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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00001859 ID=TCONS_00001859|Name=TCONS_00001859|organism=Clytia hemisphaerica|type=transcript|length=915bp
GTcagcaaaaagttttttcaactttttcgtttttctattttcagaaaatt
atccGATACACAACAACAACAGTCACAAGTGGATAACGGAGAAATAAACG
CCTGTCGTGATAGCGGAAGAAAAATGATTGATCGTCAGGTAAGGTGTTCT
AAGGATTTGTAAGGATTAACTTGTTCACTTTGTTACCCCTTCTCAAAGTG
TGGCTTGGGATTTGATTTTGGGGTGTTGAGAATAAAGAAAATCGTGTTGT
TCCAAGTTATAtctatacacccctgtgtcacagacccactgagaccccag
ccccactggaaaatttggcaaaactttcgtccccggtgaaaaaaataccc
ttaaatttcagccccactgggaaattgactttgatttcatccccatttga
aattcaatgtttaaaaattatactccaaaCCCATCCCTAtgcactggatt
ttttaaccttggaacaatagaatttctatccacattggaatttcaatagg
agtttttatcccaactgaggaaaaaattccaccggggctgtgagacaggt
gtGTATCCATATATCTTGAGTTAACACAAATGTTACCAACTCCGGCTATT
ATTCTGCTAAAATGGCACACGTATGAATTTAAAACGACGTTAAAATGAGT
TTAGTAGGCTCACTGAAGAAACATGTATATAAACAGTTTGAGTTACGTAA
AACCCTATCATGTGGAGTAGCTCTCTGGGTTAACTGTGAGCTTAGCGTCC
ATTTTTGTTTgtccttttgttttgtttatttcgtGACGTCATCATAATGG
CGGCTCTATTGAGTGACTCGCAGTCAGTGTACTGCTGTGCTTCAAACAGG
TTTTTTTGTATTGCAATTGATTTGTAGACTAGAACTTAACCTCGTTAAAG
CTTGGCGGTGAGCTA Run BLAST on NCBI transcript from alignment at sc0000012:1014046..1014960+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00001859 ID=TCONS_00001859|Name=TCONS_00001859|organism=Clytia hemisphaerica|type=transcript|length=915bp|location=Sequence derived from alignment at sc0000012:1014046..1014960+ (Clytia hemisphaerica)
GTcagcaaaaagttttttcaactttttcgtttttctattttcagaaaatt
atccGATACACAACAACAACAGTCACAAGTGGATAACGGAGAAATAAACG
CCTGTCGTGATAGCGGAAGAAAAATGATTGATCGTCAGGTAAGGTGTTCT
AAGGATTTGTAAGGATTAACTTGTTCACTTTGTTACCCCTTCTCAAAGTG
TGGCTTGGGATTTGATTTTGGGGTGTTGAGAATAAAGAAAATCGTGTTGT
TCCAAGTTATAtctatacacccctgtgtcacagacccactgagaccccag
ccccactggaaaatttggcaaaactttcgtccccggtgaaaaaaataccc
ttaaatttcagccccactgggaaattgactttgatttcatccccatttga
aattcaatgtttaaaaattatactccaaaCCCATCCCTAtgcactggatt
ttttaaccttggaacaatagaatttctatccacattggaatttcaatagg
agtttttatcccaactgaggaaaaaattccaccggggctgtgagacaggt
gtGTATCCATATATCTTGAGTTAACACAAATGTTACCAACTCCGGCTATT
ATTCTGCTAAAATGGCACACGTATGAATTTAAAACGACGTTAAAATGAGT
TTAGTAGGCTCACTGAAGAAACATGTATATAAACAGTTTGAGTTACGTAA
AACCCTATCATGTGGAGTAGCTCTCTGGGTTAACTGTGAGCTTAGCGTCC
ATTTTTGTTTgtccttttgttttgtttatttcgtGACGTCATCATAATGG
CGGCTCTATTGAGTGACTCGCAGTCAGTGTACTGCTGTGCTTCAAACAGG
TTTTTTTGTATTGCAATTGATTTGTAGACTAGAACTTAACCTCGTTAAAG
CTTGGCGGTGAGCTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00001859-exon-sc0000012-1491911889:1014046..1014960 | TCONS_00001859-exon-sc0000012-1491911889:1014046..1014960 | Clytia hemisphaerica | exon |
| TCONS_00001859-exon-sc0000012-1510915933:1014046..1014960 | TCONS_00001859-exon-sc0000012-1510915933:1014046..1014960 | Clytia hemisphaerica | exon |
| TCONS_00001859-exon-sc0000012-1575043694:1014046..1014960 | TCONS_00001859-exon-sc0000012-1575043694:1014046..1014960 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000012 | supercontig | sc0000012:1014046..1014960 + |
Blast
The following BLAST results are available for this feature:
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