TCONS_00001616 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001616
Unique NameTCONS_00001616
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4586

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001616 ID=TCONS_00001616|Name=TCONS_00001616|organism=Clytia hemisphaerica|type=transcript|length=4586bp
ACCTTTtttttcttatgccgaagccAGTCAAAGTGATGTCAAACAGTCAG
GTCAATAAAGTTAAAGTAATTTTGCATTGTGACCAAGAATCATTTTAAAT
CTTCAATATTATTCAGGAAAagataataaaataaatatgttaGACTTAAC
TGTAAACCAAATagatgaatttgaaaatgttattaagATGAAGGAAGATA
ACTCAAACAGTGACGATGAGCCCATTATCAACATTAAGAAGAAAAGGGAA
ACAAAGAAGCTCTCTTATGACGAAGTGTCTGGAAGTTCTCCGTCGGATAG
TGGTGTTGATGATAACGACAGTGACTTTAAACCTGATGAAAGTGAAAAAc
ccaaaacaaaaaaagcatCAATGAAGAAAAAGAGTTCACCAAAGAAGCCT
ATGAAAAAAGCATCTAAGAAAGCAATGGTTGACAAAACAAATGATGGTGG
GAAAATTATGGGAGATAGCGAAGTCAGTGGTGTAAGCAGTGATTCATCAT
CTTCGTCCTCTGAAGATGACAATGCTACATTTGCTcaaaaaattcgtcaa
aaacgtCAACGTCAAGATTTGAACTCATCTCAAAACAAAAGTCCTACTGC
TACAAGTAACCAAATCACTGAACCAAAGAAAAAGGTTGAATTAGACTCTT
CAGAAGATGAGCTATATGACGAGGTTGTTAAAAATATTCCATCTAAAAAA
AAGGAAACTGCCAAAGCACAGAAAACGAAACCCAAAGTAGGAAAATCtaa
accaaaaaagaaaattgtatCAAGTGGAGACGACGATTCTGAGCCCAACC
ACGATTCTGAGCCCAACCACGATTCTGAGCCCAACCACGATTCTGAGCCC
AACCACGATTCTGAGCCCAACTATGAAGGGTCAGATTCAGACGAAATTGT
CCACAAAATATCTCCAAAGCGAAAGAGTGTCAAGTCAAAAAAGAAGAGAG
TCAAGAATTTTGAATCAAGTGACAGTGAAGTCATTGAAGGAGGTGAACAA
TCTGAAGATTCATTATTTGGTGACTCAAATTCTGATACAGAAAAGCCTtc
aaaaaggaacaaaaagaaatctaagcgtcaaaataaacgaaaatcaAAGA
GCACGATTCATTCTGACGATGATAATGAGAAATCAAACAACAGTGGTACA
GATTCTGAACAGGATGAAAAAGATTTGGATAAAGAGATGAAACACCTTGA
TCAAAGTGATATCAAACCTAAGAAGAAGAGACAGGCTGCAAAAGAGAGTG
AAAGAGCATGGAAAGAAATCAGGAGTGAGCAGCAAAGGTTACAAAGAGAG
AGAAAATGTGAAATTCCTTACCATGAACCAAAAGCCAAATCTGTCAAAGA
GTTTTTGAAGCGTGTTCCAAACCTGACATCAACAAGGACATGTAAATCAC
CTGGAAGTGATGGTATTATCAACCTAGCAAATGAAACAGATACTCCACCA
AAGAAATCCATTTTCTCAAGCTTTCCCACTTTGAAACCTGAGACCAATGG
TGATTTTGAATTTGTCTTCAACGATGATGGTGACAATGTAGAATCAAAGA
AACAAGCAAAAACTCCTAAACCAGTGACCAATTTTATCAAGaAATTTGAA
AGACAAGTGAAGACACCATCTTCTGAGAGTAAACAAGTCAACAGTAAAAA
ATCACCTGAAAAGCCTTCTCTATCAAATACTCAACTGAAGATAGACTTGA
AACAGAAGATTCGGCAACAACGACAAAAACAGATGGAACAACTCGAAGAA
AAACGTAAGAAGTTGGAAGAACAAATTGCATTGGAAGAAGGGGATGAATC
GTTTGATGATGCAATCGATGATGAAAGTGATTCGAGTAACAGTGAACATG
AAGAAGGGTCAGCTGATGAGGAGATAGAGAAATGGAATCTGGAGGATAAT
CGAATTCGTTTAGAAGAATCGATTGCGGAAACTGAACAAAACGACAAGAA
CAAcaaagaagaagaacaaaaagaagaaagcgATGAGAAAATGGAGACTA
CAACTGAAGAttcaaactctaattttgttgattttcaacGTGTACCAACT
CAATTATTGAAAAGTGATATCTTGAACTCTACAAGTACAACTGATGGCTT
CCAACGAAAGgaTTCGTTTTTGTCATTACCCTGTGAAAACACTCAAGACC
TTTACAAAGACGACAGTCGAGTTTCATTACCACAAGACTCAGATGACGAG
AGTGAAAACGAGCTGGGACCAAATTTCCATCTATCTTTGGACGAAGAGAC
GCAATACTCTCAATCGCTTTTAGATTCGCAGGGATTCTTGAAGAAAGACA
AGAAAGACAAATTCGAAAAACCAAAagaagaacatccaaaattgtttGGA
AATAAAAGCACAGACGATAACACATCAAACCAATCATTCTCCATGACCCA
AATGTTAGGTTTATGTTCTGGTAAATTTGACGATTCAAACAGTATCCCGT
TGACAATGtcttcttccaaaggctctaacaaTCGCCAACATCAATGTTCA
TTGGATTTTCAAGATGAGAATGCCAATAATTCATTTTCACATTTCACATT
TCGACAAAGCAATGAAGGAGCCACACAGACTCGGGAAAAAGGTCAATCTC
AATCGCAATTCAATTTTGCATCTTCGTTCACTGAGAAAAGTCAGGATAAC
ACCGACAAGGAGAAAGAGATCGGAAGTGAAACTAAATCAAACGATGACAA
CGCCACTGATAACAGCACCAATACGGATATACTGAAGAGTAGTGATAATA
CAAAcaatacttttgaaaataaagaaatcataACTACTGATGAAAAGGAG
GAGATATCTCTGGACAAAGATCAAGTAGCGGGggaagaaaataatgaaat
gaataAATCAGACAGTGTTGAAAGCTCAGTAGATCTAAATGATAAGAAAC
TTGGAGATGATAAAACTAAAGAGAATACAGATAATAGAGATAATGATAAA
GAAAAAGCTGTTAATGACGGAGATAATAGTTTTCAACCTGATGGAGATAA
CCAAGAAGACAATGACGGAGATAATGATGTGGGACATGATGGAGATAATA
ACGAAGATGATGGAGATAACCAAGAAGAAAATGACGGAGATAATGAAGAG
GGACATGATGGAGATAATAACGAAGATGATGGAGATAACCAAGAAGAAAA
TGACAGAGATAATGAAGAGGGGGACGGGTCACATTATGGAGAAGATGAGG
AGgattatgaaaaagaaaatgaagagttGAAAGAATGGAATCTACACCTT
CAGGAATCACAAAGCAACACCAAGAAAAAATGGAAGAAGAAAGCTTTCTA
TGAAGATGAAGCTGAGTTATCCGGAAGTGACGTCGGATCAGATGACGAGG
ATCTGGGCAGTGAATATGATGAATACGAAGTAGACTCTGATATTGAGAAT
CTCCCCGATGATGAAAAACTGAAGAAACAGTTGCATAAAATTCACCAGAA
GAAAATGAATGATAAAGACAAACACGAAATGCGCTTGTTGCAAGAGCTCT
ACCTCGAAGATGAATTCGGTGGTGGCGAGAAACGAAAACGTAACTTTCGT
TGGCGAAATGTTGACGACAATTTTAACGACAATAATCGTTTGAATAAGGA
AGTCGACGAAGCTGATAATTATTCGGAATTGAAAGAACGAAATCAAGAAA
TGGTGGAACGGaataaatttcttttggaaGTCGAAGAGgagcagAAAAAT
AAAGAGATAGAAATTGACGAAAACAGTCAAATGATATTGGACAAAATCCA
AGCTTCTGGCGAAAAACATGTTTCTTCAAGTCAGCCAATTCAAGTTGGTG
AAGTCAGTCAACGTGTTCCACTTAGAAGATCTGGCTcgtttcttcaaaat
aaaaaatcacaaaaatttcaaaagaacttGTCGTTACCAAATATGCCCAA
GTCAATCGGCAAGAAAGCAAATTCGTTTGTTTTCCAAGCTTTAGAAGAat
caaagaaaacgaaaaagAATTCGACATCGGACGATAAAATGGCACCACCT
CGCAAACGACAGAAAAGCAACAATGATAACCAAAAAGCACCGAGACTAAC
GGCTAAAAGTATTTTTGCTCTTCTATAGCCCTCCACAATGATGATTTTTT
ATACGATTTTGATGTACatattaataataatttttgagAATCGCTAGTTT
AAAATTTGGTAGGAAGCTTATGtttcatgttttatttttattctaaaCCA
CATCCAACCACTCTTTCGGTTTTGTTGTACATATAATTACAAATGGGAAT
CTTCTTCTATGATTTTCTccctaccttaagggaactcaTTTTCatggtcg
aaaaaaaaattcaaaaaatcgcatttcgcgggaattaattttcgtggTTT
TCCCTATTTTGGACACATCTCTTTAATTTTCCTAGATATGGTAAAATGGC
CAAATTTGTGATTCGAGGGTTCTACCCTTAAGGTAGTTCGAGATATAGTT
AATAAAGTGTCATCTCCCTTGGCAAAATCCCTTCGCTTTATAACCTGATT
GTACCCTATAAAACTTGACCaaatttcttgttgtttttttgtaaatataa
tCTATataaatttagttttttgaaGTTATTTTAGTC
Run BLAST on NCBI

transcript from alignment at sc0000011:943350..954885+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001616 ID=TCONS_00001616|Name=TCONS_00001616|organism=Clytia hemisphaerica|type=transcript|length=11536bp|location=Sequence derived from alignment at sc0000011:943350..954885+ (Clytia hemisphaerica)
ACCTTTtttttcttatgccgaagccAGTCAAAGTGATGTCAAACAGTCAG GTCAATAAAGTTAAAGTAATTTTGCATTGTGACCAAGAATCATTTTAAAT CTTCAATATTATTCAGGAAAagataataaaataaatatgttaGACTTAAC TGTAAACCAAATagatgaatttgaaaatgttattaagATGAAGGAAGATA ACTCAAACAGTGACGATGAGCCCATTATCAACATTAAGAAGAAAAGGGAA ACAAAGAAGCTCTCTTATGACGAAGTGTCTGGAAGTTCTCCGTCGGATAG TGGTGTTGATGATAACGACAGTGACTTTAAACCTGATGAAAGTGAAAAAc ccaaaacaaaaaaagcatCAATGAAGAAAAAGAGTTCACCAAAGAAGCCT ATGAAAAAAGCATCTAAGAAAGCAATGGTTGACAAAACAAATGATGGTGG GAAAATTATGGGAGATAGCGAAGTCAGTGGTGTAAGCAGTGATTCATCAT CTTCGTCCTCTGAAGATGACAATGCTACATTTGCTcaaaaaattcgtcaa aaacgtCAACGTCAAGATTTGAACTCATCTCAAAACAAAAGTCCTACTGC TACAAGTAACCAAATCACTGAACCAAAGAAAAAGGTTGAATTAGACTCTT CAGAAGATGAGCTATATGACGAGGTTGTTAAAAATATTCCATCTAAAAAA AAGGAAACTGCCAAAGCACAGAAAACGAAACCCAAAGTAGGAAAATCtaa accaaaaaagaaaattgtatCAAGTGGAGACGACGATTCTGAGCCCAACC ACGATTCTGAGCCCAACCACGATTCTGAGCCCAACCACGATTCTGAGCCC AACCACGATTCTGAGCCCAACTATGAAGGGTCAGATTCAGACGAAATTGT CCACAAAATATCTCCAAAGCGAAAGAGTGTCAAGTCAAAAAAGAAGAGAG TCAAGAATTTTGAATCAAGTGACAGTGAAGTCATTGAAGGAGGTGAACAA TCTGAAGATTCATTATTTGGTGACTCAAATTCTGATACAGAAAAGCCTtc aaaaaggaacaaaaagaaatctaagcgtcaaaataaacgaaaatcaAAGA GCACGATTCATTCTGACGATGATAATGAGAAATCAAACAACAGTGGTACA GATTCTGAACAGGATGAAAAAGATTTGGATAAAGAGATGAAACACCTTGA TCAAAGTGATATCAAACCTAAGAAGAAGAGACAGGTACTTATTAATggtc ttttgatattttatttttggttttgaaaattttatttcattcaatTAGGT ATTGCAGGAACTAGACTTAATTTTGATTATTGATTAATAGTTTAGACTAT GGGTAAAGACTACCCATCAAATCGAAATTCATTCTCTTCTAATTTTATTG TCTCCGATAGAAGATTTACTTTAACAGTTTGTTTCAAGGGAAAAGGATGA CAAGTTACAAATAACACCAAATACAACTGAATACAACACACGAACCTTGT TTCAATAACTAagtaattttaagtaattctaAATAATAGTTTCCATTTGT AgatttatgatatttttctcAGAATTTCTCCACGTTTTCCCCATATTTCT ATTAAGGCTGCAAAAGAGAGTGAAAGAGCATGGAAAGAAATCAGGAGTGA GCAGCAAAGGTTACAAAGAGGTAAATAATACATTATTTCTTAACAAAATC ATtgttgataaacattttttgttgCAAAATTTCCTGGCATCAAAATTTAC GTTTCAGGTTGAAATGAAAATGGTTAAATCCAACCAACTTAGATTATAAA AGTTTTAGTGATGCTGATATTAGATGCTACTTTGAACTtgcattttttgt attttttttccagAGAGAAAATGTGAAATTCCTTACCATGAACCAAAAGC CAAATCTGTCAAAGAGTTTTTGAAGCGTGTTCCAAACCTGACATCAACAA GGACATGTAAATCACCTGGAAGGtattattgttttcatttattaaGAATT ACATTGTAAATGTGACTCTTCAACCTTAGAATGAGTTACGATTCAAAGGA ACATGTTTGGAAAATACAGTCTTTTTATTACACATCCTATAATATACCAA AGTATAGTTACAATGATGACGACATTAATGAAATTTAACATCACACTTGA TAAGTTTCTCTCTTATTAAATgattaaataattaaataataataaaataa tacaataaataCAATTGTTTTTCCTATTTAGTGATGGTATTATCAACCTA GCAAATGAAACAGATACTCCACCAAAGAAATCCATTTTCTCAAGCTTTCC CACTTTGAAACCTGAGACCAATGGTGATTTTGAATTTGTCTTCAACGATG ATGGTGACAATGTAGAATCAAAGAAACAAGCAAAAACTCCTAAACCAGTG ACCAATTTTATCAAGGTGcgctaaaaaataatttatgctattttttcaaa aactcttATTATAATTAAAGTCCATTCTCTTTTTTAAGTGTGCTCTAATT CCTGTTttgtttgtcatttttcaatgaATGCTTCATTCCTATCATATCTG ATCATATTTTATATACCAGTGGAAAAATAGTGCAGAGTActataaattct tgaaaaataactcttttaaaggattttagaaaatgaagatgaaaaataaa aaagaagaaaaatgaatctTACTAATCAGGTTAGAAGGTGCTAGATAGGT TCACCTGCCAGTGCTTCAATTACAANAGTGATGCTGATATTAGGTGCTAC TTTGAACTtgcattttttgtattttttttccagAGAGAAAATGTGAAATT CCTTACCATGAACCAAAAGCCAAATCTGTCAAAGAGTTTTTGAAGCGTGT TCCAAACCTGACATCAACAAGGACATGTAAATCACCTGGAAGGtattatt gttttcatttattaaGAATTACATTGTAAATGTGACTCTTCAACCTTAGA ATGAGTTACGATTCAAAGGAACATGTTTGGAAAATACAGTCTTTTTATTA CACATCCTATAATATACCAAAGTATAGTTACAATGATGACGACATTAATG AAATTTAACATCACACTTGATAAGTTTCTCTCTTATTAAATgattaaata attaaataataataaaataatacaataaataCAATTGTTTTTCCTATTTA GTGATGGTATTATCAACCTAGCAAATGAAACAGATACTCCACCAAAGAAA TCCATTTTCTCAAGCTTTCCCACTTTGAAACCTGAGACCAATGGTGATTT TGAATTTGTCTTCAACGATGATGGTGACAATGTAGAATCAAAGAAACAAG CAAAAACTCCTAAACCAGTGACCAATTTTATCAAGGTGcgctaaaaaata atttatgctattttttcaaaaactcttATTATAATTAAAGTCCATTCTCT TTTTTAAGTGTGCTCTAATTCCTGTTttgtttgtcatttttcaatgaATG CTTCATTCCTATCATATCTGATCATATTTTATATACCAGTGGAAAAATAG TGCAGAGTActataaattcttgaaaaataactcttttaaaggattttaga aaatgaagatgaaaaataaaaaagaagaaaaatgaatctTACTAATCAGG TTAGAAGGTGCTAGATAGGTTCACCTGCCAGTGCTTCAATTACAACTCAA ACCACAATGTTTTGATCATATGGCTGTGAAGTTAAAGTCTCCCTCATTCT ATctatttatattttctttcagaAATTTGAAAGACAAGTGAAGACACCAT CTTCTGAGAGTAAACAAGTCAACAGTAAAAAATCACCTGAAAAGCCTTCT CTATCAAGTAAGTGGTTTAGTGGCTTCAGTGCTTCAAACTTTCAACCATC CTATTCAGATTCACTGATATGGCTAAACTTTCTCCAACAATCTCAATGAA ATTTTCTATGAATTTTCATTCTTCTCAAGATACTCAACTGAAGATAGACT TGAAACAGAAGATTCGGCAACAACGACAAAAACAGATGGAACAACTCGAA GAAAAACGTAAGAAGTTGGAAGAACAAATTGCATTGGAAGAAGGGGATGA ATCGTTTGATGATGCAATCGATGATGAAAGTGATTCGAGTAACAGTGAAC ATGAAGAAGGTATTCTTTTCAAGAAGCTCAATAAATTATCATGCCTCAAG TGACTAGTTTTAGGGGTCATTTTAGTTTTAGGGACAATTTAATGATTGGC TATAATAATTCCCTTAGTCAATATTATTTGCAAAGCTAAttgatgaatat ttttttctatatttgaaaataatttatttgttGAAAAATCCTATTAGAAT ATCATTTATCAGATCATAGAAAAAACTTCACCTACAAGAAGTTAAATTCA CGGGAATGATCCCACCGAAAAACCTCCaagttttaagaaaaaaagtgtaC CTAATTTGCTTTTCGAGTTTGAATACGAgtcttaaaacttaaaaaaataa tgaatgtGGGGAAAGGGATTCTATTAAGGTTCTAGGggtcataaaaatgt aaaattaacAAACAGGCACCTGAGAGTATAATTTATCTAACATTCAACAT accatcatttttattaaagGGTCAGCTGATGAGGAGATAGAGAAATGGAA TCTGGAGGATAATCGAATTCGTTTAGAAGAATCGATTGCGGAAACTGAAC AAAACGACAAGAACAAcaaagaagaagaacaaaaagaagaaagcgATGAG AAAATGGAGACTACAACTGAAGAttcaaactctaattttgttgattttca acGTGTACCAACTCAATTATTGAAAAGTGATATCTTGAACTCTACAAGTA CAACTGATGGCTTCCAACGAAAGGTAAAAACTTTCTCTTCCATCAGACag ataacacccctgtgtcagacTTGGTAACACAAATGCTCAAAATTTCCTCC CGGGTGGCAAAAGTTACTGCCCTGGTACTGGGAAATTGATTTAAATCAAC ATTCGATATACAAgggaaaaattgcactccaaaactatccccACTGGATG TTTATCCCTTATcgagatttcgatagaaatgtTTATCCCCTGTTGTGGAA AAAAATTCCACCGTAGTCTTGGGATTGGGGTGTTAGATATAATTGTCTTC TTAAGATAATTTACTATAATTTGGTTTTGGGAAACAATGTAAAATGATCT TCACTTCCATACATATACATAATAGTCCATATATTTAatgttttactttc ttttttttcaaggaTTCGTTTTTGTCATTACCCTGTGAAAACACTCAAGT AAGTTCGTCGATACTTATCATTTTCAAATTGGTTGATCCTCCTGAATGAg ttcaataaaaatttcaaacacagaagcgacttcattttattttcataaaa tcaaaaatttatttaagacGTTTCGGTGTCATCCGACCACCATCATCagt ttaaaaacattgaaatgaaaatttctaaataaatttttgattttatgaaa ataaaatgaagtcgcttctgtgtttgaaatttttatcattttcagaattt catAGGAGCTGTTGTATTCATCATTTTCATACAAATCTGAGGTTATGTTA CTAAGCTGGAGACAGGCTCTTAATCCTGGgcaagcaaaattttttgacca aagtttttttgaattgataCCTTATTGGTAGCTATTagtactcaatagcg gtgtaatgCATCGAAAGCCTTCCTTGATACAGCACCTTTTATTAGGAAAG CTTTAACACTTCAATGACTTCATTGTGGGTACCACTTCTAAAAAAAGCTC CAATCAAAGATTGCAGATATAGCTCAGCAAGGGTTTGTAAAGGCCAGTGG TTACGAACTATACTATTTTTAGTGGATAATCTTCTTCTTCTTAATCTTTC AGCCAATACTGTCAAAAGATTTCGTCTACTTGGTACTATAATCGACTCAC TATCTTTTAGGACCTTTACAAAGACGACAGTCGAGTTTCATTACCACAAG ACTCAGATGACGAGAGTGAAAACGAGCTGGGACCAAATTTCCATCTATCT TTGGACGAAGAGACGCAATACTCTCAATCGCTTTTAGATTCGCAGGGGTA CGTGTACTGAGGCAAATTTATGAAATTCAATGATCCTGGAAATTCGCCAG GAATGTTTTGCCGGATGAGAAAATTTCCGAGAACCTTCTTATATATCCAT AAGCAACTGATAATTTAGACCAATAAAGAATAAAAGCAAGTCCGAGAAAA TTCATCACGCCAAGATATTCAaagcaaaagatgaaaattttgatttaaaa acagcTATATTTCGTATAGTATCATATACATCATTCAGGCAAATGATTTC TGTAAAAGNCACTTGAAAAGgctcgtccaccccctgtatggaaattttat ggaacagccctttcaaagcaaaagatgaaaattttgatttaaaaatagcT ATATTTGGTATAGTATACATCATTCAGGCAAATGATTTCTGTAAAACAAA AGTTGAGCTTGAAAAcgatttcaaaatctaaaacaatTAAATGACTAATT AAAATGCAGTAAAACTAAGAAAATAGATACAAATCTCTAGAGGCTTTAAG GCCATTATTCAAAATAGGAGAATGCCTTTTGATATAAATTGCttctttta ttaaaagaatattCCATTTATCAGACCTATCAATAATACGAGTGTTATTT TCTATTGTGTTCAAAAAATAttccttttgttcttttttgtttaatggttt ttgttCAAACAAGAGCATTTTGTAAATATGTATATATAAGACAACAGTTT CCAATATTAAAAGATGACGACATTAGAACTCCTTTAAtcggataaatttt cgcgaggtTTAATTTAGCTTTTATATAGCGACTTTCGATAAATTTTGTAC TGATTTGCAaaaataaatccagaaaatttcgcgtcAATCTGATTAAATTA CTCGACTTCTGTCCGTCAAATAGCAAGTAATTTATCCtaaaaaatatgat ttagatTTACAGCAATTTGTTTTCCTCAAATACTAATGATGTTAATAATT TTTCCCTTCTTAGATTCTTGAAGAAAGACAAGAAAGACAAATTCGAAAAA CCAAAagaagaacatccaaaattgtttGGAAATAAAAGCACAGACGATAA CACATCAAACCAATCATTCTCCATGACCCAAATGTTAGGTTTATGTTCTG GTAAATTTGACGATTCAAACAGTATCCCGTTGACAATGtcttcttccaaa ggctctaacaaTCGCCAACATCAATGTTCATTGGATTTTCAAGATGAGAA TGCCAATAATTCATTTTCACATTTCACATTTCGACAAAGCAATGAAGGAG CCACACAGACTCGGGAAAAAGGTACATACGTGCAGATTAGTGTTGGATTT TGTTAAATCTCGAAACACaaatcttttttaattcaaagtaTCCTTTTCCT ATTCTCTCATTGCTTTTATACCATCTTGGATCAATTTGTTGAATTACAGC CAAATTATATTGACTCTGGATGTTCGTCACTTCTTTTCTCCACTTATTTA TATTTATGAATTGTTCTTTTATTTCTTAAGGTCAATCTCAATCGCAATTC AATTTTGCATCTTCGTTCACTGAGAAAAGTCAGGATAACACCGACAAGGA GAAAGAGATCGGAAGTGAAACTAAATCAAACGATGACAACGCCACTGATA ACAGCACCAATACGGATATACTGAAGAGTAGTGATAATACAAAcaatact tttgaaaataaagaaatcataACTACTGATGAAAAGGAGGAGATATCTCT GGACAAAGATCAAGTAGCGGGggaagaaaataatgaaatgaataAATCAG ACAGTGTTGAAAGCTCAGTAGATCTAAATGATAAGAAACTTGGAGATGAT AAAACTAAAGAGAATACAGATAATAGAGATAATGATAAAGAAAAAGCTGT TAATGACGGAGATAATAGTTTTCAACCTGATGGAGATAACCAAGAAGACA ATGACGGAGATAATGATGTGGGACATGATGGAGATAATAACGAAGATGAT GGAGATAACCAAGAAGAAAATGACGGAGATAATGAAGAGGGACATGATGG AGATAATAACGAAGATGATGGAGATAACCAAGAAGAAAATGACAGAGATA ATGAAGAGGGGGACGGGTCACATTATGGAGAAGATGAGGAGgattatgaa aaagaaaatgaagagttGAAAGAATGGAATCTACACCTTCAGGAATCACA AAGGTATGTTAATGTTAATTTATTGGAAATGTTCTCCCTTAGAGTGATTC AGATTTTAGAAGTTTTAACTCTTCCATCTGCAGACGGAAAACCGCGAAAT TGAAAATTCTTGTGATTCCGTTTtaataacaaactatataaagaaGAGCT TTCGCAAAGTTAGAgtcaaatttcaagaaattccGTCCGGATTCAACAAA GCTGGTTAAAACACTATATTGATTATTGTACAATGTTCTAGTCACTTCAT GACTAATCCAACGAGTatctttttttatgaaattaaaaGAAAGTCCTTTT ATGGAAGCTGAGAGACAGACAGTCAACCCTAACATGAATCCCTCTGACTT TTTTTTTCAGCAACACCAAGAAAAAATGGAAGAAGAAAGCTTTCTATGAA GATGAAGCTGAGTTATCCGGAAGTGACGTCGGATCAGATGACGAGGATCT GGGCAGTGAATATGATGAATACGAAGTAGACTCTGATATTGAGAATCTCC CCGATGATGAAAAACTGAAGAAACAGTTGCATAAAATTCACCAGTAAGTA ACGTTATTTTATATCGTCAATAAAATCTTGTGATTTGTGTGATCTTTATT TATTGATCAATACTTCGGCTTTCAAATGACCAGCTAAAGGTGCATGCATG AAACTATACTTCAGCTGCTTATCCCAAGAATTTCTCATCATAAAGCTCGA GTTACACGGCCTGTTGTATCCCACCCATCGGCATCTGACTGGCAAAATAT TTCTAACAAGTAGAATCTGGTAAATGGGTTCATTTTATTTAGGATATCAC AGCTTGTTTGGGAAAAttcgaattcaaaatttcaCTTAAAGATCTGACTA ATGTCCCACATGGGATTTTGgattattgggctcttccagaaaatgttcgt acaccccgcgtggaggatatattgtctgggggtagcgaaaaatttgaaaa atcgaaatttgccTTGTCTAAGGGGTAAATTTGCACTATCtaaatataaa tataatatcaaaagtcactttgtctgggggtaaatcactgaaaatggTCA TATCCTCCATAcccatatacaatttttttctggaagagcccattgttaAT AATCAACGGTTGATTAtggattaaaattttcttatcatATAGAATAGTTT CTTGCTTAACGTATTTTGAACAAGTTATTATAAAATTGCATCAATCCAAA TTTTTAGGAAGAAAATGAATGATAAAGACAAACACGAAATGCGCTTGTTG CAAGAGCTCTACCTCGAAGATGAATTCGGTGGTGGCGAGAAACGAAAACG TAACTTTCGTTGGCGAAATGTTGACGACAATTTTAACGACAATAATCGTT TGAATAAGGAAGTCGACGAAGCTGATAATTATTCGGAATTGAAAGAACGA AATCAAGAAATGGTGGAACGGaataaatttcttttggaaGTCGAAGAGGT AGAATTTATTGCTTACGttcttttatttgataattAAAGGACCTCATTGA ACGTATCTTCTTatatttgcttacacagcatttttaaacaaaaaactacT TTCTCAACTTTCGGCACCGCGTGAGTAGAAATTTAAAGTCGTTTTTGTTA AGTAAACATTGATTCAATCCTTTAATTTTGTTAAAAGATGGTTCGAATGA ACTACAACGAAATAATCTCCAATGCCCTTCAATTTTCACTTTGTGCTTAT GAAGCCTAAtaaatttttatccttttttttccaggagcagAAAAATAAAG AGATAGAAATTGACGAAAACAGTCAAATGATATTGGACAAAATCCAAGCT TCTGGTACGTTTTTATTTAGTGTTTTGCTGGTACTTTTCCATGAATTCTT TTcatcttggatttttttagTGCAGTAAACATTGATCAAGTTTAGTTCTA AATCAGACTTATATTAAGGATTTATAGGTTTTTGAAGACTTCCCTTTAAT TAGAATGGAATTTTCTGACCTTTAGACTAAATATGTTTCCTTTATAATTT TCAGGCGAAAAACATGTTTCTTCAAGTCAGCCAATTCAAGTTGGTGAAGT CAGTCAACGTGTTCCACTTAGAAGATCTGTAAGTGCTTTATCAAACATGT CGTCCTTCAGGTTCTGTCCCTCttaatttttaggaaaatttccaTGTACT CTGGCTTCAAAGACCTTGCGCCAAAAATTGCCTAAAAccatctttttcta attttactgAAAGGCATTGAAATAAGTTGTATGTTATAAAGGTCATTACC CAGAAGAAGTTGTCATCCCACCCTGAATGATCTGCAAATTCCTCCTCCCC TAAACCCATGTGCTACCCGAGCTCTATAAATATTATTCCCTAAACTTAGG CCATACTTAAAAACTAAAGTTTACTAATTCTGAATTCACAATGGCTTCCT TTTTAGGGCTcgtttcttcaaaataaaaaatcacaaaaatttcaaaagaa cttGTCGTTACCAAATATGCCCAAGTCAATCGGCAAGAAAGCAAATTCGT TTGTTTTCCAAGCTTTAGAAGAatcaaagaaaacgaaaaaggTACGTtcg aaatatatatatatatttttatcgttcgttcgttcgttcgttcgttcgtt cgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcg ttcgttcgttttgtttcataaattatttctaagatcaatttttaattttt gttaatCTTTTTCCTAGAATTCGACATCGGACGATAAAATGGCACCACCT CGCAAACGACAGAAAAGCAACAATGATAACCAAAAAGCACCGAGACTAAC GGCTAAAAGTATTTTTGCTCTTCTATAGCCCTCCACAATGATGATTTTTT ATACGATTTTGATGTACatattaataataatttttgagAATCGCTAGTTT AAAATTTGGTAGGAAGCTTATGtttcatgttttatttttattctaaaCCA CATCCAACCACTCTTTCGGTTTTGTTGTACATATAATTACAAATGGGAAT CTTCTTCTATGATTTTCTccctaccttaagggaactcaTTTTCatggtcg aaaaaaaaattcaaaaaatcgcatttcgcgggaattaattttcgtggTTT TCCCTATTTTGGACACATCTCTTTAATTTTCCTAGATATGGTAAAATGGC CAAATTTGTGATTCGAGGGTTCTACCCTTAAGGTAGTTCGAGATATAGTT AATAAAGTGTCATCTCCCTTGGCAAAATCCCTTCGCTTTATAACCTGATT GTACCCTATAAAACTTGACCaaatttcttgttgtttttttgtaaatataa tCTATataaatttagttttttgaaGTTATTTTAGTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000842XLOC_000842Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001616-exon-sc0000011-1491911889:943350..944583TCONS_00001616-exon-sc0000011-1491911889:943350..944583Clytia hemisphaericaexon
TCONS_00001616-exon-sc0000011-1510915933:943350..944583TCONS_00001616-exon-sc0000011-1510915933:943350..944583Clytia hemisphaericaexon
TCONS_00001616-exon-sc0000011-1575043694:943350..944583TCONS_00001616-exon-sc0000011-1575043694:943350..944583Clytia hemisphaericaexon
TCONS_00001616-exon-sc0000011-1491911889:944956..945019TCONS_00001616-exon-sc0000011-1491911889:944956..945019Clytia hemisphaericaexon
TCONS_00001616-exon-sc0000011-1510915933:944956..945019TCONS_00001616-exon-sc0000011-1510915933:944956..945019Clytia hemisphaericaexon
TCONS_00001616-exon-sc0000011-1575043694:944956..945019TCONS_00001616-exon-sc0000011-1575043694:944956..945019Clytia hemisphaericaexon
TCONS_00001616-exon-sc0000011-1491911889:945213..945321TCONS_00001616-exon-sc0000011-1491911889:945213..945321Clytia hemisphaericaexon
TCONS_00001616-exon-sc0000011-1510915933:945213..945321TCONS_00001616-exon-sc0000011-1510915933:945213..945321Clytia hemisphaericaexon
TCONS_00001616-exon-sc0000011-1575043694:945213..945321TCONS_00001616-exon-sc0000011-1575043694:945213..945321Clytia hemisphaericaexon
TCONS_00001616-exon-sc0000011-1491911889:945581..945764TCONS_00001616-exon-sc0000011-1491911889:945581..945764Clytia hemisphaericaexon
TCONS_00001616-exon-sc0000011-1510915933:945581..945764TCONS_00001616-exon-sc0000011-1510915933:945581..945764Clytia hemisphaericaexon
TCONS_00001616-exon-sc0000011-1575043694:945581..945764TCONS_00001616-exon-sc0000011-1575043694:945581..945764Clytia hemisphaericaexon
TCONS_00001616-exon-sc0000011-1491911889:947072..947156TCONS_00001616-exon-sc0000011-1491911889:947072..947156Clytia hemisphaericaexon
TCONS_00001616-exon-sc0000011-1510915933:947072..947156TCONS_00001616-exon-sc0000011-1510915933:947072..947156Clytia hemisphaericaexon
TCONS_00001616-exon-sc0000011-1575043694:947072..947156TCONS_00001616-exon-sc0000011-1575043694:947072..947156Clytia hemisphaericaexon
TCONS_00001616-exon-sc0000011-1491911889:947279..947458TCONS_00001616-exon-sc0000011-1491911889:947279..947458Clytia hemisphaericaexon
TCONS_00001616-exon-sc0000011-1510915933:947279..947458TCONS_00001616-exon-sc0000011-1510915933:947279..947458Clytia hemisphaericaexon
TCONS_00001616-exon-sc0000011-1575043694:947279..947458TCONS_00001616-exon-sc0000011-1575043694:947279..947458Clytia hemisphaericaexon
TCONS_00001616-exon-sc0000011-1491911889:947919..948172TCONS_00001616-exon-sc0000011-1491911889:947919..948172Clytia hemisphaericaexon
TCONS_00001616-exon-sc0000011-1510915933:947919..948172TCONS_00001616-exon-sc0000011-1510915933:947919..948172Clytia hemisphaericaexon
TCONS_00001616-exon-sc0000011-1575043694:947919..948172TCONS_00001616-exon-sc0000011-1575043694:947919..948172Clytia hemisphaericaexon
TCONS_00001616-exon-sc0000011-1491911889:948562..948597TCONS_00001616-exon-sc0000011-1491911889:948562..948597Clytia hemisphaericaexon
TCONS_00001616-exon-sc0000011-1510915933:948562..948597TCONS_00001616-exon-sc0000011-1510915933:948562..948597Clytia hemisphaericaexon
TCONS_00001616-exon-sc0000011-1575043694:948562..948597TCONS_00001616-exon-sc0000011-1575043694:948562..948597Clytia hemisphaericaexon
TCONS_00001616-exon-sc0000011-1491911889:949260..949396TCONS_00001616-exon-sc0000011-1491911889:949260..949396Clytia hemisphaericaexon
TCONS_00001616-exon-sc0000011-1510915933:949260..949396TCONS_00001616-exon-sc0000011-1510915933:949260..949396Clytia hemisphaericaexon
TCONS_00001616-exon-sc0000011-1575043694:949260..949396TCONS_00001616-exon-sc0000011-1575043694:949260..949396Clytia hemisphaericaexon
TCONS_00001616-exon-sc0000011-1491911889:950363..950670TCONS_00001616-exon-sc0000011-1491911889:950363..950670Clytia hemisphaericaexon
TCONS_00001616-exon-sc0000011-1510915933:950363..950670TCONS_00001616-exon-sc0000011-1510915933:950363..950670Clytia hemisphaericaexon
TCONS_00001616-exon-sc0000011-1575043694:950363..950670TCONS_00001616-exon-sc0000011-1575043694:950363..950670Clytia hemisphaericaexon
TCONS_00001616-exon-sc0000011-1491911889:950880..951552TCONS_00001616-exon-sc0000011-1491911889:950880..951552Clytia hemisphaericaexon
TCONS_00001616-exon-sc0000011-1510915933:950880..951552TCONS_00001616-exon-sc0000011-1510915933:950880..951552Clytia hemisphaericaexon
TCONS_00001616-exon-sc0000011-1575043694:950880..951552TCONS_00001616-exon-sc0000011-1575043694:950880..951552Clytia hemisphaericaexon
TCONS_00001616-exon-sc0000011-1491911889:951910..952092TCONS_00001616-exon-sc0000011-1491911889:951910..952092Clytia hemisphaericaexon
TCONS_00001616-exon-sc0000011-1510915933:951910..952092TCONS_00001616-exon-sc0000011-1510915933:951910..952092Clytia hemisphaericaexon
TCONS_00001616-exon-sc0000011-1575043694:951910..952092TCONS_00001616-exon-sc0000011-1575043694:951910..952092Clytia hemisphaericaexon
TCONS_00001616-exon-sc0000011-1491911889:952757..952997TCONS_00001616-exon-sc0000011-1491911889:952757..952997Clytia hemisphaericaexon
TCONS_00001616-exon-sc0000011-1510915933:952757..952997TCONS_00001616-exon-sc0000011-1510915933:952757..952997Clytia hemisphaericaexon
TCONS_00001616-exon-sc0000011-1575043694:952757..952997TCONS_00001616-exon-sc0000011-1575043694:952757..952997Clytia hemisphaericaexon
TCONS_00001616-exon-sc0000011-1491911889:953284..953353TCONS_00001616-exon-sc0000011-1491911889:953284..953353Clytia hemisphaericaexon
TCONS_00001616-exon-sc0000011-1510915933:953284..953353TCONS_00001616-exon-sc0000011-1510915933:953284..953353Clytia hemisphaericaexon
TCONS_00001616-exon-sc0000011-1575043694:953284..953353TCONS_00001616-exon-sc0000011-1575043694:953284..953353Clytia hemisphaericaexon
TCONS_00001616-exon-sc0000011-1491911889:953554..953627TCONS_00001616-exon-sc0000011-1491911889:953554..953627Clytia hemisphaericaexon
TCONS_00001616-exon-sc0000011-1510915933:953554..953627TCONS_00001616-exon-sc0000011-1510915933:953554..953627Clytia hemisphaericaexon
TCONS_00001616-exon-sc0000011-1575043694:953554..953627TCONS_00001616-exon-sc0000011-1575043694:953554..953627Clytia hemisphaericaexon
TCONS_00001616-exon-sc0000011-1491911889:953956..954090TCONS_00001616-exon-sc0000011-1491911889:953956..954090Clytia hemisphaericaexon
TCONS_00001616-exon-sc0000011-1510915933:953956..954090TCONS_00001616-exon-sc0000011-1510915933:953956..954090Clytia hemisphaericaexon
TCONS_00001616-exon-sc0000011-1575043694:953956..954090TCONS_00001616-exon-sc0000011-1575043694:953956..954090Clytia hemisphaericaexon
TCONS_00001616-exon-sc0000011-1491911889:954267..954885TCONS_00001616-exon-sc0000011-1491911889:954267..954885Clytia hemisphaericaexon
TCONS_00001616-exon-sc0000011-1510915933:954267..954885TCONS_00001616-exon-sc0000011-1510915933:954267..954885Clytia hemisphaericaexon
TCONS_00001616-exon-sc0000011-1575043694:954267..954885TCONS_00001616-exon-sc0000011-1575043694:954267..954885Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000011supercontigsc0000011:943350..954885 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.36818 1.29456 3.8958 5.38703 7.56292 6.55375 7.454 7.19031 4.06381 5.34476 3.73299 2.49 1.92797 1.87123 1.99224 1.93986 3.89478 3.40834 0.5904 0.994526 1.17876 1.59072 1.19596 1.41208 4.78499 5.33487 0.650113 0.317174 0.962261 1.13358
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00001616 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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