TCONS_00002063 (transcript) - C. hemisphaerica

Overview
NameTCONS_00002063
Unique NameTCONS_00002063
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2423

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00002063 ID=TCONS_00002063|Name=TCONS_00002063|organism=Clytia hemisphaerica|type=transcript|length=2423bp
gtttcagtgtaaataattttcatttaaacTGTCAGCCGGATTGATTATAG
CTGCTGATTCATTTCAAAAAGAgtaaagatttgtaaacaaaaaagagaCA
ATGCTATTTGTTGCTTATTGATATTCAAAAGTTGAGGATGTTTTTGCAAT
GATTAATCCAAGCAATGCGTTGAAGGATGGTCCAGTACGTCGAGCATGAC
ACACTAGTTAATGAACTTGTAACTCTCGAGAATTTCTCACCAGAAGACCG
ACTAGCTCATGCCAGGAAAAGACGTCATGAACAGATCAAATCTTATGACA
GCCGGGAAACCAATCCAAATGCGTACCCTCCTGTGCATGCTAGTCACAAC
AAACGAATTCGTTTTGATAAAAACATCGAATTGATTGAAGCTGCTTCACG
GAATGATTCTGATGAAGTCGAGCATCTATTAACACAAGCAGGAGTGAGTG
CAGACCTACAAAATGAAGATGGCTTGAGTGCACTACATCAAGCGGTAATC
GAAGACTGTCAGGATGTTGTAGAAACGCTAATAAGACATGGAGCTGACCT
TGACATCAAAGATGCCGACCTGTGGACGCCTCTCCACGCTGCTGTAGCCT
GTGGGAATCTTGATTTAGTGAAATACTTGGTGGAGAAAGGAGCCAGTCTA
GTGGAGATCAACACGGATGGAAATATGGCTATCGACCTTGTTGAAGATAT
GGAAGAAATTGAGATCTTCCTCGATGAAGCAATGGCTGGCAAAGGTTATG
ACGAAGAAGGGCTGGAGCAAATTCGAAACGAAACAGCCACTCTCATGTTG
GACGAATTGAGAGAAGCGGCGCAACAAAATTCATATGATTTCAATGTTCA
AGGTTCACATGGAGAAACTGTCATGCACATAGCAGCAGCAAATGGTTACG
ATCAGGTGGTGGAATATTTATTGGATCACGGAGCTAAAATAAGTGTTGTC
GACCACGATGCATGGCAACCTATTCACGCGGCCGCTTGCTGGGGTCACGA
CAAAATCATCGAGATTCTTGTGAACCATGGTGCAGATTTGGATGCACTGA
CAAAGGATGGTGAAACTCCTTTTGaTTTGACGGAGGACGAAGATCTGCAG
GGGATGATTATCGAACTCAAAGAGTCTGGAACCAAATCACATAAATTGAA
ACGAAGTCAAAGCAATAGCTCCAGAACatTATCCGTGCGTCGAACGAGCA
TCGTCGAAAAGCACAAAATTTCCGTCAACGACGCTAAACAAGAGGGAATA
TTCCGTCAAAATCCTGACTTCTTACACGTCGTTATCAACACGGgcgagga
agaagaagaagaagaaacgcGGAAAGGGGAAACCACCtcaaacaacaaag
aaaatcTCTCTTCACCTGATGAAAAACAGCCTGCTCAACCATCACAGCCT
CCAGTTGTGGTCGCTCCGTCACCTCCACAACAACCTACCGAAGCAGAACA
ACAGCAGAAACAAAGCGAAGGTTCAGTATCGGTCAACTTATCAACCGGGG
TACATTACAAAGCGGTGGAACAAAAGATTTCCATTGAGAGTGATaccgaa
agtgaaagtgccaCTAATCACGTGACCAAAGCGAATAACACGCTGTCTAA
CGGAGGAGTCTCAGCCGATACGTATCCGGAAGGGCGGTATACGAAACTGG
CGGCCGACTCAACGCCCCAACCAAATACGGACTCATCTCAGATTGTTTTA
GAATTGGGTGATGGCGGACAACACTCTCACAACACGGCTGTGCAAAACCA
TGATAAAGAACTTCAACAATCGACTGATATGAGTGTCAAAAAGAAATGTT
GTGTAATTTTATGATTCATTCTATGATCATATTTTATTGGATAATTCATG
GTGCCTGGTTGCCATGTTAGATAATGACGTCATGTTTAGTTCACCACGGT
GGATATTTTAATGCGAATTCGACTGAGAAAATCACAGATAATCACATTTT
TGGATGGAAtggaactttttagaaatattttaatttaactGATCAGATGA
TTGTTTCCTGATTTTATTCTCTCGATtttaataaaatgacaaaatctgcg
acaaaattaatttaaagCTTTTCACTTAAGCAAACCTGAGGGAAATAAAG
AGACCATTAAAATAAGTAACCTATTTTTACTGAAAACAGTCTTCtttaaa
tacattttttatgttgggaattttttttttttgataaactgCTTGTCTAC
TTGTTCTCATATatttaaactttattttttcgtaaatttttcaaaaattt
ttgttagGTGAGATTTTTAACCGACAATTAAGTTATATAACAACTTTTAA
TTTATTGCTTcccattgtttttcttttgcaaATGTTTCAACTTATTGCtc
agaatcaaatcaataaatcaTTTAAGCAATCCCTGTGGTCCACTGACCAA
CTGATAACTCCCAATTATGTAAC
Run BLAST on NCBI

transcript from alignment at sc0000018:731142..741070+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00002063 ID=TCONS_00002063|Name=TCONS_00002063|organism=Clytia hemisphaerica|type=transcript|length=9929bp|location=Sequence derived from alignment at sc0000018:731142..741070+ (Clytia hemisphaerica)
gtttcagtgtaaataattttcatttaaacTGTCAGCCGGATTGATTATAG
CTGCTGATTCATTTCAAAAAGAgtaaagatttgtaaacaaaaaagagaCA
ATGCTATTTGTTGCTTATTGATATTCAAAAGTTGAGGATGTTTTTGCAAT
GATTAATCCAAGCAATGCGTTGAAGGATGGTCCAGTACGTCGAGCATGAC
ACACTAGTTAATGAACTTGTAACTCTCGAGAATTTCTCACCAGAAGACCG
ACTAGCTCATGCCAGGAAAAGACGTCATGAACAGATCAAATCTTATGACA
GCCGGGAAACCAATCCAAATGCGTACCCTCCTGTGCATGCTAGTCACAAC
AAACGAATTCGTTTTGATAAAAACATCGAATTGATTGAAGCTGCTTCACG
GAATGATTCTGATGAAGGTTTGTTTGTAACACCTTAGGGTGGGGCCTGCC
CATTTAGCATATTGCTTTACCTCTATGCTATATTGTCGACTCTTCTTTTA
TAGTTGTGGCTTCTACCtcattacacgaatattactagtcattttattaa
cacaaattgaaaatttcgtgtttataaaaacccccttaattaaaaccagc
cgttgtttccttgaaaaagcagaaaattttaagttaaaatttcagatcac
gtgcaaatttcaaggccgttgaatacttacctagtaatatttgtgtaata
aggtattccAATTAGGAATAAAATGCCACTGTATACAACAGTTTAACACA
ACACTTGAAGTGTCTTAATTTGAGTTGACATTTCGTTTTCAGTCGAGCAT
CTATTAACACAAGCAGGAGTGAGTGCAGACCTACAAAATGAAGATGGCTT
GAGTGCACTACATCAAGTAAGTTAATATTACCCTTTCATTGGACGAGATT
CTTTAGAAGTTATTATCGTAAAGTTTGGCTTCTTGTATACAATGACAGGC
TATTTCTATAAAACGAATTGTACAAGACATCTACGTAGTTCAAActtctt
tcaaaatgtttgaAAGATTAATTTGACCAATCCCACGCTACTACTATTTC
AAACTGTGGTTCAGTCTTGTTTTTGAGTGCCCCATATCACTTAGCTATTT
GCTAGCCATATAAGTCATAAAATTTAGGGAAAATAGCAATAGACTTTGAA
CTAGGGTTAAAAAGAGCTATTACCCAGATGATAGTGAATGAACTAAAGAt
ttgttttcatattttctgAAGGCGGTAATCGAAGACTGTCAGGATGTTGT
AGAAACGCTAATAAGACATGGAGCTGACCTTGACATCAAAGATGCCGACC
TGTGGACGCCTCTCCACGCTGCTGTNAGACATGGAGCTGACCTTGACATC
AAAGATGCCGACCTGTGGACGCCTCTCCACGCTGCTGTAGCCTGTGGGAA
TCTTGATTTAGTGAAATACTTGGTGGAGAAAGGAGCCAGTCTAGTGGAGA
TCAACACGGATGGAAATATGGCTATCGACCTTGTTGAAGATATGGAAGAA
ATTGAGATCTTCCTCGATGAAGCAATGGCTGGCAAAGGTTGGTAGTTTGT
AATTAATGACATGTATTTCTTTGAATTCGGACTTTTTGTCAATCCTTTCT
TCCTGAGGGGTCCCCCTTTCTTGCTTTGTCCCCCTCCCAACCCACTTCCT
TTTCCCAGTTTTTCGGAGGGTGGCATAACCCCTTAGGAAGAGGGTTCAAA
GGGGGTATTCATCATCTCAAAGAAAACACTATTTTATAAGTGTTAGGGAG
GATAATATTGAGCATGAGATCCTTCTCAGTCTTTATAGAACTCTCCCAGC
TCATAGAATGACAGTATGTAAAGAGGGATTTTGCTTAAGCTCAGAAAATG
CTTCAGTGGTTTATTTGGATagtcatagtgcggaaaggggtctgaccccc
cttcttaaacgaccccccccccttcttggcatcccccaacctttaaaaat
gcctatcccccaaggttTTCgggctaaattttttatggtaaaaagggaag
ggaaacagtaaagaaaaattaagtctggcaaatataataccactttttag
ataaaataaagaacttcctttcatgcagaccaaatttcataacagtgctg
gaaaattaTCTACAATAATATTTAATCCCCCGCcccctttttagtgaaaa
tttctgacccccccccccttcttcacttttttggaagggggggggggttc
cgaACTATGATAGTAAACAAGAGATTTACATTATTGAACGCTGTCTTTTA
AGGTTATGACGAAGAAGGGCTGGAGCAAATTCGAAACGAAACAGCCACTC
TCATGTTGGACGAATTGAGAGAAGCGGCGCAACAAAATTCATATGATTTC
AATGTTCAAGGTTCACATGGAGAAACTGTCGTAAGTGGAATCTCAAATAA
ATTAGATTTCGTCCCTAGTGATTTATCTCTGTATTAAAGCAGTTTGATCA
CAAAGAGTGCAGAATTTTTGTTgtggaaaagtttgaaattaattttcaat
gGGGAGCATGCTTTCGTTCTGCTTTTTATATCGTCTTCGTTTGCTTTCGC
TTGTAATTTTTGGTTCCCTTCTCAAAATGCTTAGTTTTTGGTTATTGCCA
TGTATTGTGCGCAGTTAGGTAAACATGTGGCAAACAGATAACAAGAATTT
GATTTGATCAAGTATACAGAAGGACTGTGAAATagattttcttcatttca
gATGCACATAGCAGCAGCAAATGGTTACGATCAGGTGGTGGAATATTTAT
TGGATCACGGAGCTAAAATAAGTGTTGTCGACCACGATGCATGGCAACCT
ATTCACGCGGCCGCTTGCTGGGGTCACGTGAGTATTATGTTATTCGTACA
CCTGACAAGTCTTTCTGGCTCCCATTGTCGCTGAAAGTCTTAAATTAGTG
AACCACCTTTAAAAACATCGGCTTTCACTGTCCTTCGTTTCAACAATTCG
AATTTCGAAtactttaaaaatgatttccttATGACGTTTACCAATACACG
CGTTATAGTTTCTTATGACTCGTTTACCCATACACGATATTGTTTCTTAT
GACTCGTTTACCAATATACGTGTTATCGTTTCTTATGACTCGTTTACCCA
TACACGATATCGTTTCTTATGACTCGTTTACCCATAGACGATATTGTTTC
TTATGACTCGTTTACCCATACACGTTATCGTTtcttttgtctcgtttacc
aaTATACATTATCATTTCAGGACAAAATCATCGAGATTCTTGTGAACCAT
GGTGCAGATTTGGATGCACTGACAAAGGATGGTGAAACTCCTTTTGGTGA
GATTCTTATCTCCTTCATTCTGTCCGGTTTCCCACCGGATAATCCGCCTT
TCTTAGCAACACTTTCATTCAGTATTTTTAGCTCCTGAAGTTTTCGGTTA
CCGTGAAACTAGACGATTTAGTCGGCGACAGttgcaatattttcaaaaat
atgaatttattatgctaaaaacaaaacatatgAGATATACTTACTGGATC
TTTAgccattataaaaacaatgtatTCATGAACCAAAGTGGCctaaacta
tttaaaacatccaagaATGTCCCATTTCTGGATCGCCATTTTGAATCAGT
GCTTTTCTATGAAAACTGCTGCCTCGCTGTTCTTTCAAAACATTAGcttt
tcaaatatcaaaagagagcttaacctttccagcgcgcaacatttttaaaa
aaatctcaaaattttcaactgtttttttgaatcctaaaactttaaaatag
tgttaaagcttgtagcttgaaagttagaaaatggttttggtaccatttgg
aaggtatttttatactctttctaaaagtATTCAGTTTATAcccttttaaa
tcaagtggtcaggagttatagcCTTAGGTCTGAGACTTGGTATATGAGCT
CATTTTGGACGTTTATGTACGTCATTCGGGTCTGAAGGGTAAAAACGTCT
ACTTCCCTTTTCTCTTTACTTTTACGgctagcaaagaagccaatgagaaa
tatagcttagaagatTGCTATGTAAAAAAAACGAATAGGTTAAAACATTT
TGCGTAGATTGAATTTTGAGAATCAGTGATCTGACGTAATTTCGCGGGAT
CTAACATCTGgaaatttcgcgaaattaaattttgtgaaaattaatccggt
taaagtaaaTTGATGTGTCATTTTGAGGCTACAAGTTTTATAAAACACAG
TGAATCTTGGGTGAGTTTTTCTTACCGCTCGTCATATTTTGATCTTTACG
AcgtcttctttttattcagaTTTGACGGAGGACGAAGATCTGCAGGGGAT
GATTATCGAACTCAAAGAGTCTGGAACCAAATCACATAAATTGAAACGAA
GTCAAAGCAATAGCTCCAGAACGTAAGATGAAATTATTGTTACTCAAATA
ACTCAAATAAATTAACGATAAAGTAATTTCTTTACTCAATAAATACATTT
GGTTTCATTCGAAACTTAAGGCTTTATTATACCTGCTATTGCAAGAAAGT
TATTCACtgtaagaaaagtttgaagaaaaagaacttgaaacatcttcaaa
ttttcagggtcacgtgattcaatttttgaattgtttacttttttagatTA
TCCGTGCGTCGAACGAGCATCGTCGAAAAGCACAAAATTTCCGTCAACGA
CGCTAAACAAGAGGGAATATTCCGTCAAAATCCTGACTTCTTACACGTCG
TTATCAACACGGTTCGTTTGATCCTTATCTTTTCTTTGATTATCCTAACc
cttaagaaaaatatttgaaaagtttttcgtagagaaattgaaatttcacC
TGTGACTGATATCGCTAAAAAGTGTGTGGCTAAAAGAATAATATGTGCTT
CAATAGGGAACTTATTTTGTTGGAAACTACTTTGGCGCtacttctttcca
atgaaaggATTACTGTCGCGCAAAAGTACTAGGttcctcgccaaaattaa
tgtttttatgATTTTCTAAAATAACCCCTGATTTTTCCCTCAAACACtca
tttttaggtaaaaaagaAACAACATACCTTGCTATTcgttaaaattaaaa
atgagtTCTTACAGGGTTTACAAGTGTTTAAATATAATACTGtttacaaa
aagtcaaaaacttgtaactttaGTATCGTGCCGAATTTGAAATCACCATT
CTCAAAAGAAAAGTGTGTATTGTACTCTgaccttgatttttttttttcta
catggaATTTCCTCCTTCCCATTCTAGTTTTTTTGCATATAATAATATTG
TGCTAGGATTTCACTTTTTACCAAacctaattaatttttttgcgtTTTCT
TTTGGTGCAGGgcgaggaagaagaagaagaagaaacgcGGAAAGGGGAAA
CCACCtcaaacaacaaagaaaatcTCTCTTCACCTGATGAAAAACAGCCT
GCTCAACCATCACAGCCTCCAGTTGTGGTCGCTCCGTCACCTCCACAACA
ACCTACCGGTATGCTTTTCTCATCTCCTTCGTTAatcctttaattttttc
ttcgaaaagcATTCGTTTTCTGATAATTAATGCAGTGATGTTTATTGCTG
ACTCTCCATTTTGCCCACCGAGGTACTCTAGATTTTACAACCAAAAGTAT
AATTTTATCCGAAATAGAAAATTAACATAATACCGGTCGGTGTTTATTGA
ACCTGGCACAGAAAGGGTCGATAAGGTCATTTATATTACTAAAAGTGACA
AATGAGCTCGTGGAAAGTCAAACCCCCAGCTGTGttaatagatttataaa
aagaagaaagttttaagtTCTGTCTATCATTTAAACTTCTGACTTTTCTT
CCAGAAGCAGAACAACAGCAGAAACAAAGCGAAGGTTCAGTATCGGTCAA
CTTATCAACCGGGGTACATTACAAAGCGGTGGAACAAAAGATTTCCATTG
AGAGTGATaccgaaagtgaaagtgccaCTAATCACGTGACCAAAGCGAAT
AACACGCTGTCTAACGGAGGAGGTNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNTTATGAATTGAGAGTTTATTTG
AGAATACCTACTAATAAGTTTTCCATTATTTCTTCTTTCTCCCAGTCTCA
GCCGATACGTATCCGGAAGGGCGGTATACGAAACTGGCGGCCGACTCAAC
GCCCCAACCAAATACGGACTCATCTCAGATTGTTTTAGAATTGGGTGATG
GCGGACAACACTCTCACAACACGGCTGTGCAAAACCATGATAAAGAACTT
CAACAATCGACTGATATGAGTGTCAAAAAGAAATGTTGTGTAATTTTATG
ATTCATTCTATGATCATATTTTATTGGATAATTCATGGTGCCTGGTTGCC
ATGTTAGATAATGACGTCATGTTTAGTTCACCACGGTGGATATTTTAATG
CGAATTCGACTGAGAAAATCACAGATAATCACATTTTTGGATGGAAtgga
actttttagaaatattttaatttaactGATCAGATGATTGTTTCCTGATT
TTATTCTCTCGATtttaataaaatgacaaaatctgcgacaaaattaattt
aaagCTTTTCACTTAAGCAAACCTGAGGGAAATAAAGAGACCATTAAAAT
AAGTAACCTATTTTTACTGAAAACAGTCTTCtttaaatacattttttatg
ttgggaattttttttttttgataaactgCTTGTCTACTTGTTCTCATATa
tttaaactttattttttcgtaaatttttcaaaaatttttgttagGTGAGA
TTTTTAACCGACAATTAAGTTATATAACAACTTTTAATTTATTGCTTtcc
attgtttttcttttgcaaATGTTTCAACTTATTGCTcggaatcaaatcaa
taaataatttaaGCAATCCCTGTGGTCCACTGACCAACTGATAACTCCCA
ATTATGTAGCTGATAAGAATGGAATTGCTAACCCGGGGGGGGTGTACTTA
GGCTAAATGGGTGtcaggtatgtgcgagccatagaggtccctttttcaca
ccctcatAAGGGTACAAAACCATTAAANAAGACGTCCGTTTCTTAGTTTC
AACTGGTACTTGGAGACCAATTATAAGAATTGAAAGATACATCACCCGAA
TAGTAGCCTTTTTTagtgcctcgttttgaaactatTACATAGGTGATTAA
ATCCCTTCATTCTTCAAGTGTTATACTTGTTAAATAGATTTAACTTATTA
TGAATTGAGAGTTTATTTGAGAATACCTACTAATAAGTTTTCAATTATTT
CTTCTTTCTCCCAGTCTCAGCCGATACGTATCCGGAAGGGCGGTATACGA
AACTGGCGGCCGACTCAACGCCCCAACCAAATACGGACTCATCTCAGATT
GTTTTAGAATTGGGTGATGGCGGACAACACTCTCACAACACGGCTGTGCA
AAACCATGATAAAGAACTTCAACAATCGACTGATATGAGTGTCAAAAAGA
AATGTTGTGTAATTTTATGATTCATTCTATGATCATATTTTATTGGATAA
TTCATGGTGCCTGGTTGCCATGTTAGATAATGACGTCATGTTTAGTTCAC
CACGGTGGATATTTTAATGCGAATTCGACTGAGAAAATCACAGATAATCA
CATTTTTGGATGGAAtggaactttttagaaatattttaatttaactGATC
AGATGATTGTTTCCTGATTTTATTCTCTCGATtttaataaaatgacaaaa
tctgcgacaaaattaatttaaagCTTTTCACTTAAGCAAACCTGAGGGAA
ATAAAGAGACCATTAAAATAAGTAACCTATTTTTACTGAAAACAGTCTTC
tttaaatacattttttatgttgggaattttttttttttgataaactgCTT
GTCTACTTGTTCTCATATatttaaactttattttttcgtaaatttttcaa
aaatttttgttagGTGAGATTTTTAACCGACAATTAAGTTATATAACAAC
TTTTAATTTATTGCTTcccattgtttttcttttgcaaATGTTTCAACTTA
TTGCtcagaatcaaatcaataaatcaTTTAAGCAATCCCTGTGGTCCACT
GACCAACTGATAACTCCCAATTATGTAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001084XLOC_001084Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00002063-exon-sc0000018-1491911889:731142..731558TCONS_00002063-exon-sc0000018-1491911889:731142..731558Clytia hemisphaericaexon
TCONS_00002063-exon-sc0000018-1510915933:731142..731558TCONS_00002063-exon-sc0000018-1510915933:731142..731558Clytia hemisphaericaexon
TCONS_00002063-exon-sc0000018-1575043694:731142..731558TCONS_00002063-exon-sc0000018-1575043694:731142..731558Clytia hemisphaericaexon
TCONS_00002063-exon-sc0000018-1491911889:731934..732007TCONS_00002063-exon-sc0000018-1491911889:731934..732007Clytia hemisphaericaexon
TCONS_00002063-exon-sc0000018-1510915933:731934..732007TCONS_00002063-exon-sc0000018-1510915933:731934..732007Clytia hemisphaericaexon
TCONS_00002063-exon-sc0000018-1575043694:731934..732007TCONS_00002063-exon-sc0000018-1575043694:731934..732007Clytia hemisphaericaexon
TCONS_00002063-exon-sc0000018-1491911889:732363..732408TCONS_00002063-exon-sc0000018-1491911889:732363..732408Clytia hemisphaericaexon
TCONS_00002063-exon-sc0000018-1510915933:732363..732408TCONS_00002063-exon-sc0000018-1510915933:732363..732408Clytia hemisphaericaexon
TCONS_00002063-exon-sc0000018-1575043694:732363..732408TCONS_00002063-exon-sc0000018-1575043694:732363..732408Clytia hemisphaericaexon
TCONS_00002063-exon-sc0000018-1491911889:732472..732678TCONS_00002063-exon-sc0000018-1491911889:732472..732678Clytia hemisphaericaexon
TCONS_00002063-exon-sc0000018-1510915933:732472..732678TCONS_00002063-exon-sc0000018-1510915933:732472..732678Clytia hemisphaericaexon
TCONS_00002063-exon-sc0000018-1575043694:732472..732678TCONS_00002063-exon-sc0000018-1575043694:732472..732678Clytia hemisphaericaexon
TCONS_00002063-exon-sc0000018-1491911889:733394..733521TCONS_00002063-exon-sc0000018-1491911889:733394..733521Clytia hemisphaericaexon
TCONS_00002063-exon-sc0000018-1510915933:733394..733521TCONS_00002063-exon-sc0000018-1510915933:733394..733521Clytia hemisphaericaexon
TCONS_00002063-exon-sc0000018-1575043694:733394..733521TCONS_00002063-exon-sc0000018-1575043694:733394..733521Clytia hemisphaericaexon
TCONS_00002063-exon-sc0000018-1491911889:733843..733968TCONS_00002063-exon-sc0000018-1491911889:733843..733968Clytia hemisphaericaexon
TCONS_00002063-exon-sc0000018-1510915933:733843..733968TCONS_00002063-exon-sc0000018-1510915933:733843..733968Clytia hemisphaericaexon
TCONS_00002063-exon-sc0000018-1575043694:733843..733968TCONS_00002063-exon-sc0000018-1575043694:733843..733968Clytia hemisphaericaexon
TCONS_00002063-exon-sc0000018-1491911889:734362..734437TCONS_00002063-exon-sc0000018-1491911889:734362..734437Clytia hemisphaericaexon
TCONS_00002063-exon-sc0000018-1510915933:734362..734437TCONS_00002063-exon-sc0000018-1510915933:734362..734437Clytia hemisphaericaexon
TCONS_00002063-exon-sc0000018-1575043694:734362..734437TCONS_00002063-exon-sc0000018-1575043694:734362..734437Clytia hemisphaericaexon
TCONS_00002063-exon-sc0000018-1491911889:735411..735513TCONS_00002063-exon-sc0000018-1491911889:735411..735513Clytia hemisphaericaexon
TCONS_00002063-exon-sc0000018-1510915933:735411..735513TCONS_00002063-exon-sc0000018-1510915933:735411..735513Clytia hemisphaericaexon
TCONS_00002063-exon-sc0000018-1575043694:735411..735513TCONS_00002063-exon-sc0000018-1575043694:735411..735513Clytia hemisphaericaexon
TCONS_00002063-exon-sc0000018-1491911889:735738..735852TCONS_00002063-exon-sc0000018-1491911889:735738..735852Clytia hemisphaericaexon
TCONS_00002063-exon-sc0000018-1510915933:735738..735852TCONS_00002063-exon-sc0000018-1510915933:735738..735852Clytia hemisphaericaexon
TCONS_00002063-exon-sc0000018-1575043694:735738..735852TCONS_00002063-exon-sc0000018-1575043694:735738..735852Clytia hemisphaericaexon
TCONS_00002063-exon-sc0000018-1491911889:736452..736599TCONS_00002063-exon-sc0000018-1491911889:736452..736599Clytia hemisphaericaexon
TCONS_00002063-exon-sc0000018-1510915933:736452..736599TCONS_00002063-exon-sc0000018-1510915933:736452..736599Clytia hemisphaericaexon
TCONS_00002063-exon-sc0000018-1575043694:736452..736599TCONS_00002063-exon-sc0000018-1575043694:736452..736599Clytia hemisphaericaexon
TCONS_00002063-exon-sc0000018-1491911889:736946..737113TCONS_00002063-exon-sc0000018-1491911889:736946..737113Clytia hemisphaericaexon
TCONS_00002063-exon-sc0000018-1510915933:736946..737113TCONS_00002063-exon-sc0000018-1510915933:736946..737113Clytia hemisphaericaexon
TCONS_00002063-exon-sc0000018-1575043694:736946..737113TCONS_00002063-exon-sc0000018-1575043694:736946..737113Clytia hemisphaericaexon
TCONS_00002063-exon-sc0000018-1491911889:740256..741070TCONS_00002063-exon-sc0000018-1491911889:740256..741070Clytia hemisphaericaexon
TCONS_00002063-exon-sc0000018-1510915933:740256..741070TCONS_00002063-exon-sc0000018-1510915933:740256..741070Clytia hemisphaericaexon
TCONS_00002063-exon-sc0000018-1575043694:740256..741070TCONS_00002063-exon-sc0000018-1575043694:740256..741070Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000018supercontigsc0000018:731142..741070 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.23734	1.4545	3.98078	3.30449	7.75844	4.88195	4.52013	5.12932	2.33425	2.22412	1.9429	1.98674	0.708563	0.29434	0.483974	0.584301	1.43962	1.47557	0.339762	0.355537	3.09026	2.86391	1.58803	1.66587	0.686322	1.6334	6.42784	8.73086	5.79429	5.54203
Blast
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BLAST of TCONS_00002063 vs. Swiss-Prot (Human)
Match: PP16A (Protein phosphatase 1 regulatory subunit 16A OS=Homo sapiens GN=PPP1R16A PE=1 SV=1)

HSP 1 Score: 255.373 bits (651), Expect = 9.701e-75
Identity = 145/377 (38.46%), Postives = 222/377 (58.89%), Query Frame = 3 
Query:  186 YVEHDTLVNELVTLENFSPEDRLAHARKRRHEQIKSYDSRET------NPNAYPPVHASHN---KRIRFDKNIELIEAASRNDSDEVEHLLTQAGVSADLQNEDGLSALHQAVIEDCQDVVETLIRHGADLDIKDADLWTPLHAAVACGNLDLVKYLVEKGASLVEINTDGNMAIDLVEDMEEIEIFLDEAMAGKGYDEEGLEQIRNETATLMLDELREAAQQNSYDFNVQGSHGETVMHIAAANGYDQVVEYLLDHGAKISVVDHDAWQPIHAAACWGHDKIIEILVNHGADLDALTKDGETPFDLTEDEDLQGMIIELK---------ESGTKSHKLKRSQSNSSRTLSVRRTSIVEKHKISVNDAKQEGIFRQN 1262
              EH  L+ E+  +   S ++RL HA+KRR +Q+K +   E        P   P   A+     K++ F  ++ L+EAA+RND +EV   L  +GVS DL NEDGL+ALHQ  I+D +++V+ L+  GA+++  D++ WTPLHAA  CG+L LV+ L+  GA+L+ +NTDGNM  DL +D + ++  L+ AMA +G  ++ +E  R      MLD++R   Q  + D +    HG T++H+AAANG+ +    LL+H A +S  D D W+P+HAAA WG   ++E+LV HGADL+A +   ETP D+  DE+++  ++ELK         +S  +S   +R+ S  SR   VRR S+ ++  +      QE I  Q 
Sbjct:    1 MAEHLELLAEMPMVGRMSTQERLKHAQKRRAQQVKMWAQAEKEAQGKKGPGERPRKEAASQGLLKQVLFPPSVVLLEAAARNDLEEVRQFLG-SGVSPDLANEDGLTALHQCCIDDFREMVQQLLEAGANINACDSECWTPLHAAATCGHLHLVELLIASGANLLAVNTDGNMPYDLCDDEQTLDC-LETAMADRGITQDSIEAARAVPELRMLDDIRSRLQAGA-DLHAPLDHGATLLHVAAANGFSEAAALLLEHRASLSAKDQDGWEPLHAAAYWGQVPLVELLVAHGADLNAKSLMDETPLDVCGDEEVRAKLLELKHKHDALLRAQSRQRSLLRRRTSSAGSRGKVVRRVSLTQRTDLYRKQHAQEAIVWQQ 374
The following BLAST results are available for this feature:
BLAST of TCONS_00002063 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PP16A9.701e-7538.46Protein phosphatase 1 regulatory subunit 16A OS=Ho... [more]
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