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TCONS_00002075 (transcript) - C. hemisphaerica

Overview
NameTCONS_00002075
Unique NameTCONS_00002075
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1646

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00002075 ID=TCONS_00002075|Name=TCONS_00002075|organism=Clytia hemisphaerica|type=transcript|length=1646bp
gtgactttgaaagaaaaacattcgctGGCACATGTAGATTTGAAGAAAGC
TGATCTCAAAAGAGCGTCGTGAGGAGTTGTGAGGAGACATACGACAAACA
CAATGAAAGTTACATACCTCTGCTCACTGGTCTTTGTGTTAtgttgtctg
tttgataaaacaCTAACAGATGCTCAAGAAATCACTCCTATTGTCATTGT
ACCAGGAATCGGCGGGAGTCAGATCAATGCCAAGTTGAATAAAAGTTCTT
CCAAACACATTTACTGTTACAAAAGTTCCAGTGATTGGTTCACTATATGG
CTCAGCATCGAGGAATTGCTTCCATGGGCTAAAGACtgttgggtggaaaa
tttcaaGTTGCAATGGAACGAAGAAAACGGACGGATGGAAAATGTTCCTG
GAGTTTTCACGCAATGTCCAGACTTTGGGAACACAACGGCTATTGAATGG
TTAGACCCGTCTGTTCACGGACCTGGTGTTTACTTTTACCCTTTAGTGAA
TGGTTTGGTCAAGAAGTTCGGATATGTTCGTGGGAAAACACTCCGTGCTG
CGCCTTACGACTTTCGTTATGATCCAGgatCGGCTGATTTTTACATGTTA
CGCTTACAGAACTTGATTGAAGAAACATACAAAGATAACGGCAACCGAAA
AATCCTTTTGCTGTCACATAGCATGGGAGCTCCTTATACACTACATTTCT
TGCATGGAGCTTCGCAAGAATGGAAAGATAAATATATCAAATCGTGGTTC
ACTGTCTCAGGAACTTACGCTGGGTCGACGAAAGCTTTGAAAGCCTACAT
CTCAGGAGACGGTTTCGGAATCCCTTCGGTTCTTGATGAGCCTCTGATGC
TGAGAAGATTTCAAAAGACGTTCTCCTctctgttttatatttttcctgAT
CCTTCTTTCTGGCCCAAAGATATGGTGGTAGTGAAAACATTGAATGCAAC
TTATACCATCAATGAATATGAAAATTTATTCCAAGATCTCCGTGATCCCA
TATCCAGTAAAGTTTTGAAATCTGTGCCCAAATCCTGGAACGATACAGCA
CCAGGTATAAAAGTGTATTGTGTCCACGGCACGGATGTTCCGACGTCGGA
AGTGTTGACTTACGGTGACAATTTTCCCGACGCGACGCCGACTATCACAA
CAGGTGACGGGGATGGAACGGTCAACCATCGAAGTTTAGAAGCATGCAAA
CGGTGGAATGGAAATAGTGACGTCACTTATAAAACAATCAAAGGAGCCTC
GCATAATGGAATTTTGGGGGACccaaaacttttagatttcatGAAAGAAG
CCTTATTTGAATAAATGTGATGGAGGAAGAAATTGGGTAGAGTTGAAACA
AGGAGACAACATATTAATAGGGAAATTTAGATTagatttttaaagtttat
ttttggTAAGTCATTTTTGAAACATGTACATAATATTTTAGGACCATTCA
ATACTTTTATCAATGGACGAGAAACTTTTGGGGattgaaaattagtttca
aatttttttacggTAGGATTTTGTAAATAATGAAATTGATCGAAATAATA
TGCTTACGATTAACATTTTTGTAAAAGTATAGTATAGACTGTGCATAATA
ACGATTCCATTGTCcagtagtctgaatcgcagccTTCTACAAAACC
Run BLAST on NCBI

protein sequence of TCONS_00002075-protein

>TCONS_00002075-protein ID=TCONS_00002075-protein|Name=TCONS_00002075-protein|organism=Clytia hemisphaerica|type=polypeptide|length=403bp
MKVTYLCSLVFVLCCLFDKTLTDAQEITPIVIVPGIGGSQINAKLNKSSS
KHIYCYKSSSDWFTIWLSIEELLPWAKDCWVENFKLQWNEENGRMENVPG
VFTQCPDFGNTTAIEWLDPSVHGPGVYFYPLVNGLVKKFGYVRGKTLRAA
PYDFRYDPGSADFYMLRLQNLIEETYKDNGNRKILLLSHSMGAPYTLHFL
HGASQEWKDKYIKSWFTVSGTYAGSTKALKAYISGDGFGIPSVLDEPLML
RRFQKTFSSLFYIFPDPSFWPKDMVVVKTLNATYTINEYENLFQDLRDPI
SSKVLKSVPKSWNDTAPGIKVYCVHGTDVPTSEVLTYGDNFPDATPTITT
GDGDGTVNHRSLEACKRWNGNSDVTYKTIKGASHNGILGDPKLLDFMKEA
LFE
Run BLAST on NCBI

transcript from alignment at sc0000018:817520..821781+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00002075 ID=TCONS_00002075|Name=TCONS_00002075|organism=Clytia hemisphaerica|type=transcript|length=4262bp|location=Sequence derived from alignment at sc0000018:817520..821781+ (Clytia hemisphaerica)
gtgactttgaaagaaaaacattcgctGGCACATGTAGATTTGAAGAAAGC TGATCTCAAAAGAGCGTCGTGAGGAGTTGTGAGGGTAAAATTATCAAATG TTATTTTACTTTGCATGAAAGATCTCTTGTAAATCTACTAGCATTTTGTT ATTACAGAGAGTAATGCCTTAATTTGACCTTTGATGTTGGATTGCCTGTG ACATGATTATGAACTTTTAAACCCTACCTCATTCACATCAATTTCACATT TTATCTTTATATCCCTCGTAGAGACATACGACAAACACAATGAAAGTTAC ATACCTCTGCTCACTGGTCTTTGTGTTAtgttgtctgtttgataaaacaC TAACAGATGCTCAAGAAATCACTCCTATTGTCATTGGTAAGCCTACATAT TTTTTCCTACTACTGTTTTTTTATACTAGCAGAATCTGCTTCGATTATAA CTTGGCTCTTTTTAAGTTTTCATTAATGATTGTCTCTTctttaaaagttt aatttgcAAAGTGACCAAAATACTTTTTACTCAAAGTTAAACGAGGGCTG ACAACGTTAATTTCTTTGTGGGACTTTCCAAGTTGAGAAAGCATTATCTT ACATTTCTAATTGCAAAATCTTCCTGAGAAAATTAACTTAATAAAGGGAT ATAACGCTTTTACTGCAAAACTTTCCAATAATTGGCTTAAAATAAAAAcg ttagaaaaaaaatgttgaaaataaaatgttagaAATAATCCGTTACAAAG ACCAATACTCTGGTCAATAACCTCAATGGTGTTTACATCTCAATCATAAT CTATCCATGTGTTTCTATACTTTTAGTACCAGGAATCGGCGGGAGTCAGA TCAATGCCAAGTTGAATAAAAGTTCTTCCAAACACATTTACTGTTACAAA AGTTCCAGTGATTGGTTCACTATATGGCTCAGCATCGAGGAATTGCTTCC ATGGGCTAAAGACtgttgggtggaaaatttcaagtaagTATTTTATCAGA ATGTCCACTTTTATCTTGAATTTCGGCAagcagaaattatttttttcacg aACTAATTTGGCAAATTTCAGTCGTCGCATCGTTCATTAGAATTAACCAT TGGTAGTGTTTTCCAATTATATTGGCATTGAATTTTGTAATACGATGAGA TAGGAATATAATTCTAACTCAAGTTTTCTGAACTGAGGTTGACTTTTAAT GCACTGGCTTGGCAGGTCGATGGCCGCTGTGAACAACCCTGGAATAGTTC AATTTGATTCACTGATTGACAGTGTTTTCCCACGATCTTGGGGTTGAATT CTGATTCTTTGAGACTAGTTTAGGTACAAActtattcttttttatgattt ttgtttttgatgcaGGTAACTGCAAGTTTATCGCTatttctaaaaatgat aaaGCGTATTGGTTAAAAACCCAAATCTTCTGTGTTTTTTACActaaatt ctttgaaaaacaaaaatcataaaaaagaaataagtttatacctaaactac tTTGAGACAGGCgtgtaaaaatcaaaacaaataaatcTCTTTCCAGGTTG CAATGGAACGAAGAAAACGGACGGATGGAAAATGTTCCTGGAGTTTTCAC GCAATGTCCAGACTTTGGGAACACAACGGCTATTGAATGGTTAGACCCGT CTGTTCACGGACCTGGTGTTTACTTTTACCCTTTAGTGAATGGTTTGGTC AAGAAGTTCGGATATGTTCGTGGGAAAACACTCCGTGCTGCGCCTTACGA CTTTCGTTATGATCCAGGTAGATTACGTTTTTCCTTTAACTCACTCCGTG TCAATATCATAGAGAAGATCGGGTGCCGGGTGTTagtttgactttttgaa atcattatttttgttcaaacttgaTGGAAATGACCATGATCCCAAGGAAA AAGATTTTGACATTTGGTTTGTGTATTGATGGAAATAGATCGCAAAATCA ACAAACTGCTCcttattaagggctctgaccatattcaaaaaatagatttt tgtatttgaacataaaagttttgtttcaggttcctttacacttttaacaa agaactgcctttaaaaattgctttttactCAAATCCCTTAAAAGTTATTA AGAatctgtttttctatgaaaaattggtcaaaaagcacttttttcaagat tttccgaaaatatatttttagttcggtaaaagatacaccatctatgtacc tcaaaagttttttcgaaatatttctttatcgccgaaaataagcttttcaa agttgaaatacttttcgttgcaaaagtcttcattttcttcttcattaaat tttttctttgagattcttaaatttttagaCTCAAGGATAGTTGAcgtaac agaaaatgtataacatgccacagttttgttaGCTTTATCAGGCAGAAATT AATATTTTGTACGTGACAAATATTAAAAtttactatggtcagagccctta attaaAGATGAGAGTAAGGAAAATTTGGCGGAAAAGTATTCTTTTTCCAA GATTCACATCGCCATTagaacaactttttttttgtttttaggatCGGCTG ATTTTTACATGTTACGCTTACAGAACTTGATTGAAGAAACATACAAAGAT AACGGCAACCGAAAAATCCTTTTGCTGTCACATAGCATGGGAGCTCCTTA TACACTACATTTCTTGCATGGAGCTTCGCAAGAATGGAAAGATAAATATA TCAAATCGTGGTTCACTGTCTCAGGTATCAAAACAACTTCTCTGTTTACA TTTCACTGATCTAGTATATGACATTCGTTGAGTACTTCGAGTTGACCAGA AGACACATCACTTAAATGTAATATGATTCATCTGTCCACAATCTCTGAAG TATTGCATTACCTACTGGATAACTCTAATTCTGTCTCGatgaacacccct gtgtcacagacccggtgaaaCCCCCGACCTACGTGAAAATCTGGCAAAAT TTCGTCTTAGAAAGAGAAAATGAgaataaaaaagattatttgAATCGCTA TAAATGTAACCCGCCCTTTTTCTTTGAGCTTTCAaacaaattgtttttct tttaacagGAACTTACGCTGGGTCGACGAAAGCTTTGAAAGCCTACATCT CAGGAGACGGTTTCGGAATCCCTTCGGTTCTTGATGAGCCTCTGATGCTG AGAAGATTTCAAAAGACGTTCTCCTctctgttttatatttttcctgATCC TTCTTTCTGGCCCAAAGATATGGTAAGGCTCTCTtcatctttttctaaaa attctcGTTTCTTTATGACAAAAAGTGAAGATTTTCTATATTTATTTGAC CAACAATTTGAATTCTTAACTTTCATAAAACATCAAACGCTGATTGtatt tatatttctttttttttgcgacACACGCAAGATCTCACTAATCATGTCTT ACATACAAAAAAAATCCAGAATTGTCTGGTAATGCCGGAGAATCAGGTAA AATGGccatgaaacatttttttttaagctttcattattttagatattttt actGCTACGGAATATAGTTATTTTCAAACTTATGTTTCAGGTGGTAGTGA AAACATTGAATGCAACTTATACCATCAATGAATATGAAAATTTATTCCAA GATCTCCGTGATCCCATATCCAGTAAAGTTTTGAAATCTGTGCCCAAATC CTGGAACGATACAGCACCAGGTATAAAAGTGTATTGTGTCCACGGCACGG ATGTTCCGACGTCGGAAGTGTTGACTTACGGTGACAATTTTCCCGACGCG ACGCCGACTATCACAACAGGTGACGGGGATGGAACGGTCAACCATCGAAG TTTAGAAGCATGCAAACGGTGGAATGGAAATAGTGACGTCACTTATAAAA CAATCAAAGGAGCCTCGCATAATGGAATTTTGGGGGACccaaaactttta gatttcatGAAAGAAGCCTTATTTGAATAAATGTGATGGAGGAAGAAATT GGGTAGAGTTGAAACAAGGAGACAACATATTAATAGGGAAATTTAGATTa gatttttaaagtttatttttggTAAGTCATTTTTGAAACATGTACATAAT ATTTTAGGACCATTCAATACTTTTATCAATGGACGAGAAACTTTTGGGGa ttgaaaattagtttcaaatttttttacggTAGGATTTTGTAAATAATGAA ATTGATCGAAATAATATGCTTACGATTAACATTTTTGTAAAAGTATAGTA TAGACTGTGCATAATAACGATTCCATTGTCcagtagtctgaatcgcagcc TTCTACAAAACC

Coding sequence (CDS) from alignment at sc0000018:817520..821781+

>TCONS_00002075 ID=TCONS_00002075|Name=TCONS_00002075|organism=Clytia hemisphaerica|type=CDS|length=7272bp|location=Sequence derived from alignment at sc0000018:817520..821781+ (Clytia hemisphaerica)
ATGAAAGTTACATACCTCTGCTCACTGGTCTTTGTGTTAtgttgtctgtt
tgataaaacaCTAACAGATGCTCAAGAAATCACTCCTATTGTCATTGTAC
CAGGAATCGGCGGGAGTCAGATCAATGCCAAGTTGAATAAAAGTTCTTCC
AAACACATTTACTGTTACAAAAGTTCCAGTGATTGGTTCACTATATGGCT
CAGCATCGAGGAATTGCTTCCATGGGCTAAAGACtgttgggtggaaaatt
tcaaGTTGCAATGGAACGAAGAAAACGGACGGATGGAAAATGTTCCTGGA
GTTTTCACGCAATGTCCAGACTTTGGGAACACAACGGCTATTGAATGGTT
AGACCCGTCTGTTCACGGACCTGGTGTTTACTTTTACCCTTTAGTGAATG
GTTTGGTCAAGAAGTTCGGATATGTTCGTGGGAAAACACTCCGTGCTGCG
CCTTACGACTTTCGTTATGATCCAGgatCGGCTGATTTTTACATGTTACG
CTTACAGAACTTGATTGAAGAAACATACAAAGATAACGGCAACCGAAAAA
TCCTTTTGCTGTCACATAGCATGGGAGCTCCTTATACACTACATTTCTTG
CATGGAGCTTCGCAAGAATGGAAAGATAAATATATCAAATCGTGGTTCAC
TGTCTCAGGAACTTACGCTGGGTCGACGAAAGCTTTGAAAGCCTACATCT
CAGGAGACGGTTTCGGAATCCCTTCGGTTCTTGATGAGCCTCTGATGCTG
AGAAGATTTCAAAAGACGTTCTCCTctctgttttatatttttcctgATCC
TTCTTTCTGGCCCAAAGATATGGTGGTAGTGAAAACATTGAATGCAACTT
ATACCATCAATGAATATGAAAATTTATTCCAAGATCTCCGTGATCCCATA
TCCAGTAAAGTTTTGAAATCTGTGCCCAAATCCTGGAACGATACAGCACC
AGGTATAAAAGTGTATTGTGTCCACGGCACGGATGTTCCGACGTCGGAAG
TGTTGACTTACGGTGACAATTTTCCCGACGCGACGCCGACTATCACAACA
GGTGACGGGGATGGAACGGTCAACCATCGAAGTTTAGAAGCATGCAAACG
GTGGAATGGAAATAGTGACGTCACTTATAAAACAATCAAAGGAGCCTCGC
ATAATGGAATTTTGGGGGACccaaaacttttagatttcatGAAAGAAGCC
TTATTTGAATAAATGAAAGTTACATACCTCTGCTCACTGGTCTTTGTGTT
AtgttgtctgtttgataaaacaCTAACAGATGCTCAAGAAATCACTCCTA
TTGTCATTGTACCAGGAATCGGCGGGAGTCAGATCAATGCCAAGTTGAAT
AAAAGTTCTTCCAAACACATTTACTGTTACAAAAGTTCCAGTGATTGGTT
CACTATATGGCTCAGCATCGAGGAATTGCTTCCATGGGCTAAAGACtgtt
gggtggaaaatttcaaGTTGCAATGGAACGAAGAAAACGGACGGATGGAA
AATGTTCCTGGAGTTTTCACGCAATGTCCAGACTTTGGGAACACAACGGC
TATTGAATGGTTAGACCCGTCTGTTCACGGACCTGGTGTTTACTTTTACC
CTTTAGTGAATGGTTTGGTCAAGAAGTTCGGATATGTTCGTGGGAAAACA
CTCCGTGCTGCGCCTTACGACTTTCGTTATGATCCAGgatCGGCTGATTT
TTACATGTTACGCTTACAGAACTTGATTGAAGAAACATACAAAGATAACG
GCAACCGAAAAATCCTTTTGCTGTCACATAGCATGGGAGCTCCTTATACA
CTACATTTCTTGCATGGAGCTTCGCAAGAATGGAAAGATAAATATATCAA
ATCGTGGTTCACTGTCTCAGGAACTTACGCTGGGTCGACGAAAGCTTTGA
AAGCCTACATCTCAGGAGACGGTTTCGGAATCCCTTCGGTTCTTGATGAG
CCTCTGATGCTGAGAAGATTTCAAAAGACGTTCTCCTctctgttttatat
ttttcctgATCCTTCTTTCTGGCCCAAAGATATGGTGGTAGTGAAAACAT
TGAATGCAACTTATACCATCAATGAATATGAAAATTTATTCCAAGATCTC
CGTGATCCCATATCCAGTAAAGTTTTGAAATCTGTGCCCAAATCCTGGAA
CGATACAGCACCAGGTATAAAAGTGTATTGTGTCCACGGCACGGATGTTC
CGACGTCGGAAGTGTTGACTTACGGTGACAATTTTCCCGACGCGACGCCG
ACTATCACAACAGGTGACGGGGATGGAACGGTCAACCATCGAAGTTTAGA
AGCATGCAAACGGTGGAATGGAAATAGTGACGTCACTTATAAAACAATCA
AAGGAGCCTCGCATAATGGAATTTTGGGGGACccaaaacttttagatttc
atGAAAGAAGCCTTATTTGAATAAATGAAAGTTACATACCTCTGCTCACT
GGTCTTTGTGTTAtgttgtctgtttgataaaacaCTAACAGATGCTCAAG
AAATCACTCCTATTGTCATTGTACCAGGAATCGGCGGGAGTCAGATCAAT
GCCAAGTTGAATAAAAGTTCTTCCAAACACATTTACTGTTACAAAAGTTC
CAGTGATTGGTTCACTATATGGCTCAGCATCGAGGAATTGCTTCCATGGG
CTAAAGACtgttgggtggaaaatttcaaGTTGCAATGGAACGAAGAAAAC
GGACGGATGGAAAATGTTCCTGGAGTTTTCACGCAATGTCCAGACTTTGG
GAACACAACGGCTATTGAATGGTTAGACCCGTCTGTTCACGGACCTGGTG
TTTACTTTTACCCTTTAGTGAATGGTTTGGTCAAGAAGTTCGGATATGTT
CGTGGGAAAACACTCCGTGCTGCGCCTTACGACTTTCGTTATGATCCAGg
atCGGCTGATTTTTACATGTTACGCTTACAGAACTTGATTGAAGAAACAT
ACAAAGATAACGGCAACCGAAAAATCCTTTTGCTGTCACATAGCATGGGA
GCTCCTTATACACTACATTTCTTGCATGGAGCTTCGCAAGAATGGAAAGA
TAAATATATCAAATCGTGGTTCACTGTCTCAGGAACTTACGCTGGGTCGA
CGAAAGCTTTGAAAGCCTACATCTCAGGAGACGGTTTCGGAATCCCTTCG
GTTCTTGATGAGCCTCTGATGCTGAGAAGATTTCAAAAGACGTTCTCCTc
tctgttttatatttttcctgATCCTTCTTTCTGGCCCAAAGATATGGTGG
TAGTGAAAACATTGAATGCAACTTATACCATCAATGAATATGAAAATTTA
TTCCAAGATCTCCGTGATCCCATATCCAGTAAAGTTTTGAAATCTGTGCC
CAAATCCTGGAACGATACAGCACCAGGTATAAAAGTGTATTGTGTCCACG
GCACGGATGTTCCGACGTCGGAAGTGTTGACTTACGGTGACAATTTTCCC
GACGCGACGCCGACTATCACAACAGGTGACGGGGATGGAACGGTCAACCA
TCGAAGTTTAGAAGCATGCAAACGGTGGAATGGAAATAGTGACGTCACTT
ATAAAACAATCAAAGGAGCCTCGCATAATGGAATTTTGGGGGACccaaaa
cttttagatttcatGAAAGAAGCCTTATTTGAATAAATGAAAGTTACATA
CCTCTGCTCACTGGTCTTTGTGTTAtgttgtctgtttgataaaacaCTAA
CAGATGCTCAAGAAATCACTCCTATTGTCATTGTACCAGGAATCGGCGGG
AGTCAGATCAATGCCAAGTTGAATAAAAGTTCTTCCAAACACATTTACTG
TTACAAAAGTTCCAGTGATTGGTTCACTATATGGCTCAGCATCGAGGAAT
TGCTTCCATGGGCTAAAGACtgttgggtggaaaatttcaaGTTGCAATGG
AACGAAGAAAACGGACGGATGGAAAATGTTCCTGGAGTTTTCACGCAATG
TCCAGACTTTGGGAACACAACGGCTATTGAATGGTTAGACCCGTCTGTTC
ACGGACCTGGTGTTTACTTTTACCCTTTAGTGAATGGTTTGGTCAAGAAG
TTCGGATATGTTCGTGGGAAAACACTCCGTGCTGCGCCTTACGACTTTCG
TTATGATCCAGgatCGGCTGATTTTTACATGTTACGCTTACAGAACTTGA
TTGAAGAAACATACAAAGATAACGGCAACCGAAAAATCCTTTTGCTGTCA
CATAGCATGGGAGCTCCTTATACACTACATTTCTTGCATGGAGCTTCGCA
AGAATGGAAAGATAAATATATCAAATCGTGGTTCACTGTCTCAGGAACTT
ACGCTGGGTCGACGAAAGCTTTGAAAGCCTACATCTCAGGAGACGGTTTC
GGAATCCCTTCGGTTCTTGATGAGCCTCTGATGCTGAGAAGATTTCAAAA
GACGTTCTCCTctctgttttatatttttcctgATCCTTCTTTCTGGCCCA
AAGATATGGTGGTAGTGAAAACATTGAATGCAACTTATACCATCAATGAA
TATGAAAATTTATTCCAAGATCTCCGTGATCCCATATCCAGTAAAGTTTT
GAAATCTGTGCCCAAATCCTGGAACGATACAGCACCAGGTATAAAAGTGT
ATTGTGTCCACGGCACGGATGTTCCGACGTCGGAAGTGTTGACTTACGGT
GACAATTTTCCCGACGCGACGCCGACTATCACAACAGGTGACGGGGATGG
AACGGTCAACCATCGAAGTTTAGAAGCATGCAAACGGTGGAATGGAAATA
GTGACGTCACTTATAAAACAATCAAAGGAGCCTCGCATAATGGAATTTTG
GGGGACccaaaacttttagatttcatGAAAGAAGCCTTATTTGAATAAAT
GAAAGTTACATACCTCTGCTCACTGGTCTTTGTGTTAtgttgtctgtttg
ataaaacaCTAACAGATGCTCAAGAAATCACTCCTATTGTCATTGTACCA
GGAATCGGCGGGAGTCAGATCAATGCCAAGTTGAATAAAAGTTCTTCCAA
ACACATTTACTGTTACAAAAGTTCCAGTGATTGGTTCACTATATGGCTCA
GCATCGAGGAATTGCTTCCATGGGCTAAAGACtgttgggtggaaaatttc
aaGTTGCAATGGAACGAAGAAAACGGACGGATGGAAAATGTTCCTGGAGT
TTTCACGCAATGTCCAGACTTTGGGAACACAACGGCTATTGAATGGTTAG
ACCCGTCTGTTCACGGACCTGGTGTTTACTTTTACCCTTTAGTGAATGGT
TTGGTCAAGAAGTTCGGATATGTTCGTGGGAAAACACTCCGTGCTGCGCC
TTACGACTTTCGTTATGATCCAGgatCGGCTGATTTTTACATGTTACGCT
TACAGAACTTGATTGAAGAAACATACAAAGATAACGGCAACCGAAAAATC
CTTTTGCTGTCACATAGCATGGGAGCTCCTTATACACTACATTTCTTGCA
TGGAGCTTCGCAAGAATGGAAAGATAAATATATCAAATCGTGGTTCACTG
TCTCAGGAACTTACGCTGGGTCGACGAAAGCTTTGAAAGCCTACATCTCA
GGAGACGGTTTCGGAATCCCTTCGGTTCTTGATGAGCCTCTGATGCTGAG
AAGATTTCAAAAGACGTTCTCCTctctgttttatatttttcctgATCCTT
CTTTCTGGCCCAAAGATATGGTGGTAGTGAAAACATTGAATGCAACTTAT
ACCATCAATGAATATGAAAATTTATTCCAAGATCTCCGTGATCCCATATC
CAGTAAAGTTTTGAAATCTGTGCCCAAATCCTGGAACGATACAGCACCAG
GTATAAAAGTGTATTGTGTCCACGGCACGGATGTTCCGACGTCGGAAGTG
TTGACTTACGGTGACAATTTTCCCGACGCGACGCCGACTATCACAACAGG
TGACGGGGATGGAACGGTCAACCATCGAAGTTTAGAAGCATGCAAACGGT
GGAATGGAAATAGTGACGTCACTTATAAAACAATCAAAGGAGCCTCGCAT
AATGGAATTTTGGGGGACccaaaacttttagatttcatGAAAGAAGCCTT
ATTTGAATAAATGAAAGTTACATACCTCTGCTCACTGGTCTTTGTGTTAt
gttgtctgtttgataaaacaCTAACAGATGCTCAAGAAATCACTCCTATT
GTCATTGTACCAGGAATCGGCGGGAGTCAGATCAATGCCAAGTTGAATAA
AAGTTCTTCCAAACACATTTACTGTTACAAAAGTTCCAGTGATTGGTTCA
CTATATGGCTCAGCATCGAGGAATTGCTTCCATGGGCTAAAGACtgttgg
gtggaaaatttcaaGTTGCAATGGAACGAAGAAAACGGACGGATGGAAAA
TGTTCCTGGAGTTTTCACGCAATGTCCAGACTTTGGGAACACAACGGCTA
TTGAATGGTTAGACCCGTCTGTTCACGGACCTGGTGTTTACTTTTACCCT
TTAGTGAATGGTTTGGTCAAGAAGTTCGGATATGTTCGTGGGAAAACACT
CCGTGCTGCGCCTTACGACTTTCGTTATGATCCAGgatCGGCTGATTTTT
ACATGTTACGCTTACAGAACTTGATTGAAGAAACATACAAAGATAACGGC
AACCGAAAAATCCTTTTGCTGTCACATAGCATGGGAGCTCCTTATACACT
ACATTTCTTGCATGGAGCTTCGCAAGAATGGAAAGATAAATATATCAAAT
CGTGGTTCACTGTCTCAGGAACTTACGCTGGGTCGACGAAAGCTTTGAAA
GCCTACATCTCAGGAGACGGTTTCGGAATCCCTTCGGTTCTTGATGAGCC
TCTGATGCTGAGAAGATTTCAAAAGACGTTCTCCTctctgttttatattt
ttcctgATCCTTCTTTCTGGCCCAAAGATATGGTGGTAGTGAAAACATTG
AATGCAACTTATACCATCAATGAATATGAAAATTTATTCCAAGATCTCCG
TGATCCCATATCCAGTAAAGTTTTGAAATCTGTGCCCAAATCCTGGAACG
ATACAGCACCAGGTATAAAAGTGTATTGTGTCCACGGCACGGATGTTCCG
ACGTCGGAAGTGTTGACTTACGGTGACAATTTTCCCGACGCGACGCCGAC
TATCACAACAGGTGACGGGGATGGAACGGTCAACCATCGAAGTTTAGAAG
CATGCAAACGGTGGAATGGAAATAGTGACGTCACTTATAAAACAATCAAA
GGAGCCTCGCATAATGGAATTTTGGGGGACccaaaacttttagatttcat
GAAAGAAGCCTTATTTGAATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001089XLOC_001089Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00002075-proteinTCONS_00002075-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00002075-exon-sc0000018-1491911889:817520..817603TCONS_00002075-exon-sc0000018-1491911889:817520..817603Clytia hemisphaericaexon
TCONS_00002075-exon-sc0000018-1510915933:817520..817603TCONS_00002075-exon-sc0000018-1510915933:817520..817603Clytia hemisphaericaexon
TCONS_00002075-exon-sc0000018-1575043694:817520..817603TCONS_00002075-exon-sc0000018-1575043694:817520..817603Clytia hemisphaericaexon
TCONS_00002075-exon-sc0000018-1491911889:817791..817905TCONS_00002075-exon-sc0000018-1491911889:817791..817905Clytia hemisphaericaexon
TCONS_00002075-exon-sc0000018-1510915933:817791..817905TCONS_00002075-exon-sc0000018-1510915933:817791..817905Clytia hemisphaericaexon
TCONS_00002075-exon-sc0000018-1575043694:817791..817905TCONS_00002075-exon-sc0000018-1575043694:817791..817905Clytia hemisphaericaexon
TCONS_00002075-exon-sc0000018-1491911889:818346..818502TCONS_00002075-exon-sc0000018-1491911889:818346..818502Clytia hemisphaericaexon
TCONS_00002075-exon-sc0000018-1510915933:818346..818502TCONS_00002075-exon-sc0000018-1510915933:818346..818502Clytia hemisphaericaexon
TCONS_00002075-exon-sc0000018-1575043694:818346..818502TCONS_00002075-exon-sc0000018-1575043694:818346..818502Clytia hemisphaericaexon
TCONS_00002075-exon-sc0000018-1491911889:819066..819286TCONS_00002075-exon-sc0000018-1491911889:819066..819286Clytia hemisphaericaexon
TCONS_00002075-exon-sc0000018-1510915933:819066..819286TCONS_00002075-exon-sc0000018-1510915933:819066..819286Clytia hemisphaericaexon
TCONS_00002075-exon-sc0000018-1575043694:819066..819286TCONS_00002075-exon-sc0000018-1575043694:819066..819286Clytia hemisphaericaexon
TCONS_00002075-exon-sc0000018-1491911889:820061..820243TCONS_00002075-exon-sc0000018-1491911889:820061..820243Clytia hemisphaericaexon
TCONS_00002075-exon-sc0000018-1510915933:820061..820243TCONS_00002075-exon-sc0000018-1510915933:820061..820243Clytia hemisphaericaexon
TCONS_00002075-exon-sc0000018-1575043694:820061..820243TCONS_00002075-exon-sc0000018-1575043694:820061..820243Clytia hemisphaericaexon
TCONS_00002075-exon-sc0000018-1491911889:820578..820741TCONS_00002075-exon-sc0000018-1491911889:820578..820741Clytia hemisphaericaexon
TCONS_00002075-exon-sc0000018-1510915933:820578..820741TCONS_00002075-exon-sc0000018-1510915933:820578..820741Clytia hemisphaericaexon
TCONS_00002075-exon-sc0000018-1575043694:820578..820741TCONS_00002075-exon-sc0000018-1575043694:820578..820741Clytia hemisphaericaexon
TCONS_00002075-exon-sc0000018-1491911889:821060..821781TCONS_00002075-exon-sc0000018-1491911889:821060..821781Clytia hemisphaericaexon
TCONS_00002075-exon-sc0000018-1510915933:821060..821781TCONS_00002075-exon-sc0000018-1510915933:821060..821781Clytia hemisphaericaexon
TCONS_00002075-exon-sc0000018-1575043694:821060..821781TCONS_00002075-exon-sc0000018-1575043694:821060..821781Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000018supercontigsc0000018:817520..821781 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.469086 0.529659 0.111815 0.300834 0.599295 0.394642 4.18985 4.33851 3.28715 2.577 3.27671 3.00899 16.3869 20.9228 26.3979 22.4917 36.7339 27.5639 9.3956 6.5637 3.03155 2.16563 3.84984 3.24271 7.3425 3.64319 0.575504 0.433548 5.34351 4.27159
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR003386LACT/PDAT_acylTrfase
IPR029058AB_hydrolase
Vocabulary: Molecular Function
TermDefinition
GO:0008374O-acyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0006629lipid metabolic process
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006629 lipid metabolic process
molecular_function GO:0008374 O-acyltransferase activity
Blast
BLAST of TCONS_00002075 vs. Swiss-Prot (Human)
Match: PAG15 (Group XV phospholipase A2 OS=Homo sapiens GN=PLA2G15 PE=1 SV=2)

HSP 1 Score: 218.009 bits (554), Expect = 4.056e-64
Identity = 135/374 (36.10%), Postives = 207/374 (55.35%), Query Frame = 1
Query:  217 SQINAKLNKSSSKHIYCYKSSSDWFTIWLSIEELLPWAKDCWVENFKLQWNEENGRMENVPGVFTQCPDFGNTTAIEWLDPSVHGPGVYFYPLVNGLVKKFGYVRGKTLRAAPYDFRYDPGSADFYMLRLQNLIEETYKDNGNRKILLLSHSMGAPYTLHFLHGASQEWKDKYIKSWFTVSGTYAGSTKALKAYISGDGFGIPSVLDEPLMLRRFQKTFSSLFYIFPDPSFWPKDMVVVKTLNATYTINEYENLFQD--------LRDPISSKVLKSVPKSWNDTAPGIKVYCVHGTDVPTSEVLTYGDNFPXXXXXXXXXXXXXXVNHRSLEACKRWNGNSD--VTYKTIKGASHNGILGDPKLLDFMKEALF 1308
            +Q+ AKL+K +  H  C K +  +FTIWL++E LLP   DCW++N +L +N+ +   +   GV  + P FG T ++E+LDPS    G YF+ +V  LV  +GY RG+ +R APYD+R  P     Y L L+ +IEE Y+  G   ++L++HSMG  YTL+FL    Q WKDKYI+++ ++   + G  K L+   SGD   IP +   PL +R  Q++  S  ++ P    W  + V V+T    YT+ +Y   FQD        +R      V  ++P       PG++++C++GT VPT +   Y ++FPD  P I  GDGDGTVN +S   C+ W    +  V  + + G+ H  +L +   L ++K  L 
Sbjct:   49 NQLEAKLDKPTVVHYLCSKKTESYFTIWLNLELLLPVIIDCWIDNIRLVYNKTSRATQFPDGVDVRVPGFGKTFSLEFLDPSKSSVGSYFHTMVESLV-GWGYTRGEDVRGAPYDWRRAPNENGPYFLALREMIEEMYQLYGG-PVVLVAHSMGNMYTLYFLQRQPQAWKDKYIRAFVSLGAPWGGVAKTLRVLASGDNNRIPVI--GPLKIREQQRSAVSTSWLLPYNYTWSPEKVFVQTPTINYTLRDYRKFFQDIGFEDGWLMRQDTEGLVEATMP-------PGVQLHCLYGTGVPTPDSFYY-ESFPDRDPKICFGDGDGTVNLKSALQCQAWQSRQEHQVLLQELPGSEHIEMLANATTLAYLKRVLL 410          
The following BLAST results are available for this feature:
BLAST of TCONS_00002075 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PAG154.056e-6436.10Group XV phospholipase A2 OS=Homo sapiens GN=PLA2G... [more]
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