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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00002221 ID=TCONS_00002221|Name=TCONS_00002221|organism=Clytia hemisphaerica|type=transcript|length=1215bp
CAAAGCGTTTTGTTACTGCGCATTGAACTTTGTCCCTGTAAAATATCCTA
CCTCATAAATAATTTGACAGTTGCCTCGTGACTTAATGTTATGATTCCCT
TCATTCAGTACCAGTCCACAAGCTCATCATTTATTCATTTCAACACTCCT
CCTCAGGCCTcttggggataaaaactttcgTGAATGAGCAATGTTCATTT
TGCGCGAACTGTATTACACGTGAAATAGAAACCTTGAAAACCAAAAATGA
TAATCTTTACGCTGACGAGTGAACCCTACCTAGTAAACCTTGATTTTTAG
GAAGAGCAAATGAAAGGACTTTGGATAATATTTAGTTTCTTTCATTGCTC
TTCATTTTGATGATCAAAAATACCAACTACAATACTGTAACTTTATattt
cacacccctgtctcacgtATTACACAGATCAGGTGAAGCTTAACTTCGAC
TGAAAATTggcgaaaaaaaacatttgcgTTTTGAGAAATCATTTTACAAT
ACCTTCCCCCAATTGAGTATGAAAAAGTAGAAGATAGCATTATAAACCCA
TTGCAGAGTGACCTTTCTGATCTGAAACGATGGATTCTGAGTCACTTTTC
GACTTTAGTTGGAACTTTTTATCCTCTGAGGAAAAAAACGAGCGCGACTG
TAAGTAAGTCTTGCATAAATTTTTAGTACATccatgtgtcacagacccag
taaCCCTAGCCCCAcctggaaaatttggctaagatttcgtccctggtggg
aaaaataccctacaatttctaCTCCACTGggaaatagactttaattttat
ccccattcgaaattcaatgtaaaaattgcacttcaaaaccaacCCCATTG
GATTTTATAGCTGAcatcaatagaatttttattccCATTGAAATTTcgat
aaaataattttatccCCGTTGTGggaaaaagctccaccggggttgtgaga
caggggtgttttatctGGGCATATCATTGGCTTTATACGTAATAGGATAA
AAGTATGCGAAGAGGTTTGGTAAAATATTATATAACTGATTATGGCAACA
ATGATATTGTTTCCAGTGGACATTTATTTCACGTAATGTTTAACTGCATA
AATCGATCCAACGGGTGAAATTGATGGCTACTTAGAATCATGAATATTAC
TTTACTTAACTCAGAAATTAATTGCAATCTTTTAAGGTAATTGCATAATC
CACCTGCCAGAAAGC Run BLAST on NCBI transcript from alignment at sc0000018:834879..836093 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00002221 ID=TCONS_00002221|Name=TCONS_00002221|organism=Clytia hemisphaerica|type=transcript|length=1215bp|location=Sequence derived from alignment at sc0000018:834879..836093 (Clytia hemisphaerica)
GCTTTCTGGCAGGTGGATTATGCAATTACCTTAAAAGATTGCAATTAATT
TCTGAGTTAAGTAAAGTAATATTCATGATTCTAAGTAGCCATCAATTTCA
CCCGTTGGATCGATTTATGCAGTTAAACATTACGTGAAATAAATGTCCAC
TGGAAACAATATCATTGTTGCCATAATCAGTTATATAATATTTTACCAAA
CCTCTTCGCATACTTTTATCCTATTACGTATAAAGCCAATGATATGCCCa
gataaaacacccctgtctcacaaccccggtggagctttttccCACAACGG
ggataaaattattttatcgAAATTTCAATGggaataaaaattctattgat
gTCAGCTATAAAATCCAATGGGgttggttttgaagtgcaatttttacatt
gaatttcgaatggggataaaattaaagtctatttccCAGTGGAGtagaaa
ttgtagggtatttttcccaccagggacgaaatcttagccaaattttccag
gTGGGGCTAGGGttactgggtctgtgacacatggATGTACTAAAAATTTA
TGCAAGACTTACTTACAGTCGCGCTCGTTTTTTTCCTCAGAGGATAAAAA
GTTCCAACTAAAGTCGAAAAGTGACTCAGAATCCATCGTTTCAGATCAGA
AAGGTCACTCTGCAATGGGTTTATAATGCTATCTTCTACTTTTTCATACT
CAATTGGGGGAAGGTATTGTAAAATGATTTCTCAAAAcgcaaatgttttt
tttcgccAATTTTCAGTCGAAGTTAAGCTTCACCTGATCTGTGTAATacg
tgagacaggggtgtgaaatATAAAGTTACAGTATTGTAGTTGGTATTTTT
GATCATCAAAATGAAGAGCAATGAAAGAAACTAAATATTATCCAAAGTCC
TTTCATTTGCTCTTCCTAAAAATCAAGGTTTACTAGGTAGGGTTCACTCG
TCAGCGTAAAGATTATCATTTTTGGTTTTCAAGGTTTCTATTTCACGTGT
AATACAGTTCGCGCAAAATGAACATTGCTCATTCAcgaaagtttttatcc
ccaagAGGCCTGAGGAGGAGTGTTGAAATGAATAAATGATGAGCTTGTGG
ACTGGTACTGAATGAAGGGAATCATAACATTAAGTCACGAGGCAACTGTC
AAATTATTTATGAGGTAGGATATTTTACAGGGACAAAGTTCAATGCGCAG
TAACAAAACGCTTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00002221-exon-sc0000018-1491911889:834879..836093 | TCONS_00002221-exon-sc0000018-1491911889:834879..836093 | Clytia hemisphaerica | exon |
| TCONS_00002221-exon-sc0000018-1510915933:834879..836093 | TCONS_00002221-exon-sc0000018-1510915933:834879..836093 | Clytia hemisphaerica | exon |
| TCONS_00002221-exon-sc0000018-1575043694:834879..836093 | TCONS_00002221-exon-sc0000018-1575043694:834879..836093 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000018 | supercontig | sc0000018:834879..836093 . |
Blast
The following BLAST results are available for this feature:
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