TCONS_00001959 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001959
Unique NameTCONS_00001959
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2370

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001959 ID=TCONS_00001959|Name=TCONS_00001959|organism=Clytia hemisphaerica|type=transcript|length=2370bp
AAAAGGAGAGAGAATAGAGACACAATAACAACTTTCGAGAAAGGGCAAGG
ACAGGTCATTAATCATTCAATGATGACATTATAAAAGACAGTGCTAATTT
TTTACCTCTTGCAACAAACAAACtgactttgattttcatttttcattaat
gGCAGCAGACTGTCGGCATTTTGTGGCTGTCTGATTTTTCCGTTTTACAC
AACGTCGACATTTTGCTTTTTTGAGGGAAATTGGACTGGAATCTTGATTT
TGCAGCAACTTCTCAAAAGACATTAGCTCCAGgtTATTGCTGGTGTCATT
ATTAGGTAAAAGGAGTACTGAAGAGTCGTGACAGATTTTACTACAGAAAT
GTTAGACAACGTGGACGGCAACTTTACATTCCCTCATGACATGACATGTG
AAGAGATGTTCCCAGACTTTACACCAGACGTATTTGATTATTTCTGCTCC
GTTACAACAGACACTACTCAAACACAAAACGATACAACATTGGAATTTTT
CGAACAAGTTTGTTGTGTTGATCGCACGCCAGTTTCGGTTCAGGACGATA
GCTCTATGCGTAAAACGCTATACATGATTTGTCATTCACAGAATTTGACA
GTGGATGTTGAAAATAACATTTGTAGAGAATTTGAACCATATTACATGCC
CCCGGAACCGTTTACGATAACACCAGCAACGTATGTAATAATGTCACTTC
TGACACCGATTGGTTTAATGGCAAACTTATTGATTATAATGACAGTGTTG
CGAGCTAAGAAACTCAGAACAACTACTGGGTTCTTCATTTGTCACCTCGC
CATCGCCGATCTGTTATGTATCTTATCTATGATGGCATACGTGATAGCCC
ATTCACAAATTGAActgaaacaaaattttaatattttgatgatATTCTCA
TCATTAGATGTTTTTATCGGTTCAGCTTCATTGCTACACGTGACAGCTGC
TAGTGTGGAAAGAGCCATAGCTGTTGCAAAACCCATGGTGTACCCGTTGA
TATTGTGCAAAGAACGAGCCAAGAAGGTGATTCTACTTATATGGGTTTAT
TGCATCGTTTTATTTATCGCTTGTGTTGCTAGAGTATTCGTCAAACCAAT
TATCTACAATTCAATCATATTTTACATAGCAGTTTGTTTAAGCTTCGGTG
TACCGTGCATATTGGTATTAATTTCTTATCTGAACATCTCAATCAGAGCC
TTACGGAATTTACAGATGGAGAAAAGAATTGAACGATCATTAATTATTGT
TTCCATGCTGAATGATACTCAAAGGAGAGCGCCGAGATATCATCATCAGA
TACGCGAATTAAAGCTAGCTNGCTTGTGTTGCTAGAGTATTCGTTAAACC
AATTATCTACAATTCAATCATATTTTACATAGCAGTTTGTTTAAGCTTCG
GTGTACCGTGCATATTGGTATTAATTTCTTATCTGAACATCTCAATCAGA
GCCTTACGGAATTTACAGATGGAGAAAAGAATTGAACGATCATTAATTAT
TGTTTCCATGCTGAATGATACTCAAAGGAGAGCGCCGAGATATCATCATC
AGATACGCGAATTAAAGCTGGCTCTCAATTTGACCATTATGACAGCACCG
TTTGTTTTCGGTTGGGGATATTTCATGATCTGTAATGTTTATGAGGAAGT
AACAAAGACTACATTGGATGGATTAAAAAATTGGTTCCTCAACATGTTAC
CTTATCTTATCTCATGTTTAAACCCAATCACATATCTACTATTCACAAAG
ACTTTACGAAAGGAAGCTATTAAATTGGTACTGAAACCATTCAGTAAGTT
CCGCTCACTACACCATCGACGCTTCTCATCGACATCGCTCATTTTTACCT
CACGTAATAGTAGCAGACACTCAGACTCGTCCGACGCTCGTATGATGCAA
AGGGAGGTCTAAGCTTAAGCTAGATCCCATCATAACGATTAAGCTTTTGA
CTACTAAAGCTTTATCCGATGGTAGGAGGGATTGTATTGAGTGTATTGAC
AAAAGAAGAAGCAACAGGTCATAGCAGGGACACTAATTAAGTagataata
aaaacaattataattcTTGTAAACATTCAGAAGTAATGGAACAAACACAT
TAAAACGgaattaaaaatgacaaataTTTCAAATCCAAAGGGACGTAAAT
TTGAAATAGGAACACGAACCAAAATTTagaatgtaaaatattttttttca
acgtATATAAAAAGATTTAGAGCAATATAGCTACGGGAGATGTAAATAGa
aaacatgtttaaaacgaCCATTTATCTTTGTAAAATATTATTATCCGTGT
AAATTTTTGGCTGATAgtatagaaaaatatcatatttatttgagaattaa
aagaaaacaacaagaaaagc
Run BLAST on NCBI

transcript from alignment at sc0000012:854410..872272-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001959 ID=TCONS_00001959|Name=TCONS_00001959|organism=Clytia hemisphaerica|type=transcript|length=17863bp|location=Sequence derived from alignment at sc0000012:854410..872272- (Clytia hemisphaerica)
AAAAGGAGAGAGAATAGAGACACAATAACAACTTTCGAGAAAGGGCAAGG
ACAGGTCATTAATCATTCAATGATGACATTATAAAAGACAGTGCTAATTT
TTTACCTCTTGCAACAAACAAACTGACTTTGATTTTCATTTTTCATTAAT
GGCAGCAGACTGTCGGCATTTTGTGGCTGTCTGATTTTTCCGTTTTACAC
AACGTCGACATTTTGCTTTTTTGAGGGAAATTGGACTGGAATCTTGATTT
TGCAGCAACTTCTCAAAAGACATTAGCTCCAGGTTAGATAAAATTTTATT
TATTTACTCATTTATTTTCTTCAGACTTTTCAAAACAATTAGGGCTTGGA
GAGCAGGAAAGCACAATGTCATCAAAGCAATTCTTGGCAAAGTTGGCGCT
TAGCGGCGGAAAGAAACGGTTGACAAAATTAATCGTCCTATCAATTCCAA
AGATCTAAAACGTTTTACATATTTAAATATAGTTTTGAACAACCTAAATA
AGGTATTTTTTTATCACTTTCCAATAAATCAAAATTTATTACTGATAAAA
TGGGTGATTTTATTCATGATTATCAATAAAAGGTATCGAATGCGTTCTTT
CAAAAAATCTACAATTATATTAGGTCTCTAGAACCTATGATAGATATGTC
TGTAGGAACTCAGGTGTCAGGGTTTCTAGAATAACAAGGAAAGATGTGTA
CATGATGCTCGGTCGATTTCTTTCTTGTTTTCAATACAATTAAACATTGG
GATTTCCGTTGACGATTGTCAGGCTTTTCCTTTTGGAGTTACTGTTACCT
AGCATCAAACCATTTGGATAAATGTTCAAATCTTCTCTGTTGTAAGTTTT
TTTGGGTGAATTTGGGTAAAAGTTTAACTCTGCTAACTTACAAAAGAATT
TCCTTTTCAATTTCTACTAAATTGGGTAACCTTTTACAACCCTGGGTCAC
ATACCCGATGGGACCGCCGCCCTAAAATTTCGTCCCTCTGGTGGTAAAAA
ATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAATTTTGATGAAGAAGAA
AATGAAGACTTTTGCGAGGAAGAGTATTTCAACTTTGAAGAGCTTAGTTT
CGGCGAAGAAAAAACATTTTGAACATTTTTTTGCAGTAGATGGTGTATTT
TTTACCGAACAATAAAAATTTTTGCGGAAAAATTTTGTAAATACTTCTTT
GTCTCGAAATCTTCGAAATAGTGGTTTTTCATCAATTTTTAACTGGATTT
TGCTTAAAAAAACAGTCATAACTTTTGACACTTCTTTTTAGAAAAATTTT
CCGCAAAATTTAAAATAGTTCAATTCTTTGTGGACAGTATAAAGACATTT
TGAAACAAAAAGGTTAATTACCCATTAAAACTTAGCACTTTTTATAAAAG
AAGGCGATGCAACATATTATTAACGTCTTTTTAAAGTTCATAACGTCATT
TCTGCAATTAAATTCTTAAATACTCTGAAGGGATTTGATTAAAAAGCAAT
TTATAAAGGTAATTCTTTGTTGAAAGTGTTAAAGAACCTAAAACATAACT
TTTATGTTCAAATACTAAAATCAATTTTCCGACTATGGTCAGAGCCCTTA
AGTTTCGCGAATTCGCAAAAATCGCGAAATGCGAATAAAAAGATAAAGGA
TTGTTAATTTTGAAATAACTATGTAGCAAGGTGAAGACTTTTAGCAAATA
AATCAAATTACATGTTCGTTAAAATCAGCCCACTTAATTGATAATGCAGT
TGGAACTATCATTAATGATGCATTTTTATAATAATACCTATTACTGATCC
ATTAATTCACTGGTTGCTTGATTCACCTTTCGTCATTTCTTTCGATTTCT
ATTATTTAACAAAATTAAAACATTCTTTTGAAATTGGACAAGCCACCTGT
GATTACACAAGCTGTATATGTTGAGTTCTTTGCTGAAGAAAATGTTTCGA
ACATATTATTTCTTGTTTCAAGAGCCTACAATATTTTACTGTAAAATCAA
TTTGAACTTTATTTTAACCCTGGGTAAAAAAGCAGCAAAATTTGAGCAAA
TTGGGACAAAAAACCGACCCAATGGTATACCTTAAAGGAAGAAATTTTGG
CGGAAAGAAAATTTGGCGGATTTGGCGGATTTAGCCAAAATCCGCCAAAT
TAAGTTCCCGCCGAAATTTATTTTTTCCTCCATCCGCCAAATTAAATTCT
CGCCAAAATTTCTTCCTTTAAGGTAAATCTTTATTTTTTTGTCCATTATA
GGGTAAATATGGGTGGACTTTTTCAAAATTACGAATAATTTAGAATTTGA
AAATCAGCTTAAAGCTATAGGAAGAAATCGTTTTAGGACTTCAGGATATG
GCACGTGTTTTCGTAAAGAATCATTTTCTATTTAAAGTTACCTTACATAC
AAGAGGTATGACAATGGAAAAATATTTTTCCTATCAGATTAATTTCATCG
TTAAAAATTGCATTCAAAGTTAATGATAACCAGGTAATCGAATTAAAAGA
TAAAACTTTTTTCCTATCGGATTTAATTTGCGGCGGGTGTAAAATAGTTT
TGTCTACTCAATAAATATTTATTTTAGGCAGGAAAAAGTAAAATTAAGAA
CCTTGCAATGAAAGCAGAAGGCTACACCCCTGTCTCAAAGGCCTGGTGGA
CATTTTTCCCTCAGTGAATGAAGATTTGTAACAAAAATCCCAATAGAAAT
ATAAATTTTATAGTTCCCAGCTAAAAAAATCCAGTGAGAATGGTTTTGAA
TTAATTTTCTTTCATTAAATTTCGAATGGGATAATTGTAGGGTATTTTCC
AAACGGGGACGAAATTTCAGCAAAATGTTCTAATATTGCGCGGGCTGTAA
ACTACTACTTTTCAATGACCAGCTGTACCAGTAGTTGAAGTTTTTTCCAG
CTAATTTAAGTAAATTTTGCAAATAGCTAGTGTATATTCAATGAAAAAGC
TAAAAATCAAAATGGGGAACGGAAAATCGCTTGTTTGTTATGGATGGAGA
TTCCAACCTTTTATGTTTAATAAAATTCATTGGAGGTTTCAGAGCTTTAG
TGTCTTTTCCATAGGGGATGAGAGTTTAGTTTAGTTTCCCAAAAGGATTT
TTGCTCACCGCGGGGAAAATATTTTGCATGATTAACTTTTCCAGAAACCC
CTACAAGGTCTGTGGCTACAAACGAGGTACATATTAAGATACTAAGATCA
TGTATTGTCCTGAACCTGAATAAAATCAAACTATAGGCTGAAAATGATGC
CATTCTCAATATCCATTTCCACGTTTTGTGATCTACAAACGTAACATTTT
TCTAAGTTTGTCCTAGTGTTACACTTTCTGTCTCCTAGCCTACTTTGATG
TTATTACGAGAAGACTTATTTATAAGGATGTTTTCCCTCAACCCAATACC
TCGTGTAATTATCGACATAAATAATGACAAGTTTAAAGGGACTGGTATCA
AGGGTCATTAAGCAAAACATTTTGAATAGTTTTTTAACTTAACGATGCTA
TATTGTTCGTTCATTACCACAAATTAGAAACCACCAAAACAGAATAAATG
AAGGCCGTTACCATGGTAATACGTTGTAAACAGTTGACGGAATGTTATTC
ACTTCAAACAGATAGGACTATGTCGTTATGATTTTAAAATACAAGCTATT
TTATTAGAACAAGTAAATTTTGGCTGAGGCTGGGCTGTTCTTAACTTTCA
AACTCCTAAATTTTCAGGCTTATATGTTCTTACGATTTTCTTATAACTAT
TAAGTAGTCATATGGTGTCTTGATTTAAAAACTGAAAATGGGTTAAAATC
TGTTAAATCCAGTACTTAATAATTTTTAAATCTAAAGCTCAGATTGTTCT
TAGATTTTGGCTGGCTAGCCTCATGTTCTTATAAAATTGTTCTTGTGAAA
AAAGCGCGTAATAAAAAAATAATAATAGCAATAATAAAAAAAACAGATTT
ATTTGCCCTCCTCGGCATTACACTTTTTTTAGTAAGAACAAACTATATAA
GGCATAACTAACATAATGCTTCCATGGCCAAAACATTAAGAACAAGTTAA
GAACATTTTAAGGCTTCGTAGACTCGAAAACACAGCTAATTTCTTAGGAA
AATGGACAAAAATACATAAAAGTGGAGAAAATAAGAACATGTTAAGAACA
TGTTTAGGCTTGAAACTGAAAAAGCTAAGAACATTCGAAAGCTTCAAAAA
TTTTGGTTGTTCTTAATAAAAAAAAGTGTATTGGTCATATGTTTCGAAAA
ATAGGTGTAATCGAAAACTGCTGCACGTTTTTTTATAAGAAACACCCATA
TAAGAATGTTGGAAATTGTTGGGCAANTTTTTTATAAGAAACACCCATAT
AAGAATGTTCGTTGGGAAATTGTTGGGCAAAGATTAAGAGAATATCTTAA
TAATATATATTATGATTTATAAATTGATTTTTGGCTTTCTTCAAGCTTTA
TTTAAGCATTTCAAGGTTAATATTTTCAAACAGAATAAATTGAAAAATTG
CAAGTTTGTACCTTTCAGAGACCATTACTTGAAAACTAATTTGCCTTAAT
CAAATTCTTAGTTGCATTATCAGAGAAACGTATTTAATTCAAAGTAACAC
ATTGACAGTTTCTAGGAGGAGGTAACTAAAAAGGAAAAAAAGGGGTAAAA
TACTTTAAAAAACCTTAAGTTATACAATAAAAAAATATAGACCAAGAAAA
TTAGAATCGAGAAAAATTCGACAAATAAAGAAGAAATAGTTATTTCTTTG
TTTTTCAAATTTTATCATTCATGCAGAAAAACCGTCATCCTCTGTCCGAA
AAAAAAATCTATTGTTGTTATTCTCTCTTTCAAAGAGTCTTTTCAAGATT
TTTGTCTTGCCATCTGAGTCCGCATATATAAGCGACATATTGCATTCGTT
TAGTACATATATCTGTACTCACTTGAAGTTTTGTCACTCCTACGATGGCA
ATACACCTTTTCGGCCGTAGCCGCCAATTGCCGCGCGAGCTCTTTTTTTC
ACATAGAGACAATAGAAAAAGGTGTAAAAAGGATTGGATCGAGTTTAGGG
GGATAATTAAATAATAAAGTGGCAAGCGCTTGACTGCGCGACTACGGCCG
AAAAGGTGTATACCCTCAGATAGAGAGGCTCTTTGATGATAGTGACAACA
TGGAAGTTTGACTTCTGTACGAAGGAATAAAGACCCCTGTCCCGATGCGT
ACGATTTTTATTCAGTGGTGATATAATATGGTTAATAAAGGAGCTATAAT
TGAGGTATGAGCACGAACCCAGAACATTTTGGAAGTTTTTAGTATTTTTT
CCAAGTGGGAAAAGAATCGATTGCATGTTTATCTTATATTTATAGAATTT
CTGTAACGCTAGCCAAGCATTAAGAGATTATCTCCGTCTATCACTTTCGC
AAATTTAAAAATCCACTTTCCCGTGGAAATAATTGACGTTTTTTGGAATT
TTGGTACCCTTGGGGCACAAGGTAATCAAGGTAATTCGTTTTATTTTACA
AGGTACCTGTTGACCGCAAAAATTCCAAAATTCGCGAATTGACCGTTGAC
AAAATTAGGGGTAAAGGGACCGAATGACGTTACAGATTTGGGAAAAACTT
CAAAATGCGATATCTCGAGTTTGAGAAGGAGTTGGGAGGTCGTTGACCCC
TCATTGGATCGAGAATACTATGGGGAATAAGATGGGAGGGGTAACAGTGG
GTATATAGAAATTTTCAAAAATAAATATATTCAAATTGAGGCATTTTGGG
TCCGATGACGTCATCAAAACCTGAAAAATTCGATATCTTGAGTTTGAGAA
AGAATTAAGCAATGGTTGACCCCTCATTGGATCGGAAATCATCGAGAGAA
TCTTTTGGGTAAATGACAAATTGATTTCAGTGAAGTAAGCAATTTATTGA
CCTTTCGATGACGTCATTTAGGGCCCAAAATCGATTGCATGATTATTGAT
ATCTATGGGGATTTCTCAAACAGGGCAAAACTATTCGTTGAGTAAATAAG
GGCCCGTAAAGGGGTGCCATTTTGTATTTAGCACGAATTTGTGTTCAATA
GGCTATTTCACAGTCGAAATGGATCATGGGTAATCAGGACTGATTGCACC
CCGATAACGGTTTCCCGTTGTTTAGGGGCAAAAATCTTCAAAATTCTTCA
AAACATTCGACCAATAGTAAGTCGTTATTGGCGCGCAGTGGTCCTGATTA
CCCATTACGCTTTGCGACTGTGAAGTAGCCTATGGTAAAGTGACTTTTCT
TGAGATTGGATATTTCAACACGAAATTGGATATTTTAATACAGATAAGAA
GTCAGACATCACGTGGGAAATTTATTCGGAAGTTGTTTAAAAACAGTATC
TTGGCAATCTTTAGGAAAGATTTCCATAAATATCTCTCCAGACGTATAAC
TTTTAGAAAGTTTTAAAGATTTATCAAGGTTGATATATCTAAAACTTTCC
ATCTGTTTCCAAGAAATTTTCCTCCGTGGAGTGGGCTTTTCCAGGAAAAA
CCGTACGTATATTTTCCAAGGTTACATTATTTAAAAAATTGTGATAAACA
TGTTCATGTCCAGGGGATCGATTTGCCCTTGCGGGTCATGGTCAGAATTT
GTCTGATAGAAACCAATTTTTTGTACATTTTCATTAGTTTCAAGTAAACT
GATACAGAAGTTTAAAATGAGTCTTAATCCAACAAAATGATAAAGAAAAG
AAGAAATAAAGGTACTTGAGGCAATAACAAAGAAAGAGGGGAATTCTATC
AATTCCTTAATGATAATGAAGGTTGACTCGAAAGTTGATTTTTCAAAAGA
AACCGAACTGTATTAATTATTTCCGTCATCAAAGCATATTGCGTGAAAAA
CAAAGGAAAATGTGTAATTTTGTCTTTTTTAGAGTAGATTGACAAAAAGT
TTAGATTGCGGCGAGTAAATATTTAGAATATCTTTATAATTATAACGAAC
AAAAGGTAATAGGTAATATTGAATACAGTGCATCCTTCTTGACATGGTCA
TCAAGAATTTTTAACGACTTCAGTATATTTGCTTTAAAGTCGTATTTTCG
CGCCGCACAATGTGTCAACAGTGTTGTGTAGTCTTTGTCACGCCCTGCAC
ATGCATGGCATGGAAGAGTTTGTTACTACCTGTTCTCATGTGGTATGTTG
GTTATTTTGAAATTTACCGAGAAAGATTTAGCTGTTGGTTTAACTCGTTT
AGTACTGTGGGAAACTGAAATTCAACTTCAAATGCAATTTATTTTTTCGG
TCCAGTGAAATTATAGGTAGCCGAAAGAATCGTTTATAAATGAAGAAAGT
TTAGCTAGGTACTCTAAGGTCTCGAATAGTACGGGGTCCGAATAAAAGGG
GGTTCAAAATTGTACCTTCAAAAACCCCAAAATAAGGTAATTGTAAGCTA
AGAATAGGCTATTTAGAGCAATACAAAAAGAATTTCTAAAATTAATAAAT
GGATGGGGACATTTATTCAGGACCTAAGAGTAGTATTGAAAGAGAACCAT
TGAGTGCTAAAATATAGTATTTTGATAGTAAATGTCTGCGTGTCATTTTG
TCTTTAATACTCGTGTGTAAATTTGTCAATCTAATTCGAAATGTCAATGC
AATAAACAAATTCAAATAAATGTTTACTTTAAAGTACATGACTTAGACTA
ATTTTTGCAGCTATATAACCGTGGATCTTGAAAGCTTGACTAGATGTCTT
TGCAATTTTTTAGCATCAACGTTTGAACGGTTCTTGCCGGTTCTTGTTAT
GTTGAAATTTTTAATAATTTGGATTTTTCTACTAGTGCAGTATGAAGGAG
TATTAGAGAGAGTTTATCTTTGGTCAAATACAGAAATATGAGTGATTGAT
ACGAGTATGAAGTTAGAATATGGTTAAAAATAATCCAGATTTTTAAGTTG
TTAAAAGTTCTACCGTTGACGCTGTGCCGACAAATCGAGATTCTATTCAG
CGCGCAATCAACGAAGACAAAAGTAACCATGACGACCATCCAAGATCTTG
GATGAAGTTCAAAGTTGATATTTTTATTCCCGTCGTTGAAAACACAACTA
AAAAATACATCAATGCTTTTTAAAAAAAGTCAGTGATAGAGAATCACAAC
ATAAAGTCTGTCTATTATTTCGATTCAATTAAAGTGACATTTCCATAATT
AATAGTTTAGTAATTACTGTTATACATTTGGGGATCATGTAAAAGATTTC
TTTCGAAAGAAACTTACTTCAATTACACTTGGAGGTTTCTGGGTAATTCG
TAAATAGTAAACTGCATACTGATACAGGCTGCGTTTAGACCAACTGGCAT
TTGTAATTTGGCATTTGCTCATGAGGGATTCGATTTTAATAGCTTTCCCA
TTGTATTTTCTGTCATGGCATTTAAGGAATCGTCTTTACNTTCAGCATTT
TTTGAGCATTTTGATCTAATTTCTTAAGAAATTGCATGTTTTTAAGTCTC
CAAAGCCTTAGTATGTTCTTAGAATGTTCTTAAATTTTTAGGCTCGAAGC
CTCATGTTCTTATATAGTTTGTTCTTATAAAAAAAAAACGTGTACAGTGA
TTAGGTTGGCACTTTCGCGATAAAATTTCTATTATTGGTCTTCAGAGGTC
AATATATTCTTTGAAAACTTGACCTCTGATACTCAGGGTATAAAAGTTCT
AGTTTGGAGGAAGATTAATATATTGCCCTCTTTATAAGCCTTTGTGAGGT
GCGGAAAATTATGAAAGTAAATTGTCCTCAATTTAAAAATTAGATTTATA
ACTCCATGCTTCCTTTGCACCGCAAATATGATTTTTGATATTTTGGTATA
AGATTAGAAATATTTCTAATTCCTTCAACGCCTACACTGATTTTCCTGCA
GTTGATAGTGTTGAGGCATAAGTTCATTAAGCCTTACAGGTACCGACCTC
CTTTTATTTACCGGTCATTTTTTTGTTATTAATCTTCCTTTGATTACATG
CTCAAATTCTTCTCTAGGTTGAAGTTAAGGAAACTAAAAAATTTTTGACG
TCAAGCTAATTTTCGAGAAATTTGGACACATCTCTTGTAAGNAATGCCAG
AAAAGGGGATTCCTTTGCTCAAAATGGCATTTCAAATGCCAACGAAATGC
CAACACGCTGGCATCATTAGGCATTTGATAAACCGAACAATTACGCGGAA
CAATAGAATTCAAAAGAATACTGCAAGCAATTACAAATGCCAGGCTGGTC
TAAACGCAGCCACAGTCTGACATTACAATAAGGTAATCTTTGCTCTTCAT
TTTTGATTCTNACTTATGCTATTTTCGATTCTTATGGTCTTTGGTTCTTA
TAATAGATTAAGATCAAAATTGTGGACAAATTGGCATATTGTCCAAATTA
AAGTCACGATAAATCATTTTCAGAATTCAAAACAAGTAAAAGGGAATATG
GTTTGAGGGTTTTAGAGGAAGTATCATTCCAATACCATTAAATTATCGAA
GCTCTGGTACCAAGTGAAAGTACTAATATATTTCTTAGGGTATCACAGCC
GTAGCATTGCAAAAAGTGCTACGAAAACTGATATTGACTTTTATGACGTC
ACATTGTTAACGATATCCTTTTTTGTATAATGTTAATCATTTCTAATCAG
GTGCATCCTGTAAAACAAAAGAGTAGAGTTTTCATTTTACCTCGTTTTAA
TGCGCAAATGGTAAACTTCATCACTCGTTAAAAGTGGAGTAGAACTTTGA
ATAATTTGTAAAATTTTATAAATACTTCTTTTGTTGTCGATTCTTTCAAG
TTTTAAGTTTTTCAAAATGGGGTAGTGAAAAACGAATTTATCAAAAAAAC
AGGAACATATAGCCACTTTGAGCAAAAATTAGAAAAACGTTGGAAATGAT
TTGGGGCACGTACCAACAAAGGAAGAAATATAAGGAAAATCACAGTTTAA
AAAGAACAAAAGCATATAGGAACAGCAGTAATAAGTATACCATAATTAGT
GTATAAATGTAAATATTTCAGATGATTAGAAAATTTCAGAAGATTTTGAA
GAATGTGGTGTGATGAATAAATGACCTTCATGTTTTGAAAGACTGAAAAA
AATCTATTATTTTTGGATACACTGGTAATTAACGCATGTCATTAAAGCTA
CATTTCTATTGTTAACTGAAATTTTAATGGTGTAATTAATACTTGCAATT
AAAAATGGACAATAATTACAGAGCAATTACGTGAAAAAAAAAGGTTTTGG
AACAGTTTCTTAATTTTTCTGTTTGTTGTGGAGTGGAACGGATGGCCGTT
TGAATATGTTTTTCTTTTAAAGTTTGAGTTTTTCATTAAGTTTTTGGCAA
GTAAGTGCACTTTTCATCAGGTAAATCTTCATTTTTGAGGAAAGATAAAA
TGTTGATCAATTGATGATACATTTCAGAATCATTTGTAAAGTTGCCGTCT
TCGGAATTATGACGTTTTTGAAGATTTCCAAGTTAAAAGTATTGTGATTT
CTTTTTTTCTGTGATAATATTACTAAATCTTTTTCACAGTTTTTAAGAAA
GCTTGGCATTATTCTTTCATTGTTATCATACTTTTATCGGAAATATTAGA
TTTCCTATAAGATGAAACATTTTCTGCTATAATGTTTCATGGTATATTCT
TTTGATTTCACTCTTGTTTTCTTCATTTTAATGATGTTTTAATTATTGAA
GTTTCTTCTTGAATGATGTGATTGAATTGTAGTTTAATTTGACAGGCAGA
GACAATTTCAAAGGATTAATACTGAAATTTCGATGACACTGTATGCTATT
AAATGAAGATCAATTTCTAAATTAAAAAAGGACTGATATTATTTTGGGAA
ATGGCAATCATCTGTTGTACTATAATTAGAATATAAAAGATATATTTGTC
TCAACAAGGGCTTGTTATAATTATCGTGTTTGTCACAATAAAGTTACAGT
ATTATACTAAAATTATATGACTAAAGAGGGTACCGATACTTTTGTCTTTG
AGAGCTTTTTATCTTCTTCATAGGGCTGTAAGATAATGTCTTGACCATTA
GTAGTATTTTGACATCAGTGTGATAAATATCTAAATCTCAGTGTTCAAAA
GTTTTTACGAGTCAGCAGTTGTAGACCAATAAATCTATTTACTTTATCAT
TATTTGAGATAGAATTTCCAATCGGAAGGGATCAGCAAATAACTCGAGTT
TACAACTCTTCTCACCTTCTCTCTCATCGACCCTTGGGAAGTCATAATAA
AACATGCTATTTGTAATTCGCACCTCAACTTTATTGGATATGTCTTGAAA
TAGAAATGACAGTCAATTGTAAAAGAAAGAAATTTTCTTTTTGATTTACA
ATAGGAATATTTGGAATTTTTCAATCGTCTGGTGATTGTTTTATATCTGA
AATTGAAGATTATGGCTTTACTCAGAAACGGTTTCGTAAGTGTGACACTA
ATTTGAAGTAACTCATATTTGTATTCAAATGTAAGCTATTTGTTAGTCAT
CGAGTCTTTGTGATGTGTTTGTAATACACAACACTAGTAATTTCAATGGA
AATAATTGACAAGTGTTTCTTTTTTGCTGTAAAGTTGAAAATAGCAGATT
TTATCATTTCAACTATTTTTAAAAATAGTAAATGTTACCATAGAATCTAA
GTAAGTCGGAAACTCTAAGAACAAAAGAAATTGAAAAACAGGAAATGCAT
AATAGCCTCTTACAATTACTTGATCACAACAGAATAGAAATGAGTGTTCA
AAAGTTACAACAGAAGTGCTAGAAACAAAGAAATAATTAGAATAGAAATG
CCACAATGAGAAAATTTTAATCACCCCTGATTTTAAAGTTCCACTAAAAC
CTTAGGTTTGGGATAAATAAAGCATCAAACTAAAATACCATGAATATGAA
CGGATTAGAATTTCACACTTTATTCAAAGACTTGCTAATTCGTTTCAAAT
GAATCAATCTATCATTTCAGTGCTTAAAGTAGTCAAGAACTCCACAAGAT
CAAAGGAAGTCTTTAAAATGTTTTTTTTTTCGTGTACAAAAATAGCATAT
CTTTAATTGGTCTTTTGTTTTGATCAGTTATCTTGGAATATCACGTTATT
ACTACCTTGTTCAAAACGCAACATTTTTTATGTACAACTTTTTATAAGAA
TTAAATGATTTTCTTTCGTAATATCTGCAAGTTAGTTGATTTAGTCTTCA
AATATCTTGCACATAAAGTTTAAAGTCTACTTGAATAAAGAACAACGTCA
CAACGTGAAAATTAATCACATTTTTCGCTTAATCCGGTTGAAAATTGTTA
CGCTAGGCAACCTNAAGAACAACGTCACAACGTGAAAATTGATCACATTT
TTCGCTTAATCCGGTTGAAAATTGTTACGCTAGGCAACCTGAATTTCAAG
TTTAAGGAAAATAAAAAGAAGTCTTTACGACGATGCTTTAGAAACAAAAA
AAGAACAAGTATCTCTTAACCTGCCTACATCATTTCAAGGTTGCTGATTG
GCTGGTTGATTCTCTTTCTTAATTAGAAGGAGACAAATAGAATGGCTGTA
ATCCGCTTCTAATTACTTTTTATTATCTTTTGTATTGACGCAAGAATAAT
TGAATGAGCTGAACTTTTTCTTTACTAATTGCTCTAATGAATTATAACTA
AAATAATATTTCTTTTTACAATAAATGGATAAACTTTTTTTTTGTTGTAT
GAGGGTCCCAAACAATTTACTGATTAAGGGACATACAGCACTTTTTAAAT
ACTGCCATATGAACAGGACGGATTTTGAAAGTCCGTAAGGAAATGTAAAT
GTTAAAAAATGCGACGCGTGAAGACTTTGAGCGCGATTATAGGAGCATTT
TTGAATGATATTGTGCTTTCCTGCTCTCAACAAGAAGATTCCACTACTAC
TACAAGGTAAGTTCCTCATGTTCTTCTTCAACCTTAATCCTACATCTTCC
GAAAGTCATTTATTCTTCTTAGATAAAGCATTTTCTTTTCCTGAATGATG
AGTTTTTACCGAAAAATGAAGATTTTTTATATTAAAGTAAAACGATTTTA
TTGATTGCCCAAGCTCGCCCTTCAGTTCCTTTTATACATACACAATTCTA
ATATACTTATTTCAAGGTTCTAAATTATTTCTATCAAGCCAATTTATAAT
TCTGAATAAAAAGTCCAAAAATGTAATTTATAGACGGAGACTCCGTTTTA
TTGATAGAGCAAAAACATTTTGTTTATTTGTAAACGACTCAGTTAGTACT
TCTGTCTACAAAATGTTCAAGAGAGACCAACACTTTAGATTTTTTCCCTT
CATTTAGCAGCGAATACTTAAACTTAATCTTCAAATTCAACATTGAGATT
CAAATAATGAAGTAATGACGAAATAGGGAAGGGACTTGAATTAAAAAACG
TACTTTATTTCATGATCCAGTTTGTTGTTTTTCTCCTTCTTTCTTGTTTA
CCCTAACTAAGTTTACTCAACTTATTTAGGATCTCATAGTAGGAAAACTT
AGATATTGAGCGAGGGCAATCATCAATCATTACAACACAAAAGAGACCAA
ATTTAGTGGGAACTCATCACTCAGGAAAACAAAACTTGTGTGATTTAAAT
AGAGCTAAACAAATATTTTAGGTTTATATTACCCTTGCCTTTCAACTTAT
AGATCCTTAAACATGAATGTTAAAAATAACTTCTTTTTTTCTTTCTAGGT
TATTGCTGGTGTCATTATTAGGTAAAACNCAAGGTAAGTTCCTCATGTTC
TTCTTCAACCTTAATCCTACATCTTCCGAAAGTCATTTATTCTTCTTAGA
TAAAGCATTTTCTTTTCCTGAATGATGAGTTTTTACCGAAAAATGAAGAT
TTTTTATATTAAAGTAAAACGATTTTATTGATTGCCCAAGCTCGCCCTTC
AGTTCCTTTTATACATACACAATTCTAATATACTTATTTCAAGGTTCTAA
ATTATTTCTATCAAGCCAATTTATAATTCTGAATAAAAAGTCCAAAAATG
TAATTTATAGACGGAGACTCCGTTTTATTGATAGAGCAAAAACATTTTGT
TTATTTGTAAACGACTCAGTTAGTACTTCTGTCTACAAAATGTTCAAGAG
AGACCAACACTTTAGATTTTTTCCCTTCATTTAGCAGCGAATACTTAAAC
TTAATCTTCAAATTCAACATTGAGATTCAAATAATGAAGTAATGACGAAA
TAGGGAAGGGACTTGAATTAAAAAACGTACTTTATTTCATGATCCAGTTT
GTTGTTTTTCTCCTTCTTTCTTGTTTACCCTAACTAAGTTTACTCAACTT
ATTTAGGATCTCATAGTAGGAAAACTTAGATATTGAGCGAGGGCAATCAT
CAATCATTACAACACAAAAGAGACCAAATTTAGTGGGAACTCATCACTCA
GGAAAACAAAACTTGTGTGATTTAAATAGAGCTAAACAAATATTTTAGGT
TTATATTACCCTTGCCTTTCAACTTATAGACCCTTAAACATGAATGTTAA
AAATAACTTCTTTTTTTCTTTCTAGGTTATTGCTGGTGTCATTATTAGGT
AAAAGGAGTACTGAAGAGTCGTGACAGATTTTACTACAGAAATGTTAGAC
AACGTGGACGGCAACTTTACATTCCCTCATGACATGACATGTGAAGAGAT
GTTCCCAGACTTTACACCAGACGTATTTGATTATTTCTGCTCCGTTACAA
CAGACACTACTCAAACACAAAACGATACAACATTGGAATTTTTCGAACAA
GTTTGTTGTGTTGATCGCACGCCAGTTTCGGTTCAGGACGATAGCTCTAT
GCGTAAAACGCTATACATGATTTGTCATTCACAGAATTTGACAGTGGATG
TTGAAAATAACATTTGTAGAGAATTTGAACCATATTACATGCCCCCGGAA
CCGTTTACGATAACACCAGCAACGTATGTAATAATGTCACTTCTGACACC
GATTGGTTTAATGGCAAACTTATTGATTATAATGACAGTGTTGCGAGCTA
AGAAACTCAGAACAACTACTGGGTTCTTCATTTGTCACCTCGCCATCGCC
GATCTGTTATGTATCTTATCTATGATGGCATACGTGATAGCCCATTCACA
AATTGAACTGAAACAAAATTTTAATATTTTGATGATATTCTCATCATTAG
ATGTTTTTATCGGTTCAGCTTCATTGCTACACGTGACAGCTGCTAGTGTG
GAAAGAGCCATAGCTGTTGCAAAACCCATGGTGTACCCGTTGATATTGTG
CAAAGAACGAGCCAAGAAGGTGATTCTACTTATATGGGTTTATTGCATCG
TTTTATTTATCGCTTGTGTTGCTAGAGTATTCGTCAAACCAATTATCTAC
AATTCAATCATATTTTACATAGCAGTTTGTTTAAGCTTCGGTGTACCGTG
CATATTGGTATTAATTTCTTATCTGAACATCTCAATCAGAGCCTTACGGA
ATTTACAGATGGAGAAAAGAATTGAACGATCATTAATTATTGTTTCCATG
CTGAATGATACTCAAAGGAGAGCGCCGAGATATCATCATCAGATACGCGA
ATTAAAGCTAGCTNGCTTGTGTTGCTAGAGTATTCGTTAAACCAATTATC
TACAATTCAATCATATTTTACATAGCAGTTTGTTTAAGCTTCGGTGTACC
GTGCATATTGGTATTAATTTCTTATCTGAACATCTCAATCAGAGCCTTAC
GGAATTTACAGATGGAGAAAAGAATTGAACGATCATTAATTATTGTTTCC
ATGCTGAATGATACTCAAAGGAGAGCGCCGAGATATCATCATCAGATACG
CGAATTAAAGCTGGCTCTCAATTTGACCATTATGACAGCACCGTTTGTTT
TCGGTTGGGGATATTTCATGATCTGTAATGTTTATGAGGAAGTAACAAAG
ACTACATTGGATGGATTAAAAAATTGGTTCCTCAACATGTTACCTTATCT
TATCTCATGTTTAAACCCAATCACATATCTACTATTCACAAAGACTTTAC
GAAAGGAAGCTATTAAATTGGTACTGAAACCATTCAGTAAGTTCCGCTCA
CTACACCATCGACGCTTCTCATCGACATCGCTCATTTTTACCTCACGTAA
TAGTAGCAGACACTCAGACTCGTCCGACGCTCGTATGATGCAAAGGGAGG
TCTAAGCTTAAGCTAGATCCCATCATAACGATTAAGCTTTTGACTACTAA
AGCTTTATCCGATGGTAGGAGGGATTGTATTGAGTGTATTGACAAAAGAA
GAAGCAACAGGTCATAGCAGGGACACTAATTAAGTAGATAATAAAAACAA
TTATAATTCTTGTAAACATTCAGAAGTAATGGAACAAACACATTAAAACG
GAATTAAAAATGACAAATATTTCAAATCCAAAGGGACGTAAATTTGAAAT
AGGAACACGAACCAAAATTTAGAATGTAAAATATTTTTTTTCAACGTATA
TAAAAAGATTTAGAGCAATATAGCTACGGGAGATGTAAATAGAAAACATG
TTTAAAACGACCATTTATCTTTGTAAAATATTATTATCCGTGTAAATTTT
TGGCTGATAGTATAGAAAAATATCATATTTATTTGAGAATTAAAAGAAAA
CAACAAGAAAAGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_001010XLOC_001010Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001959-exon-sc0000012-1575043694:871991..872272TCONS_00001959-exon-sc0000012-1575043694:871991..872272Clytia hemisphaericaexon
TCONS_00001959-exon-sc0000012-1575043694:854410..856497TCONS_00001959-exon-sc0000012-1575043694:854410..856497Clytia hemisphaericaexon
TCONS_00001959-exon-sc0000012-1510915933:871991..872272TCONS_00001959-exon-sc0000012-1510915933:871991..872272Clytia hemisphaericaexon
TCONS_00001959-exon-sc0000012-1510915933:854410..856497TCONS_00001959-exon-sc0000012-1510915933:854410..856497Clytia hemisphaericaexon
TCONS_00001959-exon-sc0000012-1491911889:871991..872272TCONS_00001959-exon-sc0000012-1491911889:871991..872272Clytia hemisphaericaexon
TCONS_00001959-exon-sc0000012-1491911889:854410..856497TCONS_00001959-exon-sc0000012-1491911889:854410..856497Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000012supercontigsc0000012:854410..872272 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	1.15359e-09	0	0.444925	0.0909868	1.17389e-07	0	4.33719e-09	4.89787e-08	0	0.746693	1.815	1.88491	1.04045e-08	2.01134	0.419029	0.101057	4.05382	1.8925	0	1.28787e-08	0	3.75019e-10	7.2954e-09	0	0	8.04563e-09	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00001959 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top