XLOC_001209 (gene) - C. hemisphaerica

Overview
NameXLOC_001209
Unique NameXLOC_001209
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000019:906495..913540+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001209 ID=XLOC_001209|Name=XLOC_001209|organism=Clytia hemisphaerica|type=gene|length=7046bp|location=Sequence derived from alignment at sc0000019:906495..913540+ (Clytia hemisphaerica)
atttttcaaaaaatgttccgCGCAAGAACGGTTAAtccatttcttttttt ccatgtcgttTCAGTTCGAATTCCTGGAGCATTTGGTCTTGAAGGTATCA TATCATCCATTCTGGCGTTGTGTCTACTTCCCAGTTGACGAGCACCATTC TCTGTTTTCACGAAAACCACTTGTCATCCCTCGATACCGTAAATCTGTCG TTGTCAATCACGTGACTCCGAACTTCATTTCCGTTTCCGTACCAACCGGG CGCTATCATGTGATTTTTCGTTATCGATTtcctggaattttgaaaataat ggcGTTATTAGCGACCGTTATGTTTTTCAACAGCTGGTTCCGTTTGGATG GTTTCACCAAGTTGTTTTTAGGGCTTCGACTCTTTTACAATCGAATGCAA gcatttcagaaaattttcatttggttCTGTATCGATTTAATTGACATCTT TTTGCCGCGATCAATAGATAAAAACATTCAACTCGTGGTCAAATGTATCA ATTCTGGTGACGAAAAGGGTAATTTAACATACAACCCATTTAAGATTCGA CAATTGTCAAGTCATTTGTTTTGTCAAATCCGAACGAAAATGAAATCATC AAGCAGTCATCTTCTTGATCTGATCATTAAGAAACAAAAACCTGCACCAA AACCATCTACAAAGTCGGCAACTCCacccaaaacaaagaaatcgtcaact cctccaaaatcgaaatcaaATAAACATTCAAAGCACGcttcatcaaaatc aaccaaaccatcaaaacaaacaccaCCGAAATCTTCGAAACCTACGGCac cgaaaatgaaaaattcaccTGATAATGTTTCCAGAGATTCGTCTCCGCTG AAACAGTACCTGGAGAACAGCGGTGTATCGGATCTCGACACATCATTTCA GTTTGATGGTTTGGCGTACCGATCTCCACCAACGCCCCCTAAACATACAA AGAAAAGCTACCGTAAACGACACGCCCGACTTCACGGAGACTCATCTTCC AATAAAACTCCCTCGCCTGTCATCATACACAAGAAAATGGCTCCTATTCC TAAAGAAGACACACTTTGTCCTATTCCTAAAGAAGAGACTCTTTGCCCAA TGCTAGTAAATGCCATTTCTAAACAGGAAACATTATGCCCAACCCTTGAC GGGAGAGTCACTAACAAAACACTGCCTTCAGTGTTGGACTCGCCACTTCT TGAAGATTTGAATCTATCTCCTAAACGACCGACAACCTTATCTTTGGATC GTTCTAGCGTAAAGAGAACTTCACCACCAGTTTCCCCAAAACCTAACCGT GTGGTGTTCTCTAGCAATAAAGTGCTACCACCACCCGCCTCCCCACGCCA ATCTACACCTCCAAAGAAATTGACCCCGCCCATGAAAGTGAACCCACTTG TATCTCCGAAGCCAACTTTCAAGGTGACAACCAAAAAAACACCACCGCCT GTCTCCCTGAAGAACACCCAAGAAACAAGTCCAAACACATCAGGGCCATC TGGTCTACGATCATCTCCACCGCGGAAACCAGGTCTCAGATCGTCAACTC CAGACATCAACTCCAGCTCCTTCCAGACATCTCCAGGGCGCTCTACATCC CCAAAGGTTGGACAAATCTTGGATTCGTTACGAAATTCGGGCAGCGATGA AGACGGATCACCGAGAATTGAAAAATACGTACCaatcaaaattggaaaat attccaaactgTCACCAACAAAAGTACCGAATATTCGACTTGCATCTTCA CCAAGGAAATCACCAAATGGCAATCTTCAATCTCCGGTATCGCCTTCTCC TCGTATCGAAcccaacaacaacaataataaaTTTCTGTATTTGCCAGAGC TAACAGGAACATCAGATCAATCACCAAGATACAACAGTGGTGGCAGTGAA GGTATTGAATATGAATGGGACGGCATGATGGAGAGTTTCCAAGGTAAaac taattttgataaaaaaagagtCAAATAGACTAACTCGCAAAATCCTTTTC TTAAAGAGTCAAAAAGTCCTTCTCTTAAAGAAATTGCTAAATTCACCGGT TAAGCCATAAAATTGGAGTTAATAGTACATaattagactagtaaactagt cggttattacttataataaaactgtcaatcaaataatgtaaacactaatt aaatattcagcgcgcgtgagagaaaaggaaaatactcgactagaagcttc ttccaacGCCTTATtctcttcacctaaaatcgtaaggagagacatacaga tttctctatgtctgacccgtgcgagattgtatttatttttctttctgttt attgcatttttggaaatgctcatttatttataagttcccatgtttaatgt tatatgaaatatcatttagtcaaaaaagttggatggattctcaaaaacct aaaaaaggttgtaaaattaaacaacgtttttcgaggaaagaagcttctag tcgttgaaattcagaaaagagcgTGTCTTTTTCTTTGTcctcacctcttc gattctttttatttggagcttgaattttttgtatatgggtctgttttcaa cgactagtttactagtctagtacATAATGTGCTTTTCGTATGCCTAAATG GTAGCAATTTCCCTTATTCcgatcattttttaaaaatcatttctttGAAT CCCCGAAATTTATACATCCAAATTGACTGCAATAGGCGACTAGGCTGTTT TCTCTCTTAAGGTACCTCACCACTTACTGCAAGTTTCCACGAAATCGATG TTGAACGAATGGTGTCATCAGATGAACCTTCGTCACCATTCGACGAAGAA AGTTTCTCACCAAAGTCTTCAAGTTCACCAGAACCGAGCAGTTCATCTGC AGACCAATATGATTCTTCATCACCAGATGGTCATACATCATTAGATGATG TGGAGGAGAATCAACAAGAAGTGTATCGCATCTACATGTCTAATTCACCC AAAGAAGCTTACAAGATCTCTCCACATTCTCCAGGaccaaataaacaaaa tttgggACACTCCCCCGTTATGCACAAACATCATTTTGAACCCTCCTCCG GAGGGGAACAAGACGATGAAGACACGCAAGCATCGCCTCGAAGGGGGAGA CCTAGCCTTAAAGGTGCTCAATACGTTGATACTTTTAAACGACAACCTCA ACACCAAGTTCGTAGAAAACGGCACAGCGCTAATGCTAAGTAAGGGAGGT AATGCAATCCACATTAAATCTTGCTAAAGATAGTTGAGCTCAACATAGCC GGAGGATACCACAGATTTTCTGGGAATAGGCTCTTCCATAAAATTTTTGT ATATGGGGGATGAGGATATATtagatattttgtccggggagtagtgaaaa atctgcaaaatttgcgtTGTTTTGGGGACAAACTTGCTCTGATTcggggt gattttgaatgtccagggggtcaactgatgcttgtccatgGGGTGAGATT TGTTGTCTGAGgatcaaaattcacaatgtctgGGGgtgaatttccaaaaa atgttacatcctccacccccatattcaaattctttctggaagagcccaat tcgATTTCGGTTTGCATGGTTTACGAACGAATTAGATATTTCATGCAATG TAATTTGGGAAACAATAATTAACTACGCAATTGAAGGAAACAAGGTGATG ACATGGAGAACATTATCGAGATTATTTGGAATGTTGTGGTGGTGATCCAC TTCAAAGTATGTTCTTTGTACCAGTGGGACTGGATTGCTATGGCTAGGGC TTGCGCGTGTACAATAGTtcattagtttttgtttttatatcgTCTTTGTT AACATTACCCTGAAAAGGAGGTTTTTAAATTGTTCAATATCTTATTAATA TTTATTTGTTCAGAATTTTAATGCATAAACTTTGTTcgacttttttagaa aatttaaaaactgaaagtattatttattttattcggaattgaatctATTT GAAGTTTCAAGGGTTTTGTGaagtaaagtctgtctcaatatgaTCTGCAT CAGAATAGGCAATGACTTTGACCGAATTTGCTTGTGCTTGCTGAAAATAT CATAAAGAGTGGAGTATAccaattagaaaaaataaaatgaatttggaaaa atgaagaagaaaaatatcgtCCTTGTGATGAACTGTGCATAATTTCCCAT TTTCACAACAGTAATCCATAACTTATATAATGATCACtgtgaaaaattta ttcaaaaatatgaatttattATCGAACGATATAGTCCAAAGTTTATCACT TTATTCTATTTTTGTTGAATCTTTTCTATTTTCGAAAAGCCCAAAACCTC CATTTCAttcgaattttatcaaaaattacagccttttttgtctctgcTGC AGATAAtatcgagacagactttagtgacCAGAGTTTTTTTTCAGGCCTCG GGTTTTCCAATTTCTTACACTATCTTCAAGTGAGATATTTGATGCCGACA TGCGCCAGAAAATGGGCACTTACCTTAAACTGATTAGATATGAGTTCTTC TTACTTTTAGTGGGATATAATATTTTGTGAAGGATTTGCGCCTTTTAGTT AGAATTTACTGTATTTCCAAATATGTTgttcatcaaatttttattgtatG ATAGTTCATCTCAGTATTTTCTAAATAGTCTAAAATTTCCATGTTGCAAT TAAATCTGGACAGACATTTTGTCCTGAATGGTACAGCGTTTCCTATTtag ggagcggtcataaagtatctactagggggggtatgaggattctagggggg gggggggNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNtccaattttttttgggaaactcaagagaaaatgtaggaagt ctaatttcatagttttacgtttgaagatttcaaaaatttttcggcctTAC GGCCGACAACTAATAATTTATCTTATTGGATATATGTACATTTCAGATTG ccattatttgggcatcatcgccttgcccttttggtttgtaaCATTGAGCT AGGTGAGGGAAGTAGGTTAGTGGCTCTCACAGCccatcagagtggtttga aaaagtacttcttaaaagaaatttgtcaaaacaaagtgtcttttagctta aatggtggtgaaaaatattgaaattttcgcccgtcggcgcaaaccatggt tgcgcctccttagcatCTGCTAATGTCAAAACACCTTAtattcaaattac aaaaagcaaattccaagtttcttgactcaaagattccgggcgttactttc aaccatacTGCTCTTACAgattaatattttcacttaataatggagggcgc aagtaaggacaaaaaataccaggggcgccaatttcatagtttgcatcccc cgaaaattaagccaggtcgctactggggaaaataagccgtatttttttcc aaattttacagaaGCTCAGAGAAAACCACTAGATGATTCTTGTGTTAACC CTGTTATACTTTAATTTAACAGGGCTAAACTATCTCCCTtaccttatttt gacataaaaaactgtcatacaaacaaataatactctCTGTACCGCATCTG NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNgttcgaaatttttttcgagggtttagaaaggggtgcga aattttttttggatttttcaaaatatcctccacccccctctagtagatac tttatgaccgctcccttaCGACATACTGGCGATTTTTTTCCACATTTTTT CTAGACATTTTCTTAAAacgttgaaaaatgaaagaaaacattCTTGACTT TGTTATTTATAAGGGAACCGAGATATTTCGAGAGCTAAATTTACAATTAT CCCCTATTTTGGGCGTTGGATGAATGGGGCACTGACCTGGGtactttttc tttaattttttcattattcagattgtattgggctcttccagaaaaaaatt gaatatcccCATattggaggatataacattttttgaaaatttacccccgg acattgtgactttcgACACCCCGGACAAAAGATGTAACCTTCCGGACAAT CAGTTGACCCCGGACCCCCCGGGCATTCATATTAACCCCTAAACAGAGCA GTTTTGCCCCCTAAACAagacaaattttgtagatttttcaataCCCCCTG GACAAAATATCccccccccccccccatgtacaaaaattttatGTAAGAGC CCATTTTAATAATCATAACAAGTCAGGCCAAAATTTACCTGTTCTAATAA AAGTGAGTTATGTAGACAAGTTTGGTATATCTCGATCGGGGTACGTCTTT CATTCGGGAAACGTATTTTGTAatacacctctgtctcacagcctGGTGTA ATTTCTTCctagtggggatgaaaatttctatgaCAATTATAATGGGGATA TAGATTATATTGTTCTCGAGttaaaaaggttggtttttgagtgcaattat tttccattgaattttaaattcgATTTTCCAATGGGGCTGAAACTGTAGGG TATTTTCCCCACCAGCGACAACATTTTGACCGAATTTTCCAGTGAGCGGG TGTAATAAAAGTTAAGAGTTAAGAGTACAGAGTTAAGCAGCCTGTTGGAC CCCCATTTAGAAGGATTCACTCCGAATTTTCATATTTAAATTATAAATCG AATCATGTTCATGTTCCAATGTATctgttcattttgttttttattcagcT AATGATAATAATGAAAAAAACAGAAGGTGAAAAAATAACTAAAACCCATC ACATATATGTCACACTTCAGGAGCTATTCATGCTTACCAGATTACC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00002282TCONS_00002282Clytia hemisphaericatranscript
TCONS_00002283TCONS_00002283Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00002283-proteinTCONS_00002283-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000019supercontigsc0000019:906495..913540 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.48 2.22 1.27 0.77 1.85 1.85 1.12 1.71 1.08 1.62 1.86 0.94 4.1 4.68 3.63 5.3 2.29 2.53 1.06 1.09 2.15 1.97 2.37 2.77 27.92 27.75 0.63 0.37 1.47 1.27