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TCONS_00002063 (transcript) - C. hemisphaerica

Overview
NameTCONS_00002063
Unique NameTCONS_00002063
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2423

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00002063 ID=TCONS_00002063|Name=TCONS_00002063|organism=Clytia hemisphaerica|type=transcript|length=2423bp
gtttcagtgtaaataattttcatttaaacTGTCAGCCGGATTGATTATAG
CTGCTGATTCATTTCAAAAAGAgtaaagatttgtaaacaaaaaagagaCA
ATGCTATTTGTTGCTTATTGATATTCAAAAGTTGAGGATGTTTTTGCAAT
GATTAATCCAAGCAATGCGTTGAAGGATGGTCCAGTACGTCGAGCATGAC
ACACTAGTTAATGAACTTGTAACTCTCGAGAATTTCTCACCAGAAGACCG
ACTAGCTCATGCCAGGAAAAGACGTCATGAACAGATCAAATCTTATGACA
GCCGGGAAACCAATCCAAATGCGTACCCTCCTGTGCATGCTAGTCACAAC
AAACGAATTCGTTTTGATAAAAACATCGAATTGATTGAAGCTGCTTCACG
GAATGATTCTGATGAAGTCGAGCATCTATTAACACAAGCAGGAGTGAGTG
CAGACCTACAAAATGAAGATGGCTTGAGTGCACTACATCAAGCGGTAATC
GAAGACTGTCAGGATGTTGTAGAAACGCTAATAAGACATGGAGCTGACCT
TGACATCAAAGATGCCGACCTGTGGACGCCTCTCCACGCTGCTGTAGCCT
GTGGGAATCTTGATTTAGTGAAATACTTGGTGGAGAAAGGAGCCAGTCTA
GTGGAGATCAACACGGATGGAAATATGGCTATCGACCTTGTTGAAGATAT
GGAAGAAATTGAGATCTTCCTCGATGAAGCAATGGCTGGCAAAGGTTATG
ACGAAGAAGGGCTGGAGCAAATTCGAAACGAAACAGCCACTCTCATGTTG
GACGAATTGAGAGAAGCGGCGCAACAAAATTCATATGATTTCAATGTTCA
AGGTTCACATGGAGAAACTGTCATGCACATAGCAGCAGCAAATGGTTACG
ATCAGGTGGTGGAATATTTATTGGATCACGGAGCTAAAATAAGTGTTGTC
GACCACGATGCATGGCAACCTATTCACGCGGCCGCTTGCTGGGGTCACGA
CAAAATCATCGAGATTCTTGTGAACCATGGTGCAGATTTGGATGCACTGA
CAAAGGATGGTGAAACTCCTTTTGaTTTGACGGAGGACGAAGATCTGCAG
GGGATGATTATCGAACTCAAAGAGTCTGGAACCAAATCACATAAATTGAA
ACGAAGTCAAAGCAATAGCTCCAGAACatTATCCGTGCGTCGAACGAGCA
TCGTCGAAAAGCACAAAATTTCCGTCAACGACGCTAAACAAGAGGGAATA
TTCCGTCAAAATCCTGACTTCTTACACGTCGTTATCAACACGGgcgagga
agaagaagaagaagaaacgcGGAAAGGGGAAACCACCtcaaacaacaaag
aaaatcTCTCTTCACCTGATGAAAAACAGCCTGCTCAACCATCACAGCCT
CCAGTTGTGGTCGCTCCGTCACCTCCACAACAACCTACCGAAGCAGAACA
ACAGCAGAAACAAAGCGAAGGTTCAGTATCGGTCAACTTATCAACCGGGG
TACATTACAAAGCGGTGGAACAAAAGATTTCCATTGAGAGTGATaccgaa
agtgaaagtgccaCTAATCACGTGACCAAAGCGAATAACACGCTGTCTAA
CGGAGGAGTCTCAGCCGATACGTATCCGGAAGGGCGGTATACGAAACTGG
CGGCCGACTCAACGCCCCAACCAAATACGGACTCATCTCAGATTGTTTTA
GAATTGGGTGATGGCGGACAACACTCTCACAACACGGCTGTGCAAAACCA
TGATAAAGAACTTCAACAATCGACTGATATGAGTGTCAAAAAGAAATGTT
GTGTAATTTTATGATTCATTCTATGATCATATTTTATTGGATAATTCATG
GTGCCTGGTTGCCATGTTAGATAATGACGTCATGTTTAGTTCACCACGGT
GGATATTTTAATGCGAATTCGACTGAGAAAATCACAGATAATCACATTTT
TGGATGGAAtggaactttttagaaatattttaatttaactGATCAGATGA
TTGTTTCCTGATTTTATTCTCTCGATtttaataaaatgacaaaatctgcg
acaaaattaatttaaagCTTTTCACTTAAGCAAACCTGAGGGAAATAAAG
AGACCATTAAAATAAGTAACCTATTTTTACTGAAAACAGTCTTCtttaaa
tacattttttatgttgggaattttttttttttgataaactgCTTGTCTAC
TTGTTCTCATATatttaaactttattttttcgtaaatttttcaaaaattt
ttgttagGTGAGATTTTTAACCGACAATTAAGTTATATAACAACTTTTAA
TTTATTGCTTcccattgtttttcttttgcaaATGTTTCAACTTATTGCtc
agaatcaaatcaataaatcaTTTAAGCAATCCCTGTGGTCCACTGACCAA
CTGATAACTCCCAATTATGTAAC
Run BLAST on NCBI

transcript from alignment at sc0000018:731142..741070+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00002063 ID=TCONS_00002063|Name=TCONS_00002063|organism=Clytia hemisphaerica|type=transcript|length=9929bp|location=Sequence derived from alignment at sc0000018:731142..741070+ (Clytia hemisphaerica)
gtttcagtgtaaataattttcatttaaacTGTCAGCCGGATTGATTATAG CTGCTGATTCATTTCAAAAAGAgtaaagatttgtaaacaaaaaagagaCA ATGCTATTTGTTGCTTATTGATATTCAAAAGTTGAGGATGTTTTTGCAAT GATTAATCCAAGCAATGCGTTGAAGGATGGTCCAGTACGTCGAGCATGAC ACACTAGTTAATGAACTTGTAACTCTCGAGAATTTCTCACCAGAAGACCG ACTAGCTCATGCCAGGAAAAGACGTCATGAACAGATCAAATCTTATGACA GCCGGGAAACCAATCCAAATGCGTACCCTCCTGTGCATGCTAGTCACAAC AAACGAATTCGTTTTGATAAAAACATCGAATTGATTGAAGCTGCTTCACG GAATGATTCTGATGAAGGTTTGTTTGTAACACCTTAGGGTGGGGCCTGCC CATTTAGCATATTGCTTTACCTCTATGCTATATTGTCGACTCTTCTTTTA TAGTTGTGGCTTCTACCtcattacacgaatattactagtcattttattaa cacaaattgaaaatttcgtgtttataaaaacccccttaattaaaaccagc cgttgtttccttgaaaaagcagaaaattttaagttaaaatttcagatcac gtgcaaatttcaaggccgttgaatacttacctagtaatatttgtgtaata aggtattccAATTAGGAATAAAATGCCACTGTATACAACAGTTTAACACA ACACTTGAAGTGTCTTAATTTGAGTTGACATTTCGTTTTCAGTCGAGCAT CTATTAACACAAGCAGGAGTGAGTGCAGACCTACAAAATGAAGATGGCTT GAGTGCACTACATCAAGTAAGTTAATATTACCCTTTCATTGGACGAGATT CTTTAGAAGTTATTATCGTAAAGTTTGGCTTCTTGTATACAATGACAGGC TATTTCTATAAAACGAATTGTACAAGACATCTACGTAGTTCAAActtctt tcaaaatgtttgaAAGATTAATTTGACCAATCCCACGCTACTACTATTTC AAACTGTGGTTCAGTCTTGTTTTTGAGTGCCCCATATCACTTAGCTATTT GCTAGCCATATAAGTCATAAAATTTAGGGAAAATAGCAATAGACTTTGAA CTAGGGTTAAAAAGAGCTATTACCCAGATGATAGTGAATGAACTAAAGAt ttgttttcatattttctgAAGGCGGTAATCGAAGACTGTCAGGATGTTGT AGAAACGCTAATAAGACATGGAGCTGACCTTGACATCAAAGATGCCGACC TGTGGACGCCTCTCCACGCTGCTGTNAGACATGGAGCTGACCTTGACATC AAAGATGCCGACCTGTGGACGCCTCTCCACGCTGCTGTAGCCTGTGGGAA TCTTGATTTAGTGAAATACTTGGTGGAGAAAGGAGCCAGTCTAGTGGAGA TCAACACGGATGGAAATATGGCTATCGACCTTGTTGAAGATATGGAAGAA ATTGAGATCTTCCTCGATGAAGCAATGGCTGGCAAAGGTTGGTAGTTTGT AATTAATGACATGTATTTCTTTGAATTCGGACTTTTTGTCAATCCTTTCT TCCTGAGGGGTCCCCCTTTCTTGCTTTGTCCCCCTCCCAACCCACTTCCT TTTCCCAGTTTTTCGGAGGGTGGCATAACCCCTTAGGAAGAGGGTTCAAA GGGGGTATTCATCATCTCAAAGAAAACACTATTTTATAAGTGTTAGGGAG GATAATATTGAGCATGAGATCCTTCTCAGTCTTTATAGAACTCTCCCAGC TCATAGAATGACAGTATGTAAAGAGGGATTTTGCTTAAGCTCAGAAAATG CTTCAGTGGTTTATTTGGATagtcatagtgcggaaaggggtctgaccccc cttcttaaacgaccccccccccttcttggcatcccccaacctttaaaaat gcctatcccccaaggttTTCgggctaaattttttatggtaaaaagggaag ggaaacagtaaagaaaaattaagtctggcaaatataataccactttttag ataaaataaagaacttcctttcatgcagaccaaatttcataacagtgctg gaaaattaTCTACAATAATATTTAATCCCCCGCcccctttttagtgaaaa tttctgacccccccccccttcttcacttttttggaagggggggggggttc cgaACTATGATAGTAAACAAGAGATTTACATTATTGAACGCTGTCTTTTA AGGTTATGACGAAGAAGGGCTGGAGCAAATTCGAAACGAAACAGCCACTC TCATGTTGGACGAATTGAGAGAAGCGGCGCAACAAAATTCATATGATTTC AATGTTCAAGGTTCACATGGAGAAACTGTCGTAAGTGGAATCTCAAATAA ATTAGATTTCGTCCCTAGTGATTTATCTCTGTATTAAAGCAGTTTGATCA CAAAGAGTGCAGAATTTTTGTTgtggaaaagtttgaaattaattttcaat gGGGAGCATGCTTTCGTTCTGCTTTTTATATCGTCTTCGTTTGCTTTCGC TTGTAATTTTTGGTTCCCTTCTCAAAATGCTTAGTTTTTGGTTATTGCCA TGTATTGTGCGCAGTTAGGTAAACATGTGGCAAACAGATAACAAGAATTT GATTTGATCAAGTATACAGAAGGACTGTGAAATagattttcttcatttca gATGCACATAGCAGCAGCAAATGGTTACGATCAGGTGGTGGAATATTTAT TGGATCACGGAGCTAAAATAAGTGTTGTCGACCACGATGCATGGCAACCT ATTCACGCGGCCGCTTGCTGGGGTCACGTGAGTATTATGTTATTCGTACA CCTGACAAGTCTTTCTGGCTCCCATTGTCGCTGAAAGTCTTAAATTAGTG AACCACCTTTAAAAACATCGGCTTTCACTGTCCTTCGTTTCAACAATTCG AATTTCGAAtactttaaaaatgatttccttATGACGTTTACCAATACACG CGTTATAGTTTCTTATGACTCGTTTACCCATACACGATATTGTTTCTTAT GACTCGTTTACCAATATACGTGTTATCGTTTCTTATGACTCGTTTACCCA TACACGATATCGTTTCTTATGACTCGTTTACCCATAGACGATATTGTTTC TTATGACTCGTTTACCCATACACGTTATCGTTtcttttgtctcgtttacc aaTATACATTATCATTTCAGGACAAAATCATCGAGATTCTTGTGAACCAT GGTGCAGATTTGGATGCACTGACAAAGGATGGTGAAACTCCTTTTGGTGA GATTCTTATCTCCTTCATTCTGTCCGGTTTCCCACCGGATAATCCGCCTT TCTTAGCAACACTTTCATTCAGTATTTTTAGCTCCTGAAGTTTTCGGTTA CCGTGAAACTAGACGATTTAGTCGGCGACAGttgcaatattttcaaaaat atgaatttattatgctaaaaacaaaacatatgAGATATACTTACTGGATC TTTAgccattataaaaacaatgtatTCATGAACCAAAGTGGCctaaacta tttaaaacatccaagaATGTCCCATTTCTGGATCGCCATTTTGAATCAGT GCTTTTCTATGAAAACTGCTGCCTCGCTGTTCTTTCAAAACATTAGcttt tcaaatatcaaaagagagcttaacctttccagcgcgcaacatttttaaaa aaatctcaaaattttcaactgtttttttgaatcctaaaactttaaaatag tgttaaagcttgtagcttgaaagttagaaaatggttttggtaccatttgg aaggtatttttatactctttctaaaagtATTCAGTTTATAcccttttaaa tcaagtggtcaggagttatagcCTTAGGTCTGAGACTTGGTATATGAGCT CATTTTGGACGTTTATGTACGTCATTCGGGTCTGAAGGGTAAAAACGTCT ACTTCCCTTTTCTCTTTACTTTTACGgctagcaaagaagccaatgagaaa tatagcttagaagatTGCTATGTAAAAAAAACGAATAGGTTAAAACATTT TGCGTAGATTGAATTTTGAGAATCAGTGATCTGACGTAATTTCGCGGGAT CTAACATCTGgaaatttcgcgaaattaaattttgtgaaaattaatccggt taaagtaaaTTGATGTGTCATTTTGAGGCTACAAGTTTTATAAAACACAG TGAATCTTGGGTGAGTTTTTCTTACCGCTCGTCATATTTTGATCTTTACG AcgtcttctttttattcagaTTTGACGGAGGACGAAGATCTGCAGGGGAT GATTATCGAACTCAAAGAGTCTGGAACCAAATCACATAAATTGAAACGAA GTCAAAGCAATAGCTCCAGAACGTAAGATGAAATTATTGTTACTCAAATA ACTCAAATAAATTAACGATAAAGTAATTTCTTTACTCAATAAATACATTT GGTTTCATTCGAAACTTAAGGCTTTATTATACCTGCTATTGCAAGAAAGT TATTCACtgtaagaaaagtttgaagaaaaagaacttgaaacatcttcaaa ttttcagggtcacgtgattcaatttttgaattgtttacttttttagatTA TCCGTGCGTCGAACGAGCATCGTCGAAAAGCACAAAATTTCCGTCAACGA CGCTAAACAAGAGGGAATATTCCGTCAAAATCCTGACTTCTTACACGTCG TTATCAACACGGTTCGTTTGATCCTTATCTTTTCTTTGATTATCCTAACc cttaagaaaaatatttgaaaagtttttcgtagagaaattgaaatttcacC TGTGACTGATATCGCTAAAAAGTGTGTGGCTAAAAGAATAATATGTGCTT CAATAGGGAACTTATTTTGTTGGAAACTACTTTGGCGCtacttctttcca atgaaaggATTACTGTCGCGCAAAAGTACTAGGttcctcgccaaaattaa tgtttttatgATTTTCTAAAATAACCCCTGATTTTTCCCTCAAACACtca tttttaggtaaaaaagaAACAACATACCTTGCTATTcgttaaaattaaaa atgagtTCTTACAGGGTTTACAAGTGTTTAAATATAATACTGtttacaaa aagtcaaaaacttgtaactttaGTATCGTGCCGAATTTGAAATCACCATT CTCAAAAGAAAAGTGTGTATTGTACTCTgaccttgatttttttttttcta catggaATTTCCTCCTTCCCATTCTAGTTTTTTTGCATATAATAATATTG TGCTAGGATTTCACTTTTTACCAAacctaattaatttttttgcgtTTTCT TTTGGTGCAGGgcgaggaagaagaagaagaagaaacgcGGAAAGGGGAAA CCACCtcaaacaacaaagaaaatcTCTCTTCACCTGATGAAAAACAGCCT GCTCAACCATCACAGCCTCCAGTTGTGGTCGCTCCGTCACCTCCACAACA ACCTACCGGTATGCTTTTCTCATCTCCTTCGTTAatcctttaattttttc ttcgaaaagcATTCGTTTTCTGATAATTAATGCAGTGATGTTTATTGCTG ACTCTCCATTTTGCCCACCGAGGTACTCTAGATTTTACAACCAAAAGTAT AATTTTATCCGAAATAGAAAATTAACATAATACCGGTCGGTGTTTATTGA ACCTGGCACAGAAAGGGTCGATAAGGTCATTTATATTACTAAAAGTGACA AATGAGCTCGTGGAAAGTCAAACCCCCAGCTGTGttaatagatttataaa aagaagaaagttttaagtTCTGTCTATCATTTAAACTTCTGACTTTTCTT CCAGAAGCAGAACAACAGCAGAAACAAAGCGAAGGTTCAGTATCGGTCAA CTTATCAACCGGGGTACATTACAAAGCGGTGGAACAAAAGATTTCCATTG AGAGTGATaccgaaagtgaaagtgccaCTAATCACGTGACCAAAGCGAAT AACACGCTGTCTAACGGAGGAGGTNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNTTATGAATTGAGAGTTTATTTG AGAATACCTACTAATAAGTTTTCCATTATTTCTTCTTTCTCCCAGTCTCA GCCGATACGTATCCGGAAGGGCGGTATACGAAACTGGCGGCCGACTCAAC GCCCCAACCAAATACGGACTCATCTCAGATTGTTTTAGAATTGGGTGATG GCGGACAACACTCTCACAACACGGCTGTGCAAAACCATGATAAAGAACTT CAACAATCGACTGATATGAGTGTCAAAAAGAAATGTTGTGTAATTTTATG ATTCATTCTATGATCATATTTTATTGGATAATTCATGGTGCCTGGTTGCC ATGTTAGATAATGACGTCATGTTTAGTTCACCACGGTGGATATTTTAATG CGAATTCGACTGAGAAAATCACAGATAATCACATTTTTGGATGGAAtgga actttttagaaatattttaatttaactGATCAGATGATTGTTTCCTGATT TTATTCTCTCGATtttaataaaatgacaaaatctgcgacaaaattaattt aaagCTTTTCACTTAAGCAAACCTGAGGGAAATAAAGAGACCATTAAAAT AAGTAACCTATTTTTACTGAAAACAGTCTTCtttaaatacattttttatg ttgggaattttttttttttgataaactgCTTGTCTACTTGTTCTCATATa tttaaactttattttttcgtaaatttttcaaaaatttttgttagGTGAGA TTTTTAACCGACAATTAAGTTATATAACAACTTTTAATTTATTGCTTtcc attgtttttcttttgcaaATGTTTCAACTTATTGCTcggaatcaaatcaa taaataatttaaGCAATCCCTGTGGTCCACTGACCAACTGATAACTCCCA ATTATGTAGCTGATAAGAATGGAATTGCTAACCCGGGGGGGGTGTACTTA GGCTAAATGGGTGtcaggtatgtgcgagccatagaggtccctttttcaca ccctcatAAGGGTACAAAACCATTAAANAAGACGTCCGTTTCTTAGTTTC AACTGGTACTTGGAGACCAATTATAAGAATTGAAAGATACATCACCCGAA TAGTAGCCTTTTTTagtgcctcgttttgaaactatTACATAGGTGATTAA ATCCCTTCATTCTTCAAGTGTTATACTTGTTAAATAGATTTAACTTATTA TGAATTGAGAGTTTATTTGAGAATACCTACTAATAAGTTTTCAATTATTT CTTCTTTCTCCCAGTCTCAGCCGATACGTATCCGGAAGGGCGGTATACGA AACTGGCGGCCGACTCAACGCCCCAACCAAATACGGACTCATCTCAGATT GTTTTAGAATTGGGTGATGGCGGACAACACTCTCACAACACGGCTGTGCA AAACCATGATAAAGAACTTCAACAATCGACTGATATGAGTGTCAAAAAGA AATGTTGTGTAATTTTATGATTCATTCTATGATCATATTTTATTGGATAA TTCATGGTGCCTGGTTGCCATGTTAGATAATGACGTCATGTTTAGTTCAC CACGGTGGATATTTTAATGCGAATTCGACTGAGAAAATCACAGATAATCA CATTTTTGGATGGAAtggaactttttagaaatattttaatttaactGATC AGATGATTGTTTCCTGATTTTATTCTCTCGATtttaataaaatgacaaaa tctgcgacaaaattaatttaaagCTTTTCACTTAAGCAAACCTGAGGGAA ATAAAGAGACCATTAAAATAAGTAACCTATTTTTACTGAAAACAGTCTTC tttaaatacattttttatgttgggaattttttttttttgataaactgCTT GTCTACTTGTTCTCATATatttaaactttattttttcgtaaatttttcaa aaatttttgttagGTGAGATTTTTAACCGACAATTAAGTTATATAACAAC TTTTAATTTATTGCTTcccattgtttttcttttgcaaATGTTTCAACTTA TTGCtcagaatcaaatcaataaatcaTTTAAGCAATCCCTGTGGTCCACT GACCAACTGATAACTCCCAATTATGTAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001084XLOC_001084Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00002063-exon-sc0000018-1491911889:731142..731558TCONS_00002063-exon-sc0000018-1491911889:731142..731558Clytia hemisphaericaexon
TCONS_00002063-exon-sc0000018-1510915933:731142..731558TCONS_00002063-exon-sc0000018-1510915933:731142..731558Clytia hemisphaericaexon
TCONS_00002063-exon-sc0000018-1575043694:731142..731558TCONS_00002063-exon-sc0000018-1575043694:731142..731558Clytia hemisphaericaexon
TCONS_00002063-exon-sc0000018-1491911889:731934..732007TCONS_00002063-exon-sc0000018-1491911889:731934..732007Clytia hemisphaericaexon
TCONS_00002063-exon-sc0000018-1510915933:731934..732007TCONS_00002063-exon-sc0000018-1510915933:731934..732007Clytia hemisphaericaexon
TCONS_00002063-exon-sc0000018-1575043694:731934..732007TCONS_00002063-exon-sc0000018-1575043694:731934..732007Clytia hemisphaericaexon
TCONS_00002063-exon-sc0000018-1491911889:732363..732408TCONS_00002063-exon-sc0000018-1491911889:732363..732408Clytia hemisphaericaexon
TCONS_00002063-exon-sc0000018-1510915933:732363..732408TCONS_00002063-exon-sc0000018-1510915933:732363..732408Clytia hemisphaericaexon
TCONS_00002063-exon-sc0000018-1575043694:732363..732408TCONS_00002063-exon-sc0000018-1575043694:732363..732408Clytia hemisphaericaexon
TCONS_00002063-exon-sc0000018-1491911889:732472..732678TCONS_00002063-exon-sc0000018-1491911889:732472..732678Clytia hemisphaericaexon
TCONS_00002063-exon-sc0000018-1510915933:732472..732678TCONS_00002063-exon-sc0000018-1510915933:732472..732678Clytia hemisphaericaexon
TCONS_00002063-exon-sc0000018-1575043694:732472..732678TCONS_00002063-exon-sc0000018-1575043694:732472..732678Clytia hemisphaericaexon
TCONS_00002063-exon-sc0000018-1491911889:733394..733521TCONS_00002063-exon-sc0000018-1491911889:733394..733521Clytia hemisphaericaexon
TCONS_00002063-exon-sc0000018-1510915933:733394..733521TCONS_00002063-exon-sc0000018-1510915933:733394..733521Clytia hemisphaericaexon
TCONS_00002063-exon-sc0000018-1575043694:733394..733521TCONS_00002063-exon-sc0000018-1575043694:733394..733521Clytia hemisphaericaexon
TCONS_00002063-exon-sc0000018-1491911889:733843..733968TCONS_00002063-exon-sc0000018-1491911889:733843..733968Clytia hemisphaericaexon
TCONS_00002063-exon-sc0000018-1510915933:733843..733968TCONS_00002063-exon-sc0000018-1510915933:733843..733968Clytia hemisphaericaexon
TCONS_00002063-exon-sc0000018-1575043694:733843..733968TCONS_00002063-exon-sc0000018-1575043694:733843..733968Clytia hemisphaericaexon
TCONS_00002063-exon-sc0000018-1491911889:734362..734437TCONS_00002063-exon-sc0000018-1491911889:734362..734437Clytia hemisphaericaexon
TCONS_00002063-exon-sc0000018-1510915933:734362..734437TCONS_00002063-exon-sc0000018-1510915933:734362..734437Clytia hemisphaericaexon
TCONS_00002063-exon-sc0000018-1575043694:734362..734437TCONS_00002063-exon-sc0000018-1575043694:734362..734437Clytia hemisphaericaexon
TCONS_00002063-exon-sc0000018-1491911889:735411..735513TCONS_00002063-exon-sc0000018-1491911889:735411..735513Clytia hemisphaericaexon
TCONS_00002063-exon-sc0000018-1510915933:735411..735513TCONS_00002063-exon-sc0000018-1510915933:735411..735513Clytia hemisphaericaexon
TCONS_00002063-exon-sc0000018-1575043694:735411..735513TCONS_00002063-exon-sc0000018-1575043694:735411..735513Clytia hemisphaericaexon
TCONS_00002063-exon-sc0000018-1491911889:735738..735852TCONS_00002063-exon-sc0000018-1491911889:735738..735852Clytia hemisphaericaexon
TCONS_00002063-exon-sc0000018-1510915933:735738..735852TCONS_00002063-exon-sc0000018-1510915933:735738..735852Clytia hemisphaericaexon
TCONS_00002063-exon-sc0000018-1575043694:735738..735852TCONS_00002063-exon-sc0000018-1575043694:735738..735852Clytia hemisphaericaexon
TCONS_00002063-exon-sc0000018-1491911889:736452..736599TCONS_00002063-exon-sc0000018-1491911889:736452..736599Clytia hemisphaericaexon
TCONS_00002063-exon-sc0000018-1510915933:736452..736599TCONS_00002063-exon-sc0000018-1510915933:736452..736599Clytia hemisphaericaexon
TCONS_00002063-exon-sc0000018-1575043694:736452..736599TCONS_00002063-exon-sc0000018-1575043694:736452..736599Clytia hemisphaericaexon
TCONS_00002063-exon-sc0000018-1491911889:736946..737113TCONS_00002063-exon-sc0000018-1491911889:736946..737113Clytia hemisphaericaexon
TCONS_00002063-exon-sc0000018-1510915933:736946..737113TCONS_00002063-exon-sc0000018-1510915933:736946..737113Clytia hemisphaericaexon
TCONS_00002063-exon-sc0000018-1575043694:736946..737113TCONS_00002063-exon-sc0000018-1575043694:736946..737113Clytia hemisphaericaexon
TCONS_00002063-exon-sc0000018-1491911889:740256..741070TCONS_00002063-exon-sc0000018-1491911889:740256..741070Clytia hemisphaericaexon
TCONS_00002063-exon-sc0000018-1510915933:740256..741070TCONS_00002063-exon-sc0000018-1510915933:740256..741070Clytia hemisphaericaexon
TCONS_00002063-exon-sc0000018-1575043694:740256..741070TCONS_00002063-exon-sc0000018-1575043694:740256..741070Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000018supercontigsc0000018:731142..741070 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.23734 1.4545 3.98078 3.30449 7.75844 4.88195 4.52013 5.12932 2.33425 2.22412 1.9429 1.98674 0.708563 0.29434 0.483974 0.584301 1.43962 1.47557 0.339762 0.355537 3.09026 2.86391 1.58803 1.66587 0.686322 1.6334 6.42784 8.73086 5.79429 5.54203
Blast
BLAST of TCONS_00002063 vs. Swiss-Prot (Human)
Match: PP16A (Protein phosphatase 1 regulatory subunit 16A OS=Homo sapiens GN=PPP1R16A PE=1 SV=1)

HSP 1 Score: 255.373 bits (651), Expect = 9.701e-75
Identity = 145/377 (38.46%), Postives = 222/377 (58.89%), Query Frame = 3
Query:  186 YVEHDTLVNELVTLENFSPEDRLAHARKRRHEQIKSYDSRET------NPNAYPPVHASHN---KRIRFDKNIELIEAASRNDSDEVEHLLTQAGVSADLQNEDGLSALHQAVIEDCQDVVETLIRHGADLDIKDADLWTPLHAAVACGNLDLVKYLVEKGASLVEINTDGNMAIDLVEDMEEIEIFLDEAMAGKGYDEEGLEQIRNETATLMLDELREAAQQNSYDFNVQGSHGETVMHIAAANGYDQVVEYLLDHGAKISVVDHDAWQPIHAAACWGHDKIIEILVNHGADLDALTKDGETPFDLTEDEDLQGMIIELK---------ESGTKSHKLKRSQSNSSRTLSVRRTSIVEKHKISVNDAKQEGIFRQN 1262
              EH  L+ E+  +   S ++RL HA+KRR +Q+K +   E        P   P   A+     K++ F  ++ L+EAA+RND +EV   L  +GVS DL NEDGL+ALHQ  I+D +++V+ L+  GA+++  D++ WTPLHAA  CG+L LV+ L+  GA+L+ +NTDGNM  DL +D + ++  L+ AMA +G  ++ +E  R      MLD++R   Q  + D +    HG T++H+AAANG+ +    LL+H A +S  D D W+P+HAAA WG   ++E+LV HGADL+A +   ETP D+  DE+++  ++ELK         +S  +S   +R+ S  SR   VRR S+ ++  +      QE I  Q 
Sbjct:    1 MAEHLELLAEMPMVGRMSTQERLKHAQKRRAQQVKMWAQAEKEAQGKKGPGERPRKEAASQGLLKQVLFPPSVVLLEAAARNDLEEVRQFLG-SGVSPDLANEDGLTALHQCCIDDFREMVQQLLEAGANINACDSECWTPLHAAATCGHLHLVELLIASGANLLAVNTDGNMPYDLCDDEQTLDC-LETAMADRGITQDSIEAARAVPELRMLDDIRSRLQAGA-DLHAPLDHGATLLHVAAANGFSEAAALLLEHRASLSAKDQDGWEPLHAAAYWGQVPLVELLVAHGADLNAKSLMDETPLDVCGDEEVRAKLLELKHKHDALLRAQSRQRSLLRRRTSSAGSRGKVVRRVSLTQRTDLYRKQHAQEAIVWQQ 374          
The following BLAST results are available for this feature:
BLAST of TCONS_00002063 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PP16A9.701e-7538.46Protein phosphatase 1 regulatory subunit 16A OS=Ho... [more]
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