TCONS_00001804 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00001804
Unique Name	TCONS_00001804
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1889

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at sc0000012:722587..729559+
coding sequence from alignment at sc0000012:722587..729559+

transcript sequence

>TCONS_00001804 ID=TCONS_00001804|Name=TCONS_00001804|organism=Clytia hemisphaerica|type=transcript|length=1889bp
TTTCAGCATTAAATTAAAAGTACTAACAACTATTTCAACACAATATTAAC
GACAATGAAACTGGTCGATATCAcaaaagcttttcaaaatgcAAGAAAGT
ATACCAAAGATATCAATGAAACAGATTGTCTGAATGCTATCCAGAAACTG
AAGCTATCAAACTACAAGGATATTCCCAGTATCCCACTCAACAAGGTGAA
AGAATTGTTTGTGCAGCTTCTTGGAGATGGTTTTCATTTGGATGATACGA
AATTTAAAGAAGTTCAAGATTTTCTTTCCAATTGCACAttgAAGAAAATG
GTCGACGAGCGACTATTAGCTAAGGTGCTGAGATATCTTCTTCGAAAGGA
TAGTACCAAAAAGGTTGCACTTTTGATAGTGGAtgtacagaacgatttta
tcaGTGGTTCACTAGCCTTGAAACATTCACCAGCCTGTGAGGATGGTGTT
GATGTTGTACCCGTCATCAATCAAATGGttcaaatgaaatttcatttctt
tgtaTATACAATGGATTGGCATCCACAAGATCATATCTCGTTTATCACCA
ATGTTTCAAGGTATGATCTACATCCAACATCGAAGGTTCCGATTGCCAAA
GATGCAAAGACTTTTGATTTGGTCACTTTTGCTGGTGATGGTGACCCTTT
TGATCAAGTCTTATGGCCAGCACATTGCATACAAGGAACTGAAGGTGCTG
AACTACATCCAGAATTAATAGAAATCAAAGCTGATAATTCAATGCGTCTA
CTCAAAGGAACCGATCCAAAAGTGGATAGCTATAGTGCGTTCTGGGATAA
CAATCATACACACCAAACGAAGCTTTTCTCAGAACTGGTCGATCGTGATA
TTACAGATATCGTTGTTTGTGGATTAGCAACCGATATCTGTGTCAAGTTC
ACTGCAATTGATGGTCAGAAACATGGCTTCAACACTACAGTTGTTCTGGA
TGCGTGTCGTGGTGTTGCTCATGAAGGCATTGAAACTGCCAGGTGTGAGC
AACAAGCTTGCGGTATCAAAATTATTGTTAGCTCTGAGGTTTCATCCTTG
TTGGCCTAAGCTATTGACATCGCTAAGAGAAGACTGAATAAAGTTTACTG
GCTAGAATCACACTCAGTAGTGTATGAAGCATTTTTAATATTGGGAGGGG
GTGACACCGTGGGTGCCGACCATGCTTTGATCTGAGGGGGGATTGGGAAA
TTTGCAAAATAGGCCTCTATATTTTCTCTAATGTTTTAGATAGTCGTCTT
TAAGAAACCATctctgaaaaaattattgggaaaagccccccccctgcACC
CCCGGCGGTTACTACGGCATTGTACTCAATATGAAGGGAAGGGGCAGTTT
TTTGGGAATATGTACGTCACTTGTAATTAATTTGTAATTCAATTAATTTA
TTgtctttttagactttttttttattattttctattATGTTTTTAGGGTT
TAAATCGAACACCcaaatagaacaaaaaattatttgccCTTCGGGATAGC
AGATATTCCGCTCAATAGCCGGAAAATTAACAGCtcggatggttttggag
tgtttCTTCTGATTGATTTTCAAATAGGAATTTCCCAGTTGgagctgaaa
ttgtagggtatttctTCCACCGCGGATGACCTAAATTACTagcatagtgt
gcaagggggctCCAGGTCCCGCCTaaccctaaaattcccaccctcaatcc
agactcccagatcccagctaaaaatgttATCCCCACGAAAAATTATACTA
GTTCGAGGAAATAAacgaaaatttttacagtataataataaaaaggagaa
aactttAGCTTAGTTtagtaaaagaattatttatagaacatagaatttag
aaaaaattataattatattgaaaataagaaaaaacaaac

Run BLAST on NCBI

protein sequence of TCONS_00001804-protein

>TCONS_00001804-protein ID=TCONS_00001804-protein|Name=TCONS_00001804-protein|organism=Clytia hemisphaerica|type=polypeptide|length=334bp
MKLVDITKAFQNARKYTKDINETDCLNAIQKLKLSNYKDIPSIPLNKVKE
LFVQLLGDGFHLDDTKFKEVQDFLSNCTLKKMVDERLLAKVLRYLLRKDS
TKKVALLIVDVQNDFISGSLALKHSPACEDGVDVVPVINQMVQMKFHFFV
YTMDWHPQDHISFITNVSRYDLHPTSKVPIAKDAKTFDLVTFAGDGDPFD
QVLWPAHCIQGTEGAELHPELIEIKADNSMRLLKGTDPKVDSYSAFWDNN
HTHQTKLFSELVDRDITDIVVCGLATDICVKFTAIDGQKHGFNTTVVLDA
CRGVAHEGIETARCEQQACGIKIIVSSEVSSLLA

Run BLAST on NCBI

transcript from alignment at sc0000012:722587..729559+

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00001804 ID=TCONS_00001804|Name=TCONS_00001804|organism=Clytia hemisphaerica|type=transcript|length=6973bp|location=Sequence derived from alignment at sc0000012:722587..729559+ (Clytia hemisphaerica)
TTTCAGCATTAAATTAAAAGTACTAACAACTATTTCAACACAATATTAAC
GACAATGAAACTGGTCGATATCAcaaaagcttttcaaaatgcAAGAAAGT
ATACCAAAGATATCAATGAAACAGATTGTCTGAATGCTATCCAGAAACTG
AAGCTGTGAGTTTCTAATCTCTATCTATATCTTTATAACCATTGAGACTT
ACATTTTACAGTTCAGTAGAAGACCTAACAGACTTTGCCTGACTGACATA
AATTTCacccaaaaaacaaaaacaaacaagaaaACATGTGCAGGTCCTTA
TGGGAAATATTTTACCTTAAAGCAAGGTTTAACTAAATCACACTGTGCAT
ATTCTTACTGCTGTTTCTCATCTTTACGTTTGATATAAACCTCTATATTC
TTTCGTTCCAGAGGTCTTTGTTACAAGTTAGAAATTGGTTATCCTTTTGT
TTTTCTCAGATCAAACTACAAGGATATTCCCAGTATCCCACTCAACAAGG
TGAAAGAATTGTTTGTGCAGCTTCTTGGAGATGGTTTTCATTTGGATGAT
ACGAAATTTAAAGAAGTTCAAGATTTTCTTTCCAATTGCACAGTAAGATT
TATCATTTGTTATCTTAGTTGTCCCTTTTATAGCAGTTTGAACTACCTAC
CTACAGTGCGTCTAAAAAAATGATTTACCGAGTGTCTCAGAAAAAAGTCT
CCCACTTTCGGTATAATATACCCtcgttttttgcattttttaactATTTT
GATATCAAATCTCTAGAAATTACACGGTTTTAAGGTACAATCTTTGATCT
TTCTTTGTTATAAAAGTAGCATTTGATTGACTGCTTCTACCATACAAATG
GTAGATCCCAAACCtacgaaaaaaataaactatGTACTCAACTAATAAAC
TCTTGTATGGTTTGCATTGAAAGacttgtctttgttttttagttgAAGAA
AATGGTCGACGAGCGACTATTAGCTAAGGTGCTGAGATATCTTCTTCGAA
AGGTAATTGtctttttagaatattttagaaaatcgTTGTGCGCACTTTCT
TCGTGAAGTTTCTAAAGATTCAAATCGCTTCACACTTCTTCCCTATTCTG
ATGCAAGGCTAGATGCATTATATTATTAAAGTAACTTGAAAAATGACTCT
TTATTGAAACTCCTTGCTTCAACCCATTTTGTTATATATAAAACTAGACA
GGAACACGTCGGCGTTTTAAATCTGATGTATACTCATTTCACCATCATTA
TAtgaagaagaaatcatagcatagATCCAGGCTAATACAAGACATAAACA
ACATCCGCCTTAGTGTCCATAGCAtccattttgatgacgttttgTGTTTC
TAACTGAATATTGTGATGACGAAAGAGCCTGGTGCACAACggtccaaatt
tttcaaaagttctcTGCTATCTTATAAAGGAAGATATTTACGCGGGAAGN
TTTTTCAAAAGTTCTCTGCTATCTTATAAAGGAAGATATTTacgcgggaa
gaaattttctcggaatttaatttcgccgTTCACAGCACAAAATTCGGAAG
TTTCGCGGttgagagacttttttgtttataataatatggcctattttgcc
ttaaaaagaccaattttagaggtGAATTGTCAATTCCTTAGAACATTCTT
GTTACTCTATATGTAAATATATTTTCAGCATGAGGCTACCGTGTCGAATA
TCGAATCATCCGCCACTACATTTAGCCCAAAACCGTTATTTCCTTTGACG
AGACGTGTATTTGTCAGTTTGAATCAAATCATTCTCCACTAAAACCACAC
TAACTAGCAAACTTTGTTTCAGAACTTATTACTGTTATTCCAATGGCGGT
TTGTCGgctgcccacgctaaagctctaaaggagcgggccgaTTTCCCATC
GGAAAGATAAGTCGACCTTcgatgtgccgcatccccagtcgggtttAGCT
ACCCTTGGCCTAAACCTGAAAATATTTCGGCTGGACCCGCTAacccccga
aaacgagggctgagTTACCGCTGCAGCatccttgacgcggtcttgcaaaa
ttccatCATCTAAACCttaattttcccgaccttcagaacTTTAGCGTGTC
AGTTGAAATTTCTACATCTAATGAGTGCCAGATAATTTCAGAACTGTACC
GTTAACATATCTTTTTTTTAGGATAGTACCAAAAAGGTTGCACTTTTGAT
AGTGGAtgtacagaacgattttatcaGTGGTTCACTAGCCTTGAAACATT
CACCAGCCTGTGAGGATGGTGTTGATGTTGTACCCGTCATCAATCAAATG
GttcaaatgaaatttcatttctttgtaTATACAATGGATTGGCATCCACA
AGATCATATCTCGTTTATCACCAATGTTTCAAGGTacttcgttttttttt
gtttatagttTAATACACAATAGGCTGTTTTAACCCTTTAACAGCCGTGG
CATTTTTTTACAccctcgacctatttgccaatgtcggcatatgccgacat
gggcaaaaggtagcgattttcacttcattttctgaataatgTATGAAGTA
TCAGTCAAGGACTAAAATTGTGAGTTGAACATTGTAGAATATAGTTATTT
Tgcaacatagaaaagtttttaactattcatttttttcatttcaaaccatc
taatacaaaatctttgtagaagtgttaaattttgcagcaaagaaatggaa
atttcacatgtcggcatatgccgacaatggcaaggaaatcaaaaatgctc
atgtcggcataggcacggaaagggttaagcaTGTTCATAtcttctacaat
cagtgccgaaatatattggtAATTTTGGGAGgggttactctcgggtacct
aatagccggggggattggaataagggggggggggggggNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNaaggaggctaatacagcagaatttaCCCGAGAGTAAGT
GGTTTCAGGCTATGTTCTCAGCCACATTGGAATATTGGAATATTTTGAGC
tattagatcctgagatcctaagatCGCTAAGTCTAATGtgaaaactcaga
gttaaaattttactttctaACTTACTTCAAAGCACATAATAATCACTTGT
GGCTTTGAAGTTTTGGGGggattccccttttgtgccaaatatttcggcgc
cgattgtagaGGGATTTTTATTTGACTCATTCGAGTAAGAAATGTAAGAG
AGACCTTCCAATATTCAGAGCTCCTTTCATCTTCTagtgatttaaaaaaa
cgttATAATTATAATAGAAAGCTAGAGAGAAACTCCCAAAAATTGCTTAC
AGTAATTATACAATCCCTTAAAAGGTATGATCTACATCCAACATCGAAGG
TTCCGATTGCCAAAGATGCAAAGACTTTTGATTTGGTCACTTTTGCTGGT
GATGGTGACCCTTTTGATCAAGTCTTATGGCCAGCACATTGCATACAAGG
AACTGAAGGTGCTGAACTACATCCAGAATTAATAGTGAGTATTCTTCTTt
tgaaatcgccgtttttctggattttcattggactttttccatataattgg
ttgttttttcattcaaaaacattattaatagcaatgcccaccatcaagca
tgtTTCAATTTTCAATAAAATTGATTTTTGAAGCCGGAACAtctaaaaat
cgccggaacaaccgattttcgccggaaaaatggtatttcttgaatttctt
gagctgtactttatatattttcatgaaattttgcacactgatgcaaaatg
tcaatacctaaattgtgagggagaccgattttcgaaaaacgttttttccg
gccgaaaatgccggaaatatgccggaaaaaccggttttttgacattttgt
cgaattttcatcttttgttttttagattttttgcagagagatgcgtattc
gcaatgctcaaaaaatggccgagttcgattttcgagaaaaaaattttccg
gttgaaaatgccggaaatcgccgtttttgcagattttcattggatttttt
ccttatatttctatgtttttcacacaaaaacattattgataacaatgctc
accatcaagcatgattcaattgtcaataaaagtgatttttgcgaccagaa
cttcctatttatttttccctacaacccttccctctccccccatcaccAAT
CAATGAGGAATTctttgtgttgtgtattttcgctaaacgctatattttct
gactgatttttttcatttttcttttcgcattgctatctaactttcatcat
caggtaggtccattcagcatgttacTTGTTTACGTTCTGAGTTTTAAGAA
TATTAAATTCATCTATCTAATTTTATCTGGAGGTTCCTACAGGAaagttg
tctgtacacagaccgtgtatttacggctaatttcaaaattcattactATG
AAGTGATAAACGTGTGATGCATTCTGGTACAGAACAGGGAAGGGGTCCGT
GTAACAGTTTTTGGAGGAGATGAAATTAAGGTgtactgaaataaaaaaaa
tctgagGGATTCCAAAAAGTGAAGATAAAACCTAAGAGGTCCCCAGAAAA
GtcgaagaattttttttcgtaaAGGACCTCTCNTAAGTTACCCTCCCATG
GATGTTATTGGGACCCCCGCccactttttaaaaatactttGCGTTGTTAA
AAGAAAGGTCCCTTATTTTTGCTCTGAGTAGGACGATAACTTAGACTGAC
TCCTATTTTGCCCTTGTATTTTGTATCCTCTATTTTCTCCAATAATATGA
TCAGAATCGAGATGAAATTGATTACTTGCTGGCTCTTTACTTAATATTGA
AATGAATCATTTGGTTTTCttcaatttcgaatgttttgattttgtcttTG
TATGCCATTTTTGTCAATCAGaggtgacgtaatgttttcaacCATCGGAT
TGTTCTATTGGTTCTTTTCGATTTCAATTAGgtttctgattggtcaaaaa
aCACTAGAAATCACTGAAGCGTAAAATCTGAGCAAATAATTCGAATCATG
ACATTTGCGTCACGAGTTCCGGAAAAGCGATCGTTTTGTTTGGATATGTG
TAGACAAGAGTGGGggtatttttttgagttttaaaagattttttttcttt
tctggtGTGGTGTACATTCAATCAAGCTCTCGAGGTAACAGGTTTGGACT
TTCGATTTTGCTGTTGTTGAGCTATGATAGCGGATCTGAAATCTTCGAGT
ATTATAATTGTCTGACAATTCAGGACTTTTTTCACTGTTCTTaagttttt
tcaagttttgaatgAGTTTCTTTCGTAGTATGAAATCTCTGTCTGTCTGT
CCGTACAGTTTAGATACTAAtaaatgatttttgttttgctagTAGGTGTA
AGAGGGTTTTTGTTAAACAGCCCTTTAACCCAAGATTTCCGGCCATACTC
TCACGACCTAGTCCTACCGAGTAATATTTTCATCAGTATTATTTAGGCAC
CAAAttggggaaagtgacgaaattttcctccCAATCAATTTCATTGAACT
ATGACAAAATTGTCTGATGATGTATACTGTGATGTATGTGCTTATTATAA
GCTTTTTATGAAACATCTTATTTCACCTTTTGCTCTGAATATTTACGact
caaatgaaatttttcacactacTGTAACCTTTTTGTTGTATTGTGACATA
TTAAAAGAGTGTCCAGATTTTCTATCCTGgcaacatttttattccaattc
TCAGGAAATCAAAGCTGATAATTCAATGCGTCTACTCAAAGGAACCGATC
CAAAAGTGGATAGCTATAGTGCGTTCTGGGATAACAATCATACACACCAA
ACGAAGCTTTTCTCAGAACTGGTCGATCGTGATATTACAGATATCGTTGT
TTGTGGATTAGCAACCGATATCTGTGTCAAGTTCACTGCAATTGATGGTC
AGAAACATGGCTTCAACACTACAGTTGTTCTGGATGCGTGTCGTGGTGTT
GCTCATGAAGGCATTGAAACTGCCAGGTGTGAGCAACAAGCTTGCGGTAT
CAAAATTATTGTTAGCTCTGAGGTTTCATCCTTGTTGGCCTAAGCTATTG
ACATCGCTAAGAGAAGACTGAATAAAGTTTACTGGCTAGAATCACACTCA
GTAGTGTATGAAGCATTTTTAATATTGGGAGGGGGTGACACCGTGGGTGC
CGACCATGCTTTGATCTGAGGGGGGATTGGGAAATTTGCAAAATAGGCCT
CTATATTTTCTCTAATGTTTTAGATAGTCGTCTTTAAGAAACCATctctg
aaaaaattattgggaaaagccccccccctgcACCCCCGGCGGTTACTACG
GCATTGTACTCAATATGAAGGGAAGGGGCAGTTTTTTGGGAATATGTACG
TCACTTGTAATTAATTTGTAATTCAATTAATTTATTgtctttttagactt
tttttttattattttctattATGTTTTTAGGGTTTAAATCGAACACCcaa
atagaacaaaaaattatttgccCTTCGGGATAGCAGATATTCCGCTCAAT
AGCCGGAAAATTAACAGCtcggatggttttggagtgtttCTTCTGATTGA
TTTTCAAATAGGAATTTCCCAGTTGgagctgaaattgtagggtatttctT
CCACCGCGGATGACCTAAATTACTagcatagtgtgcaagggggctCCAGG
TCCCGCCTaaccctaaaattcccaccctcaatccagactcccagatccca
gctaaaaatgttATCCCCACGAAAAATTATACTAGTTCGAGGAAATAAac
gaaaatttttacagtataataataaaaaggagaaaactttAGCTTAGTTt
agtaaaagaattatttatagaacatagaatttagaaaaaattataattat
attgaaaataagaaaaaacaaac

Coding sequence (CDS) from alignment at sc0000012:722587..729559+

>TCONS_00001804 ID=TCONS_00001804|Name=TCONS_00001804|organism=Clytia hemisphaerica|type=CDS|length=6030bp|location=Sequence derived from alignment at sc0000012:722587..729559+ (Clytia hemisphaerica)
ATGAAACTGGTCGATATCAcaaaagcttttcaaaatgcAAGAAAGTATAC
CAAAGATATCAATGAAACAGATTGTCTGAATGCTATCCAGAAACTGAAGC
TATCAAACTACAAGGATATTCCCAGTATCCCACTCAACAAGGTGAAAGAA
TTGTTTGTGCAGCTTCTTGGAGATGGTTTTCATTTGGATGATACGAAATT
TAAAGAAGTTCAAGATTTTCTTTCCAATTGCACAttgAAGAAAATGGTCG
ACGAGCGACTATTAGCTAAGGTGCTGAGATATCTTCTTCGAAAGGATAGT
ACCAAAAAGGTTGCACTTTTGATAGTGGAtgtacagaacgattttatcaG
TGGTTCACTAGCCTTGAAACATTCACCAGCCTGTGAGGATGGTGTTGATG
TTGTACCCGTCATCAATCAAATGGttcaaatgaaatttcatttctttgta
TATACAATGGATTGGCATCCACAAGATCATATCTCGTTTATCACCAATGT
TTCAAGGTATGATCTACATCCAACATCGAAGGTTCCGATTGCCAAAGATG
CAAAGACTTTTGATTTGGTCACTTTTGCTGGTGATGGTGACCCTTTTGAT
CAAGTCTTATGGCCAGCACATTGCATACAAGGAACTGAAGGTGCTGAACT
ACATCCAGAATTAATAGAAATCAAAGCTGATAATTCAATGCGTCTACTCA
AAGGAACCGATCCAAAAGTGGATAGCTATAGTGCGTTCTGGGATAACAAT
CATACACACCAAACGAAGCTTTTCTCAGAACTGGTCGATCGTGATATTAC
AGATATCGTTGTTTGTGGATTAGCAACCGATATCTGTGTCAAGTTCACTG
CAATTGATGGTCAGAAACATGGCTTCAACACTACAGTTGTTCTGGATGCG
TGTCGTGGTGTTGCTCATGAAGGCATTGAAACTGCCAGGTGTGAGCAACA
AGCTTGCGGTATCAAAATTATTGTTAGCTCTGAGGTTTCATCCTTGTTGG
CCTAAATGAAACTGGTCGATATCAcaaaagcttttcaaaatgcAAGAAAG
TATACCAAAGATATCAATGAAACAGATTGTCTGAATGCTATCCAGAAACT
GAAGCTATCAAACTACAAGGATATTCCCAGTATCCCACTCAACAAGGTGA
AAGAATTGTTTGTGCAGCTTCTTGGAGATGGTTTTCATTTGGATGATACG
AAATTTAAAGAAGTTCAAGATTTTCTTTCCAATTGCACAttgAAGAAAAT
GGTCGACGAGCGACTATTAGCTAAGGTGCTGAGATATCTTCTTCGAAAGG
ATAGTACCAAAAAGGTTGCACTTTTGATAGTGGAtgtacagaacgatttt
atcaGTGGTTCACTAGCCTTGAAACATTCACCAGCCTGTGAGGATGGTGT
TGATGTTGTACCCGTCATCAATCAAATGGttcaaatgaaatttcatttct
ttgtaTATACAATGGATTGGCATCCACAAGATCATATCTCGTTTATCACC
AATGTTTCAAGGTATGATCTACATCCAACATCGAAGGTTCCGATTGCCAA
AGATGCAAAGACTTTTGATTTGGTCACTTTTGCTGGTGATGGTGACCCTT
TTGATCAAGTCTTATGGCCAGCACATTGCATACAAGGAACTGAAGGTGCT
GAACTACATCCAGAATTAATAGAAATCAAAGCTGATAATTCAATGCGTCT
ACTCAAAGGAACCGATCCAAAAGTGGATAGCTATAGTGCGTTCTGGGATA
ACAATCATACACACCAAACGAAGCTTTTCTCAGAACTGGTCGATCGTGAT
ATTACAGATATCGTTGTTTGTGGATTAGCAACCGATATCTGTGTCAAGTT
CACTGCAATTGATGGTCAGAAACATGGCTTCAACACTACAGTTGTTCTGG
ATGCGTGTCGTGGTGTTGCTCATGAAGGCATTGAAACTGCCAGGTGTGAG
CAACAAGCTTGCGGTATCAAAATTATTGTTAGCTCTGAGGTTTCATCCTT
GTTGGCCTAAATGAAACTGGTCGATATCAcaaaagcttttcaaaatgcAA
GAAAGTATACCAAAGATATCAATGAAACAGATTGTCTGAATGCTATCCAG
AAACTGAAGCTATCAAACTACAAGGATATTCCCAGTATCCCACTCAACAA
GGTGAAAGAATTGTTTGTGCAGCTTCTTGGAGATGGTTTTCATTTGGATG
ATACGAAATTTAAAGAAGTTCAAGATTTTCTTTCCAATTGCACAttgAAG
AAAATGGTCGACGAGCGACTATTAGCTAAGGTGCTGAGATATCTTCTTCG
AAAGGATAGTACCAAAAAGGTTGCACTTTTGATAGTGGAtgtacagaacg
attttatcaGTGGTTCACTAGCCTTGAAACATTCACCAGCCTGTGAGGAT
GGTGTTGATGTTGTACCCGTCATCAATCAAATGGttcaaatgaaatttca
tttctttgtaTATACAATGGATTGGCATCCACAAGATCATATCTCGTTTA
TCACCAATGTTTCAAGGTATGATCTACATCCAACATCGAAGGTTCCGATT
GCCAAAGATGCAAAGACTTTTGATTTGGTCACTTTTGCTGGTGATGGTGA
CCCTTTTGATCAAGTCTTATGGCCAGCACATTGCATACAAGGAACTGAAG
GTGCTGAACTACATCCAGAATTAATAGAAATCAAAGCTGATAATTCAATG
CGTCTACTCAAAGGAACCGATCCAAAAGTGGATAGCTATAGTGCGTTCTG
GGATAACAATCATACACACCAAACGAAGCTTTTCTCAGAACTGGTCGATC
GTGATATTACAGATATCGTTGTTTGTGGATTAGCAACCGATATCTGTGTC
AAGTTCACTGCAATTGATGGTCAGAAACATGGCTTCAACACTACAGTTGT
TCTGGATGCGTGTCGTGGTGTTGCTCATGAAGGCATTGAAACTGCCAGGT
GTGAGCAACAAGCTTGCGGTATCAAAATTATTGTTAGCTCTGAGGTTTCA
TCCTTGTTGGCCTAAATGAAACTGGTCGATATCAcaaaagcttttcaaaa
tgcAAGAAAGTATACCAAAGATATCAATGAAACAGATTGTCTGAATGCTA
TCCAGAAACTGAAGCTATCAAACTACAAGGATATTCCCAGTATCCCACTC
AACAAGGTGAAAGAATTGTTTGTGCAGCTTCTTGGAGATGGTTTTCATTT
GGATGATACGAAATTTAAAGAAGTTCAAGATTTTCTTTCCAATTGCACAt
tgAAGAAAATGGTCGACGAGCGACTATTAGCTAAGGTGCTGAGATATCTT
CTTCGAAAGGATAGTACCAAAAAGGTTGCACTTTTGATAGTGGAtgtaca
gaacgattttatcaGTGGTTCACTAGCCTTGAAACATTCACCAGCCTGTG
AGGATGGTGTTGATGTTGTACCCGTCATCAATCAAATGGttcaaatgaaa
tttcatttctttgtaTATACAATGGATTGGCATCCACAAGATCATATCTC
GTTTATCACCAATGTTTCAAGGTATGATCTACATCCAACATCGAAGGTTC
CGATTGCCAAAGATGCAAAGACTTTTGATTTGGTCACTTTTGCTGGTGAT
GGTGACCCTTTTGATCAAGTCTTATGGCCAGCACATTGCATACAAGGAAC
TGAAGGTGCTGAACTACATCCAGAATTAATAGAAATCAAAGCTGATAATT
CAATGCGTCTACTCAAAGGAACCGATCCAAAAGTGGATAGCTATAGTGCG
TTCTGGGATAACAATCATACACACCAAACGAAGCTTTTCTCAGAACTGGT
CGATCGTGATATTACAGATATCGTTGTTTGTGGATTAGCAACCGATATCT
GTGTCAAGTTCACTGCAATTGATGGTCAGAAACATGGCTTCAACACTACA
GTTGTTCTGGATGCGTGTCGTGGTGTTGCTCATGAAGGCATTGAAACTGC
CAGGTGTGAGCAACAAGCTTGCGGTATCAAAATTATTGTTAGCTCTGAGG
TTTCATCCTTGTTGGCCTAAATGAAACTGGTCGATATCAcaaaagctttt
caaaatgcAAGAAAGTATACCAAAGATATCAATGAAACAGATTGTCTGAA
TGCTATCCAGAAACTGAAGCTATCAAACTACAAGGATATTCCCAGTATCC
CACTCAACAAGGTGAAAGAATTGTTTGTGCAGCTTCTTGGAGATGGTTTT
CATTTGGATGATACGAAATTTAAAGAAGTTCAAGATTTTCTTTCCAATTG
CACAttgAAGAAAATGGTCGACGAGCGACTATTAGCTAAGGTGCTGAGAT
ATCTTCTTCGAAAGGATAGTACCAAAAAGGTTGCACTTTTGATAGTGGAt
gtacagaacgattttatcaGTGGTTCACTAGCCTTGAAACATTCACCAGC
CTGTGAGGATGGTGTTGATGTTGTACCCGTCATCAATCAAATGGttcaaa
tgaaatttcatttctttgtaTATACAATGGATTGGCATCCACAAGATCAT
ATCTCGTTTATCACCAATGTTTCAAGGTATGATCTACATCCAACATCGAA
GGTTCCGATTGCCAAAGATGCAAAGACTTTTGATTTGGTCACTTTTGCTG
GTGATGGTGACCCTTTTGATCAAGTCTTATGGCCAGCACATTGCATACAA
GGAACTGAAGGTGCTGAACTACATCCAGAATTAATAGAAATCAAAGCTGA
TAATTCAATGCGTCTACTCAAAGGAACCGATCCAAAAGTGGATAGCTATA
GTGCGTTCTGGGATAACAATCATACACACCAAACGAAGCTTTTCTCAGAA
CTGGTCGATCGTGATATTACAGATATCGTTGTTTGTGGATTAGCAACCGA
TATCTGTGTCAAGTTCACTGCAATTGATGGTCAGAAACATGGCTTCAACA
CTACAGTTGTTCTGGATGCGTGTCGTGGTGTTGCTCATGAAGGCATTGAA
ACTGCCAGGTGTGAGCAACAAGCTTGCGGTATCAAAATTATTGTTAGCTC
TGAGGTTTCATCCTTGTTGGCCTAAATGAAACTGGTCGATATCAcaaaag
cttttcaaaatgcAAGAAAGTATACCAAAGATATCAATGAAACAGATTGT
CTGAATGCTATCCAGAAACTGAAGCTATCAAACTACAAGGATATTCCCAG
TATCCCACTCAACAAGGTGAAAGAATTGTTTGTGCAGCTTCTTGGAGATG
GTTTTCATTTGGATGATACGAAATTTAAAGAAGTTCAAGATTTTCTTTCC
AATTGCACAttgAAGAAAATGGTCGACGAGCGACTATTAGCTAAGGTGCT
GAGATATCTTCTTCGAAAGGATAGTACCAAAAAGGTTGCACTTTTGATAG
TGGAtgtacagaacgattttatcaGTGGTTCACTAGCCTTGAAACATTCA
CCAGCCTGTGAGGATGGTGTTGATGTTGTACCCGTCATCAATCAAATGGt
tcaaatgaaatttcatttctttgtaTATACAATGGATTGGCATCCACAAG
ATCATATCTCGTTTATCACCAATGTTTCAAGGTATGATCTACATCCAACA
TCGAAGGTTCCGATTGCCAAAGATGCAAAGACTTTTGATTTGGTCACTTT
TGCTGGTGATGGTGACCCTTTTGATCAAGTCTTATGGCCAGCACATTGCA
TACAAGGAACTGAAGGTGCTGAACTACATCCAGAATTAATAGAAATCAAA
GCTGATAATTCAATGCGTCTACTCAAAGGAACCGATCCAAAAGTGGATAG
CTATAGTGCGTTCTGGGATAACAATCATACACACCAAACGAAGCTTTTCT
CAGAACTGGTCGATCGTGATATTACAGATATCGTTGTTTGTGGATTAGCA
ACCGATATCTGTGTCAAGTTCACTGCAATTGATGGTCAGAAACATGGCTT
CAACACTACAGTTGTTCTGGATGCGTGTCGTGGTGTTGCTCATGAAGGCA
TTGAAACTGCCAGGTGTGAGCAACAAGCTTGCGGTATCAAAATTATTGTT
AGCTCTGAGGTTTCATCCTTGTTGGCCTAA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_000967	XLOC_000967	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00001804-protein	TCONS_00001804-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000012	supercontig	sc0000012:722587..729559 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
22.2581	23.8468	25.4886	23.9074	6.8633	5.78353	5.3476	6.08651	6.17031	6.07482	6.87428	5.13877	2.69984	2.48202	4.31688	7.23212	6.07169	7.14947	2.71628	3.71155	6.14576	5.76631	13.9468	12.7897	3.00609	3.83689	8.10784	7.6331	9.07089	8.1433

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR000868	Isochorismatase-like

Vocabulary: **Molecular Function**
Term	Definition
GO:0003824	catalytic activity

Vocabulary: **Biological Process**
Term	Definition
GO:0008152	metabolic process

GO Annotation

GO Assignments

This transcript is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
molecular_function	GO:0003824	catalytic activity

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00001804 vs. Swiss-Prot (Human)

BLAST of TCONS_00001804 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

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TCONS_00001804 (transcript) - C. hemisphaerica