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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00001951 ID=TCONS_00001951|Name=TCONS_00001951|organism=Clytia hemisphaerica|type=transcript|length=1031bp
cTTTGCTAAATTAATTCCTATAAACTAAATCTTTAAAACAGAATTTCATC
Tttaataaatttgatatttcagttaaatttctttttcataataattgaaa
taataaataaataaatatttataatattttgtttttagataatATATACT
CTCTCTATCATACATATTCACAAAAAAAATGATATTCGGAAAACCCGATT
GATGGGGTCAAGCCAGCTTAACTAGGatttatgtttttaataatCTTCTA
TAAAAGTTTGTCATTTTATATACATTGATGTCATTGTAGTTTTCTTTTGT
GACTGCAAAACAAAATAACTGGTCTCAAACCAGCGCATCATCagcaaatt
gaaaattaaaatctttgtaTTATTTTTCTGGTGGTGGCATGTAAAAACCA
ACCAAGTAAACACATATAGACATTCGAAGTCATTTTTCAAGGAGCATCAC
TTAAGTATCTCCTCTATtgtttgatagaaattttaatAAAGTACTTAAAA
TTCCATCTTATCACTCATCGGTCGAGAGGCGAGCGAGAGAGTCGGTTCCA
GTTCTCCGGAAACTAGATGACGGCgcatcatttcaaaaaatcttgttgct
tttgaaaattgttaacACTTTTCCGCCTCCTTTAAGCTCTTGAATTCCTC
CGACTCAAGAAATTTACTCAGGGAAATGTCCAACTTGTGTTGGTTTTGGG
ACGCAACGAGGCTCTGGTGTATCAATATTGTTGAGTTTCAAATCAAACCA
TTTTCCATTTTCACAGATGTAAACAACTGGTGGTTGGTCTTGCTCGAAAC
CGATTTGACATTCAACTAAACACATATTGCGTTCCAAAAGTGTTCCTTCG
CNCATTTTCACAGATGTAAACAACTGGTGGTTGGTCTTGCTCGAAACCGA
TTTGACATTCAACTAAACACATATTGCGTTCCAAAAGTGTCCCTTCGCTG
CACACAAAGCGGCCATGTTCTGGTTGCATGACCATTGGGCATTTTGAATG
TTCGGGTGCTCCCAAAGAGAAGGCtcctgta Run BLAST on NCBI transcript from alignment at sc0000012:758407..761139- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00001951 ID=TCONS_00001951|Name=TCONS_00001951|organism=Clytia hemisphaerica|type=transcript|length=2733bp|location=Sequence derived from alignment at sc0000012:758407..761139- (Clytia hemisphaerica)
CTTTGCTAAATTAATTCCTATAAACTAAATCTTTAAAACAGAATTTCATC
TTTAATAAATTTGATATTTCAGTTAAATTTCTTTTTCATAATAATTGAAA
TAATAAATAAATAAATATTTATAATATTTTGTTTTTAGATAATATATACT
CTCTCTATCATACATATTCACAAAAAAAATGATATTCGGAAAACCCGATT
GATGGGGTCAAGCCAGCTTAACTAGGATTTATGTTTTTAATAATCTTCTA
TAAAAGTTTGTCATTTTATATACATTGATGTCATTGTAGTTTTCTTTTGT
GACTGCAAAACAAAATAACTGGTCTCAAACCAGCGCATCATCAGCAAATT
GAAAATTAAAATCTTTGTATTATTTTTCTGGTGGTGATAGCGATCACTCC
AAGTAGGTGGCATGTAAAAACCAACCAAGTAAACACATATAGACATTCGA
AGTCATTTTTCAAGGAGCATCACTTAAGTATCTCCTCTATTGTTTGATAG
AAATTTTAATAAAGTACTTAAAATTCCATCTTATCACTCATCGGTCGAGA
GGCGAGCGAGAGAGTCGGTTCCAGTTCTCCGGAAACTAGATGACGGCGCA
TCATTTCAAAAAATCTTGTTGCTTTTGAAAATTGTTAACACTTTTCCGCC
TCCTTTAAGCTCTTGAATTCCTCCGNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNTTTTTTACATCCGAGTCTACGGAATTTATTT
TTAGCTTATAAATATACCCCTTTTGTCATTCTTTCTGTAAATATCTTACT
TTAGTTGAGCTTCCCTGAGAAAGAAGGAAACATGAAATCAAAAGAAATGA
TCGCCGTAATATCTAAACAGATAATAGAGGCGAATTGAATAGTTCATGTC
AGTTAGAGGAGCGGCAAATACTTACGTCACAAAAAAGAAATCATGTTACA
TAATTAAGCAAAATGAAGAAGAATAGAATCTATAGAAATTTACGAAATTC
CTGATGCCGTTTTTTCGCCGTCCGTCCGCTTTCTTCAAAAAACAAATATA
ATTTTGATGAACAATAGGTCAATAGTATTCCTTTGCGCTGGTGTGTGATT
TCTTTTGCAACCTAGTAATAGAGAGCATTTGTGAAAAGTGTTTCTCAAAG
CAGTGTTTTTGCATTATAATGAACAACACCCACATTAGACCACCCGAAGG
TCTAGAGAAAATCTTAGAAAATAGGGACCTGCGATGGTTAAAAAAAATTT
CCCTATGAAATGCAGTTATTCCATACAGGTACCGAAATACTTTTCTGAAA
CATTACCCGTATTATTGGATAGAGTATAAACTTGTTTGATGAGAATAAAC
CACTGCAGATTGTAGACAAGGCGAGATGACTTTTTGATATGGATTTTATG
CTGAGAATGTGACATATATCAGGATAAACCCTAGATGAAATACCCTTTTT
ATACTCCGATTAAATTCTGATTGGATAAAGGACAGGCACATTGATATAAA
TAAAATACGCAACTGATAAAATCATCAAAAATATTTCTGGAAGAGACATT
AGTAAGGCGAATAAGATCGAGATCAAAGACAGAAAAATGTCAAAATTTTG
ATTTAATTTGATTTGAATTATTTTTGTATCTTTGCTAAATTAATTCCTAT
AAACTAAATCTTTAAAACAGAATTTCATCTTTAATAAATTTGATATTTCA
GTTAAATTTCTTTTTCATAATAATTGAAATAATAAATAAATAAATATTTA
TAATATTTTGTTTTTAGATAATATATACTCTCTCTATCATACATATTCAC
AAAAAAAATGATATTCGGAAAACCCGATTGATGGGGTCAAGCCAGCTTAA
CTAGGATTTATGTTTTTAATAATCTTCTATAAAAGTTTGTCATTTTATAT
ACATTGATGTCATTGTAGTTTTCTTTTGTGACTGCAAAACAAAATAACTG
GTCTCAAACCAGCGCATCATCTGCAAATTGAAAATTAAAATCTTTGTATT
ATTTTTCTGGTGGTGATAGCGATCACTCCAAGTAGGTGGCATGTAAAAAC
CAACCAAGTAAACACATATAGACATTCGAAGTCATTTTTCAAGGAGCATC
ACTTAAGTATCTCCTCTATTGTTTGATAGAAATTTTAATAAAGTACTTAA
AATTCCATCTTATCACTCATCGGTCGAGAGGCGAGCGAGAGAGTCGGTTC
CAGTTCTCCGGAAACTAGATGACGGCGCATCATTTCAAAAAATCTTGTTG
CTTTTGAAAATTGTTAACACTTTTCCGCCTCCTTTAAGCTCTTGAATTCC
TCCGACTCAAGAAATTTACTCAGGGAAATGTCCAACTTGTGTTGGTTTTG
GGACGCAACGAGGCTCTGGTGTATCAATATTGTTGAGTTTCAAATCAAAC
CATTTTCCATTTTCACAGATGTAAACAACTGGTGGTTGGTCTTGCTCGAA
ACCGATTTGACATTCAACTAAACACATATTGCGTTCCAAAAGTGTTCCTT
CGCNCATTTTCACAGATGTAAACAACTGGTGGTTGGTCTTGCTCGAAACC
GATTTGACATTCAACTAAACACATATTGCGTTCCAAAAGTGTCCCTTCGC
TGCACACAAAGCGGCCATGTTCTGGTTGCATGACCATTGGGCATTTTGAA
TGTTCGGGTGCTCCCAAAGAGAAGGCTCCTGTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00001951-exon-sc0000012-1575043694:760757..761139 | TCONS_00001951-exon-sc0000012-1575043694:760757..761139 | Clytia hemisphaerica | exon |
| TCONS_00001951-exon-sc0000012-1575043694:758407..759054 | TCONS_00001951-exon-sc0000012-1575043694:758407..759054 | Clytia hemisphaerica | exon |
| TCONS_00001951-exon-sc0000012-1510915933:760757..761139 | TCONS_00001951-exon-sc0000012-1510915933:760757..761139 | Clytia hemisphaerica | exon |
| TCONS_00001951-exon-sc0000012-1510915933:758407..759054 | TCONS_00001951-exon-sc0000012-1510915933:758407..759054 | Clytia hemisphaerica | exon |
| TCONS_00001951-exon-sc0000012-1491911889:760757..761139 | TCONS_00001951-exon-sc0000012-1491911889:760757..761139 | Clytia hemisphaerica | exon |
| TCONS_00001951-exon-sc0000012-1491911889:758407..759054 | TCONS_00001951-exon-sc0000012-1491911889:758407..759054 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000012 | supercontig | sc0000012:758407..761139 - |
Blast
The following BLAST results are available for this feature:
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