TCONS_00002147 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00002147
Unique Name	TCONS_00002147
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2105

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at sc0000018:600947..606993-
coding sequence from alignment at sc0000018:600947..606993-

transcript sequence

>TCONS_00002147 ID=TCONS_00002147|Name=TCONS_00002147|organism=Clytia hemisphaerica|type=transcript|length=2105bp
TGCTAAGGAATAAGAAGTCAAAAAATGGTGAAGGAAAGCAAGGCAATGGA
CCGAATCATATTGACATCAGTGAAAATCAAATGTTTACAAGCACAATTAG
GATGTGATTGGCAAGGTGAACTATCCTCAGTTGAGaaacacgAGGAGAAA
TGTAAATACAAGTCTATCCAATGTTCGAATAAAGGATGTCGTTCAGAAAT
GATGAGAATGAACTTACTAAAACATTTGAATAATTGTCAATATCAAATTG
TTGCATGTGAATTTTGTGCAACTAAAGTACCACAAATTGATATGGAGGAC
CATCGCATAGACTGTGACTTTTGTCCGAAGAAATGTCCAAATGAAAACTG
CCAAGTCAAAATTAGAAATACAGAGCTTGATGCACATTTGGAGCAAGATT
GCCAATATGAGCCAGTGGAATGCAGATATAGCGCATTTGGTTGTGAAGAT
AAGATAAAACGAATCGATATGAAGCTCCACTTGGATGAATCAGTACACGA
TCACATGTCATTACTTTTCAAGAGTAACCAAGACCTTGAGAAATCTCATC
GAGAAACAAAACAGGAGTTAGATGATGCTCAAcaacgattggtcaaaaca
acAATGGTGTTGAAAGAATTCAATGAAATGTTGAATCAAACACGACGAGA
GCTTGAAGCAACAAAACGTGAATTTGCAGCATTCAGAAAGGAGACATCTG
AGAAAATAGCTGAACAAGATGCACAATTGGAGAAATACAAGAATCAACCA
AGAGCTCCTACACCAACCAGAATTGAGCCTCTGAAATCACCACGTGATAG
TCCAGTCTCCAAGAGCCCAAGGCAAAGTCCAGAACCAGGCACCAATATCC
CAATCGGTCGCAAGTCACCAGAGCCTGTTAAGGAGCGAAGAACACCTTCT
CCAACATCAGATGACAAAAAAGGAGGAATCTTAAAGAAAGCGAAATCAGC
TGACAACTTAACAACAGCTGGACGTAGCAGCTCACCTGTcacattgaaat
tattcttaaaGAAATCTGATTCTCCTATTAACGTTACACGTTCAGATTCG
AACGCGTCTTCTAGTTCCTCGTCATCGGCCGGCTCCACCAACCCGCCGCC
TCCTCAAATCGTTTCCAAGAACCCGCTTTCTCCATTGACTCCTTTGTCAC
CAATGTCACCAACAAAGCGCGTCTCTCCTCCACCACCAGGAGCCAAGGAT
TTACCAGACGAGCCAAGAAGCCCACAAAACGGCGAAACCACGTTACAAAG
AAAACGCCAAGCCGCCATTAAGCCTATTATTACACGCCCATCGACGCCAC
TTCAATCGATAATCGACGCGATGAATAATTCACCCATTAATGATTATCCA
CAACATTTCCACGCCATGATGCAGAATATGGAACCAGATCGATTCTACGT
TGTCAACGGTGATCTTCTCATCAAGGTCAATACGTTCGGATCGTTACGTC
CGTACGCTGTCGTTTACGTGCAACCGTGGGAAGAACGTAGCCGTAAAGTC
TTCCAAGAAATGCGTTTAAACAAACGTACAAAACATCACAGCGAACGTGT
CTGTATTGAAGCTAACTCACAAGTTGGAATTGTCAAACTTCTTGTTAATT
GCACTTTGCAAGACACAATCGTATCCGTTGTTTGTACACAACAAAACACA
GCTTTTCTTCCCTCCTATATCGAAACTATGGGATGGGGCTTCCAAGTACC
TGCTGGATTACACAGAAACGCATTTTTCCATCAAGAAAATATGTTGTTGA
GACTCAGACAACGTATTCCAGATGTTGAGAGAATGGCAGCTGGTATGTAA
ATAAACGAACACTTTTTATAATACGAATTTGGGACAAAGTCTTACAATAT
TGTGACTATGGTATTATTTTTTCTCctatgtattttttttaaagaaaaat
gacatttttttattgcatgatttatattttatttttggatttttattttt
taacaaacaatGTGTAAATACTTTTCTTTCTTACCTTTTTACTAATTGCT
GGCAATAATGatgatttttataaatatgattttgaacCGAAGCAGGGTCT
AAGCTAGCAACAGTGTTCTCAAAATacctactcttgtctcccgaatagac
gtccc

Run BLAST on NCBI

protein sequence of TCONS_00002147-protein

>TCONS_00002147-protein ID=TCONS_00002147-protein|Name=TCONS_00002147-protein|organism=Clytia hemisphaerica|type=polypeptide|length=591bp
MVKESKAMDRIILTSVKIKCLQAQLGCDWQGELSSVEKHEEKCKYKSIQC
SNKGCRSEMMRMNLLKHLNNCQYQIVACEFCATKVPQIDMEDHRIDCDFC
PKKCPNENCQVKIRNTELDAHLEQDCQYEPVECRYSAFGCEDKIKRIDMK
LHLDESVHDHMSLLFKSNQDLEKSHRETKQELDDAQQRLVKTTMVLKEFN
EMLNQTRRELEATKREFAAFRKETSEKIAEQDAQLEKYKNQPRAPTPTRI
EPLKSPRDSPVSKSPRQSPEPGTNIPIGRKSPEPVKERRTPSPTSDDKKG
GILKKAKSADNLTTAGRSSSPVTLKLFLKKSDSPINVTRSDSNASSSSSS
SAGSTNPPPPQIVSKNPLSPLTPLSPMSPTKRVSPPPPGAKDLPDEPRSP
QNGETTLQRKRQAAIKPIITRPSTPLQSIIDAMNNSPINDYPQHFHAMMQ
NMEPDRFYVVNGDLLIKVNTFGSLRPYAVVYVQPWEERSRKVFQEMRLNK
RTKHHSERVCIEANSQVGIVKLLVNCTLQDTIVSVVCTQQNTAFLPSYIE
TMGWGFQVPAGLHRNAFFHQENMLLRLRQRIPDVERMAAGM

Run BLAST on NCBI

transcript from alignment at sc0000018:600947..606993-

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00002147 ID=TCONS_00002147|Name=TCONS_00002147|organism=Clytia hemisphaerica|type=transcript|length=6047bp|location=Sequence derived from alignment at sc0000018:600947..606993- (Clytia hemisphaerica)
TGCTAAGGAATAAGAAGTCAAAAAATGGTAACTTGAATTTATTTTTCAGA
GAATTTATAAAAATTGAATTGCTGAGAAAAATTCGTTTTCGTATTAGATT
GGGTTTATAGTTATCGTAGATTTGGGTTTTTAAAACACAGAAAATGAAGA
TGAAATTTCTTGAAATTTTGATAATTCTTTTTGCTCACTGTAGGTGAAGG
AAAGCAAGGCAATGGACCGAATCATATTGACATCAGTGAAAATCAAATGT
TTACAAGCACAATTAGGATGTGATTGGCAAGGTGAACTATCCTCAGTTGA
GGTAAGAAGAACAGACTTTTCAGGGTGTGTCCCCGAAAATGTACTCTATA
ACCAGAGTGTATCTCACGTTTATCGTTTCGTAGTACCTAGTAACTCTACG
GCAATGAATTTTGAAATCAGCCGTAGATATTGGGTCTGTGTACAGACTAC
CGAAAATGATGTAACGAGTCCAACCACTGGAGAATTCTTAATGTGTCTCA
ATGAATTCTACAGACATATTTTTCTATGTCATTTTAGAGAATTGATTTGA
TGAGAAATATGTTTTAGAAAGTCTATGCACTCAAAAGCTTATGGACGAAA
CATTTTTCACCGAACACCTTGATTGTGATTTTAATATTTGATTCGACTAC
ATTGATGCCACGAGAAACTATGCTTAGAATTCCTTTCCCAGTCACAGGTT
AAGTAACTCATAAATGACTAGACTGTCAATATAAGCTAGATAATATTAAC
TAATACATAGCTACTGAAGAAGGTCTCTTGCCGTAAACTCTATTTGATTC
TTCCAGATTCATTCGAAATATACGTCACTATTGACTTGTTGGAAAGATAT
CTATGAGTGGTAAAAGTGACTTCAATGAAATGTCGTTTTTTTTTTAGAAA
CACGAGGAGAAATGTAAATACAAGTCTATCCAATGTTCGAATAAAGGATG
TCGTTCAGAAATGATGAGAATGAACTTACTAAAACATTTGAATAATTGTC
AATATCAAATTGTTGCATGTGAATTTTGTGCAACTAAAGTACCACAAATT
GATATGGAGGTATGGTTGATTCCTTTCTACTATATTTACTGTATTTTTAA
GCATCTCCTCTGCCCATCGGGTACAAGAACAATAGCCCTATGTTTTGAAG
AATCTTAAGTCCAGTCTGGCCAAGAGAAAGTCCTTCGCTCGAGAGGAAAA
AACTGTTGAGTTGAGGGGGATTTTTCCTTGTTTTTGTATGTTTTTTCTTT
GCAACTTGCAAGTCTAGTAGGTTGATGCAAAAGAATATCTTCTTCAAATT
TAAAACAATGCCTAGGAATTCTGATTTTGCTGACGCGTGATAAATAAACG
ATAAATTCAGCTGGGACACCCGGAGAAAGAATTTATGATGATAACAGTCC
AAAATTTAATTTGAAAAACATGAAAAATCTTCATTAAAATACAAAATAAT
TTTCCTGACGAGTGATTAGCACACTAATGTTTAATTAACAGTTGTAAAAA
GAGAGTACAATGGAAAAAGCAGATTAACTTAATTAAATACCTAATTATAT
GTGGGCGACTGTTTAAGGGAATAATATCATATTTCTCGGCTGTTTTATTA
AAGCTGTATCTAGCTGTCTTCTATTGTATTTCATTTGATTACATAAGCTA
ATTTCCTGGACAAGTGATTTTTCGATGACGAGTCATATTATTGTATTTGT
ACAAAACGACTCATTAATTAATTTGTTGATATTTGCTTTCTTGAGATTTA
TAGTTCCTGTAACTAACCAGGGTTTCTTAGTGTTACTGATCTTTAATATT
ATACATGGCGCGTCTCGTAAGCTTCAATCTTAATCCCCAATATTGTAAAC
TTCCTTGATATAAAGTCTCATCAAATGAGATTTCTAAAGTCTACCTGTGA
TTTCGTCTGTTACACGTTTTTTTAGAAAGAACATTTTTGAAGCCTTCGGA
TTTTCTGAACTTTTTGAGTTTTAAGCCTAAAAATGTTCTTAAGATATGTT
CTTAAGATGTTCTTATTAAATTGACCATTTTGTGAATATCTTTTACCATA
TTGCTAAGAAATTTTTTTGAGTCCACAAAGCCTTAAAATGATCTTAACTT
GTTCTTAACATAAGCCTTATGTTCTTACATAGTTTGTTCTTACAAAAAAA
CGTTCGTATTGCTTGCATTGTATGTGATTTTAAAGTGTTTTGAAAGAATA
CTTATCATAAGGAAAGTTACTGCCATTACAGCATTCGAAAACCCTAGTTT
ATGAAACTGTCTAGTGTATTGACAGCTACGCCCAAGTTTCAAATCACAAA
TCATACAAATAATTTTTCACAGTTGAAGAATTTTTCAAAATTTCAAATGT
TGAATTCTAACTTTTATTCTTTTTAGGACCATCGCATAGACTGTGACTTT
TGTCCGAAGAAATGTCCAAATGAAAACTGCCAAGTCAAAATTAGAAATAC
AGAGGTAGTTATTGATGATGTATTTCTATAACAACAGCAATACTTTTAAT
TGTTTTTCAGAATAATTATGATAGCTGGCATACCTTGGTTTAAATGCCCA
AAATAAATAAAGGGCAATATTGTGCTGTCTATTCTTGGCACTATTAAGTA
TTGTAAAGAAATTTGAGGCATTTTAACAAAGAGCATCTCTACTACATTTG
GTCTTTGTTATTAAGAGCTGATGTGGCCATTGAGTGGTGAGAGCTGCTAG
CATCGAAAAAAGGTAATTTTATTACGTTTTTGTTTTTCTTTAACATAGCT
TGATGCACATTTGGAGCAAGATTGCCAATATGAGCCAGTGGAATGCAGAT
ATAGCGCATTTGGTTGTGAAGATAAGGTAAATTGAAATAATACGTTTAGT
AGATCCTCTTCCTCGCGCGAGGGGGTCTATCTAACAAATCCTGCATTACT
AAAAATAGACAAATTTCATAAAGAAGGACAAACAAGAACGACAAATTTCA
TAGTTTGCCGTCTACAACCCCGACCAAAAGTGGCTGTACCACCCCTACAG
ATTCTTCTTTGTTTATCACTGGAATTAACTACATGTGGTTTAAAAGAACG
ACAATTTACGCATGCGTGTTATTCATGCAGGAATTACAAGACGAACCTAC
TGACGTACATGATAGTGACATTTTAATACTCAGTTTGAACTGACCAATAA
CAAACTTGGAATTAAATTAACTTAACTAAAGAAGAGAAATTTAAAATTCA
TTAAGGTTAAATTCTACAACAAATCGGGAACATTTTTGGCTCGTTTTTTT
CAAATCACCCTTAACTTTAAAATCCCGCCGATGAAAATGCCAAAACTTAG
ATTCCTTAAAAATCTGTATAAACACAGGCAAGTCAAATGCAATTGAAGTG
TATTAGTAGTCGCCAGTGGAATTTAAACTACAGTAGGTCATTGCCATCGG
AGACGGTTGTGTGCATACATATCAATATTAACTTTTCCTAGTAACCCACT
GGTTACCTTTTAACAAAAAGGAAAATGAAAATGAAGGAGAAATCTCATTA
TTATAGTCTTAAAACCTGGTTTTTAGACAACTTCCTTATGTGTGTTTAGA
ATAGTCTAATCTGGATTTAAGCTTAAAACAACCGGCCGTCGAATGGATGT
TGAAAAGACGACGAAAGAGGATGTGTTAATATAAGACTGAAAACAATGTG
AAACATTGGAAATGAACTCTTTAATCTATATATCTTTATTTCTTGACCTG
CTTATATAATTACAAAATAGATGTAATTAAGTACAGATCAAAAATATATT
GTATTGTCAAACAACACCGTACTGTTGTCAACGGTTTCCAAGGCTAAACT
AATTGATCAAATTGATTCGAAAAGGAAATTATTTTGTCGCATCTATTCTC
TTTCATTCAATGAAAACAAGTTATATAGAAGATTTCGTGTTTACTGTTTC
AATCTAAGGAATTTCAGCTTATCCTTTCCCCATAATCCCTTGAAAAAAAA
CTATAAAGCAAGATACAATACTTAATTTCCAATCAGTTGATTTTGTAACC
TAATTGCATTAATTTGACACAGTAAGAATATAACTTCATTTTTACAGAGG
TATGATAGAAATAGTTTATGGGGCAATTTAATTTGTTTTCTTTTTTTTTT
GTTGACGATGTATAAATTTCTTAATTAGCAGGATGACTAAATGAAGAGAA
AGACAATTTTGAAATTTTCTGTCATGAAAACAATTTTCTCAAATTAGAAA
AAAAGCTGAGTGGGGTTTGTGGTATACAGCTTTAGAAACCTTCTTTGATC
GACGTTTTCTGGAAAACAGTTAGTGGAAATTCTAGCGATACTTCGTTCAA
GTTAAACAAAGTGCTTTCTTCGTGTGTGATTATAATCAACTTTGAATAGC
AATTCAGATAGCAATTTTTTAAATATTTTTCTTGTTCTACTACAGATAAA
ACGAATCGATATGAAGCTCCACTTGGATGAATCAGTACACGATCACATGT
CATTACTTTTCAAGAGTAACCAAGACCTTGAGAAATCTCATCGAGAAACA
AAACAGGAGTTAGATGATGCTCAACAACGATTGGTCAAAACAACAATGGT
GTTGAAAGAATTCAATGAAATGTTGAATCAAACACGACGAGAGCTTGAAG
CAACAAAACGTGAATTTGCAGCATTCAGAAAGGAGACATCTGAGAAAATA
GCTGAACAAGATGCACAATTGGAGAAATACAAGAATCAACCAAGAGCTCC
TACACCAACCAGAATTGAGCCTCTGAAATCACCACGTGATAGTCCAGTCT
CCAAGAGCCCAAGGCAAAGTCCAGAACCAGGCACCAATATCCCAATCGGT
CGCAAGTCACCAGAGCCTGTTAAGGAGCGAAGAACACCTTCTCCAACATC
AGATGACAAAAAAGGAGGAATCTTAAAGAAAGCGAAATCAGCTGACAACT
TAACAACAGCTGGACGTAGCAGCTCACCTGTCACATTGAAATTATTCTTA
AAGAAATCTGATTCTCCTATTAACGTTACACGTTCAGATTCGAACGCGTC
TTCTAGTTCCTCGTCATCGGCCGGCTCCACCAACCCGCCGCCTCCTCAAA
TCGTTTCCAAGAACCCGCTTTCTCCATTGACTCCTTTGTCACCAATGTCA
CCAACAAAGCGCGTCTCTCCTCCACCACCAGGAGCCAAGGATTTACCAGA
CGAGCCAAGAAGCCCACAAAACGGCGAAACCACGTTACAAAGAAAACGCC
AAGCCGCCATTAAGCCTATTATTACACGCCCATCGACGCCACTTCAATCG
ATAATCGACGCGATGAATAATTCACCCATTAATGATTATCCACAACATTT
CCACGCCATGATGCAGAATATGGAACCAGATCGATTCTACGTTGTCAACG
GTGATCTTCTCATCAAGGTCAATACGTTCGGATCGTTACGTCCGTACGCT
GTCGTTTACGTGCAACCGTGGGAAGAACGTAGCCGTAAAGTCTTCCAAGA
AATGCGTTTAAACAAACGTACAAAACATCACAGCGAACGTGTCTGTATTG
AAGCTAACTCACAAGTTGGAATTGTCAAACTTCTTGTTAATTGCACTTTG
CAAGACACAATCGTATCCGTTGTTTGTACACAACAAAACACAGCTTTTCT
TCCCTCCTATATCGAAACTATGGGATGGGGCTTCCAAGTACCTGCTGGAT
TACACAGAAACGCATTTTTCCATCAAGAAAATATGTTGTTGAGACTCAGA
CAACGTATTCCAGATGTTGAGAGAATGGCAGCTGGTATGTAAATAAACGA
ACACTTTTTATAATACGAATTTGGGACAAAGTCTTACAATATTGTGACTA
TGGTATTATTTTTTCTCCTATGTATTTTTTTTAAAGAAAAATGACATTTT
TTTATTGCATGATTTATATTTTATTTTTGGATTTTTATTTTTTAACAAAC
AATGTGTAAATACTTTTCTTTCTTACCTTTTTACTAATTGCTGGCAATAA
TGATGATTTTTATAAATATGATTTTGAACCGAAGCAGGGTCTAAGCTAGC
AACAGTGTTCTCAAAATACCTACTCTTGTCTCCCGAATAGACGTCCC

Coding sequence (CDS) from alignment at sc0000018:600947..606993-

>TCONS_00002147 ID=TCONS_00002147|Name=TCONS_00002147|organism=Clytia hemisphaerica|type=CDS|length=10656bp|location=Sequence derived from alignment at sc0000018:600947..606993- (Clytia hemisphaerica)
ATAAAACGAATCGATATGAAGCTCCACTTGGATGAATCAGTACACGATCA
CATGTCATTACTTTTCAAGAGTAACCAAGACCTTGAGAAATCTCATCGAG
AAACAAAACAGGAGTTAGATGATGCTCAACAACGATTGGTCAAAACAACA
ATGGTGTTGAAAGAATTCAATGAAATGTTGAATCAAACACGACGAGAGCT
TGAAGCAACAAAACGTGAATTTGCAGCATTCAGAAAGGAGACATCTGAGA
AAATAGCTGAACAAGATGCACAATTGGAGAAATACAAGAATCAACCAAGA
GCTCCTACACCAACCAGAATTGAGCCTCTGAAATCACCACGTGATAGTCC
AGTCTCCAAGAGCCCAAGGCAAAGTCCAGAACCAGGCACCAATATCCCAA
TCGGTCGCAAGTCACCAGAGCCTGTTAAGGAGCGAAGAACACCTTCTCCA
ACATCAGATGACAAAAAAGGAGGAATCTTAAAGAAAGCGAAATCAGCTGA
CAACTTAACAACAGCTGGACGTAGCAGCTCACCTGTCACATTGAAATTAT
TCTTAAAGAAATCTGATTCTCCTATTAACGTTACACGTTCAGATTCGAAC
GCGTCTTCTAGTTCCTCGTCATCGGCCGGCTCCACCAACCCGCCGCCTCC
TCAAATCGTTTCCAAGAACCCGCTTTCTCCATTGACTCCTTTGTCACCAA
TGTCACCAACAAAGCGCGTCTCTCCTCCACCACCAGGAGCCAAGGATTTA
CCAGACGAGCCAAGAAGCCCACAAAACGGCGAAACCACGTTACAAAGAAA
ACGCCAAGCCGCCATTAAGCCTATTATTACACGCCCATCGACGCCACTTC
AATCGATAATCGACGCGATGAATAATTCACCCATTAATGATTATCCACAA
CATTTCCACGCCATGATGCAGAATATGGAACCAGATCGATTCTACGTTGT
CAACGGTGATCTTCTCATCAAGGTCAATACGTTCGGATCGTTACGTCCGT
ACGCTGTCGTTTACGTGCAACCGTGGGAAGAACGTAGCCGTAAAGTCTTC
CAAGAAATGCGTTTAAACAAACGTACAAAACATCACAGCGAACGTGTCTG
TATTGAAGCTAACTCACAAGTTGGAATTGTCAAACTTCTTGTTAATTGCA
CTTTGCAAGACACAATCGTATCCGTTGTTTGTACACAACAAAACACAGCT
TTTCTTCCCTCCTATATCGAAACTATGGGATGGGGCTTCCAAGTACCTGC
TGGATTACACAGAAACGCATTTTTCCATCAAGAAAATATGTTGTTGAGAC
TCAGACAACGTATTCCAGATGTTGAGAGAATGGCAGCTGGTATGTAACTT
GATGCACATTTGGAGCAAGATTGCCAATATGAGCCAGTGGAATGCAGATA
TAGCGCATTTGGTTGTGAAGATAAGGACCATCGCATAGACTGTGACTTTT
GTCCGAAGAAATGTCCAAATGAAAACTGCCAAGTCAAAATTAGAAATACA
GAGAAACACGAGGAGAAATGTAAATACAAGTCTATCCAATGTTCGAATAA
AGGATGTCGTTCAGAAATGATGAGAATGAACTTACTAAAACATTTGAATA
ATTGTCAATATCAAATTGTTGCATGTGAATTTTGTGCAACTAAAGTACCA
CAAATTGATATGGAGGTGAAGGAAAGCAAGGCAATGGACCGAATCATATT
GACATCAGTGAAAATCAAATGTTTACAAGCACAATTAGGATGTGATTGGC
AAGGTGAACTATCCTCAGTTGAGATGATAAAACGAATCGATATGAAGCTC
CACTTGGATGAATCAGTACACGATCACATGTCATTACTTTTCAAGAGTAA
CCAAGACCTTGAGAAATCTCATCGAGAAACAAAACAGGAGTTAGATGATG
CTCAACAACGATTGGTCAAAACAACAATGGTGTTGAAAGAATTCAATGAA
ATGTTGAATCAAACACGACGAGAGCTTGAAGCAACAAAACGTGAATTTGC
AGCATTCAGAAAGGAGACATCTGAGAAAATAGCTGAACAAGATGCACAAT
TGGAGAAATACAAGAATCAACCAAGAGCTCCTACACCAACCAGAATTGAG
CCTCTGAAATCACCACGTGATAGTCCAGTCTCCAAGAGCCCAAGGCAAAG
TCCAGAACCAGGCACCAATATCCCAATCGGTCGCAAGTCACCAGAGCCTG
TTAAGGAGCGAAGAACACCTTCTCCAACATCAGATGACAAAAAAGGAGGA
ATCTTAAAGAAAGCGAAATCAGCTGACAACTTAACAACAGCTGGACGTAG
CAGCTCACCTGTCACATTGAAATTATTCTTAAAGAAATCTGATTCTCCTA
TTAACGTTACACGTTCAGATTCGAACGCGTCTTCTAGTTCCTCGTCATCG
GCCGGCTCCACCAACCCGCCGCCTCCTCAAATCGTTTCCAAGAACCCGCT
TTCTCCATTGACTCCTTTGTCACCAATGTCACCAACAAAGCGCGTCTCTC
CTCCACCACCAGGAGCCAAGGATTTACCAGACGAGCCAAGAAGCCCACAA
AACGGCGAAACCACGTTACAAAGAAAACGCCAAGCCGCCATTAAGCCTAT
TATTACACGCCCATCGACGCCACTTCAATCGATAATCGACGCGATGAATA
ATTCACCCATTAATGATTATCCACAACATTTCCACGCCATGATGCAGAAT
ATGGAACCAGATCGATTCTACGTTGTCAACGGTGATCTTCTCATCAAGGT
CAATACGTTCGGATCGTTACGTCCGTACGCTGTCGTTTACGTGCAACCGT
GGGAAGAACGTAGCCGTAAAGTCTTCCAAGAAATGCGTTTAAACAAACGT
ACAAAACATCACAGCGAACGTGTCTGTATTGAAGCTAACTCACAAGTTGG
AATTGTCAAACTTCTTGTTAATTGCACTTTGCAAGACACAATCGTATCCG
TTGTTTGTACACAACAAAACACAGCTTTTCTTCCCTCCTATATCGAAACT
ATGGGATGGGGCTTCCAAGTACCTGCTGGATTACACAGAAACGCATTTTT
CCATCAAGAAAATATGTTGTTGAGACTCAGACAACGTATTCCAGATGTTG
AGAGAATGGCAGCTGGTATGTAACTTGATGCACATTTGGAGCAAGATTGC
CAATATGAGCCAGTGGAATGCAGATATAGCGCATTTGGTTGTGAAGATAA
GGACCATCGCATAGACTGTGACTTTTGTCCGAAGAAATGTCCAAATGAAA
ACTGCCAAGTCAAAATTAGAAATACAGAGAAACACGAGGAGAAATGTAAA
TACAAGTCTATCCAATGTTCGAATAAAGGATGTCGTTCAGAAATGATGAG
AATGAACTTACTAAAACATTTGAATAATTGTCAATATCAAATTGTTGCAT
GTGAATTTTGTGCAACTAAAGTACCACAAATTGATATGGAGGTGAAGGAA
AGCAAGGCAATGGACCGAATCATATTGACATCAGTGAAAATCAAATGTTT
ACAAGCACAATTAGGATGTGATTGGCAAGGTGAACTATCCTCAGTTGAGA
TGATAAAACGAATCGATATGAAGCTCCACTTGGATGAATCAGTACACGAT
CACATGTCATTACTTTTCAAGAGTAACCAAGACCTTGAGAAATCTCATCG
AGAAACAAAACAGGAGTTAGATGATGCTCAACAACGATTGGTCAAAACAA
CAATGGTGTTGAAAGAATTCAATGAAATGTTGAATCAAACACGACGAGAG
CTTGAAGCAACAAAACGTGAATTTGCAGCATTCAGAAAGGAGACATCTGA
GAAAATAGCTGAACAAGATGCACAATTGGAGAAATACAAGAATCAACCAA
GAGCTCCTACACCAACCAGAATTGAGCCTCTGAAATCACCACGTGATAGT
CCAGTCTCCAAGAGCCCAAGGCAAAGTCCAGAACCAGGCACCAATATCCC
AATCGGTCGCAAGTCACCAGAGCCTGTTAAGGAGCGAAGAACACCTTCTC
CAACATCAGATGACAAAAAAGGAGGAATCTTAAAGAAAGCGAAATCAGCT
GACAACTTAACAACAGCTGGACGTAGCAGCTCACCTGTCACATTGAAATT
ATTCTTAAAGAAATCTGATTCTCCTATTAACGTTACACGTTCAGATTCGA
ACGCGTCTTCTAGTTCCTCGTCATCGGCCGGCTCCACCAACCCGCCGCCT
CCTCAAATCGTTTCCAAGAACCCGCTTTCTCCATTGACTCCTTTGTCACC
AATGTCACCAACAAAGCGCGTCTCTCCTCCACCACCAGGAGCCAAGGATT
TACCAGACGAGCCAAGAAGCCCACAAAACGGCGAAACCACGTTACAAAGA
AAACGCCAAGCCGCCATTAAGCCTATTATTACACGCCCATCGACGCCACT
TCAATCGATAATCGACGCGATGAATAATTCACCCATTAATGATTATCCAC
AACATTTCCACGCCATGATGCAGAATATGGAACCAGATCGATTCTACGTT
GTCAACGGTGATCTTCTCATCAAGGTCAATACGTTCGGATCGTTACGTCC
GTACGCTGTCGTTTACGTGCAACCGTGGGAAGAACGTAGCCGTAAAGTCT
TCCAAGAAATGCGTTTAAACAAACGTACAAAACATCACAGCGAACGTGTC
TGTATTGAAGCTAACTCACAAGTTGGAATTGTCAAACTTCTTGTTAATTG
CACTTTGCAAGACACAATCGTATCCGTTGTTTGTACACAACAAAACACAG
CTTTTCTTCCCTCCTATATCGAAACTATGGGATGGGGCTTCCAAGTACCT
GCTGGATTACACAGAAACGCATTTTTCCATCAAGAAAATATGTTGTTGAG
ACTCAGACAACGTATTCCAGATGTTGAGAGAATGGCAGCTGGTATGTAAC
TTGATGCACATTTGGAGCAAGATTGCCAATATGAGCCAGTGGAATGCAGA
TATAGCGCATTTGGTTGTGAAGATAAGGACCATCGCATAGACTGTGACTT
TTGTCCGAAGAAATGTCCAAATGAAAACTGCCAAGTCAAAATTAGAAATA
CAGAGAAACACGAGGAGAAATGTAAATACAAGTCTATCCAATGTTCGAAT
AAAGGATGTCGTTCAGAAATGATGAGAATGAACTTACTAAAACATTTGAA
TAATTGTCAATATCAAATTGTTGCATGTGAATTTTGTGCAACTAAAGTAC
CACAAATTGATATGGAGGTGAAGGAAAGCAAGGCAATGGACCGAATCATA
TTGACATCAGTGAAAATCAAATGTTTACAAGCACAATTAGGATGTGATTG
GCAAGGTGAACTATCCTCAGTTGAGATGATAAAACGAATCGATATGAAGC
TCCACTTGGATGAATCAGTACACGATCACATGTCATTACTTTTCAAGAGT
AACCAAGACCTTGAGAAATCTCATCGAGAAACAAAACAGGAGTTAGATGA
TGCTCAACAACGATTGGTCAAAACAACAATGGTGTTGAAAGAATTCAATG
AAATGTTGAATCAAACACGACGAGAGCTTGAAGCAACAAAACGTGAATTT
GCAGCATTCAGAAAGGAGACATCTGAGAAAATAGCTGAACAAGATGCACA
ATTGGAGAAATACAAGAATCAACCAAGAGCTCCTACACCAACCAGAATTG
AGCCTCTGAAATCACCACGTGATAGTCCAGTCTCCAAGAGCCCAAGGCAA
AGTCCAGAACCAGGCACCAATATCCCAATCGGTCGCAAGTCACCAGAGCC
TGTTAAGGAGCGAAGAACACCTTCTCCAACATCAGATGACAAAAAAGGAG
GAATCTTAAAGAAAGCGAAATCAGCTGACAACTTAACAACAGCTGGACGT
AGCAGCTCACCTGTCACATTGAAATTATTCTTAAAGAAATCTGATTCTCC
TATTAACGTTACACGTTCAGATTCGAACGCGTCTTCTAGTTCCTCGTCAT
CGGCCGGCTCCACCAACCCGCCGCCTCCTCAAATCGTTTCCAAGAACCCG
CTTTCTCCATTGACTCCTTTGTCACCAATGTCACCAACAAAGCGCGTCTC
TCCTCCACCACCAGGAGCCAAGGATTTACCAGACGAGCCAAGAAGCCCAC
AAAACGGCGAAACCACGTTACAAAGAAAACGCCAAGCCGCCATTAAGCCT
ATTATTACACGCCCATCGACGCCACTTCAATCGATAATCGACGCGATGAA
TAATTCACCCATTAATGATTATCCACAACATTTCCACGCCATGATGCAGA
ATATGGAACCAGATCGATTCTACGTTGTCAACGGTGATCTTCTCATCAAG
GTCAATACGTTCGGATCGTTACGTCCGTACGCTGTCGTTTACGTGCAACC
GTGGGAAGAACGTAGCCGTAAAGTCTTCCAAGAAATGCGTTTAAACAAAC
GTACAAAACATCACAGCGAACGTGTCTGTATTGAAGCTAACTCACAAGTT
GGAATTGTCAAACTTCTTGTTAATTGCACTTTGCAAGACACAATCGTATC
CGTTGTTTGTACACAACAAAACACAGCTTTTCTTCCCTCCTATATCGAAA
CTATGGGATGGGGCTTCCAAGTACCTGCTGGATTACACAGAAACGCATTT
TTCCATCAAGAAAATATGTTGTTGAGACTCAGACAACGTATTCCAGATGT
TGAGAGAATGGCAGCTGGTATGTAACTTGATGCACATTTGGAGCAAGATT
GCCAATATGAGCCAGTGGAATGCAGATATAGCGCATTTGGTTGTGAAGAT
AAGGACCATCGCATAGACTGTGACTTTTGTCCGAAGAAATGTCCAAATGA
AAACTGCCAAGTCAAAATTAGAAATACAGAGAAACACGAGGAGAAATGTA
AATACAAGTCTATCCAATGTTCGAATAAAGGATGTCGTTCAGAAATGATG
AGAATGAACTTACTAAAACATTTGAATAATTGTCAATATCAAATTGTTGC
ATGTGAATTTTGTGCAACTAAAGTACCACAAATTGATATGGAGGTGAAGG
AAAGCAAGGCAATGGACCGAATCATATTGACATCAGTGAAAATCAAATGT
TTACAAGCACAATTAGGATGTGATTGGCAAGGTGAACTATCCTCAGTTGA
GATGATAAAACGAATCGATATGAAGCTCCACTTGGATGAATCAGTACACG
ATCACATGTCATTACTTTTCAAGAGTAACCAAGACCTTGAGAAATCTCAT
CGAGAAACAAAACAGGAGTTAGATGATGCTCAACAACGATTGGTCAAAAC
AACAATGGTGTTGAAAGAATTCAATGAAATGTTGAATCAAACACGACGAG
AGCTTGAAGCAACAAAACGTGAATTTGCAGCATTCAGAAAGGAGACATCT
GAGAAAATAGCTGAACAAGATGCACAATTGGAGAAATACAAGAATCAACC
AAGAGCTCCTACACCAACCAGAATTGAGCCTCTGAAATCACCACGTGATA
GTCCAGTCTCCAAGAGCCCAAGGCAAAGTCCAGAACCAGGCACCAATATC
CCAATCGGTCGCAAGTCACCAGAGCCTGTTAAGGAGCGAAGAACACCTTC
TCCAACATCAGATGACAAAAAAGGAGGAATCTTAAAGAAAGCGAAATCAG
CTGACAACTTAACAACAGCTGGACGTAGCAGCTCACCTGTCACATTGAAA
TTATTCTTAAAGAAATCTGATTCTCCTATTAACGTTACACGTTCAGATTC
GAACGCGTCTTCTAGTTCCTCGTCATCGGCCGGCTCCACCAACCCGCCGC
CTCCTCAAATCGTTTCCAAGAACCCGCTTTCTCCATTGACTCCTTTGTCA
CCAATGTCACCAACAAAGCGCGTCTCTCCTCCACCACCAGGAGCCAAGGA
TTTACCAGACGAGCCAAGAAGCCCACAAAACGGCGAAACCACGTTACAAA
GAAAACGCCAAGCCGCCATTAAGCCTATTATTACACGCCCATCGACGCCA
CTTCAATCGATAATCGACGCGATGAATAATTCACCCATTAATGATTATCC
ACAACATTTCCACGCCATGATGCAGAATATGGAACCAGATCGATTCTACG
TTGTCAACGGTGATCTTCTCATCAAGGTCAATACGTTCGGATCGTTACGT
CCGTACGCTGTCGTTTACGTGCAACCGTGGGAAGAACGTAGCCGTAAAGT
CTTCCAAGAAATGCGTTTAAACAAACGTACAAAACATCACAGCGAACGTG
TCTGTATTGAAGCTAACTCACAAGTTGGAATTGTCAAACTTCTTGTTAAT
TGCACTTTGCAAGACACAATCGTATCCGTTGTTTGTACACAACAAAACAC
AGCTTTTCTTCCCTCCTATATCGAAACTATGGGATGGGGCTTCCAAGTAC
CTGCTGGATTACACAGAAACGCATTTTTCCATCAAGAAAATATGTTGTTG
AGACTCAGACAACGTATTCCAGATGTTGAGAGAATGGCAGCTGGTATGTA
ACTTGATGCACATTTGGAGCAAGATTGCCAATATGAGCCAGTGGAATGCA
GATATAGCGCATTTGGTTGTGAAGATAAGGACCATCGCATAGACTGTGAC
TTTTGTCCGAAGAAATGTCCAAATGAAAACTGCCAAGTCAAAATTAGAAA
TACAGAGAAACACGAGGAGAAATGTAAATACAAGTCTATCCAATGTTCGA
ATAAAGGATGTCGTTCAGAAATGATGAGAATGAACTTACTAAAACATTTG
AATAATTGTCAATATCAAATTGTTGCATGTGAATTTTGTGCAACTAAAGT
ACCACAAATTGATATGGAGGTGAAGGAAAGCAAGGCAATGGACCGAATCA
TATTGACATCAGTGAAAATCAAATGTTTACAAGCACAATTAGGATGTGAT
TGGCAAGGTGAACTATCCTCAGTTGAGATGATAAAACGAATCGATATGAA
GCTCCACTTGGATGAATCAGTACACGATCACATGTCATTACTTTTCAAGA
GTAACCAAGACCTTGAGAAATCTCATCGAGAAACAAAACAGGAGTTAGAT
GATGCTCAACAACGATTGGTCAAAACAACAATGGTGTTGAAAGAATTCAA
TGAAATGTTGAATCAAACACGACGAGAGCTTGAAGCAACAAAACGTGAAT
TTGCAGCATTCAGAAAGGAGACATCTGAGAAAATAGCTGAACAAGATGCA
CAATTGGAGAAATACAAGAATCAACCAAGAGCTCCTACACCAACCAGAAT
TGAGCCTCTGAAATCACCACGTGATAGTCCAGTCTCCAAGAGCCCAAGGC
AAAGTCCAGAACCAGGCACCAATATCCCAATCGGTCGCAAGTCACCAGAG
CCTGTTAAGGAGCGAAGAACACCTTCTCCAACATCAGATGACAAAAAAGG
AGGAATCTTAAAGAAAGCGAAATCAGCTGACAACTTAACAACAGCTGGAC
GTAGCAGCTCACCTGTCACATTGAAATTATTCTTAAAGAAATCTGATTCT
CCTATTAACGTTACACGTTCAGATTCGAACGCGTCTTCTAGTTCCTCGTC
ATCGGCCGGCTCCACCAACCCGCCGCCTCCTCAAATCGTTTCCAAGAACC
CGCTTTCTCCATTGACTCCTTTGTCACCAATGTCACCAACAAAGCGCGTC
TCTCCTCCACCACCAGGAGCCAAGGATTTACCAGACGAGCCAAGAAGCCC
ACAAAACGGCGAAACCACGTTACAAAGAAAACGCCAAGCCGCCATTAAGC
CTATTATTACACGCCCATCGACGCCACTTCAATCGATAATCGACGCGATG
AATAATTCACCCATTAATGATTATCCACAACATTTCCACGCCATGATGCA
GAATATGGAACCAGATCGATTCTACGTTGTCAACGGTGATCTTCTCATCA
AGGTCAATACGTTCGGATCGTTACGTCCGTACGCTGTCGTTTACGTGCAA
CCGTGGGAAGAACGTAGCCGTAAAGTCTTCCAAGAAATGCGTTTAAACAA
ACGTACAAAACATCACAGCGAACGTGTCTGTATTGAAGCTAACTCACAAG
TTGGAATTGTCAAACTTCTTGTTAATTGCACTTTGCAAGACACAATCGTA
TCCGTTGTTTGTACACAACAAAACACAGCTTTTCTTCCCTCCTATATCGA
AACTATGGGATGGGGCTTCCAAGTACCTGCTGGATTACACAGAAACGCAT
TTTTCCATCAAGAAAATATGTTGTTGAGACTCAGACAACGTATTCCAGAT
GTTGAGAGAATGGCAGCTGGTATGTAACTTGATGCACATTTGGAGCAAGA
TTGCCAATATGAGCCAGTGGAATGCAGATATAGCGCATTTGGTTGTGAAG
ATAAGGACCATCGCATAGACTGTGACTTTTGTCCGAAGAAATGTCCAAAT
GAAAACTGCCAAGTCAAAATTAGAAATACAGAGAAACACGAGGAGAAATG
TAAATACAAGTCTATCCAATGTTCGAATAAAGGATGTCGTTCAGAAATGA
TGAGAATGAACTTACTAAAACATTTGAATAATTGTCAATATCAAATTGTT
GCATGTGAATTTTGTGCAACTAAAGTACCACAAATTGATATGGAGGTGAA
GGAAAGCAAGGCAATGGACCGAATCATATTGACATCAGTGAAAATCAAAT
GTTTACAAGCACAATTAGGATGTGATTGGCAAGGTGAACTATCCTCAGTT
GAGATG

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_001120	XLOC_001120	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00002147-protein	TCONS_00002147-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000018	supercontig	sc0000018:600947..606993 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.018247	0.0423731	0.0414555	5.07204	3.70889	10.2243	14.887	24.961	22.5197	13.4599	29.5474	64.0155	43.7475	56.5262	36.6932	3.93314	24.5768	0.914993	1.08236	0.651302	0.9001	0.107273	0.117033	0.100451	0.304809	0.0769731	0.0273826	0.0207687	0

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR013083	Znf_RING/FYVE/PHD
IPR001293	Znf_TRAF
IPR008974	TRAF-like

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding
GO:0005515	protein binding

GO Annotation

GO Assignments

This transcript is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00002147 vs. Swiss-Prot (Human)

BLAST of TCONS_00002147 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

You are here

TCONS_00002147 (transcript) - C. hemisphaerica