TCONS_00001646 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001646
Unique NameTCONS_00001646
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2080

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001646 ID=TCONS_00001646|Name=TCONS_00001646|organism=Clytia hemisphaerica|type=transcript|length=2080bp
ACTTTACCCAGttcgcttgtttttatttttcttgattgGTGAATTCCTCT
CAAAGATGATGTTTTCTATAGAACCTTGACATATCaatacttcttaaaag
agaATACAGGGAATGCCTAGcgataaaacatttaaaacattcTTATGTTG
TAAACATCATTCCATGTATAACAAAATGATATTTGTGTGTCGATGAAGAT
TATGtgtttttctgatattttctaatatttttttcgagaatttttaaaac
ttttccaGAGGAGGTATGCTGGGTGCTGCTACGCGTGGGAAGCCAAGAAA
ACCGCCTTCATCCGCCCTTCTCACTGCTTTAAAGAAAATCTCACAAGTTC
AAAAAATCCGTAAGAAACCAAAAGTTGAGGAAATAGAAGATAACACTCCG
ATAGTCAACCTTAAAGATAAAACTGATGAGGATACATCTAATACACGAAA
TGATGATTTGAAGACACCACCAGCTCTGGTGACGGGGGATGCATCCACCA
AAGAGGAACATCAAAAAGACAAATCAGACGACCAAAACGCCCTATTTCGA
GCACCCGGTGGACCTTATTATAAATACAGCCCTGATAATAAAATGAGACT
TAACGAGCTGATGAGACAAAATGATTTAACTTGGGGACAGATCGAAGaAC
TATTCACATGCTTTCAAGAATTTGACATTTTCGGTCGTGGGGTCATTGAT
GCATTTTCAATCAAACATGTATCGAGTTTTACTGGACGTGAAATTTCCGA
AGACGAAGCCCAAGAAATCATTGCAACTATGGTCGAGCCTCAAGATGAAA
ATAATTCCACCAATGTACCTATTGGAAACCCAACTACAAAGCCAGTCGGT
GTGTTAGATTTCATTGATTTCGTTCGTGCAATGTCGGGCGTTACCAAGGA
ACCACTGGATGAATGGGATTTGAAACAAGTGTTCAAAGTATTTGATGTGG
ATGATGATTCGTTTATTTCACCACCAGAAATGCATCGAGCTTTCTTAACG
CTTGGTATCGATTTGACTCGATTGGAAATTAATGATATTTTTCGAGAATT
TGATCAAGATGATGATGGCCTGATTTCTTTTGAAGAATTTGAATTCCTCA
TTGAAGGAGCGCACAATCAAATCACAAGAGAAGAACgtaagaaaattgaa
gaatttgaaCGTGAACAACTGCAAAGAGAAGAAGAAGTAAGAAAAaggga
agaagaagaagaacaagCTATTCAAATGAGAATTTCTCAAAGTGCTGATG
ctgatccagaaatgaccagtGTCTTTGGTGGGCAAATGTGACtgataaac
gttttttttataagaacatccaaaaattttgaagccttaaaatgttctta
acgtgttcttgCTTTCACcattttgcccatttttctaagaaaccggtttt
tttagagtcggcaaagccttaaaaagttcttaaattgtccttaacatttc
ggccatcgttcttaaaaagattttttttaaacgtGTAAAACGAAAACTCG
CATctccgtgtatcccaggctttatcaACGCTACTGACGGACGCCAGAGA
AGACAGGTTATCAATAAGCATGAAAGAGCCGATACTGTAATACGCAAGGA
ATTGGTTgaaatgttaaaatattataCAACGTACAATTATTTTTAACCAT
GAGTATATAATTTAATGGCATAAAAAATAACGTTATATTTGAAACATTTT
ATTACAACTTGATGTAGTAGCTCTTGATCCACGGGGGAGGGTACTTTTGg
taaaaattgggtacggggacgtgccgctggttaGGGTCCCTTTTTatgct
ctgaagatatctgacagggtcgactttgggttattttggatatttttcaG
GTCGGTAATTATaaagttttccaatttttcgtctacttttagtcattttt
aacACTTTTCAGGATGAAgatggggaaaattttcaattttttcgttcTGA
AacggtcccaaatttaccaaactgCCAGCGGCACATCCCTGTTGGTCGTC
AAAGTCAGTGCCCCCAGATTCTTGACAATCTTGGAAGTTTGGCGTATTct
tttgttcttaaaatgttcttgatttCACCA
Run BLAST on NCBI

protein sequence of TCONS_00001646-protein

>TCONS_00001646-protein ID=TCONS_00001646-protein|Name=TCONS_00001646-protein|organism=Clytia hemisphaerica|type=polypeptide|length=341bp
MLGAATRGKPRKPPSSALLTALKKISQVQKIRKKPKVEEIEDNTPIVNLK
DKTDEDTSNTRNDDLKTPPALVTGDASTKEEHQKDKSDDQNALFRAPGGP
YYKYSPDNKMRLNELMRQNDLTWGQIEELFTCFQEFDIFGRGVIDAFSIK
HVSSFTGREISEDEAQEIIATMVEPQDENNSTNVPIGNPTTKPVGVLDFI
DFVRAMSGVTKEPLDEWDLKQVFKVFDVDDDSFISPPEMHRAFLTLGIDL
TRLEINDIFREFDQDDDGLISFEEFEFLIEGAHNQITREERKKIEEFERE
QLQREEEVRKREEEEEQAIQMRISQSADADPEMTSVFGGQM
Run BLAST on NCBI

transcript from alignment at sc0000011:205190..209719-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001646 ID=TCONS_00001646|Name=TCONS_00001646|organism=Clytia hemisphaerica|type=transcript|length=4530bp|location=Sequence derived from alignment at sc0000011:205190..209719- (Clytia hemisphaerica)
ACTTTACCCAGTTCGCTTGTTTTTATTTTTCTTGATTGGTGAATTCCTCT
CAAAGATGATGTTTTCTATAGAACCTTGACATATCAATACTTCTTAAAAG
AGAATACAGGGAATGCCTAGCGATAAAACATTTAAAACATTCTTATGTTG
TAAACATCATTCCATGTATAACAAAATGATATTTGTGTGTCGATGAAGAT
TATGTGTTTTTCTGATATTTTCTAATATTTTTTTCGAGAATTTTTAAAAC
TTTTCCAGAGGAGGTATGCTGGGTGCTGCTACGCGTGGGAAGCCAAGAAA
ACCGCCTTCATCCGCCCTTCTCACTGCTTTAAAGAAAATCTCACAAGTTC
AAAAAATCCGTAAGAAACCAAAAGTTGAGGAAATAGAAGATAACACTCCG
ATAGTCAACCTTAAAGATAAAACTGATGAGGATACATCTAATACACGAAA
TGATGATTTGAAGACACCACCAGCTCTGGTGACGGGGGATGCATCCACCA
AAGAGGAACATCAAAAAGACAAATCAGACGACCAAAACGCCCTATTTCGA
GCACCCGGTGGACCTTATTATAAATACAGCCCTGATAATAAAATGAGACT
TAACGAGGTTAGATTTTTTCATTTATGCCAAAATAACTTCTTTCTTGTGA
ATTCCCATCGATAAATCGTCGTTAACATGATTGACTTAAAGTTTAATCTA
AAAATCAGTACCTTACAAAATCAATAGTTATACACATTTTTTTTATAAGC
AACCCCAATTTTCGACTCAGGGCCGAAGTTGCAATTTCTCTTCGTAACCT
ATCTCTTAAATTTTCTTATAAATCTACTACTTTTAAATTAGCTGATGAGA
CAAANGCTATACAGGAGATACATGAATAAAGGAGGAAAAAAAGATCCATT
TTTCTTTTATTGATATGCAATAATACAAAACACGCATAATATCTCTGCAA
CGACATGCTTTGATCTTCTACCCTGTATAATATCCCCGTAATCCGAATAA
TTTAACTCGGAGTAAAGTTAATGCAATTTAANTCGAAAATACACAACAAT
TTTACTTCATAAATAGACTTGCAATTTTCCTTCAAAAATACATAACAATT
TTACTTCATAAATAGACTGCAATTTTCCTTCAAAAATACAGAATAATTTT
ACAAATAAGGAGCAGTTGAAAGATACATAGCAGATACTTTATAAAAACCC
TACAATTCTCCTTCAAAAACAAAATACACAACACAATTGTTGTAAATTAG
AANTATAAATACAGCCCTGATAATAAAATGAGACTTAACGAGGTTAGATT
TTTTCATTTATGCCAAAATAACTTCTTTCTTGTGAATTCCCATCGATAAA
TCGTCGTTAACATGATTGACTTAAAGTTTAATCTAAAAATCAGTACCTTA
CAAAATCAATAGTTATACACATTTTTTTTATAAGCAACCCCAATTTTCGA
CTCAGGGCCGAAGTTGCAATTTCTCTTCGTAACCTATCTCTTAAATTTTC
TTATAAATCTACTACTTTTAAATTAGCTGATGAGACAAAATGATTTAACT
TGGGGACAGATCGAAGGTGAGAATTTTTTAATTAATTTTCATATGATTTT
CCTTCGAAAATACACAACAATTTTACTTCATAAATAGACTTGCAATTTTC
CTTCAAAAATACATAACAATTTTACTTCATAAATAGACTGCAATTTTCCT
TCAAAAATACAGAATAATTTTACAAATAAGGAGCAGTTGAAAGATACATA
GCAGATACTTTATAAAAACCCTACAATTCTCCTTCAAAAACAAAATACAC
AACACAATTGCTGTAAATTAGATAGATTGTGTATTTCTTTTCTTCTTTAG
AACTATTCACATGCTTTCAAGAATTTGACATTTTCGGTCGTGGGGTCATT
GATGCATTTTCAATCAAACATGTATCGAGTTTTACTGGACGTGAAATTTC
CGAAGACGAAGCCCAAGAAATCATTGCAACTATGGTCGAGCCTCAAGGTA
GACCCAGCTGGCACACAACCTTGTTTCAACATTCATATAACGTTATATGG
ACGTTGTGAACGTTAGATAAACGTTTAAATATCGTTGTGTGCCAACTGGG
AGAGCAAGATTACAATCTAACCCTGTCTGAATTGCCCGATTAGAACCTTT
CAACCAATATAGGGGTGGAATGAAGGAGCTAAAGTCCATTCGCTTTAAGT
ATACACTAATTCTTGTTTTGCATGCTATCTTTCAATCAATGATTCAATCC
TATCGAATCATATACCGCTGAACAACAAAATAGTGTACACTTAAAGCGAA
TGGATTTTATTAGACTGTTTTGATGGGCTTGTATTTGCCCTTTGTAAAGA
ACTCCAAAATCCAGTGGATATTCTAGAAATTAATGGGTGGGAATGATATT
TCAGTGTATCTTGCTCTTTGGCTTAAGTTTTGGGGTAATGGCTTTGGCAA
GAGACTGAATGGAGCATACGTAGACTTTCTAATGAATCGCTTAAGAATAG
AATCTACATCTCTGAAGAGGATAGCTATACAGGAGATACATGAATAAAGG
AGGAAAAAAAGATCCATTTTTCTTTTATTGATATGCAATAATACAAAACA
CGCATAATATCTCTGCAACGACATGCTTTGATCTTCTACCCTGTATAATC
TTCATTCTCTAATTCGAGTTTAAGACTCCCCGTAATCCGAATAATTTAAC
TCGGAGTAAAGTTAATGCAATTTACATTACTGTCTAGATGAAAATAATTC
CACCAATGTACCTATTGGAAACCCAACTACAAAGCCAGTCGGTGTGTTAG
ATTTCATTGATTTCGTTCGTGCAATGTCGGGCGTTACCAAGGAACCACTG
GATGAATGGGATTTGAAACAAGTGTTCAAAGTATTTGATGTGGATGATGA
TTCGTTTATTTCACCACCAGAAATGCATCGAGCTTTCTTAACGCTTGGTA
TCGATTTGACTCGATTGGAAATTAATGATATTTTTCGAGAATTTGATCAA
GATGATGATGGCCTGATTTCTTTTGAAGGTACGTGTGGACTAAAGAACAA
ACATTTTTTTTCGAAGTCTAAGATATTGCTAAAATGATTTTAGTGGCTAT
ATTTTAGGTTTTATTTTAGGTGTACAGTGCCTTGTTTGCGATAATTACAT
TTTTAATAGTAGTTGGCATACAATTCACGACTTAAGATGATCAAAAGCCT
TTCTGAGAAATAACAATCCTGTCTCAGTTTTAGAGATTTTGAGAAATAGC
CAATCTCCCCAGGCTAGGTATTATCATAGACTAGGAAGTAAAACGTGTGC
TTGCCCATCTACATACACGATTTTATGTGTAAAGTCCCTCTTAAATGTGC
AGTCTGGCACGTGTACTTTCCACCTCATACGTCATAGTCCATCGGTTCAC
AATAAGCCTCGTTGAGTCTCATTGGATTGAATATTGGATGGTTAGAGGTT
AACACGATTTTTGCAATAATTTTGTAGTTAATGATCAATTATTCTGATTA
TGTTTATCAACTATGATTAACTTTCCCATTCATAGAATTTGAATTCCTCA
TTGAAGGAGCGCACAATCAAATCACAAGAGAAGAACGTAAGAAAATTGAA
GAATTTGAACGTGAACAACTGCAAAGAGAAGAAGAAGTAAGAAAAAGGGA
AGAAGAAGAAGAACAAGCTATTCAAATGAGAATTTCTCAAAGTGCTGATG
CTGATCCAGAAATGACCAGTGTCTTTGGTGGGCAAATGTGACTGATAAAC
GTTTTTTTTATAAGAACATCCAAAAATTTTGAAGCCTTAAAATGTTCTTA
ACGTGTTCTTGCTTTCACCATTTTGCCCATTTTTCTAAGAAACCGGTTTT
TTTAGAGTCGGCAAAGCCTTAAAAAGTTCTTAAATTGTCCTTAACATTTC
GGCCATCGTTCTTAAAAAGATTTTTTTTAAACGTGTAAAACGAAAACTCG
CATCTCCGTGTATCCCAGGCTTTATCAACGCTACTGACGGACGCCAGAGA
AGACAGGTTATCAATAAGCATGAAAGAGCCGATACTGTAATACGCAAGGA
ATTGGTTGAAATGTTAAAATATTATACAACGTACAATTATTTTTAACCAT
GAGTATATAATTTAATGGCATAAAAAATAACGTTATATTTGAAACATTTT
ATTACAACTTGATGTAGTAGCTCTTGATCCACGGGGGAGGGTACTTTTGG
TAAAAATTGGGTACGGGGACGTGCCGCTGGTTAGGGTCCCTTTTTATGCT
CTGAAGATATCTGACAGGGTCGACTTTGGGTTATTTTGGATATTTTTCAG
GTCGGTAATTATAAAGTTTTCCAATTTTTCGTCTACTTTTAGTCATTTTT
AACACTTTTCAGGATGAAGATGGGGAAAATTTTCAATTTTTTCGTTCTGA
AACGGTCCCAAATTTACCAAACTGCCAGCGGCACATCCCTGTTGGTCGTC
AAAGTCAGTGCCCCCAGATTCTTGACAATCTTGGAAGTTTGGCGTATTCT
TTTGTTCTTAAAATGTTCTTGATTTCACCA

Coding sequence (CDS) from alignment at sc0000011:205190..209719-

>TCONS_00001646 ID=TCONS_00001646|Name=TCONS_00001646|organism=Clytia hemisphaerica|type=CDS|length=5130bp|location=Sequence derived from alignment at sc0000011:205190..209719- (Clytia hemisphaerica)
AATTTGAATTCCTCATTGAAGGAGCGCACAATCAAATCACAAGAGAAGAA
CGTAAGAAAATTGAAGAATTTGAACGTGAACAACTGCAAAGAGAAGAAGA
AGTAAGAAAAAGGGAAGAAGAAGAAGAACAAGCTATTCAAATGAGAATTT
CTCAAAGTGCTGATGCTGATCCAGAAATGACCAGTGTCTTTGGTGGGCAA
ATGTGAATGAAAATAATTCCACCAATGTACCTATTGGAAACCCAACTACA
AAGCCAGTCGGTGTGTTAGATTTCATTGATTTCGTTCGTGCAATGTCGGG
CGTTACCAAGGAACCACTGGATGAATGGGATTTGAAACAAGTGTTCAAAG
TATTTGATGTGGATGATGATTCGTTTATTTCACCACCAGAAATGCATCGA
GCTTTCTTAACGCTTGGTATCGATTTGACTCGATTGGAAATTAATGATAT
TTTTCGAGAATTTGATCAAGATGATGATGGCCTGATTTCTTTTGAAGAAC
TATTCACATGCTTTCAAGAATTTGACATTTTCGGTCGTGGGGTCATTGAT
GCATTTTCAATCAAACATGTATCGAGTTTTACTGGACGTGAAATTTCCGA
AGACGAAGCCCAAGAAATCATTGCAACTATGGTCGAGCCTCAAGCTGATG
AGACAAAATGATTTAACTTGGGGACAGATCGAAGATGCTGGGTGCTGCTA
CGCGTGGGAAGCCAAGAAAACCGCCTTCATCCGCCCTTCTCACTGCTTTA
AAGAAAATCTCACAAGTTCAAAAAATCCGTAAGAAACCAAAAGTTGAGGA
AATAGAAGATAACACTCCGATAGTCAACCTTAAAGATAAAACTGATGAGG
ATACATCTAATACACGAAATGATGATTTGAAGACACCACCAGCTCTGGTG
ACGGGGGATGCATCCACCAAAGAGGAACATCAAAAAGACAAATCAGACGA
CCAAAACGCCCTATTTCGAGCACCCGGTGGACCTTATTATAAATACAGCC
CTGATAATAAAATGAGACTTAACGAGAATTTGAATTCCTCATTGAAGGAG
CGCACAATCAAATCACAAGAGAAGAACGTAAGAAAATTGAAGAATTTGAA
CGTGAACAACTGCAAAGAGAAGAAGAAGTAAGAAAAAGGGAAGAAGAAGA
AGAACAAGCTATTCAAATGAGAATTTCTCAAAGTGCTGATGCTGATCCAG
AAATGACCAGTGTCTTTGGTGGGCAAATGTGAATGAAAATAATTCCACCA
ATGTACCTATTGGAAACCCAACTACAAAGCCAGTCGGTGTGTTAGATTTC
ATTGATTTCGTTCGTGCAATGTCGGGCGTTACCAAGGAACCACTGGATGA
ATGGGATTTGAAACAAGTGTTCAAAGTATTTGATGTGGATGATGATTCGT
TTATTTCACCACCAGAAATGCATCGAGCTTTCTTAACGCTTGGTATCGAT
TTGACTCGATTGGAAATTAATGATATTTTTCGAGAATTTGATCAAGATGA
TGATGGCCTGATTTCTTTTGAAGAACTATTCACATGCTTTCAAGAATTTG
ACATTTTCGGTCGTGGGGTCATTGATGCATTTTCAATCAAACATGTATCG
AGTTTTACTGGACGTGAAATTTCCGAAGACGAAGCCCAAGAAATCATTGC
AACTATGGTCGAGCCTCAAGCTGATGAGACAAAATGATTTAACTTGGGGA
CAGATCGAAGATGCTGGGTGCTGCTACGCGTGGGAAGCCAAGAAAACCGC
CTTCATCCGCCCTTCTCACTGCTTTAAAGAAAATCTCACAAGTTCAAAAA
ATCCGTAAGAAACCAAAAGTTGAGGAAATAGAAGATAACACTCCGATAGT
CAACCTTAAAGATAAAACTGATGAGGATACATCTAATACACGAAATGATG
ATTTGAAGACACCACCAGCTCTGGTGACGGGGGATGCATCCACCAAAGAG
GAACATCAAAAAGACAAATCAGACGACCAAAACGCCCTATTTCGAGCACC
CGGTGGACCTTATTATAAATACAGCCCTGATAATAAAATGAGACTTAACG
AGAATTTGAATTCCTCATTGAAGGAGCGCACAATCAAATCACAAGAGAAG
AACGTAAGAAAATTGAAGAATTTGAACGTGAACAACTGCAAAGAGAAGAA
GAAGTAAGAAAAAGGGAAGAAGAAGAAGAACAAGCTATTCAAATGAGAAT
TTCTCAAAGTGCTGATGCTGATCCAGAAATGACCAGTGTCTTTGGTGGGC
AAATGTGAATGAAAATAATTCCACCAATGTACCTATTGGAAACCCAACTA
CAAAGCCAGTCGGTGTGTTAGATTTCATTGATTTCGTTCGTGCAATGTCG
GGCGTTACCAAGGAACCACTGGATGAATGGGATTTGAAACAAGTGTTCAA
AGTATTTGATGTGGATGATGATTCGTTTATTTCACCACCAGAAATGCATC
GAGCTTTCTTAACGCTTGGTATCGATTTGACTCGATTGGAAATTAATGAT
ATTTTTCGAGAATTTGATCAAGATGATGATGGCCTGATTTCTTTTGAAGA
ACTATTCACATGCTTTCAAGAATTTGACATTTTCGGTCGTGGGGTCATTG
ATGCATTTTCAATCAAACATGTATCGAGTTTTACTGGACGTGAAATTTCC
GAAGACGAAGCCCAAGAAATCATTGCAACTATGGTCGAGCCTCAAGCTGA
TGAGACAAAATGATTTAACTTGGGGACAGATCGAAGATGCTGGGTGCTGC
TACGCGTGGGAAGCCAAGAAAACCGCCTTCATCCGCCCTTCTCACTGCTT
TAAAGAAAATCTCACAAGTTCAAAAAATCCGTAAGAAACCAAAAGTTGAG
GAAATAGAAGATAACACTCCGATAGTCAACCTTAAAGATAAAACTGATGA
GGATACATCTAATACACGAAATGATGATTTGAAGACACCACCAGCTCTGG
TGACGGGGGATGCATCCACCAAAGAGGAACATCAAAAAGACAAATCAGAC
GACCAAAACGCCCTATTTCGAGCACCCGGTGGACCTTATTATAAATACAG
CCCTGATAATAAAATGAGACTTAACGAGAATTTGAATTCCTCATTGAAGG
AGCGCACAATCAAATCACAAGAGAAGAACGTAAGAAAATTGAAGAATTTG
AACGTGAACAACTGCAAAGAGAAGAAGAAGTAAGAAAAAGGGAAGAAGAA
GAAGAACAAGCTATTCAAATGAGAATTTCTCAAAGTGCTGATGCTGATCC
AGAAATGACCAGTGTCTTTGGTGGGCAAATGTGAATGAAAATAATTCCAC
CAATGTACCTATTGGAAACCCAACTACAAAGCCAGTCGGTGTGTTAGATT
TCATTGATTTCGTTCGTGCAATGTCGGGCGTTACCAAGGAACCACTGGAT
GAATGGGATTTGAAACAAGTGTTCAAAGTATTTGATGTGGATGATGATTC
GTTTATTTCACCACCAGAAATGCATCGAGCTTTCTTAACGCTTGGTATCG
ATTTGACTCGATTGGAAATTAATGATATTTTTCGAGAATTTGATCAAGAT
GATGATGGCCTGATTTCTTTTGAAGAACTATTCACATGCTTTCAAGAATT
TGACATTTTCGGTCGTGGGGTCATTGATGCATTTTCAATCAAACATGTAT
CGAGTTTTACTGGACGTGAAATTTCCGAAGACGAAGCCCAAGAAATCATT
GCAACTATGGTCGAGCCTCAAGCTGATGAGACAAAATGATTTAACTTGGG
GACAGATCGAAGATGCTGGGTGCTGCTACGCGTGGGAAGCCAAGAAAACC
GCCTTCATCCGCCCTTCTCACTGCTTTAAAGAAAATCTCACAAGTTCAAA
AAATCCGTAAGAAACCAAAAGTTGAGGAAATAGAAGATAACACTCCGATA
GTCAACCTTAAAGATAAAACTGATGAGGATACATCTAATACACGAAATGA
TGATTTGAAGACACCACCAGCTCTGGTGACGGGGGATGCATCCACCAAAG
AGGAACATCAAAAAGACAAATCAGACGACCAAAACGCCCTATTTCGAGCA
CCCGGTGGACCTTATTATAAATACAGCCCTGATAATAAAATGAGACTTAA
CGAGAATTTGAATTCCTCATTGAAGGAGCGCACAATCAAATCACAAGAGA
AGAACGTAAGAAAATTGAAGAATTTGAACGTGAACAACTGCAAAGAGAAG
AAGAAGTAAGAAAAAGGGAAGAAGAAGAAGAACAAGCTATTCAAATGAGA
ATTTCTCAAAGTGCTGATGCTGATCCAGAAATGACCAGTGTCTTTGGTGG
GCAAATGTGAATGAAAATAATTCCACCAATGTACCTATTGGAAACCCAAC
TACAAAGCCAGTCGGTGTGTTAGATTTCATTGATTTCGTTCGTGCAATGT
CGGGCGTTACCAAGGAACCACTGGATGAATGGGATTTGAAACAAGTGTTC
AAAGTATTTGATGTGGATGATGATTCGTTTATTTCACCACCAGAAATGCA
TCGAGCTTTCTTAACGCTTGGTATCGATTTGACTCGATTGGAAATTAATG
ATATTTTTCGAGAATTTGATCAAGATGATGATGGCCTGATTTCTTTTGAA
GAACTATTCACATGCTTTCAAGAATTTGACATTTTCGGTCGTGGGGTCAT
TGATGCATTTTCAATCAAACATGTATCGAGTTTTACTGGACGTGAAATTT
CCGAAGACGAAGCCCAAGAAATCATTGCAACTATGGTCGAGCCTCAAGCT
GATGAGACAAAATGATTTAACTTGGGGACAGATCGAAGATGCTGGGTGCT
GCTACGCGTGGGAAGCCAAGAAAACCGCCTTCATCCGCCCTTCTCACTGC
TTTAAAGAAAATCTCACAAGTTCAAAAAATCCGTAAGAAACCAAAAGTTG
AGGAAATAGAAGATAACACTCCGATAGTCAACCTTAAAGATAAAACTGAT
GAGGATACATCTAATACACGAAATGATGATTTGAAGACACCACCAGCTCT
GGTGACGGGGGATGCATCCACCAAAGAGGAACATCAAAAAGACAAATCAG
ACGACCAAAACGCCCTATTTCGAGCACCCGGTGGACCTTATTATAAATAC
AGCCCTGATAATAAAATGAGACTTAACGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000858XLOC_000858Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001646-exon-sc0000011-1575043694:209113..209719TCONS_00001646-exon-sc0000011-1575043694:209113..209719Clytia hemisphaericaexon
TCONS_00001646-exon-sc0000011-1575043694:208154..208193TCONS_00001646-exon-sc0000011-1575043694:208154..208193Clytia hemisphaericaexon
TCONS_00001646-exon-sc0000011-1575043694:207723..207869TCONS_00001646-exon-sc0000011-1575043694:207723..207869Clytia hemisphaericaexon
TCONS_00001646-exon-sc0000011-1575043694:206692..206982TCONS_00001646-exon-sc0000011-1575043694:206692..206982Clytia hemisphaericaexon
TCONS_00001646-exon-sc0000011-1575043694:205190..206184TCONS_00001646-exon-sc0000011-1575043694:205190..206184Clytia hemisphaericaexon
TCONS_00001646-exon-sc0000011-1510915933:209113..209719TCONS_00001646-exon-sc0000011-1510915933:209113..209719Clytia hemisphaericaexon
TCONS_00001646-exon-sc0000011-1510915933:208154..208193TCONS_00001646-exon-sc0000011-1510915933:208154..208193Clytia hemisphaericaexon
TCONS_00001646-exon-sc0000011-1510915933:207723..207869TCONS_00001646-exon-sc0000011-1510915933:207723..207869Clytia hemisphaericaexon
TCONS_00001646-exon-sc0000011-1510915933:206692..206982TCONS_00001646-exon-sc0000011-1510915933:206692..206982Clytia hemisphaericaexon
TCONS_00001646-exon-sc0000011-1510915933:205190..206184TCONS_00001646-exon-sc0000011-1510915933:205190..206184Clytia hemisphaericaexon
TCONS_00001646-exon-sc0000011-1491911889:209113..209719TCONS_00001646-exon-sc0000011-1491911889:209113..209719Clytia hemisphaericaexon
TCONS_00001646-exon-sc0000011-1491911889:208154..208193TCONS_00001646-exon-sc0000011-1491911889:208154..208193Clytia hemisphaericaexon
TCONS_00001646-exon-sc0000011-1491911889:207723..207869TCONS_00001646-exon-sc0000011-1491911889:207723..207869Clytia hemisphaericaexon
TCONS_00001646-exon-sc0000011-1491911889:206692..206982TCONS_00001646-exon-sc0000011-1491911889:206692..206982Clytia hemisphaericaexon
TCONS_00001646-exon-sc0000011-1491911889:205190..206184TCONS_00001646-exon-sc0000011-1491911889:205190..206184Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001646-proteinTCONS_00001646-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000011supercontigsc0000011:205190..209719 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.811991	0.974546	0.493802	0.319736	0.153427	0.0606201	2.53537	2.9814	17.4329	9.5422	20.4137	16.0639	0.113559	0.183353	0.46299	0.243643	4.3131	6.22995	0.0663972	0	16.6435	15.1831	5.1527	7.85329	10.2536	14.3443	1.82832	0.548423	0.138653	0.0706329
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00001646 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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