XLOC_001089 (gene) - C. hemisphaerica

Overview
NameXLOC_001089
Unique NameXLOC_001089
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000018:817520..821781+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001089 ID=XLOC_001089|Name=XLOC_001089|organism=Clytia hemisphaerica|type=gene|length=4262bp|location=Sequence derived from alignment at sc0000018:817520..821781+ (Clytia hemisphaerica)
gtgactttgaaagaaaaacattcgctGGCACATGTAGATTTGAAGAAAGC TGATCTCAAAAGAGCGTCGTGAGGAGTTGTGAGGGTAAAATTATCAAATG TTATTTTACTTTGCATGAAAGATCTCTTGTAAATCTACTAGCATTTTGTT ATTACAGAGAGTAATGCCTTAATTTGACCTTTGATGTTGGATTGCCTGTG ACATGATTATGAACTTTTAAACCCTACCTCATTCACATCAATTTCACATT TTATCTTTATATCCCTCGTAGAGACATACGACAAACACAATGAAAGTTAC ATACCTCTGCTCACTGGTCTTTGTGTTAtgttgtctgtttgataaaacaC TAACAGATGCTCAAGAAATCACTCCTATTGTCATTGGTAAGCCTACATAT TTTTTCCTACTACTGTTTTTTTATACTAGCAGAATCTGCTTCGATTATAA CTTGGCTCTTTTTAAGTTTTCATTAATGATTGTCTCTTctttaaaagttt aatttgcAAAGTGACCAAAATACTTTTTACTCAAAGTTAAACGAGGGCTG ACAACGTTAATTTCTTTGTGGGACTTTCCAAGTTGAGAAAGCATTATCTT ACATTTCTAATTGCAAAATCTTCCTGAGAAAATTAACTTAATAAAGGGAT ATAACGCTTTTACTGCAAAACTTTCCAATAATTGGCTTAAAATAAAAAcg ttagaaaaaaaatgttgaaaataaaatgttagaAATAATCCGTTACAAAG ACCAATACTCTGGTCAATAACCTCAATGGTGTTTACATCTCAATCATAAT CTATCCATGTGTTTCTATACTTTTAGTACCAGGAATCGGCGGGAGTCAGA TCAATGCCAAGTTGAATAAAAGTTCTTCCAAACACATTTACTGTTACAAA AGTTCCAGTGATTGGTTCACTATATGGCTCAGCATCGAGGAATTGCTTCC ATGGGCTAAAGACtgttgggtggaaaatttcaagtaagTATTTTATCAGA ATGTCCACTTTTATCTTGAATTTCGGCAagcagaaattatttttttcacg aACTAATTTGGCAAATTTCAGTCGTCGCATCGTTCATTAGAATTAACCAT TGGTAGTGTTTTCCAATTATATTGGCATTGAATTTTGTAATACGATGAGA TAGGAATATAATTCTAACTCAAGTTTTCTGAACTGAGGTTGACTTTTAAT GCACTGGCTTGGCAGGTCGATGGCCGCTGTGAACAACCCTGGAATAGTTC AATTTGATTCACTGATTGACAGTGTTTTCCCACGATCTTGGGGTTGAATT CTGATTCTTTGAGACTAGTTTAGGTACAAActtattcttttttatgattt ttgtttttgatgcaGGTAACTGCAAGTTTATCGCTatttctaaaaatgat aaaGCGTATTGGTTAAAAACCCAAATCTTCTGTGTTTTTTACActaaatt ctttgaaaaacaaaaatcataaaaaagaaataagtttatacctaaactac tTTGAGACAGGCgtgtaaaaatcaaaacaaataaatcTCTTTCCAGGTTG CAATGGAACGAAGAAAACGGACGGATGGAAAATGTTCCTGGAGTTTTCAC GCAATGTCCAGACTTTGGGAACACAACGGCTATTGAATGGTTAGACCCGT CTGTTCACGGACCTGGTGTTTACTTTTACCCTTTAGTGAATGGTTTGGTC AAGAAGTTCGGATATGTTCGTGGGAAAACACTCCGTGCTGCGCCTTACGA CTTTCGTTATGATCCAGGTAGATTACGTTTTTCCTTTAACTCACTCCGTG TCAATATCATAGAGAAGATCGGGTGCCGGGTGTTagtttgactttttgaa atcattatttttgttcaaacttgaTGGAAATGACCATGATCCCAAGGAAA AAGATTTTGACATTTGGTTTGTGTATTGATGGAAATAGATCGCAAAATCA ACAAACTGCTCcttattaagggctctgaccatattcaaaaaatagatttt tgtatttgaacataaaagttttgtttcaggttcctttacacttttaacaa agaactgcctttaaaaattgctttttactCAAATCCCTTAAAAGTTATTA AGAatctgtttttctatgaaaaattggtcaaaaagcacttttttcaagat tttccgaaaatatatttttagttcggtaaaagatacaccatctatgtacc tcaaaagttttttcgaaatatttctttatcgccgaaaataagcttttcaa agttgaaatacttttcgttgcaaaagtcttcattttcttcttcattaaat tttttctttgagattcttaaatttttagaCTCAAGGATAGTTGAcgtaac agaaaatgtataacatgccacagttttgttaGCTTTATCAGGCAGAAATT AATATTTTGTACGTGACAAATATTAAAAtttactatggtcagagccctta attaaAGATGAGAGTAAGGAAAATTTGGCGGAAAAGTATTCTTTTTCCAA GATTCACATCGCCATTagaacaactttttttttgtttttaggatCGGCTG ATTTTTACATGTTACGCTTACAGAACTTGATTGAAGAAACATACAAAGAT AACGGCAACCGAAAAATCCTTTTGCTGTCACATAGCATGGGAGCTCCTTA TACACTACATTTCTTGCATGGAGCTTCGCAAGAATGGAAAGATAAATATA TCAAATCGTGGTTCACTGTCTCAGGTATCAAAACAACTTCTCTGTTTACA TTTCACTGATCTAGTATATGACATTCGTTGAGTACTTCGAGTTGACCAGA AGACACATCACTTAAATGTAATATGATTCATCTGTCCACAATCTCTGAAG TATTGCATTACCTACTGGATAACTCTAATTCTGTCTCGatgaacacccct gtgtcacagacccggtgaaaCCCCCGACCTACGTGAAAATCTGGCAAAAT TTCGTCTTAGAAAGAGAAAATGAgaataaaaaagattatttgAATCGCTA TAAATGTAACCCGCCCTTTTTCTTTGAGCTTTCAaacaaattgtttttct tttaacagGAACTTACGCTGGGTCGACGAAAGCTTTGAAAGCCTACATCT CAGGAGACGGTTTCGGAATCCCTTCGGTTCTTGATGAGCCTCTGATGCTG AGAAGATTTCAAAAGACGTTCTCCTctctgttttatatttttcctgATCC TTCTTTCTGGCCCAAAGATATGGTAAGGCTCTCTtcatctttttctaaaa attctcGTTTCTTTATGACAAAAAGTGAAGATTTTCTATATTTATTTGAC CAACAATTTGAATTCTTAACTTTCATAAAACATCAAACGCTGATTGtatt tatatttctttttttttgcgacACACGCAAGATCTCACTAATCATGTCTT ACATACAAAAAAAATCCAGAATTGTCTGGTAATGCCGGAGAATCAGGTAA AATGGccatgaaacatttttttttaagctttcattattttagatattttt actGCTACGGAATATAGTTATTTTCAAACTTATGTTTCAGGTGGTAGTGA AAACATTGAATGCAACTTATACCATCAATGAATATGAAAATTTATTCCAA GATCTCCGTGATCCCATATCCAGTAAAGTTTTGAAATCTGTGCCCAAATC CTGGAACGATACAGCACCAGGTATAAAAGTGTATTGTGTCCACGGCACGG ATGTTCCGACGTCGGAAGTGTTGACTTACGGTGACAATTTTCCCGACGCG ACGCCGACTATCACAACAGGTGACGGGGATGGAACGGTCAACCATCGAAG TTTAGAAGCATGCAAACGGTGGAATGGAAATAGTGACGTCACTTATAAAA CAATCAAAGGAGCCTCGCATAATGGAATTTTGGGGGACccaaaactttta gatttcatGAAAGAAGCCTTATTTGAATAAATGTGATGGAGGAAGAAATT GGGTAGAGTTGAAACAAGGAGACAACATATTAATAGGGAAATTTAGATTa gatttttaaagtttatttttggTAAGTCATTTTTGAAACATGTACATAAT ATTTTAGGACCATTCAATACTTTTATCAATGGACGAGAAACTTTTGGGGa ttgaaaattagtttcaaatttttttacggTAGGATTTTGTAAATAATGAA ATTGATCGAAATAATATGCTTACGATTAACATTTTTGTAAAAGTATAGTA TAGACTGTGCATAATAACGATTCCATTGTCcagtagtctgaatcgcagcc TTCTACAAAACC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00002075TCONS_00002075Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00002075-proteinTCONS_00002075-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000018supercontigsc0000018:817520..821781 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
PLA2G15PREDICTED: group XV phospholipase A2 isoform X1 Homo Sapiens
LCATphosphatidylcholine-sterol acyltransferase precursor Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.47 0.53 0.11 0.3 0.6 0.39 4.19 4.34 3.29 2.58 3.28 3.01 16.39 20.92 26.4 22.49 36.73 27.56 9.4 6.56 3.03 2.17 3.85 3.24 7.34 3.64 0.58 0.43 5.34 4.27