|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00002071 ID=TCONS_00002071|Name=TCONS_00002071|organism=Clytia hemisphaerica|type=transcript|length=1311bp TTAGGCTGACTTACAACGAGAAGGAAGATCGAATGGAAAATACTGAAGGT GTTTTCACCAGAATTCCTGGGTTTGGAAACACATCTGGCNAAGGCATTGT TCTTGTTTAGGCTGACTTACAACGAGAAGGAAGATCGAATGGAAAATACT GAAGGTGTTTTCACCAGAATTCCTGGGTTTGGAAACACATCTGGCATCGA ATGGCTGGATCCTTATGTGCATGGACCTGGTATCTACTTCTTCCCTTTGG TGGATTCATTAACCAGATTGCTGGGTTATGAGCGTGGAAAAACTTTACGA TCTGCTCCGTATGACTTCCGCTACCATCCTGGAGATGCTGGTGATTATTT TGATCGtttgaagaagttgattgaAGAGACGTACATGATGAATGGAGAGA AGAAGATTATGTTGCTTTCTCATAGCATGGGTGTTCCTTACTCCCTCAAC TTTCTTCATCGACAAACTGAAGaatggaaagaaaaatatatcgTGGCATG GACCACTATTTCTGGTGTATTCGGAGGTTCTATGAAAGCTGTGAAAGCGT TCATATCTGGTGATGGATTTGGTATTCCCAAAGTGCTTGATTATCCAATC ACATTGCGAGCTTTTCAACGAACATTCAGTAGTTTACCTTACATCCTTCC TGATGAAAGTTTTTGGGCCAAGGATGAGGTAATCGTCAAAACGTCGAATC GGACATACACAGTACACCAATACGACGACCTCTTCAAAGACATGGGTTAT CCTCTAGCAAGTAAAATCTATGCAAAGACTCCTAAAGCGTGGTCAGAAAA ACCTCCTAACgtcaaaatgttttgttttcacgGGAGTGGTAAGGACACTC CCGGTGTTTTGAATTACCGAGAAGGATATTTTCCGAATTACACACCGGAC ATAACAATTGATGATGGGGATGGGACGGTGAACTTGCGGAGTCTTCAAGC GTGTCAGTTGTGGagggaaaaacaaaaacaaccaaTAATTTATGAAGAAT TTTCTAGAGGTGAGCATAATGGTGTTTTGGGTGACGCTCGGCTCATCAGG TCCATCATTAAAGCTCTTAGTGAAGATTGATAGTCTCATATCTTTAATAC ATTTGTGTAAATTCATTTTAATCTATATACCGTACTTCactattatttta acattttttgttgtttagtATTTAAAACATGTAGTATATTTTTAGTCAGT ATTGTCTACtttttgaaaacgttttaaATGGACGGACCATTGTGTAAATA AGCAGGAATTTTCTAtcatagaaaaatatatttttaaacgaACTTTCCAA AGTTTTCTCTC Run BLAST on NCBI protein sequence of TCONS_00002071-protein >TCONS_00002071-protein ID=TCONS_00002071-protein|Name=TCONS_00002071-protein|organism=Clytia hemisphaerica|type=polypeptide|length=313bp
MENTEGVFTRIPGFGNTSGIEWLDPYVHGPGIYFFPLVDSLTRLLGYERG KTLRSAPYDFRYHPGDAGDYFDRLKKLIEETYMMNGEKKIMLLSHSMGVP YSLNFLHRQTEEWKEKYIVAWTTISGVFGGSMKAVKAFISGDGFGIPKVL DYPITLRAFQRTFSSLPYILPDESFWAKDEVIVKTSNRTYTVHQYDDLFK DMGYPLASKIYAKTPKAWSEKPPNVKMFCFHGSGKDTPGVLNYREGYFPN YTPDITIDDGDGTVNLRSLQACQLWREKQKQPIIYEEFSRGEHNGVLGDA RLIRSIIKALSED Run BLAST on NCBI transcript from alignment at sc0000018:811203..816885+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00002071 ID=TCONS_00002071|Name=TCONS_00002071|organism=Clytia hemisphaerica|type=transcript|length=5683bp|location=Sequence derived from alignment at sc0000018:811203..816885+ (Clytia hemisphaerica) TTAGGCTGACTTACAACGAGAAGGAAGATCGAATGGAAAATACTGAAGGT
GTTTTCACCAGAATTCCTGGGTTTGGAAACACATCTGGCNAAGGCATTGT
TCTTGTTTAGGCTGACTTACAACGAGAAGGAAGATCGAATGGAAAATACT
GAAGGTGTTTTCACCAGAATTCCTGGGTTTGGAAACACATCTGGCATCGA
ATGGCTGGATCCTTATGTGCATGGACCTGGTATCTACTTCTTCCCTTTGG
TGGATTCATTAACCAGATTGCTGGGTTATGAGCGTGGAAAAACTTTACGA
TCTGCTCCGTATGACTTCCGCTACCATCCTGGTAAGATGTTATTCATTTA
CTTCATCTTTTCTTCTAGTTGGGAttttttaatggattttttGTATGTGA
CTGTATGGTTTATTATGAGtgtcaattttcttgaaaatcatTGTTACATG
ATGATACATCAAATCGGCGACcattaaattgttttaaaagaattttgtaT
AAGGCTTATTTTGATATGACATTTAGATAgcaataagaaaatttgaaatt
cgaaaTCTTTCAGGAGATGCTGGTGATTATTTTGATCGtttgaagaagtt
gattgaAGAGACGTACATGATGAATGGAGAGAAGAAGATTATGTTGCTTT
CTCATAGCATGGGTGTTCCTTACTCCCTCAACTTTCTTCATCGACAAACT
GAAGaatggaaagaaaaatatatcgTGGCATGGACCACTATTTCTGGTAT
GAACAGTTCCACTTTTATTTGATGTTCGCcacttttatttgaaatattga
aagttCTTTCGTCTCAGACGTATTGTAAATAGGCTTTTCTAAAGCTTCAA
GAATGTGCTAATTTGTTGTgtaaaaattttgctttgatcactgtattcat
gatatgcaccattgcaatgtcatccgttccacccaatagctgattggttg
aaagtgacgtattgactgcttttacgtcacttccaaccaatgagctattg
gttccatgacgtaatgtcagaagacattgcactggtgcatatcatgaata
tcatgttCATTCATAAACAAAAACAGATGAACTTATTCGTTACAGTGGCT
TCTAGCTATTATAAAGATTGGCTCATACTCTTCTGCTTATTTCTTCCTCG
TCTTGGTGGTCCAGGTCTTAAACATGATGACATCATAACCTTTCCCACGT
GGCATTAGTGTATTACAAAGAGGATATTATTTTAGTGTTGAAGAAGGATT
AACCTCGAATTTTGTTGGATCTAACCGCATGCAATGTAGCTTCCTCAAAT
TTTGTAATgtaatctattcatgatatacacaattgcaatgtcttctgaca
ttacatcacggacccaattagctgattggttgtaagtgacgtaaaatcag
tcaatacgtcaccttcaaccaatcagctgttgggtccgtggaagacattg
caatggtgcatatcatgaattcagcTTGCCTTCTCGCACATGCgtggtcg
ttacttgaccttgGGTAATATTTCTCAATACACCCCTCACTAactggtca
ttattgtattagtgtATATTCTTTTTAGGTGTATTCGGAGGTTCTATGAA
AGCTGTGAAAGCGTTCATATCTGGTGATGGATTTGGTATTCCCAAAGTGC
TTGATTATCCAATCACATTGCGAGCTTTTCAACGAACATTCAGTAGTTTA
CCTTACATCCTTCCTGATGAAAGTTTTTGGGCCAAGGATGAGGTGTGTAT
AGTCTTTATGCCAATAGAAATTTCAGACGGTCTTTGATTTTCACTGCTGC
AAAAGAATTTACATAATTCTACTGAGCAGTCTTTGAGCTTTCTTATTTGT
AGCTTTTCGGCACATCATTTCACTAGAGCACTGAATTATTCGAAGTGATA
TACATCAAGTATTAATTTGCTTAGTACGACTCATTTTGTAAAAGATAGCG
AGGTTAATTATTGATAGATATTTTGCGACGACGAATTTAGTTTCCCCTAA
GCCTTCATTTATGCTATTTTGTACAGTTTATCCCAAAAAGAAGATAGACT
TGCCCTAAAAATCAACTTTGGTGCTAGAGCGAATTTCCgctttatttttc
gttttcaaagCAAAGTGTGTAGACTACGTGAGGAAAGTCTACTTTGCTTT
CCTACTTACCGCGAACGAAGGGCATATGAAGCCCGTTCGTCGTCGCGAAA
TATCTACCGATACTATTATGTATCACTATATGTCTTTCTCACAGATTATC
TTTTTCCCTAACAATCTTTCGTACTTTCATCCAGGTAATCGTCAAAACGT
CGAATCGGACATACACAGTACACCAATACGACGACCTCTTCAAAGACATG
GGTTATCCGCTAGCAAGTAAAATCTATGCAAAGACTCCTAAAGCGTGGTC
AGAAAAACCTCCTAACgtcaaaatgttttgttttcacgGGAGTGGTAAGG
ACACTCCCGGTGTTTTGAATTACCGAGAAGGATATTTTCCGAATTACACA
CCGGACATAACAATTGATGATGGGGATGGGACGGTGAACTTGCGGAGTCT
TCAAGCGTGTCAGTTGTGGagggaaaaacaaaaacaaccaaTAATTTATG
AAGAATTTTCTAGAGGTGAGCATAATGGTGTTTTGGGTGACGCTCGGCTC
ATCAGGTCCATCATTAAAGCTCTTAGTGAAGATTGATAGTCTCATATCTT
TAATACATTTGTGTAAATTCATTTTAATCTATATACCGTACTTCactatt
attttaacattttttgttgtttagtATTTAAAACATGTAGTATATTTTTA
GTCAGTATTGTCTACtttttgaaaacgttttaaATGGACGGACCATTGTG
TAAATAAGCAGGAATTTTCTAtcatagaaaaatatatttttaaacgaACT
TTCCAAAGTTTTCTCTCAACTAAAGTTTTTATTCGTCATAAGTTATTAAA
TACTCAGAAGATTTGAATTGTGACATGCATTTTCCAACAACACTGAacgt
aattttcaaaataaacattttgttgactaaaaatttgttttgaatagAAG
AACAAAGTATTGCACGAAAGTCACATAAGCTGCCTCCTTCATTGTCAAAA
ATTATATACGGTCTAAAGgtttggggacacgagaagtttttttcgcgttg
gtgcaatgcaacatgctccatcccaacAACATNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNctg
gtgcatatcatgaatatcatgttCATTCATAAACAAAAACAGATGAACTT
ATTCGTTACAGTGGCTTCTAGCTATTATAAAGATTGGCTCATACTCTTCT
GCTTATTTCTTCCTCGTCTTGGTGGTCCAGGTCTTAAACATGATGACATC
ATAACCTTTCCCACGTGGCATTAGTGTATTACAAAGAGGATATTATTTTA
GTGTTGAAGAAGGATTAACCTCGAATTTTGTTGGATCTAACCGCATGCAA
TGTAGCTTCCTCAAATTTTGTAATgtaatctattcatgatatacacaatt
gcaatgtcttctgacattacatcacggacccaattagctgattggttgta
agtgacgtaaaatcagtcaatacgtcaccttcaaccaatcagctgttggg
tcctcggaagacattgcaatggtgcatatcatgaattcagcTTGCCTTCT
CGCACATGCgtggtcgttacttgaccttgGGTAATATTTCTCAACACACC
CCTCACTAactggtcattattgtattagtgtATATTCTTTTTAGGTGTAT
TCGGAGGTTCTATGAAAGCTGTGAAAGCGTTCATATCTGGTGATGGATTT
GGTATTCCCAAAGTGCTTGATTATCCAATCACATTGCGAGCTTTTCAACG
AACATTCAGTAGTTTACCTTACATCCTTCCTGATGAAAGTTTTTGGGCCA
AGGATGAGGTGTGTATAGTCTTTATGCCAATAGAAATTTCAGACGGTCTT
TGATTTTCACTGCTGCAAAAGAATTTACATAATTCTACTGAGCAGTCTTT
GAGCTTTCTTATTTGTAGCTTTTCGGCACATCATTTCACTAGAGCACTGA
ATTATTCGAAGTGATATACATCAAGTATTAATTTGCTTAGTACGACTCAT
TTTGTAAAAGATGGCGAGGTTAATTATTGATAGATATTTTGCGACGACGA
ATTTAGTTTCCCCTAAGCCTTCATTTATGCTATTTTGTACAGTTTATCCC
AAAAAGAAGATAGACTTGCCCTAAAAATCAACTTTGGTGCTAGAGCGAAT
TTCCgttttatttttcgttttcaaagCAAAGTGTGTAGACTACGTGAGGA
AAGCCTACCTTACTTTCCTACTTAGCGCGAACGAAGGCCATGTGAAGCCC
GTTCGTCGTCGCGAAATATCTACCGATACTATTATGTATCACTATATGTC
TTTCTCACAGATTATCTTTTTCCCTAACAACCTTTCGTACTTTCATCCAG
GTCATCGTGAAAACGTCGAATCGGACATACACAGTACACCAATACGACGA
CCTCTTCAAAGACATGGGTTATCCTCTAGCAAGTAAAATCTATGCAAAGA
CTCCTAAAGCGTGGTCAGAAAAACCTCCTAACgtcaaaatgttttgtttt
cacgGGAGTGGTAAGGACACTCCCGGTGTTTTGAATTACCGAGAAGGATA
TTTTCCGAATTACACACCGGACATAACAATTGATGATGGGGATGGGACGG
TGAACTTGCGGAGTCTTCAAGCGTGTCAGTTGTGGagggaaaaacaaaaa
caaccaaTAATTTATGAAGAATTTTCTAGAGGTGAGCATAATGGTGTTTT
GGGTGACGCTCGGCTCATCAGGTCCATCATTAAAGCTCTTAGTGAAGATT
GATAGTCTCATATCTTTAATACATTTGTGTAAATTCATTTTAATCTATAT
ACCGTACTTCactattattttaacattttttgttgtttagtATTTAAAAC
ATGTAGTATATTTTTAGTCAGTATTGTCTACtttttgaaaacgttttaaA
TGGACGGACCATTGTGTAAATAAGCAGGAATTTTCTAtcatagaaaaata
tatttttaaacgaACTTTCCAAAGTTTTCTCTC Coding sequence (CDS) from alignment at sc0000018:811203..816885+ >TCONS_00002071 ID=TCONS_00002071|Name=TCONS_00002071|organism=Clytia hemisphaerica|type=CDS|length=4710bp|location=Sequence derived from alignment at sc0000018:811203..816885+ (Clytia hemisphaerica) ATGGAAAATACTGAAGGTGTTTTCACCAGAATTCCTGGGTTTGGAAACAC ATCTGGCATCGAATGGCTGGATCCTTATGTGCATGGACCTGGTATCTACT TCTTCCCTTTGGTGGATTCATTAACCAGATTGCTGGGTTATGAGCGTGGA AAAACTTTACGATCTGCTCCGTATGACTTCCGCTACCATCCTGGAGATGC TGGTGATTATTTTGATCGtttgaagaagttgattgaAGAGACGTACATGA TGAATGGAGAGAAGAAGATTATGTTGCTTTCTCATAGCATGGGTGTTCCT TACTCCCTCAACTTTCTTCATCGACAAACTGAAGaatggaaagaaaaata tatcgTGGCATGGACCACTATTTCTGGTGTATTCGGAGGTTCTATGAAAG CTGTGAAAGCGTTCATATCTGGTGATGGATTTGGTATTCCCAAAGTGCTT GATTATCCAATCACATTGCGAGCTTTTCAACGAACATTCAGTAGTTTACC TTACATCCTTCCTGATGAAAGTTTTTGGGCCAAGGATGAGGTAATCGTCA AAACGTCGAATCGGACATACACAGTACACCAATACGACGACCTCTTCAAA GACATGGGTTATCCTCTAGCAAGTAAAATCTATGCAAAGACTCCTAAAGC GTGGTCAGAAAAACCTCCTAACgtcaaaatgttttgttttcacgGGAGTG GTAAGGACACTCCCGGTGTTTTGAATTACCGAGAAGGATATTTTCCGAAT TACACACCGGACATAACAATTGATGATGGGGATGGGACGGTGAACTTGCG GAGTCTTCAAGCGTGTCAGTTGTGGagggaaaaacaaaaacaaccaaTAA TTTATGAAGAATTTTCTAGAGGTGAGCATAATGGTGTTTTGGGTGACGCT CGGCTCATCAGGTCCATCATTAAAGCTCTTAGTGAAGATTGAATGGAAAA TACTGAAGGTGTTTTCACCAGAATTCCTGGGTTTGGAAACACATCTGGCA TCGAATGGCTGGATCCTTATGTGCATGGACCTGGTATCTACTTCTTCCCT TTGGTGGATTCATTAACCAGATTGCTGGGTTATGAGCGTGGAAAAACTTT ACGATCTGCTCCGTATGACTTCCGCTACCATCCTGGAGATGCTGGTGATT ATTTTGATCGtttgaagaagttgattgaAGAGACGTACATGATGAATGGA GAGAAGAAGATTATGTTGCTTTCTCATAGCATGGGTGTTCCTTACTCCCT CAACTTTCTTCATCGACAAACTGAAGaatggaaagaaaaatatatcgTGG CATGGACCACTATTTCTGGTGTATTCGGAGGTTCTATGAAAGCTGTGAAA GCGTTCATATCTGGTGATGGATTTGGTATTCCCAAAGTGCTTGATTATCC AATCACATTGCGAGCTTTTCAACGAACATTCAGTAGTTTACCTTACATCC TTCCTGATGAAAGTTTTTGGGCCAAGGATGAGGTAATCGTCAAAACGTCG AATCGGACATACACAGTACACCAATACGACGACCTCTTCAAAGACATGGG TTATCCTCTAGCAAGTAAAATCTATGCAAAGACTCCTAAAGCGTGGTCAG AAAAACCTCCTAACgtcaaaatgttttgttttcacgGGAGTGGTAAGGAC ACTCCCGGTGTTTTGAATTACCGAGAAGGATATTTTCCGAATTACACACC GGACATAACAATTGATGATGGGGATGGGACGGTGAACTTGCGGAGTCTTC AAGCGTGTCAGTTGTGGagggaaaaacaaaaacaaccaaTAATTTATGAA GAATTTTCTAGAGGTGAGCATAATGGTGTTTTGGGTGACGCTCGGCTCAT CAGGTCCATCATTAAAGCTCTTAGTGAAGATTGAATGGAAAATACTGAAG GTGTTTTCACCAGAATTCCTGGGTTTGGAAACACATCTGGCATCGAATGG CTGGATCCTTATGTGCATGGACCTGGTATCTACTTCTTCCCTTTGGTGGA TTCATTAACCAGATTGCTGGGTTATGAGCGTGGAAAAACTTTACGATCTG CTCCGTATGACTTCCGCTACCATCCTGGAGATGCTGGTGATTATTTTGAT CGtttgaagaagttgattgaAGAGACGTACATGATGAATGGAGAGAAGAA GATTATGTTGCTTTCTCATAGCATGGGTGTTCCTTACTCCCTCAACTTTC TTCATCGACAAACTGAAGaatggaaagaaaaatatatcgTGGCATGGACC ACTATTTCTGGTGTATTCGGAGGTTCTATGAAAGCTGTGAAAGCGTTCAT ATCTGGTGATGGATTTGGTATTCCCAAAGTGCTTGATTATCCAATCACAT TGCGAGCTTTTCAACGAACATTCAGTAGTTTACCTTACATCCTTCCTGAT GAAAGTTTTTGGGCCAAGGATGAGGTAATCGTCAAAACGTCGAATCGGAC ATACACAGTACACCAATACGACGACCTCTTCAAAGACATGGGTTATCCTC TAGCAAGTAAAATCTATGCAAAGACTCCTAAAGCGTGGTCAGAAAAACCT CCTAACgtcaaaatgttttgttttcacgGGAGTGGTAAGGACACTCCCGG TGTTTTGAATTACCGAGAAGGATATTTTCCGAATTACACACCGGACATAA CAATTGATGATGGGGATGGGACGGTGAACTTGCGGAGTCTTCAAGCGTGT CAGTTGTGGagggaaaaacaaaaacaaccaaTAATTTATGAAGAATTTTC TAGAGGTGAGCATAATGGTGTTTTGGGTGACGCTCGGCTCATCAGGTCCA TCATTAAAGCTCTTAGTGAAGATTGAATGGAAAATACTGAAGGTGTTTTC ACCAGAATTCCTGGGTTTGGAAACACATCTGGCATCGAATGGCTGGATCC TTATGTGCATGGACCTGGTATCTACTTCTTCCCTTTGGTGGATTCATTAA CCAGATTGCTGGGTTATGAGCGTGGAAAAACTTTACGATCTGCTCCGTAT GACTTCCGCTACCATCCTGGAGATGCTGGTGATTATTTTGATCGtttgaa gaagttgattgaAGAGACGTACATGATGAATGGAGAGAAGAAGATTATGT TGCTTTCTCATAGCATGGGTGTTCCTTACTCCCTCAACTTTCTTCATCGA CAAACTGAAGaatggaaagaaaaatatatcgTGGCATGGACCACTATTTC TGGTGTATTCGGAGGTTCTATGAAAGCTGTGAAAGCGTTCATATCTGGTG ATGGATTTGGTATTCCCAAAGTGCTTGATTATCCAATCACATTGCGAGCT TTTCAACGAACATTCAGTAGTTTACCTTACATCCTTCCTGATGAAAGTTT TTGGGCCAAGGATGAGGTAATCGTCAAAACGTCGAATCGGACATACACAG TACACCAATACGACGACCTCTTCAAAGACATGGGTTATCCTCTAGCAAGT AAAATCTATGCAAAGACTCCTAAAGCGTGGTCAGAAAAACCTCCTAACgt caaaatgttttgttttcacgGGAGTGGTAAGGACACTCCCGGTGTTTTGA ATTACCGAGAAGGATATTTTCCGAATTACACACCGGACATAACAATTGAT GATGGGGATGGGACGGTGAACTTGCGGAGTCTTCAAGCGTGTCAGTTGTG GagggaaaaacaaaaacaaccaaTAATTTATGAAGAATTTTCTAGAGGTG AGCATAATGGTGTTTTGGGTGACGCTCGGCTCATCAGGTCCATCATTAAA GCTCTTAGTGAAGATTGAATGGAAAATACTGAAGGTGTTTTCACCAGAAT TCCTGGGTTTGGAAACACATCTGGCATCGAATGGCTGGATCCTTATGTGC ATGGACCTGGTATCTACTTCTTCCCTTTGGTGGATTCATTAACCAGATTG CTGGGTTATGAGCGTGGAAAAACTTTACGATCTGCTCCGTATGACTTCCG CTACCATCCTGGAGATGCTGGTGATTATTTTGATCGtttgaagaagttga ttgaAGAGACGTACATGATGAATGGAGAGAAGAAGATTATGTTGCTTTCT CATAGCATGGGTGTTCCTTACTCCCTCAACTTTCTTCATCGACAAACTGA AGaatggaaagaaaaatatatcgTGGCATGGACCACTATTTCTGGTGTAT TCGGAGGTTCTATGAAAGCTGTGAAAGCGTTCATATCTGGTGATGGATTT GGTATTCCCAAAGTGCTTGATTATCCAATCACATTGCGAGCTTTTCAACG AACATTCAGTAGTTTACCTTACATCCTTCCTGATGAAAGTTTTTGGGCCA AGGATGAGGTAATCGTCAAAACGTCGAATCGGACATACACAGTACACCAA TACGACGACCTCTTCAAAGACATGGGTTATCCTCTAGCAAGTAAAATCTA TGCAAAGACTCCTAAAGCGTGGTCAGAAAAACCTCCTAACgtcaaaatgt tttgttttcacgGGAGTGGTAAGGACACTCCCGGTGTTTTGAATTACCGA GAAGGATATTTTCCGAATTACACACCGGACATAACAATTGATGATGGGGA TGGGACGGTGAACTTGCGGAGTCTTCAAGCGTGTCAGTTGTGGagggaaa aacaaaaacaaccaaTAATTTATGAAGAATTTTCTAGAGGTGAGCATAAT GGTGTTTTGGGTGACGCTCGGCTCATCAGGTCCATCATTAAAGCTCTTAG TGAAGATTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00002071-exon-sc0000018-1491911889:811203..811533 | TCONS_00002071-exon-sc0000018-1491911889:811203..811533 | Clytia hemisphaerica | exon |
TCONS_00002071-exon-sc0000018-1510915933:811203..811533 | TCONS_00002071-exon-sc0000018-1510915933:811203..811533 | Clytia hemisphaerica | exon |
TCONS_00002071-exon-sc0000018-1575043694:811203..811533 | TCONS_00002071-exon-sc0000018-1575043694:811203..811533 | Clytia hemisphaerica | exon |
TCONS_00002071-exon-sc0000018-1491911889:811766..811948 | TCONS_00002071-exon-sc0000018-1491911889:811766..811948 | Clytia hemisphaerica | exon |
TCONS_00002071-exon-sc0000018-1510915933:811766..811948 | TCONS_00002071-exon-sc0000018-1510915933:811766..811948 | Clytia hemisphaerica | exon |
TCONS_00002071-exon-sc0000018-1575043694:811766..811948 | TCONS_00002071-exon-sc0000018-1575043694:811766..811948 | Clytia hemisphaerica | exon |
TCONS_00002071-exon-sc0000018-1491911889:812781..812944 | TCONS_00002071-exon-sc0000018-1491911889:812781..812944 | Clytia hemisphaerica | exon |
TCONS_00002071-exon-sc0000018-1510915933:812781..812944 | TCONS_00002071-exon-sc0000018-1510915933:812781..812944 | Clytia hemisphaerica | exon |
TCONS_00002071-exon-sc0000018-1575043694:812781..812944 | TCONS_00002071-exon-sc0000018-1575043694:812781..812944 | Clytia hemisphaerica | exon |
TCONS_00002071-exon-sc0000018-1491911889:813487..813512 | TCONS_00002071-exon-sc0000018-1491911889:813487..813512 | Clytia hemisphaerica | exon |
TCONS_00002071-exon-sc0000018-1510915933:813487..813512 | TCONS_00002071-exon-sc0000018-1510915933:813487..813512 | Clytia hemisphaerica | exon |
TCONS_00002071-exon-sc0000018-1575043694:813487..813512 | TCONS_00002071-exon-sc0000018-1575043694:813487..813512 | Clytia hemisphaerica | exon |
TCONS_00002071-exon-sc0000018-1491911889:816279..816885 | TCONS_00002071-exon-sc0000018-1491911889:816279..816885 | Clytia hemisphaerica | exon |
TCONS_00002071-exon-sc0000018-1510915933:816279..816885 | TCONS_00002071-exon-sc0000018-1510915933:816279..816885 | Clytia hemisphaerica | exon |
TCONS_00002071-exon-sc0000018-1575043694:816279..816885 | TCONS_00002071-exon-sc0000018-1575043694:816279..816885 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
sc0000018 | supercontig | sc0000018:811203..816885 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
Term | Definition |
GO:0008374 | O-acyltransferase activity |
Vocabulary: Biological Process
Term | Definition |
GO:0006629 | lipid metabolic process |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category |
Term Accession |
Term Name |
biological_process |
GO:0006629 |
lipid metabolic process |
molecular_function |
GO:0008374 |
O-acyltransferase activity |
Blast
BLAST of TCONS_00002071 vs. Swiss-Prot (Human)
Match: PAG15 (Group XV phospholipase A2 OS=Homo sapiens GN=PLA2G15 PE=1 SV=2) HSP 1 Score: 195.282 bits (495), Expect = 9.866e-57 Identity = 117/322 (36.34%), Postives = 179/322 (55.59%), Query Frame = 1
Query: 106 FRLTYNEKEDRMENTEGVFTRIPGFGNTSGIEWLDPYVHGPGIYFFPLVDSLTRLLGYERGKTLRSAPYDFRYHPGDAGDYFDRLKKLIEETYMMNGEKKIMLLSHSMGVPYSLNFLHRQTEEWKEKYIVAWTTISGVFGGSMKAVKAFISGDGFGIPKVLDYPITLRAFQRTFSSLPYILPDESFWAKDEVIVKTSNRTYTVHQYDDLFKDMGYPLASKIYAKTPK-AWSEKPPNVKMFCFHGSGKDTPGVLNYREGYFPNYTPXXXXXXXXXXVNLRSLQACQLWREKQKQPIIYEEFSRGEHNGVLGDARLIRSIIKAL 1068
RL YN+ + +GV R+PGFG T +E+LDP G YF +V+SL GY RG+ +R APYD+R P + G YF L+++IEE Y + G ++L++HSMG Y+L FL RQ + WK+KYI A+ ++ +GG K ++ SGD IP + P+ +R QR+ S ++LP W+ ++V V+T YT+ Y F+D+G+ + T + PP V++ C +G+G TP Y FP+ P I DGDGTVNL+S CQ W+ +Q+ ++ +E EH +L +A + + + L
Sbjct: 94 IRLVYNKTSRATQFPDGVDVRVPGFGKTFSLEFLDPSKSSVGSYFHTMVESLVGW-GYTRGEDVRGAPYDWRRAPNENGPYFLALREMIEEMYQLYG-GPVVLVAHSMGNMYTLYFLQRQPQAWKDKYIRAFVSLGAPWGGVAKTLRVLASGDNNRIPVI--GPLKIREQQRSAVSTSWLLPYNYTWSPEKVFVQTPTINYTLRDYRKFFQDIGFEDGWLMRQDTEGLVEATMPPGVQLHCLYGTGVPTPDSFYYES--FPDRDPKICFGDGDGTVNLKSALQCQAWQSRQEHQVLLQELPGSEHIEMLANATTLAYLKRVL 409
The following BLAST results are available for this feature:
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