TCONS_00001799 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001799
Unique NameTCONS_00001799
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2345

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001799 ID=TCONS_00001799|Name=TCONS_00001799|organism=Clytia hemisphaerica|type=transcript|length=2345bp
CTTGTTATCGTTACAGAGTTGTTTGGTGCTCAGGGAGCTGAATTCTTAAA
AAGTTTTGGAGCGCATCACAATTTCTTTGAAATCAACGCGTTTTTCATTG
GATTAAAAaCTACCATCTTGAAAGCTAAGGGGAATCGTACGGGACCggca
aaaaccaaaacaaagattgcgaattttttttcgaaatctgacaTATATGA
TTGATGCGCTCCTACAACTTTGAAATCAAATAGCACTGGTCATTCAACAA
GGAAAGAGGCACAGTCAAGTGTAAGCTCTCGATGGCAAGTAAAAAATCTA
ATACCAGtagTTTCTCTGCTAAGTTGATTAATGGAGGCATAGCTGGTTCA
ATTGGTACATGTTGTGTTTTCCCACTTGACTTAGCCAAAACAAGAATTCA
AGATCAAAGAACATTCTCAAAAACAACTGGACAGGCTGCGACAAGACTCT
ATAAAAATGTCTTCCATTGCATGTACATTGTTGGAAAAACTGAGGGAGTC
AGAGGGCTCTACAAAGGGCTTGGTATTAACTTATTCCTTGTAAATCCTGA
GAAGGCAATTAAATTAGCTGTGAATGACCAATGCAGACAACACCTGGGAT
CAAAACAAGGATCTATGTTACCTTTACGGTATGAAGCTATGGCAGGTGGC
TTAGCTGGAATGTGCCAGATTTTTATAACAACACCAATGGAATTCTTAAA
AATACAAATGCAAGTTGCTGGACGAAATGCTGAGTCTGCACAAACAAGTG
CTGTCAAGGTAGCAGTTAATCTTATGCGACAAAGAGGAATTGCTGGTATT
TACAAAGGAACTGGTGCTACATTTATAAGGGATGTACCATTCTCCTGCGT
CTATTTCCCATTATTCTCATACTTAAACTCACTGGGATACAAAGATGGTC
GAAAGCCACATCCTGTTCATTCACTGGCTTCAGGGTTAGGATCTGGCGTA
TTTAGCGCTGTCCTTGTTACTCCTATGGATGTTGTCAAAACGCGATTACA
AGTCTTGAAACGTATGGAAGGAGAACCTATCTATAACGGCTGGTCCGATG
CTGTCAGTAAAATATACAGAAACGAGGGTCTATCTGCATTCTTCAAAGGA
GCTATCACACGTGCCATTGTGGTGGCGCCCTTGTTTGGAATAGCTCAAAT
GGTTTATTTTGTTGGTTTTGCAGAGACTATTATGGAGCGTGCATCTCAAC
AAAGgatcaaagatttttcttgaaatcgaaaaatatttatccccTCGAAA
GAATTCCTAAACGACTCAAATTTCTTTAACTATAGTTCTAAAAACGAGAA
TCTTCTGCCCCACAATCTTCAAAGGATAACtaatttctttttagtttaTG
TTACGTCTCGACAGTTgtcaaattaaaaatgaaatgatCGGTACCTTCAT
GCGAGAGCATTGTTGATTTACAATCCCCTCGAAGAGAAACCCTTagttgt
ttttaatcaattactttttatattttaatatGTCATATACTTTAAGTAGA
TAAAATCGCTCACGACAATGTTAAAAATAATAgagtttttcataaaaata
ttgtTAATATATTATAGAAAATTACAATCTATAAAGGCTTTGTATCATaa
gaattcaaaatatttttactttatcgTTTtacatatacagattttttacG
TAAAGGTTGATTAATggtgtgtttttttcttttttttcttttgtataatt
tttttagtagtgtataatatttatttggcattttattttttaaacacaCC
ATTAGCAACTCTCGGAAATGAtcataattagaaatttctgtAAGGATTAT
AataagttttgacattttctcgtaACGCTTACCAGGAAATCaaggaattt
tcaaaatgagattcAAAAATTATTCTGGTTTTCTACTAGTGAACAATTAT
TGCTCGTTCGTAATGCTTTAAGTGAATAGCATTACTGGTAAGCTTTTGGA
GCTCACACGATTGAAAGCTTTTACTCTGAGAATTCGCCACCCACGCCGAg
agtaaaaatattgaaaagtgaAACAGATTTATTTGGTCAGCTTAACACTG
TCAAGATTCAAAATTGACCCCGTCTGTTTAAATAGATTTTGAGATTCCTT
TCAAAACATACCTCGGATTGCAAAACTATGAAAATTTAGTgttattttga
ttgtttcaatagACGATGGAAATCAACATTTTTTCTANACTATGAaaatt
tagtgttttttttattgtttcaatagACGATGGAAATCAacattttttct
attattttatcACATAttgcaaaatttgttttatactGAATTTGTTTAAT
GAACTATCCCAATTTTTTGGTAcagtatttgatttttttaagcca
Run BLAST on NCBI

transcript from alignment at sc0000012:655472..663390+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001799 ID=TCONS_00001799|Name=TCONS_00001799|organism=Clytia hemisphaerica|type=transcript|length=7919bp|location=Sequence derived from alignment at sc0000012:655472..663390+ (Clytia hemisphaerica)
CTTGTTATCGTTACAGAGTTGTTTGGTGCTCAGGGAGCTGAATTCTTAAA AAGTTTTGGAGCGCATCACAATTTCTTTGAAATCAACGCGTTTTTCATTG GATTAAAAGTACGTATTTTGAGatcatcatttttattttttctgtgtttg gAATATGTCAATATATTCAAACGATTATTTGCTTCCAATATTCCATTTTA AACACTAAACGCACATCGTGTGATAGCATGGACGTTGATTAGAGCGAATA TTTAACTCTTAGagtttattttcaaaagattttttccttaaCTTCCGAAA AGTTCGACCGTCATTATTTACCGGTTTAAAAGTTGCAGAGAGCTATATAA CGTATCGATAATAGACATTGAAAAAACGTAATTGCTCCTTTGAACTTTAT TTGGCGGCCAGGATATCAgataaaaaagactttccagAGTCCAGAGTTTT TTTTGCAAGAAATTGTGCACACGCCTATTCTGGGTGTTGTGGCTCCTTCG TTTATTGTACACCAGTTTGTACACCCATTCACAGCGGTTTACTTGGCAGG TGAACGAAGGAATGTTCGTCCAGGTCATGTGTGAGGTCAAATGGGTAGTC AGTCCTCCAAGGTGCTGATGGTTGCTCATTAAATGTTTAGTTGCGAATAT GggcctaaaaatatttttgggattttttccgCTTAAACTAATTTAGACTA TATAAtacgcgaaaaaaaatttgacgtcaatttcgagataaaagtcaaat ttgaatttgaacgCTTATGCGAAGACCCTCGTTTTCTGATAAGGCAGAAG AACGCTTGGCcatgacttgaaaaggtttgttACGTACATGGAGACACGAG TTTGGCCTAAAAgtctattttattgtttttatcgtTTTTCATGTCCGTTG CTTTTGTCTCCTGCGTACTCAGTACTCATAAAATTTCCGGACCATCATTT AGAAATGTTAAAGGGAATACTGTGATTTACGATGACCGTACATATTAAAC CAATTAACGCTTAGAAGCTGNTAGACATTGAAAAAACGTAATTGCTCCTT TGAACTTTATTTGGCGGCCAGGATATCAgataaaaaagactttccagAGT CCAGAGTTTTTTTTGCAAGAAATTGTGCACACGCCTATTCTGGGTGTTGT GGCTCCTTCGTTTATTGTACACCAGTTTGTACACCCATTCACAGCGGTTT ACTTGGCAGGTGAACGAACGAATGTTCGTCCAGGTCATGTGTGAGGTCAA ATGGGTAGTCAGTCCTCCAAGGTGCTGATGGTTGCTCATTAAATGTGTAG TTGCGAATATGggcctaaaaatatttttgggattttttccgCTTAAACTA ATTTAGACTATATAAtacgcgaaaaaaaatttgacgtcaatttcgagata aaagtcaaatttgaatttgaacgCTTATGCGAAGACCCTCGTTTTCTGAT AAGGCAGAAGAACGCTTGGCcatgacttgaaaaggtttgttACGTACATG GAGACACGAGTTTGGCCTAAAAgtctattttattgtttttatcgtTTTTC ATGTCCGTTGCTTTTGTCTCCTGCGTACTCAGTACTCATAAAATTTCCGG ACCATCATTTAGAAATGTTAAAGGGAATACTGTGATTTACGATGACCGTA CATATTAAACCAATTAACGCTTAGAAGCTGCAAAGTTAGCaattaattaa aaatgaaataaaaagtcCGTGATTTATTATGATATCTcctatttaaattt ttttagttaGCTTTTTATCTTTCTATCAAGTTTGATAACACCGCGTTTTT CTTGTGTTTGTATATGTTGCAGGGGAAGTTTCTCTCTACATCGAGTAGTT CGTGGGTATTTCCCTGTGGTTGGGTGCAACATTGCTTAAAAACCACATGT CATTTActgacaattaaaaaaaaaaggatatAGGAGCAAAGTACACAGTG ACTGTGATTTGATGAGCgattataaaattatcattttgcTCCGTATATTG TGTTGCTTTTATTTCAATGTAACCGTCTCCtctgtcaatcaaaaaacttt cgagAAACAATTAAAATTTCATTATATTGTTGCCATCCTGTAGCGCGGTG ATTTTTGAATCGACAATGTTTGTATTCagactttcactttcgttttgatt cagaattttttttttgtttatatagaCTACCATCTTGAAAGCTAAGGGGA ATCGTACGGGACCggcaaaaaccaaaacaaagattgcgaattttttttcg aaatctgacaTATATGATTGATGCGCTCCTACAACTTTGAAATCAAATAG CACTGGTCATTCAACAAGGAAAGAGGCACAGTCAAGTGTAAGCTCTCGAT GGCAAGTAAAAAATCTAATACCAGGTATAATTTTCCTTAATATTTTTCTT ACCCAACGTTGCTTTACCTTTTGTATGTAATGAgaggatttttttcagaa aactgacaattttgaaaacaagattAACATTTTATGTAACAACATAAACA TCTCTGCCATCCCATCCGAATTTATGTGTATTTTTTATGAATCatatgaa aaagtatttttctgaatgcaatttgatttttcattcaGCTTCCAGCCGTT GTTCTGGTTAATTTGCATATATATATANAGGATATAGGAGCAAAGTACAC AGTGACTGTGATTTGATGAGCgattataaaattatcattttgcTCCGTAT ATTGTGTTGCTTTTATTTCAATGTAACCGTCTCCtctgtcaatcaaaaaa ctttcgagAAACAATTAAAATTTCATTATATTGTTGCCATCCTGTAGCGC GGTGATTTTTGAATCGACAATGTTTGTATTCagactttcactttcgtttt gattcagaattttttttttgtttatatagaCTACCATCTTGAAAGCTAAG GGGAATCGTACGGGACCggcaaaaaccaaaacaaagattgcgaatttttt ttcgaaatctgacaTATATGATTGATGCGCTCCTACAACTTTGAAATCAA ATAGCACTGGTCATTCAACAAGGAAAGAGGCACAGTCAAGTGTAAGCTCT CGATGGCAAGTAAAAAATCTAATACCAGGTATAATTTTCCTTAATATTTT TCTTACCCAACGTTGCTTTACCTTTTGTATGTAATGAgaggatttttttc agaaaactgacaattttgaaaacaagattAACATTTTATGTAACATCATA AACATCTCTGCCATCCCATCCGAATttatgtgtattttttaatgaatcat atgaaaaagtatttttctgaatgCAATTTGGTTTTTCATTCAGCTTCCAG CCGTTGTTCTGGTTAATTTGCATATATATATAATTCTTCGATTATTAAAA TGGGGAGATTAAATGAGATTAAATGCTTATGAACATTGTGAAAACCAGta gtttttgtcaaaaattctagatttttgtcaaaacccttttgaaaatgaaa taaattagtTGAAAAAGAGAATcccacaaaaattaaattacctttgaaaa aaaagtgccTTGTGAAAATTTGTGGCTtcccaagcgatttaaagtacctg aaaatcagaCCTCCAGATTTGGTCTGGTATTACGAGCGGTCTAGTAGCGG TCAAATTTTTAGACCGGTCCTGACTGCTCGTTGGACCGGTCCAGGCCATT CGTTAGACCAGTCCAGGTCGCTAGTTAATGATTTTTAGTAACGATTACAT TAAAAAATTGTTGTAGAAGGATGTCGACCGGGCGATCGGGGCCAGTCTGA GACCGGATGATTGGGGCCGGTCTGAGACCAGACACTTCGCAGCGGCACCT AAATTAACTAGACTcataccgtgagagtgggtaacttgcatcagtggagg ctaacatgcatagccctaaaatgaatgacctggctggtcattaaaataaa ctatattcaGCTCTGCTTGCAGCTCTActctaccatttttgttttgattt aacttgtattttaatgaccagacgggtcatttatttgagggctatgcatg ttagcctcaactgatgcaagttacccactctcacggtacCTTTTAGTAAA TTAAAGATCAGTCCTATATTCAtgtactttaaatcgcttggggagtcaca attATCCATTTGACAGTAATGCAGGgctaaaattttgtgaaatcaCACTA TTTCGCGAAATTAATTcgttttcatttttaacattAATTTATTCTACATT TATCAtctaattttcattaatttttttatatttttagtagTTTCTCTGCT AAGTTGATTAATGGAGGCATAGCTGGTTCAATTGGTACATGTTGTGTTTT CCCACTTGACTTAGCCAAAACAAGAATTCAAGATCAAAGAACATTCTCAA AAACAACTGGACAGGCTGCGACAAGACTCTATAAAAATGTGTAAGTGATT TTTCTCATTGTTTCTTTTCTACGTATGAAAAATTAGTTTTGAGTCATAAA TGCTCCCATTTTCTAGTTTAttctccaaaaataaaaataacggacaaaAA TAATTTCCTTATTTTTAGCTTCCATTGCATGTACATTGTTGGAAAAACTG AGGGAGTCAGAGGGCTCTACAAAGGTATATTTATATTCATATTTATATTT AATCCATTTTGAATTATAAATGTCGTAGACAATGGGGTTACGATAACAGA ACGTTCCCCTCTATCTATGGAAAGAGAACCTGGAAAAActttgtcaaaat tttaaacataactttttttctatcatTTTCAGGGCTTGGTATTAACTTAT TCCTTGTAAATCCTGAGAAGGCAATTAAATTAGCTGTGAATGACCAATGC AGACAACACCTGGGATCAAAACAAGGGTaagaaaaatgactttttctatA CTTTCATTTGAAAGTCTTATTTCCATCAGAATGAAACATAAatttcatca gattttaaaacagttttcattatatttgattTTTGTAGATCTATGTTACC TTTACGGTATGAAGCTATGGCAGGTGGCTTAGCTGGAATGTGCCAGGTAA TAATTCTAAAAACTAaatactttctttaaaaaaataaacacttaatttat tttttattttttaacaaatttcttTGTCCTTCTTTTGCTCttacaatgtt tttttttaattttcttatagATTTTTATAACAACACCAATGGAATTCTTA AAAATACAAATGCAAGTTGCTGGACGAAGtaaggaaaaattatttttaat gggTGCTACCAGGATTTGTAGCTGttctttgaattttgatttcctTCACA ATATCTACTCTAAAAAGTCGATCAGCATGGGTGAGAGATTGCATTAAGGA AAAATTATGAATGAGATCCTGACGACTAGAATGCATGGGATtataaattg ttaaaaaaagtagtcttttacatttttaaataaatttataaggAGGCACA TTGACAGATCTCATGATGGTCAGTACTCTATTAATAATGCAGTAGCATCa gtgttgttttgatttagaAATTCTCACCCACCTTATCAATTAttgatttt ttcttaatttattttctcaatacattttttaagaatttatctttttctta aaacaatAGATGCTGAGTCTGCACAAACAAGTGCTGTCAAGGTAGCAGTT AATCTTATGCGACAAAGAGGAATTGCTGGTATTTACAAAGGAACTGGTGC TACATTTATAAGGTTGCTTGTTATTCCTTTGACATTAtgactttttcata atttttagatcgcagctttccgaaaaaaaatgtgCATTTTGAGGAACAGC TAAAGATGAGCTCCCCTTTAATTGATTGAAATCATTATGCCATAAACATC CTTTGTCTTGAACCATTACCCGATTACATAGAGATTGCAACTCTGCAATT ACACTTCCTTTTAATTCTTAAATAGACGTCATTTACAGACGATTACATTG TAACAATTTGAAATGTTTCTGAAATCATTCAAAGGctattacaatataat tttgataTCTTTCAATTTGTAATACTCTTGTTATAGAGGTGCGCAACTGA AATACCTTTAAAATCATTCGAAAAATTATTCCCAtcttttttgacgaatt ttttatttcatttctttataGGGATGTACCATTCTCCTGCGTCTATTTCC CATTATTCTCATACTTAAACTCACTGGTGAGTAAAAAGTTGTACTTtgac tttgtttttgtttatcttggAACACAATACAATCAAGTCTTGTTCTACAG GAATCCTAAACTCATTCAAAACCGGTTTTTGAATGCAAAGAATACAGAGT GCAGAGCACCTAAGTTAGCTGTCATGTTGTTGTGTACATAACTTTGAGAT TTATTCCTTCCTGTCTCGTAACTTccttatttgtttttttcatgtAACTT TTTGCTCATGTGGTTTAAGAGTCGCTTACAATCACAGTCATAAATATCAA CACTTAGAAACCTAAACTTTGTACCTAGCTAAGAGATATTACTCTACTTT TTTTTCAGGGATACAAAGATGGTCGAAAGCCACATCCTGTTCATTCACTG GCTTCAGGGTTAGGATCTGGCGTATTTAGCGCTGTCCTTGTTACTCCTAT GGATGTTGTCAAAACGCGATTACAAGTCTTGAAACGTATGGAAGGAGAAC CTATCTATAACGGCTGGTCCGATGCTGTCAGTAAAATATACAGAAACGAG GGTCTATCTGCATTCTTCAAAGGAGCTATCACACGTGCCATTGTGGTGGC GCCCTTGTTTGGAATAGCTCAAATGGTTTATTTTGTTGGTTTTGCAGAGA CTATTATGGAGCGTGCATCTCAACAAAGgatcaaagatttttcttgaaat cgaaaaatatttatccccTCGAAAGAATTCCTAAACGACTCAAATTTCTT TAACTATAGTTCTAAAAACGAGAATCTTCTGCCCCACAATCTTCAAAGGA TAACtaatttctttttagtttaTGTTACGTCTCGACAGTTgtcaaattaa aaatgaaatgatCGGTACCTTCATGCGAGAGCATTGTTGATTTACAATCC CCTCGAAGAGAAACCCTTagttgtttttaatcaattactttttatatttt aatatGTCATATACTTTAAGTAGATAAAATCGCTCACGACAATGTTAAAA ATAATAgagtttttcataaaaatattgtTAATATATTATAGAAAATTACA ATCTATAAAGGCTTTGTATCATaagaattcaaaatatttttactttatcg TTTtacatatacagattttttacGTAAAGGTTGATTAATggtgtgttttt ttcttttttttcttttgtataatttttttagtagtgtataatatttattt ggcattttattttttaaacacaCCATTAGCAACTCTCGGAAATGAtcata attagaaatttctgtAAGGATTATAataagttttgacattttctcgtaAC GCTTACCAGGAAATCaaggaattttcaaaatgagattcAAAAATTATTCT GGTTTTCTACTAGTGAACAATTATTGCTCGTTCGTAATGCTTTAAGTGAA TAGCATTACTGGTAAGCTTTTGGAGCTCACACGATTGAAAGCTTTTACTC TGAGAATTCGCCACCCACGCCGAgagtaaaaatattgaaaagtgaAACAG ATTTATTTGGTCAGCTTAACACTGTCAAGATTCAAAATTGACCCCGTCTG TTTAAATAGATTTTGAGATTCCTTTCAAAACATACCTCGGATTGCAAAAC TATGAAAATTTAGTgttattttgattgtttcaatagACGATGGAAATCAA CATTTTTTCTANACTATGAaaatttagtgttttttttattgtttcaatag ACGATGGAAATCAacattttttctattattttatcACATAttgcaaaatt tgttttatactGAATTTGTTTAATGAACTATCCCAATTTTTTGGTAcagt atttgatttttttaagcca
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000965XLOC_000965Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001799-exon-sc0000012-1491911889:655472..655579TCONS_00001799-exon-sc0000012-1491911889:655472..655579Clytia hemisphaericaexon
TCONS_00001799-exon-sc0000012-1510915933:655472..655579TCONS_00001799-exon-sc0000012-1510915933:655472..655579Clytia hemisphaericaexon
TCONS_00001799-exon-sc0000012-1575043694:655472..655579TCONS_00001799-exon-sc0000012-1575043694:655472..655579Clytia hemisphaericaexon
TCONS_00001799-exon-sc0000012-1491911889:657647..657845TCONS_00001799-exon-sc0000012-1491911889:657647..657845Clytia hemisphaericaexon
TCONS_00001799-exon-sc0000012-1510915933:657647..657845TCONS_00001799-exon-sc0000012-1510915933:657647..657845Clytia hemisphaericaexon
TCONS_00001799-exon-sc0000012-1575043694:657647..657845TCONS_00001799-exon-sc0000012-1575043694:657647..657845Clytia hemisphaericaexon
TCONS_00001799-exon-sc0000012-1491911889:659709..659861TCONS_00001799-exon-sc0000012-1491911889:659709..659861Clytia hemisphaericaexon
TCONS_00001799-exon-sc0000012-1510915933:659709..659861TCONS_00001799-exon-sc0000012-1510915933:659709..659861Clytia hemisphaericaexon
TCONS_00001799-exon-sc0000012-1575043694:659709..659861TCONS_00001799-exon-sc0000012-1575043694:659709..659861Clytia hemisphaericaexon
TCONS_00001799-exon-sc0000012-1491911889:659990..660045TCONS_00001799-exon-sc0000012-1491911889:659990..660045Clytia hemisphaericaexon
TCONS_00001799-exon-sc0000012-1510915933:659990..660045TCONS_00001799-exon-sc0000012-1510915933:659990..660045Clytia hemisphaericaexon
TCONS_00001799-exon-sc0000012-1575043694:659990..660045TCONS_00001799-exon-sc0000012-1575043694:659990..660045Clytia hemisphaericaexon
TCONS_00001799-exon-sc0000012-1491911889:660204..660297TCONS_00001799-exon-sc0000012-1491911889:660204..660297Clytia hemisphaericaexon
TCONS_00001799-exon-sc0000012-1510915933:660204..660297TCONS_00001799-exon-sc0000012-1510915933:660204..660297Clytia hemisphaericaexon
TCONS_00001799-exon-sc0000012-1575043694:660204..660297TCONS_00001799-exon-sc0000012-1575043694:660204..660297Clytia hemisphaericaexon
TCONS_00001799-exon-sc0000012-1491911889:660410..660467TCONS_00001799-exon-sc0000012-1491911889:660410..660467Clytia hemisphaericaexon
TCONS_00001799-exon-sc0000012-1510915933:660410..660467TCONS_00001799-exon-sc0000012-1510915933:660410..660467Clytia hemisphaericaexon
TCONS_00001799-exon-sc0000012-1575043694:660410..660467TCONS_00001799-exon-sc0000012-1575043694:660410..660467Clytia hemisphaericaexon
TCONS_00001799-exon-sc0000012-1491911889:660592..660649TCONS_00001799-exon-sc0000012-1491911889:660592..660649Clytia hemisphaericaexon
TCONS_00001799-exon-sc0000012-1510915933:660592..660649TCONS_00001799-exon-sc0000012-1510915933:660592..660649Clytia hemisphaericaexon
TCONS_00001799-exon-sc0000012-1575043694:660592..660649TCONS_00001799-exon-sc0000012-1575043694:660592..660649Clytia hemisphaericaexon
TCONS_00001799-exon-sc0000012-1491911889:661031..661133TCONS_00001799-exon-sc0000012-1491911889:661031..661133Clytia hemisphaericaexon
TCONS_00001799-exon-sc0000012-1510915933:661031..661133TCONS_00001799-exon-sc0000012-1510915933:661031..661133Clytia hemisphaericaexon
TCONS_00001799-exon-sc0000012-1575043694:661031..661133TCONS_00001799-exon-sc0000012-1575043694:661031..661133Clytia hemisphaericaexon
TCONS_00001799-exon-sc0000012-1491911889:661543..661597TCONS_00001799-exon-sc0000012-1491911889:661543..661597Clytia hemisphaericaexon
TCONS_00001799-exon-sc0000012-1510915933:661543..661597TCONS_00001799-exon-sc0000012-1510915933:661543..661597Clytia hemisphaericaexon
TCONS_00001799-exon-sc0000012-1575043694:661543..661597TCONS_00001799-exon-sc0000012-1575043694:661543..661597Clytia hemisphaericaexon
TCONS_00001799-exon-sc0000012-1491911889:661930..663390TCONS_00001799-exon-sc0000012-1491911889:661930..663390Clytia hemisphaericaexon
TCONS_00001799-exon-sc0000012-1510915933:661930..663390TCONS_00001799-exon-sc0000012-1510915933:661930..663390Clytia hemisphaericaexon
TCONS_00001799-exon-sc0000012-1575043694:661930..663390TCONS_00001799-exon-sc0000012-1575043694:661930..663390Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000012supercontigsc0000012:655472..663390 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0.00191229 1.06764 0.000234861 2.54043e-07 3.05248 3.76777 1.61839 3.26729 1.05884 1.50311 3.67848 0.98718 0.41451 0.312605 0 0.18028 0 0 0.424612 0.192517 0.122448 0 0.77346 0.237066 0 0.411802
Blast
BLAST of TCONS_00001799 vs. Swiss-Prot (Human)
Match: GHC2 (Mitochondrial glutamate carrier 2 OS=Homo sapiens GN=SLC25A18 PE=1 SV=1)

HSP 1 Score: 274.633 bits (701), Expect = 1.664e-84
Identity = 150/316 (47.47%), Postives = 200/316 (63.29%), Query Frame = 3
Query:  309 SFSAKLINGGIAGSIGTCCVFPLDLAKTRIQDQRTFSKTTGQAATRLYKNVFHCMYIVGKTEGVRGLYKGLGINLFLVNPEKAIKLAVNDQCRQHLGSKQGSMLPLRYEAMAGGLAGMCQIFITTPMEFLKIQMQVAGRNAESAQ----------------------TSAVKVAVNLMRQRGIAGIYKGTGATFIRDVPFSCVYFPLFSYLNSLGYKD-GRKPHPVHSLASGLGSGVFSAVLVTPMDVVKTRLQVLKRMEGEPIYNGWSDAVSKIYRNEGLSAFFKGAITRAIVVAPLFGIAQMVYFVGFAETIME 1187
            S +AKLINGG+AG +G  CVFP+DLAKTR+Q+Q       G+A   +YK +  C+    + EG  G+Y+G  +NL LV PEKAIKLA ND  R+ L  + G    L+ E +AG  AGMCQ+ +T PME LKIQ+Q AGR A   Q                       SA  +A  L+R +G+AG+Y+G GAT +RD+PFS +YFPLF+ LN+LG+ +   K    HS  SG  +G  +AV VTP+DV+KTR+Q LK+  GE +Y+G +D   K++  EG SAF KGA  RA+V+APLFGIAQ VYF+G  E I++
Sbjct:    7 SITAKLINGGVAGLVGVTCVFPIDLAKTRLQNQH------GKA---MYKGMIDCLMKTARAEGFFGMYRGAAVNLTLVTPEKAIKLAANDFFRRLL-MEDGMQRNLKMEMLAGCGAGMCQVVVTCPMEMLKIQLQDAGRLAVHHQGSASAPSTSRSYTTGSASTHRRPSATLIAWELLRTQGLAGLYRGLGATLLRDIPFSIIYFPLFANLNNLGFNELAGKASFAHSFVSGCVAGSIAAVAVTPLDVLKTRIQTLKKGLGEDMYSGITDCARKLWIQEGPSAFMKGAGCRALVIAPLFGIAQGVYFIGIGERILK 312          
The following BLAST results are available for this feature:
BLAST of TCONS_00001799 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GHC21.664e-8447.47Mitochondrial glutamate carrier 2 OS=Homo sapiens ... [more]
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