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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00002006 ID=TCONS_00002006|Name=TCONS_00002006|organism=Clytia hemisphaerica|type=transcript|length=1420bp
TTAGAACAGtacaaaatatttaatgaaTTAAATTCGCAACAATCAATGAC
TGTTTTGTCTTTACAAGCAATATTCGGAGACAGAGACAATCAATCAGTTT
ATCATATCAACACTTTGCACTACACTTCAAGTGATTTTGTTACTGCCTAA
TTTAATCCGTTACTTAATATCAATACGGCGTATATCTGAAATTCGCAGCA
GTTAACGACAGTCTTGTCAATCTCAGAGCTTGGATACACAAGACGactgt
tttggttaaaatttatTTGGAAGTCAAAATCAGACACGAATCCCGTGTGT
CTATACTACGGTCTCGTTAACAATCCTGCAACCTATTAGAAAACTTCCGT
TACCTGACATCAATACTTTGCACGCCCTTTGGTGTCTTCAACCCATTTTG
TGTGCTGTCAACTTTACTAAAGTCAAAGCCATGGCCGATTGTTTCACCGA
AGAGTAAACACACATCAGTAAACATCGACGTCTTGTGTTGGAGTACAACC
GGTCCTTTATCTGCTGACGACGTTCTTGCATTCAAACCacggattttctt
ttcaataaaaaagagTAGCACGAAACACACATTGTTCAATTCTTGAATAT
TCCCAGTATATTTGTCATCACAGTCATCAATCCAAGAGCTTCACGAAACG
AAAGAATCtgaaaaaataaacatgctTCGGAACGTTGTTACAATAATTCT
GGTCATCTTCTGGCTTCATGGTGCGGTAGATTCAATTTCTAATGGGGATA
TTCTTAACGAAATTGACCTTTGTGACGCAAGCTATTGTCACTACAATGGA
ACTTGTATTAAAATGAACCCTGGTGATTTCAATGGACATTTTTCTGCTGA
ATCTTTGAATTATCGTTGTGTATGTTTTGCTGGCTATGTATCATCGAGAT
GTGAGAGTATGGTCGAGGAAGTGATACactttaatacaccttttcgaccg
tagccaccaattgcctcGCGGGCGTTTTTtatccgttttaccaccctaaa
taCGTTCCAGTCTTTTTTTCACGCCTaatgacaatagaaaaaagtgtaaa
aaaggattggatcgagtttagggtggtaaattaaagtagcacgcgcctga
ccgtgcgactacggtcgaaaaggtgcatTGAAATTGCAAGAATATTTTGT
CTAAAGTAAGCCTCTTGGCTATTAAAGAGACAAGCAAGTGTATAATGAAA
TGAAACTAAAGTTTTGTGTGTGCTTTCTTCCATTACTACCTTGTAGAAAC
CATGACAGTGTACTTAGACCAATTCTCTTGAGAGAGGTTTTCACATGGTA
GCAAAACAGAAAGAGGACTTTAATCATCTAAAACATACCTTTCTTTTAAT
CGCCATCTTGATGAGAAGATcaaaaaggccaataaaggtATTGGCCTTAT
TAATAGACTTTGCAATCATG Run BLAST on NCBI transcript from alignment at sc0000012:504529..505948 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00002006 ID=TCONS_00002006|Name=TCONS_00002006|organism=Clytia hemisphaerica|type=transcript|length=1420bp|location=Sequence derived from alignment at sc0000012:504529..505948 (Clytia hemisphaerica)
CATGATTGCAAAGTCTATTAATAAGGCCAATacctttattggcctttttg
ATCTTCTCATCAAGATGGCGATTAAAAGAAAGGTATGTTTTAGATGATTA
AAGTCCTCTTTCTGTTTTGCTACCATGTGAAAACCTCTCTCAAGAGAATT
GGTCTAAGTACACTGTCATGGTTTCTACAAGGTAGTAATGGAAGAAAGCA
CACACAAAACTTTAGTTTCATTTCATTATACACTTGCTTGTCTCTTTAAT
AGCCAAGAGGCTTACTTTAGACAAAATATTCTTGCAATTTCAatgcacct
tttcgaccgtagtcgcacggtcaggcgcgtgctactttaatttaccaccc
taaactcgatccaatccttttttacacttttttctattgtcattAGGCGT
GAAAAAAAGACTGGAACGtatttagggtggtaaaacggataAAAAACGCC
CGCgaggcaattggtggctacggtcgaaaaggtgtattaaagtGTATCAC
TTCCTCGACCATACTCTCACATCTCGATGATACATAGCCAGCAAAACATA
CACAACGATAATTCAAAGATTCAGCAGAAAAATGTCCATTGAAATCACCA
GGGTTCATTTTAATACAAGTTCCATTGTAGTGACAATAGCTTGCGTCACA
AAGGTCAATTTCGTTAAGAATATCCCCATTAGAAATTGAATCTACCGCAC
CATGAAGCCAGAAGATGACCAGAATTATTGTAACAACGTTCCGAagcatg
tttattttttcaGATTCTTTCGTTTCGTGAAGCTCTTGGATTGATGACTG
TGATGACAAATATACTGGGAATATTCAAGAATTGAACAATGTGTGTTTCG
TGCTActcttttttattgaaaagaaaatccgtGGTTTGAATGCAAGAACG
TCGTCAGCAGATAAAGGACCGGTTGTACTCCAACACAAGACGTCGATGTT
TACTGATGTGTGTTTACTCTTCGGTGAAACAATCGGCCATGGCTTTGACT
TTAGTAAAGTTGACAGCACACAAAATGGGTTGAAGACACCAAAGGGCGTG
CAAAGTATTGATGTCAGGTAACGGAAGTTTTCTAATAGGTTGCAGGATTG
TTAACGAGACCGTAGTATAGACACACGGGATTCGTGTCTGATTTTGACTT
CCAAataaattttaaccaaaacagtCGTCTTGTGTATCCAAGCTCTGAGA
TTGACAAGACTGTCGTTAACTGCTGCGAATTTCAGATATACGCCGTATTG
ATATTAAGTAACGGATTAAATTAGGCAGTAACAAAATCACTTGAAGTGTA
GTGCAAAGTGTTGATATGATAAACTGATTGATTGTCTCTGTCTCCGAATA
TTGCTTGTAAAGACAAAACAGTCATTGATTGTTGCGAATTTAAttcatta
aatattttgtaCTGTTCTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00002006-exon-sc0000012-1491911889:504529..505948 | TCONS_00002006-exon-sc0000012-1491911889:504529..505948 | Clytia hemisphaerica | exon |
| TCONS_00002006-exon-sc0000012-1510915933:504529..505948 | TCONS_00002006-exon-sc0000012-1510915933:504529..505948 | Clytia hemisphaerica | exon |
| TCONS_00002006-exon-sc0000012-1575043694:504529..505948 | TCONS_00002006-exon-sc0000012-1575043694:504529..505948 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000012 | supercontig | sc0000012:504529..505948 . |
Blast
The following BLAST results are available for this feature:
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