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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00002256 ID=TCONS_00002256|Name=TCONS_00002256|organism=Clytia hemisphaerica|type=transcript|length=1563bp
GgcatttcaaaagaaaaaattttaaaccagGGTTTTTACACAGACTTTTA
CATAACTAACGTAAAATCTCTTGTGCGAGTGATTGCCTGCATAAATTGTG
ATCATATATATACAATTTCtatgaatataaaaaaataagattaaCTAAAC
ACATAATTTGCTTAAAAGATCTTTACCGCAatcaaaaacatcttcaaatt
cATTTGCCACTTTTTGTGGAGACCAAGATGAAGAATTCAAATCTTTTGTC
AATTTCACATTTTCGATGTAGATATCTGAAATATCTTTGGTCAAGTCACT
GCTGTTGATATTGCGCAAAACAGATTCCTCCGATATCTTCAATCTAATAT
CGGTGCCAGAGATCATGTACTTTTTTGTAATCGACTTTCGACAATAAGAT
AAAATATATCCTTCGGGTAATTGAGGAATTTCTTCCAAGTCTAAAGTACC
AGGTTTGATTCGTAGATTGTGGAAAAAATTATTCTTCAATGCATTAGAAT
GCTCTTTGATGCTTTGCTCGAACAATGGGTCTGACTCATACATTTTAACT
TTCAACCTCAAATCGAGACTTGTTTTCGGGTCGACAATATCGAGGCGTGC
AACCGATTTTTCTGGCCAGCAAAAATAGCCAGGACCCACATCAATATCAT
CAACAAATTGCGAGCTGCCTTCTTTTGGGATGAATTGACCATTTAAATTG
ACGAAAATCTTGTATCGGAAAGTTGAAAGTGGGTTATAGGTGTGGAAAGT
GAAATCATATCGACAAAACTCATCTTCTTTAATCCAACGGTGGTAATTAT
CAAATTGATCTAGAGCTGGGACTTTTTCGCGTTCAAGTCTTCGATAGGCT
AAAACCTCAGATCCATCTTTGATAATATCGATAACTTGGCAAGATCCTTC
TGGAAGTTTAAACAAAGCTTTTCCTAAATGGAACTTCAAAGAAAGTTCAC
CGTATGCTGAACTCATATTCTGCAGTAATACAAGAGCtttttcaaaatca
gttttCAAGTCAGGAATCTCATAAAATGATGTTATCGCTTCAAAACCATC
GCAACCGGTAATGGTACACATATTTCGAATGCCTGGAAAAGAACTTTTTT
CAAGCCACAAATACTGATCAGCCTTTAGACCGATTACGTAACATTTTCGA
TAATCTTTGCTTTCTGCGTCAGCCATGAGACGTGTTAGATTATCTGCGAG
AAATGCTGAAAAGTCATCTGCATGTTTCTTTGTACCTTTGACAAAGATTG
ATCTGGTCTTCGAATCTAGTCTGATAAGTACTTGatatttgatttcaaaa
tattcaagtTTATCGTTGATTGCATGCCAGGCGTTTTTATGGGCTGGTAT
GCGATCTGAATACGTCATGAGGCATGTTTCAACCATGTTCGAGACATCAG
GACGCTTTCTCTTGATCAAGTCGTTCGCTATCTTTTGAGCTTTTTCAAAT
TGGGTTACAATAACTTTAATTGATTCTTCTTTCTTGGTATAATCAATATA
GATTGGTTTGAACTCTTGTTTGTTTTGGTAGATATAACGACTAAGGCAGC
TTGGTACATCTAA Run BLAST on NCBI transcript from alignment at sc0000019:555682..558163+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00002256 ID=TCONS_00002256|Name=TCONS_00002256|organism=Clytia hemisphaerica|type=transcript|length=2482bp|location=Sequence derived from alignment at sc0000019:555682..558163+ (Clytia hemisphaerica)
GgcatttcaaaagaaaaaattttaaaccagGGTTTTTACACAGACTTTTA
CATAACTAACGTAAAATCTCTTGTGCGAGTGATTGCCTGCATAAATTGTG
ATCATATATATACAATTTCtatgaatataaaaaaataagattaaCTAAAC
ACATAATTTGCTTAAAAGATCTTTACCGCAatcaaaaacatcttcaaatt
cATTTGCCACTTTTTGTGGAGACCAAGATGAAGAATTCAAATCTTTTGTC
AATTTCACATTTTCGATGTAGATATCTGAATTATCTTTGGTCAAGTCACT
GCTGTTGATATTGCGCAAAACAGATTCCTCCGATATCTTTTAACTAATAT
CGGTGCCAGAAATCATTATTGTTTCGTAATTGACTTTCGacaataagtaa
tagttatcacacggtacagagtacaatatggggatatatttttcgagttc
agatttttcgtcatattataaaaaatagaaaactctgaacgagaaaaata
tatcccatattgttTGAACGAGTAAGTGTGATAACTGGGTTATCCTGgtt
tatcgtcaacttgaaaaatatcaacaaacttttctcTCTCTCGGTGttgt
cttttttaatgttttgtttttttctcttctaactttttgtttttttctct
ctccTTGAAATCaacacaaaaacattcgaaaaaaatcgaatggccattaa
aaagatcaaaacattctATTCATAATTCTTTTGAAACCTGATGTGCATTa
tgaatgaaaagaaaacattcctGAGCATAAAAGTGTACAGCAAAATgatc
tctcgcttaccagaccccttttCTTGCATTTTGTACAGTACAAAATGAAA
TACAGTatttatgtacgcgtttttagccaatcagactgctcatatttttc
atgttgacaaTAAACTAAAATATATCCTTCGGGTACTTGAGGAATTTCTT
CCTagtcaataaaaagaaaaaagggttTTCACTTTTCACGTTAAATCCTA
TGTGTGAATGCTTGCATCAAAATGTGAATTATATAAACCaaatgtaaatt
aaaaatacatGCATTAAACTCATAATTGTCTCAGAAGATCTTTACcgaaa
tcaaaaacattttcaaattcatttgCCACTTTTTGTGGAGACCAAGATGA
AGAATTTAAATCTTTTGTCAATTTCACATTTTCGATGTAGATATCTGAAA
TATCTTTGGTCAAGTCACTGCTGTTGATATTGCGCAAAACAGATTCCTCC
GATATCTTCAATCTAATATCGGTGCCAGAGATCATGTACTTTTTTGTAAT
CGACTTTCGACAATAAGATAAAATATATCCTTCGGGTAATTGAGGAATTT
CTTCCAAGTCTAAAGTACCAGGTTTGATTCGTAGATTGTGGAAAAAATTA
TTCTTCAATGCATTAGAATGCTCTTTGATGCTTTGCTCGAACAATGGGTC
TGACTCATACATTTTAACTTTCAACCTCAAATCGAGACTTGTTTTCGGGT
CGACAATATCGAGGCGTGCAACCGATTTTTCTGGCCAGCAAAAATAGCCA
GGACCCACATCAATATCATCAACAAATTGCGAGCTGCCTTCTTTTGGGAT
GAATTGACCATTTAAATTGACGAAAATCTTGTATCGGAAAGTTGAAAGTG
GGTTATAGGTGTGGAAAGTGAAATCATATCGACAAAACTCATCTTCTTTA
ATCCAACGGTGGTAATTATCAAATTGATCTAGAGCTGGGACTTTTTCGCG
TTCAAGTCTTCGATAGGCTAAAACCTCAGATCCATCTTTGATAATATCGA
TAACTTGGCAAGATCCTTCTGGAAGTTTAAACAAAGCTTTTCCTAAATGG
AACTTCAAAGAAAGTTCACCGTATGCTGAACTCATATTCTGCAGTAATAC
AAGAGCtttttcaaaatcagttttCAAGTCAGGAATCTCATAAAATGATG
TTATCGCTTCAAAACCATCGCAACCGGTAATGGTACACATATTTCGAATG
CCTGGAAAAGAACTTTTTTCAAGCCACAAATACTGATCAGCCTTTAGACC
GATTACGTAACATTTTCGATAATCTTTGCTTTCTGCGTCAGCCATGAGAC
GTGTTAGATTATCTGCGAGAAATGCTGAAAAGTCATCTGCATGTTTCTTT
GTACCTTTGACAAAGATTGATCTGGTCTTCGAATCTAGTCTGATAAGTAC
TTGatatttgatttcaaaatattcaagtTTATCGTTGATTGCATGCCAGG
CGTTTTTATGGGCTGGTATGCGATCTGAATACGTCATGAGGCATGTTTCA
ACCATGTTCGAGACATCAGGACGCTTTCTCTTGATCAAGTCGTTCGCTAT
CTTTTGAGCTTTTTCAAATTGGGTTACAATAACTTTAATTGATTCTTCTT
TCTTGGTATAATCAATATAGATTGGTTTGAACTCTTGTTTGTTTTGGTAG
ATATAACGACTAAGGCAGCTTGGTACATCTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00002256-exon-sc0000019-1491911889:555682..555939 | TCONS_00002256-exon-sc0000019-1491911889:555682..555939 | Clytia hemisphaerica | exon |
| TCONS_00002256-exon-sc0000019-1510915933:555682..555939 | TCONS_00002256-exon-sc0000019-1510915933:555682..555939 | Clytia hemisphaerica | exon |
| TCONS_00002256-exon-sc0000019-1575043694:555682..555939 | TCONS_00002256-exon-sc0000019-1575043694:555682..555939 | Clytia hemisphaerica | exon |
| TCONS_00002256-exon-sc0000019-1491911889:556859..558163 | TCONS_00002256-exon-sc0000019-1491911889:556859..558163 | Clytia hemisphaerica | exon |
| TCONS_00002256-exon-sc0000019-1510915933:556859..558163 | TCONS_00002256-exon-sc0000019-1510915933:556859..558163 | Clytia hemisphaerica | exon |
| TCONS_00002256-exon-sc0000019-1575043694:556859..558163 | TCONS_00002256-exon-sc0000019-1575043694:556859..558163 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000019 | supercontig | sc0000019:555682..558163 + |
Blast
The following BLAST results are available for this feature:
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