCTTCCATAAAATTTTTGT ATATGGGGGATGAGGATATATtagatattttgtccggggagtagtgaaaa atctgcaaaatttgcgtTGTTTTGGGGACAAACTTGCTCTGATTcggggt gattttgaatgtccagggggtcaactgatgcttgtccatgGGGTGAGATT TGTTGTCTGAGgatcaaaattcacaatgtctgGGGgtgaatttccaaaaa atgttacatcctccacccccatattcaaattctttctggaagagcccaat tcgATTTCGGTTTGCATGGTTTACGAACGAATTAGATATTTCATGCAATG TAATTTGGGAAACAATAATTAACTACGCAATTGAAGGAAACAAGGTGATG ACATGGAGAACATTATCGAGATTATTTGGAATGTTGTGGTGGTGATCCAC TTCAAAGTATGTTCTTTGTACCAGTGGGACTGGATTGCTATGGCTAGGGC TTGCGCGTGTACAATAGTtcattagtttttgtttttatatcgTCTTTGTT AACATTACCCTGAAAAGGAGGTTTTTAAATTGTTCAATATCTTATTAATA TTTATTTGTTCAGAATTTTAATGCATAAACTTTGTTcgacttttttagaa aatttaaaaactgaaagtattatttattttattcggaattgaatctATTT GAAGTTTCAAGGGTTTTGTGaagtaaagtctgtctcaatatgaTCTGCAT CAGAATAGGCAATGACTTTGACCGAATTTGCTTGTGCTTGCTGAAAATAT CATAAAGAGTGGAGTATAccaattagaaaaaataaaatgaatttggaaaa atgaagaagaaaaatatcgtCCTTGTGATGAACTGTGCATAATTTCCCAT TTTCACAACAGTAATCCATAACTTATATAATGATCACtgtgaaaaattta ttcaaaaatatgaatttattATCGAACGATATAGTCCAAAGTTTATCACT TTATTCTATTTTTGTTGAATCTTTTCTATTTTCGAAAAGCCCAAAACCTC CATTTCAttcgaattttatcaaaaattacagccttttttgtctctgcTGC AGATAAtatcgagacagactttagtgacCAGAGTTTTTTTTCAGGCCTCG GGTTTTCCAATTTCTTACACTATCTTCAAGTGAGATATTTGATGCCGACA TGCGCCAGAAAATGGGCACTTACCTTAAACTGATTAGATATGAGTTCTTC TTACTTTTAGTGGGATATAATATTTTGTGAAGGATTTGCGCCTTTTAGTT AGAATTTACTGTATTTCCAAATATGTTgttcatcaaatttttattgtatG ATAGTTCATCTCAGTATTTTCTAAATAGTCTAAAATTTCCATGTTGCAAT TAAATCTGGACAGACATTTTGTCCTGAATGGTACAGCGTTTCCTATTtag ggagcggtcataaagtatctactagggggggtatgaggattctagggggg gggggggNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNtccaattttttttgggaaactcaagagaaaatgtaggaagt ctaatttcatagttttacgtttgaagatttcaaaaatttttcggcctTAC GGCCGACAACTAATAATTTATCTTATTGGATATATGTACATTTCAGATTG ccattatttgggcatcatcgccttgcccttttggtttgtaaCATTGAGCT AGGTGAGGGAAGTAGGTTAGTGGCTCTCACAGCccatcagagtggtttga aaaagtacttcttaaaagaaatttgtcaaaacaaagtgtcttttagctta aatggtggtgaaaaatattgaaattttcgcccgtcggcgcaaaccatggt tgcgcctccttagcatCTGCTAATGTCAAAACACCTTAtattcaaattac aaaaagcaaattccaagtttcttgactcaaagattccgggcgttactttc aaccatacTGCTCTTACAgattaatattttcacttaataatggagggcgc aagtaaggacaaaaaataccaggggcgccaatttcatagtttgcatcccc cgaaaattaagccaggtcgctactggggaaaataagccgtatttttttcc aaattttacagaaGCTCAGAGAAAACCACTAGATGATTCTTGTGTTAACC CTGTTATACTTTAATTTAACAGGGCTAAACTATCTCCCTtaccttatttt gacataaaaaactgtcatacaaacaaataatactctCTGTACCGCATCTG NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNgttcgaaatttttttcgagggtttagaaaggggtgcga aattttttttggatttttcaaaatatcctccacccccctctagtagatac tttatgaccgctcccttaCGACATACTGGCGATTTTTTTCCACATTTTTT CTAGACATTTTCTTAAAacgttgaaaaatgaaagaaaacattCTTGACTT TGTTATTTATAAGGGAACCGAGATATTTCGAGAGCTAAATTTACAATTAT CCCCTATTTTGGGCGTTGGATGAATGGGGCACTGACCTGGGtactttttc tttaattttttcattattcagattgtattgggctcttccagaaaaaaatt gaatatcccCATattggaggatataacattttttgaaaatttacccccgg acattgtgactttcgACACCCCGGACAAAAGATGTAACCTTCCGGACAAT CAGTTGACCCCGGACCCCCCGGGCATTCATATTAACCCCTAAACAGAGCA GTTTTGCCCCCTAAACAagacaaattttgtagatttttcaataCCCCCTG GACAAAATATCccccccccccccccatgtacaaaaattttatGTAAGAGC CCATTTTAATAATCATAACAAGTCAGGCCAAAATTTACCTGTTCTAATAA AAGTGAGTTATGTAGACAAGTTTGGTATATCTCGATCGGGGTACGTCTTT CATTCGGGAAACGTATTTTGTAatacacctctgtctcacagcctGGTGTA ATTTCTTCctagtggggatgaaaatttctatgaCAATTATAATGGGGATA TAGATTATATTGTTCTCGAGttaaaaaggttggtttttgagtgcaattat tttccattgaattttaaattcgATTTTCCAATGGGGCTGAAACTGTAGGG TATTTTCCCCACCAGCGACAACATTTTGACCGAATTTTCCAGTGAGCGGG TGTAATAAAAGTTAAGAGTTAAGAGTACAGAGTTAAGCAGCCTGTTGGAC CCCCATTTAGAAGGATTCACTCCGAATTTTCATATTTAAATTATAAATCG AATCATGTTCATGTTCCAATGTATctgttcattttgttttttattcagcT AATGATAATAATGAAAAAAACAGAAGGTGAAAAAATAACTAAAACCCATC ACATATATGTCACACTTCAGGAGCTATTCATGCTTACCAGATTACC

Coding sequence (CDS) from alignment at sc0000019:906495..913540+

>TCONS_00002283 ID=TCONS_00002283|Name=TCONS_00002283|organism=Clytia hemisphaerica|type=CDS|length=4848bp|location=Sequence derived from alignment at sc0000019:906495..913540+ (Clytia hemisphaerica)
tttttcaaaaaatgttccgCGCAAGAACGGTTAAtccatttctttttttc
catgtcgttTCAGTTCGAATTCCTGGAGCATTTGGTCTTGAAGGTATCAT
ATCATCCATTCTGGCGTTGTGTCTACTTCCCAGTTGACGAGCACCATTCT
CTGTTTTCACGAAAACCACTTGTCATCCCTCGATACCGTAAATCTGTCGT
TGTCAATCACGTGACTCCGAACTTCATTTCCGTTTCCGTACCAACCGGGC
GCTATCATGTGATTTTTCGTTATCGATTtcctggaattttgaaaataatg
gcGTTATTAGCGACCGTTATGTTTTTCAACAGCTGGTTCCGTTTGGATGG
TTTCACCAAGTTGTTTTTAGGGCTTCGACTCTTTTACAATCGAATGCAAg
catttcagaaaattttcatttggttCTGTATCGATTTAATTGACATCTTT
TTGCCGCGATCAATAGATAAAAACATTCAACTCGTGGTCAAATGTATCAA
TTCTGGTGACGAAAAGGGTAATTTAACATACAACCCATTTAAGATTCGAC
AATTGTCAAGTCATTTGTTTTGTCAAATCCGAACGAAAATGAAATCATCA
AGCAGTCATCTTCTTGATCTGATCATTAAGAAACAAAAACCTGCACCAAA
ACCATCTACAAAGTCGGCAACTCCacccaaaacaaagaaatcgtcaactc
ctccaaaatcgaaatcaaATAAACATTCAAAGCACGcttcatcaaaatca
accaaaccatcaaaacaaacaccaCCGAAATCTTCGAAACCTACGGCacc
gaaaatgaaaaattcaccTGATAATGTTTCCAGAGATTCGTCTCCGCTGA
AACAGTACCTGGAGAACAGCGGTGTATCGGATCTCGACACATCATTTCAG
TTTGATGGTTTGGCGTACCGATCTCCACCAACGCCCCCTAAACATACAAA
GAAAAGCTACCGTAAACGACACGCCCGACTTCACGGAGACTCATCTTCCA
ATAAAACTCCCTCGCCTGTCATCATACACAAGAAAATGGCTCCTATTCCT
AAAGAAGACACACTTTGTCCTATTCCTAAAGAAGAGACTCTTTGCCCAAT
GCTAGTAAATGCCATTTCTAAACAGGAAACATTATGCCCAACCCTTGACG
GGAGAGTCACTAACAAAACACTGCCTTCAGTGTTGGACTCGCCACTTCTT
GAAGATTTGAATCTATCTCCTAAACGACCGACAACCTTATCTTTGGATCG
TTCTAGCGTAAAGAGAACTTCACCACCAGTTTCCCCAAAACCTAACCGTG
TGGTGTTCTCTAGCAATAAAGTGCTACCACCACCCGCCTCCCCACGCCAA
TCTACACCTCCAAAGAAATTGACCCCGCCCATGAAAGTGAACCCACTTGT
ATCTCCGAAGCCAACTTTCAAGGTGACAACCAAAAAAACACCACCGCCTG
TCTCCCTGAAGAACACCCAAGAAACAAGTCCAAACACATCAGGGCCATCT
GGTCTACGATCATCTCCACCGCGGAAACCAGGTCTCAGATCGTCAACTCC
AGACATCAACTCCAGCTCCTTCCAGACATCTCCAGGGCGCTCTACATCCC
CAAAGGTTGGACAAATCTTGGATTCGTTACGAAATTCGGGCAGCGATGAA
GACGGATCACCGAGAATTGAAAAATACGTACCaatcaaaattggaaaata
ttccaaactgTCACCAACAAAAGTACCGAATATTCGACTTGCATCTTCAC
CAAGGAAATCACCAAATGGCAATCTTCAATCTCCGGTATCGCCTTCTCCT
CGTATCGAAcccaacaacaacaataataaaTTTCTGTATTTGCCAGAGCT
AACAGGAACATCAGATCAATCACCAAGATACAACAGTGGTGGCAGTGAAG
GTATTGAATATGAATGGGACGGCATGATGGAGAGTTTCCAAGGTACCTCA
CCACTTACTGCAAGTTTCCACGAAATCGATGTTGAACGAATGGTGTCATC
AGATGAACCTTCGTCACCATTCGACGAAGAAAGTTTCTCACCAAAGTCTT
CAAGTTCACCAGAACCGAGCAGTTCATCTGCAGACCAATATGATTCTTCA
TCACCAGATGGTCATACATCATTAGATGATGTGGAGGAGAATCAACAAGA
AGTGTATCGCATCTACATGTCTAATTCACCCAAAGAAGCTTACAAGATCT
CTCCACATTCTCCAGGaccaaataaacaaaatttgggACACTCCCCCGTT
ATGCACAAACATCATTTTGAACCCTCCTCCGGAGGGGAACAAGACGATGA
AGACACGCAAGCATCGCCTCGAAGGGGGAGACCTAGCCTTAAAGGTGCTC
AATACGTTGATACTTTTAAACGACAACCTCAACACCAAGTTCGTAGAAAA
CGGCACAGCGCTAATGCTAAGTAAtttttcaaaaaatgttccgCGCAAGA
ACGGTTAAtccatttctttttttccatgtcgttTCAGTTCGAATTCCTGG
AGCATTTGGTCTTGAAGGTATCATATCATCCATTCTGGCGTTGTGTCTAC
TTCCCAGTTGACGAGCACCATTCTCTGTTTTCACGAAAACCACTTGTCAT
CCCTCGATACCGTAAATCTGTCGTTGTCAATCACGTGACTCCGAACTTCA
TTTCCGTTTCCGTACCAACCGGGCGCTATCATGTGATTTTTCGTTATCGA
TTtcctggaattttgaaaataatggcGTTATTAGCGACCGTTATGTTTTT
CAACAGCTGGTTCCGTTTGGATGGTTTCACCAAGTTGTTTTTAGGGCTTC
GACTCTTTTACAATCGAATGCAAgcatttcagaaaattttcatttggttC
TGTATCGATTTAATTGACATCTTTTTGCCGCGATCAATAGATAAAAACAT
TCAACTCGTGGTCAAATGTATCAATTCTGGTGACGAAAAGGGTAATTTAA
CATACAACCCATTTAAGATTCGACAATTGTCAAGTCATTTGTTTTGTCAA
ATCCGAACGAAAATGAAATCATCAAGCAGTCATCTTCTTGATCTGATCAT
TAAGAAACAAAAACCTGCACCAAAACCATCTACAAAGTCGGCAACTCCac
ccaaaacaaagaaatcgtcaactcctccaaaatcgaaatcaaATAAACAT
TCAAAGCACGcttcatcaaaatcaaccaaaccatcaaaacaaacaccaCC
GAAATCTTCGAAACCTACGGCaccgaaaatgaaaaattcaccTGATAATG
TTTCCAGAGATTCGTCTCCGCTGAAACAGTACCTGGAGAACAGCGGTGTA
TCGGATCTCGACACATCATTTCAGTTTGATGGTTTGGCGTACCGATCTCC
ACCAACGCCCCCTAAACATACAAAGAAAAGCTACCGTAAACGACACGCCC
GACTTCACGGAGACTCATCTTCCAATAAAACTCCCTCGCCTGTCATCATA
CACAAGAAAATGGCTCCTATTCCTAAAGAAGACACACTTTGTCCTATTCC
TAAAGAAGAGACTCTTTGCCCAATGCTAGTAAATGCCATTTCTAAACAGG
AAACATTATGCCCAACCCTTGACGGGAGAGTCACTAACAAAACACTGCCT
TCAGTGTTGGACTCGCCACTTCTTGAAGATTTGAATCTATCTCCTAAACG
ACCGACAACCTTATCTTTGGATCGTTCTAGCGTAAAGAGAACTTCACCAC
CAGTTTCCCCAAAACCTAACCGTGTGGTGTTCTCTAGCAATAAAGTGCTA
CCACCACCCGCCTCCCCACGCCAATCTACACCTCCAAAGAAATTGACCCC
GCCCATGAAAGTGAACCCACTTGTATCTCCGAAGCCAACTTTCAAGGTGA
CAACCAAAAAAACACCACCGCCTGTCTCCCTGAAGAACACCCAAGAAACA
AGTCCAAACACATCAGGGCCATCTGGTCTACGATCATCTCCACCGCGGAA
ACCAGGTCTCAGATCGTCAACTCCAGACATCAACTCCAGCTCCTTCCAGA
CATCTCCAGGGCGCTCTACATCCCCAAAGGTTGGACAAATCTTGGATTCG
TTACGAAATTCGGGCAGCGATGAAGACGGATCACCGAGAATTGAAAAATA
CGTACCaatcaaaattggaaaatattccaaactgTCACCAACAAAAGTAC
CGAATATTCGACTTGCATCTTCACCAAGGAAATCACCAAATGGCAATCTT
CAATCTCCGGTATCGCCTTCTCCTCGTATCGAAcccaacaacaacaataa
taaaTTTCTGTATTTGCCAGAGCTAACAGGAACATCAGATCAATCACCAA
GATACAACAGTGGTGGCAGTGAAGGTATTGAATATGAATGGGACGGCATG
ATGGAGAGTTTCCAAGGTACCTCACCACTTACTGCAAGTTTCCACGAAAT
CGATGTTGAACGAATGGTGTCATCAGATGAACCTTCGTCACCATTCGACG
AAGAAAGTTTCTCACCAAAGTCTTCAAGTTCACCAGAACCGAGCAGTTCA
TCTGCAGACCAATATGATTCTTCATCACCAGATGGTCATACATCATTAGA
TGATGTGGAGGAGAATCAACAAGAAGTGTATCGCATCTACATGTCTAATT
CACCCAAAGAAGCTTACAAGATCTCTCCACATTCTCCAGGaccaaataaa
caaaatttgggACACTCCCCCGTTATGCACAAACATCATTTTGAACCCTC
CTCCGGAGGGGAACAAGACGATGAAGACACGCAAGCATCGCCTCGAAGGG
GGAGACCTAGCCTTAAAGGTGCTCAATACGTTGATACTTTTAAACGACAA
CCTCAACACCAAGTTCGTAGAAAACGGCACAGCGCTAATGCTAAGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001209XLOC_001209Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00002283-proteinTCONS_00002283-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00002283-exon-sc0000019-1491911889:906495..908437TCONS_00002283-exon-sc0000019-1491911889:906495..908437Clytia hemisphaericaexon
TCONS_00002283-exon-sc0000019-1510915933:906495..908437TCONS_00002283-exon-sc0000019-1510915933:906495..908437Clytia hemisphaericaexon
TCONS_00002283-exon-sc0000019-1575043694:906495..908437TCONS_00002283-exon-sc0000019-1575043694:906495..908437Clytia hemisphaericaexon
TCONS_00002283-exon-sc0000019-1491911889:909206..909692TCONS_00002283-exon-sc0000019-1491911889:909206..909692Clytia hemisphaericaexon
TCONS_00002283-exon-sc0000019-1510915933:909206..909692TCONS_00002283-exon-sc0000019-1510915933:909206..909692Clytia hemisphaericaexon
TCONS_00002283-exon-sc0000019-1575043694:909206..909692TCONS_00002283-exon-sc0000019-1575043694:909206..909692Clytia hemisphaericaexon
TCONS_00002283-exon-sc0000019-1491911889:913515..913540TCONS_00002283-exon-sc0000019-1491911889:913515..913540Clytia hemisphaericaexon
TCONS_00002283-exon-sc0000019-1510915933:913515..913540TCONS_00002283-exon-sc0000019-1510915933:913515..913540Clytia hemisphaericaexon
TCONS_00002283-exon-sc0000019-1575043694:913515..913540TCONS_00002283-exon-sc0000019-1575043694:913515..913540Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000019supercontigsc0000019:906495..913540 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.06584 1.86907 0.725019 0.462535 1.14648 1.36902 0.275811 0.793879 0.608599 1.06031 1.41285 0.54806 2.72079 3.58239 2.49918 3.66288 1.73383 1.59624 0.815695 0.60326 0.982586 0.585511 1.58034 1.92171 20.3833 19.7896 0.205068 0 1.15514 0.837158
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00002283 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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