TCONS_00001591 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001591
Unique NameTCONS_00001591
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4394

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001591 ID=TCONS_00001591|Name=TCONS_00001591|organism=Clytia hemisphaerica|type=transcript|length=4394bp
ATAGATATGAAAATAAGATATCAAAATTAAAAGTCCTATTGGTGTTAGCA
AATTAACCGAATGGTGAAATAATGATATTATAGAAGTTACTGGATATCCA
TATTATTATGGTGGCATCTACAGATGATACTCCTGACCTTCTTCGTATTG
GCGAATACGTTAAACAACGTTGGAAGATTGTGAAAAAAGTAGGTGGAGGA
GGTTTTGGTGAAATCTATCAAGGTCATGACACAGTCACTCATGAAATGGT
GGCTCTCAAATTGGAATCAGCCAACACTTCAAAGCAAGTCTTAAAGATGG
AAGTTGCTGTGCTGAAGAAACTTCAAGGGAGAGATCACGTGTGTCAGTTT
GTAGCTTGTGGACGCAACGATAGATTCAATTATGTCGTCATGTCGTTGGT
CGGACAAAACCTAGCGGAATTGCGACGTAGTCAATCTAGGGGTGCATTTT
CTATTGGAACTATGCTGAGATTGGGAGTGCAGATCTTGAATGGAATAGAG
GCTATACATGACTGTGGATTCTTACATCGAGATGTCAAGCCTtcaaattt
tGCAATGGGTAATACGAAACAAACAAATCGGATCGTTTATATGTTGGACT
TTGGTCTTGCCAGGCAATACATCAACAATGAAGGAAATGTCAGAGCACCT
CGTGCCGTGGCCGGTTTTCGTGGAACTGTCCGTTACGCTGCTATCACAGC
TCATGAAAATAAAGAAATGGCACGTCGTGACGATTTATGGTCTGTGTTTT
ACATGCTTGTTGAATTTGCTCAAGGAAGCCTTCCCTGGAGAAAATACAAA
GATAAGgaAGAGGTTGGGAAATTCAAGAAAGCATACGAACATAAACAACT
GTTGAAACACATGCCTGCAGAATTCAAAGAGTTTCTTGATCATATCAAAG
CATTGGAATACGCTGATAAGCCTGATTACGATTTCTTACGCCAATGTTGC
GAGAATGCACTCATGAAACGTGGTATCCGCCAAACAGATCCGTTCGATTG
GGAAAAATCTACAGTAGATGGCTCCCTTACCACAACCACATCCAGCACTT
CCAAATACATCGCTACTCCACAAGCTCTCAAACCTGACAACGCGCTCAAT
AATCCGTCCGACTTGCCGCGCTCGAATACCGTTCTAGCTGCAGGGGAGTT
TAGTTTACAGTATGATGAAGAGGACCAGCAGCAAGGACCGATTAATGTTC
AAGTGCCTGAAGGACGACAGCCcgaagtcattaataaaaagGAAGCATCA
TCGACTCCGGTGAAACTACCGAAAGCTTTCCTTCAAGCCATGAAAGAAAA
TATGTTAGCCGACGCTCGAACTAAAGATTTCAAACCGTCTGCTGCTAATC
ACGacaagaaaaattcaaagataCCTGTTTTAAAGGGGAAGTTAGCTACA
AAATCACAGAAACAACATGACTCAGGATCTACTAACCATGCTGGGAAAGT
TGCAACTCAACCAACGCCCAAAACAGAGGATTGTCCAAACTTAGAGAAAC
GCATTTCTCCGGagattttgattgaaaatgtcGATCAAAATGGACCGGCT
GAGGGcgtttgtaaacaaactgaagTGGATTCGAAAAACGAAAACAACGT
AGAACACAGTAATGATAGTAAAAGTAAAGAATCGAGCAGTCGAACTAAAA
CTTCAAAAACCGGGAAAATTGATGAGAATAACACCAAAGAAACCaataag
aaaatattgattCAAAAACAATTAGAGGAAGGACCGTTCTTTGTTCCTAC
GAAAACAGAAGATGAGGTTTTCGACCCTGGTAACGAAATGCTGGTTAACT
TACTAGGCAATATtatggaaaataaaaacaagaaactatCTTTAAATCAA
GAAGAAATTGTAGACACTGCAGATAATCCAAATTGTAACGTAAATGAGGA
ACCTGCAAATATTTATAATGAGGAGATTAAAATATCAGCTGATTCTCCAA
AGAGAAGCAACGACGAATCGCTACAACTTAAATTACCGGAAAATTTACCG
AAAAATAGTCAAGTCAATATTGCCGAACAAAATATCCCTGTTAAGGTAAC
CAAGAAAAACGAAATTAATATTTATCATGGCGAGATAAATAAAGAACTAA
ACCATGTAAATGATATACCAGAGGTCAAAGTAAGGACTTCCAATCAAATT
GATGTAGCTGTTGAAAGTAAAGAAAATGTCCAAGATGTTCGGAAAAGGAC
TTCAAATCATAGTGATCACACGGTTGAAAGCAAAATAAAGGATTCTAAGA
TCGAAAACGACAaggacttgaaaacaaaagcaacTATTGAAGTCAAATCA
GATGCGAAACCATCTACCAACATTCACAAGTCCagttctttttcgttttt
gaaCGCAAATCTTCTAGCAAACATAGAAGACCCTATAGAGCCAGAACACG
TGATCGATGCTAATGAAACCAGtattaaacttttgaaattagaACGGAAC
CCCTCATCAGAACATTCGAAAAATTCCTCAGTCTCGAAAAGCAAAGAAGA
AGAAATGGTTGAAAAGCATTCAggagaatctgaagttgaagatCCATCTT
TGGAGAAACCGAAGTTGCTTCCACCAACACCAACTCACAAACAAGACGCA
AAGTCACACTACAATAATGATCAAACTGAAACTGACAATAACGATCTACA
AAAAAGTGATCgattaaagatatttcaaacACCCATAGAAATTGGGAGGA
AAATTGAACCAGCCAAACATCACGAAGAGATTGTTGACCGTGATGAACTT
GAGGAGCGTGACTGTGCACTAGGCACCATTTACAGTGATGATAAACTAAC
TTCTGGTTATTCGTCACATCACGAAAATCACCAAGCAAAGGAAAGCTTCC
ATAATCATCATCAACCCATTGTTTTGGACGCGAAACAAGATAAAAGATAC
TCTACAGACAACCTACCACAACCCTCTTTAGAGATTCGACCAGGTAACCC
TACCCCGAACCTAGACGACAACCTCCCTTCTTACTACCCTAGGAACAACT
CCCTACCCCCTAAGTATCTACCACCCACGCCAAGTAGAGCAGGACCCTCC
AATAGTGTCGCTAAAACCAACAAGACTAATAAAGAAAGTAGGACAGTGTT
TAATGTGCTTTCAAATATAGTCGATGATTTGAAATTTCGTATACAAAACA
AGGCGTTACGAACACGATATGGTAGTAGTTCGGACCTGACAACCACTGTT
GAACGTcgttctaaaaagaaaaagagaatgtATAGAAGTTTATCAATGGA
CTGTTTAGATGCTCCTGGCGGCAATGACATTGGAATCCTTAGATCGTCAT
CAAGTAGCAATCGAATAGCAGGCGGCGCCTCTTCATCTAAGAtgaacaaa
acattcgatttacAATCTAACTACATGGACTCGTGCATAGATACAAAGAA
TCGACGTAAAGCTGAAGTTTTAGCTGAAGATTCTATGGATGAAAATTCTG
AAGGATTTCGTGGTGAACCACATGAGAATAAATACGTTGTTGAGAAAACT
GAAAATATACATTATTTGGAAGATGCTTACACCGGTGAAAATCCTTCGTC
GGGTATAGTACAAGATTCTTTCGAAGAACTTAAAGTTGGACCACGGTTTA
CTGATAAAGAGTATTCCAACGAAAGTCTCGATAGCCCAGAATTCAATACG
AACGAAACAAAGAAAGATAGGCGAGGCAGTAAATCCTCCTTAGCAGAGAC
GTTTATCAAACGGAAAAATTCGGCcagtaatttttttaagaaagataaga
aaaagGACAACTCGCCCGATTATAAGGCGAAAAATGATAAACGACGTTTC
GATGATATTCGCATGAACGCCGACCAATCAGATCGTTCAGAAGAGTCGAG
TAAAGCTGTGGTCCCTCAACCGCCGAGTGGTCGACGCCGTGGTGCCAAGA
TCGAAGGGAGgtTTCGAAGATACAAGATGTATGCTGTCCGAAATCCCAAA
GGAGGTGGAAACTGACAAGTTAAATGAGATTCTaggtatatatttttcaa
tttttagtctTTTTACCTACTGTAATTCTTTTGATGAAATGCCATTATTG
ACAATAGATctatcttatcggagttttctaaaaaagtgatgcattgtggg
gttgtttcgggggtattacaatagaaatacccccgaaacaatcccacaat
gcatagctgttttagaaaaatccaaAACTCCGTAAGGTCTATTAGGCAAA
GCCTTTAAGAAATTTTGCTTACaagaaaatcttaattttcGCCGAATAAG
ATTCCTTATTTTTTACCGTCTTCGATTTTTAATCGGTTTTGATACTCGAT
TTAttttaaaagtagatttttaggaaatactCGAGTTTAtagttttcttg
attttaccaaaagatttttaaaatcctcttgattgatattttta
Run BLAST on NCBI

transcript from alignment at sc0000011:633542..645024+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001591 ID=TCONS_00001591|Name=TCONS_00001591|organism=Clytia hemisphaerica|type=transcript|length=11483bp|location=Sequence derived from alignment at sc0000011:633542..645024+ (Clytia hemisphaerica)
ATAGATATGAAAATAAGATATCAAAATTAAAAGTCCTATTGGTGTTAGCA
AATTAACCGAATGGTGAAATAATGATATTATAGAAGTTACTGGATATCCA
TATTATTATGGTGGCATCTACAGATGATACTCCTGACCTTCTTCGTATTG
GCGAATACGTTAAACAACGTTGGAAGATTGTAAGTCgatattttcatatt
tgtcAAAGAGTTCTTGGCTTAACATTTCAATATTTGTATGAAATCATGTT
AGCAGCTTATCAAACTAATTAGAATAGAATGGCTTCCACAAGAGAAATCA
GAACACAAAAAACCAAATTCAAATACCATTTTAATTGGAATCCTCAAGCT
GCTGGCCCTTCTTAGATGTTTAGGCATCTGtctattaaattttttttctt
ttttaaataaaaatttcttcaaCATGTGTTCTCCAAAAGGGTCACTGCTA
TTTGTCATTGTTGATACTATTTATATGCTTTCTCCCTACTTGTATctcat
ttcactgaagattggcGCAAAAGccccatgaaactctgagtatGAAATAA
GAAGTTAACTCTTAAAATATGATGCCTTCTCCTTACATAGAGATAATGGG
AAAAAGAAGCTTTGATCTCTTTGATCTAATGCTTGATTATAACATGCTTT
GTAGTTGCATAAAGTAGTTTCTTATAAACATTAGGAATCGTATGAAATGT
TTACAGTTATTTCTGCCCCCCTCtaattaaattgtttttattttgtctta
GGTGAAAAAAGTAGGTGGAGGAGGTTTTGGTAAGTTGCAATGTTCTATAG
TCACAAATaggttgaaatatattttttttagaaattttagaaatgcAATC
CTTAGTAAGATTATTCAAATTCTctgatttcattaaaatatgTACCCTTC
TAGAAATGTATAAAATATTGCAAACCTCGTTCTCAAAGCCTTGTTGCTAC
GATACTTCAACTCCGTCAGAAGACAAAATTAATGTTTACAAGCAGTTTTA
TATCTTTTGGGAAAACATATTACATGTGTAATTGTTTGAAGTAATTATTT
CAATTGAAATTGAGCCTCGCAATGCTCTTGATTTATATCGAGAAGTGTGT
ACTGTAAACTGATTTTTGGGATTCATTTTTGTTTcatctcttttttttta
acttaaacTTTTAGGTGAAATCTATCAAGGTCATGACACAGTCACTCATG
AAATGGTGGCTCTCAAATTGGAATCAGCCAACACTTCAAAGCAAGTCTTA
AAGATGGAAGTTGCTGTGCTGAAGAAACTTCAAGGTGTGTATCTCCCAAG
TTAATTAAAGTCTCTCCTCAttaggggccatccatatagtacacATGCAA
GAAAGGGGGGGTGtaaaaaatttggcatttttgttggTACGTGCTATTTG
GATAACCCCTTACGTGATTGTTTTAAAAGCAGAGGTTTGAGAttaaatat
ataaattttttgaatttgtagAATTATTTGGTAAAGAAGATTTTCTAAGG
GCCATATTAAAGATACAGGCAAAATGTAAAACCTGTTTAAAGgtttcatt
ccattttatatccatacatggAAGTTGAAGAACATGTCCTGGGTGGGGGT
TTAAGGAAATTACTTGCATTTTTCCAGGGAGtttgttttaagtttttctt
tcaaagggtTTTGGTGACCAAGAATCTTCTGcctgtattttcttttttcc
agggGCAAAATGATAAGCTCGACTGAGTACAAAGAGTATTTTTTGAATCT
CCGGGGATGTAATTTAAAttacttaaaaagtttttctgaAGCTTCCAAGG
GGGCAAAGATCCATTTAAATGCATCCAAACTCACTTTGTGTTATAAAGAA
GAATTTTCATAAGGGTAATAGAAtccttttttcaagatttttttttgtaa
atttttcctTTTGAAGGGGAAATCCCCTTAATCGAATCGTCCAGCTCTTG
GATGGATACTAAATGGAAGTTCCAATAATATTATCAAGAACTATTTTAAA
CTAATCGTCTGACGAAATTTTCTAACCTGATTTTCATCCCTAGTGATTTT
AATCGGGTTGAAGGTAGTCTAGAGCTAGACTACTAATTAAcatcagtttt
actcaaaagctTCTTTTACAGTAGTAGAAAAAACCTACCTAGAAGTTTGT
TTACTTCTCGAGTGTTTGAATTAGTATTGACACTATTCCAACTTCCCGTA
cggcttttttcttctttttgactttgagGCAGGATTGCTCCAGCTACGTT
TTGTGTTAAAGAATAGTGGTCTGGAAATCGAGACTAGTTTGAAGGAAAAA
ATTCAACTTAACGATCATTAGTACATTAAGTATTGTTATTGATCATTTTT
AGGGAGAGATCACGTGTGTCAGTTTGTAGCTTGTGGACGCAACGATAGAT
TCAATTATGTCGTCATGTCGTTGGTCGGACAAAACCTAGCGGAATTGCGA
CGTAGTCAATCTAGGGGTGCATTTTCTATTGGAACTATGCTGAGATTGGG
AGTGCAGATCTTGAATGGAATAGAGGCTATACATGACTGTGGATTCTTAC
ATCGAGATGTCAAGCCTGTAAGTTGTATTCCTCAAGATAAACACTGTATG
TTTTTATCATCATTTTTGGGGATATAATTGTCCATGTGCAACCATCTAAG
attaaaattttagtttttttaaatctgatgtaTTTTAGGTTTTCACTTTC
GAAACAGTGAGCGTTTTAATTTAGAAGTATGACGCTTATAAGCCTAGCAT
ACCCAGGCTGACATTTTTGGCTTCAACACCttagaacaaaagaaatttaa
gGATATacgtgttttcttttttataagcatacaaaaatgcaaaagctggc
tcggaaatgcttagattgagagatttacaaagctgaaaaatgctttgagG
GATGCTTATAATCCTAAGCAAAACTTTAGAGAAATTTcgaaattccagcc
aaaaacaaacaaaatctaAAAGGAAGCTCAAAGTAATAGCATATGCTTGA
ATTGTTGCTATatatgagcctagatatgcttataagcgcaatgcttatta
aaaaaaacatgtgcCGAGCTTCAGCTCAAAATGAACACTATACTCGAGAA
AAGAACGtttgtaatttttgttgttatgatatcttttctttttttaagtc
aaattttGCAATGGGTAATACGAAACAAACAAATCGGATCGTTTATATGT
TGGACTTTGGTCTTGCCAGGCAATACATCAACAATGAAGGAAATGTCAGA
GCAGTGAGTACTTCCATTCAACCTATcttattcattttgattgttttaac
cctttgagcatcttcattttttaccaAAGATGCCAATTCACATTTTTTAT
TGCACACTCGCAAAAATTCAAGTCAATTGGAAATAGTTCGAAAGTTCtca
acaaattttcttttggaaagaAGGGGATATTAAAGGGTTAATAACTACAA
GGAAGGATGCTGATTGTTTTTCGTTGTTACATTATTTTTGTGGTATTCTT
TATTTCAGCCTCGTGCCGTGGCCGGTTTTCGTGGAACTGTCCGTTACGCT
GCTATCACAGCTCATGAAAATAAAGTAAGAAATTCGGTCCATTTAATTGA
TTTCATTTATTATAACACCAAAATGCAATATTTGTAATGAAAGAACTGTT
GTATAAACATTTCGAGACATGTTAACTGatcaaatttcatcattttgagA
CATTTTTTGAGATCATAAATTCCATTCGCTGTAATGGGCTTTCCGCCTCC
CTTTCCCTTCTTTGGACATAAAGTATGCgtactgaaaatattaaattaat
ATTATCTCGTAACAGTTATCATATCCTGTATTATCATGATTATATACATA
TCGAGTAAGTCCAAATAAAAGTGACGCTTCTACCAGTAAAGATCAACACA
CGTTGGAACCCTCTCccacaaaaatttgcgaaaacgTCATCCCCAGTGGA
CAATAATACTCCAATATTTGTCCCcgataaaaataatcaaataaacaaat
cctcactcgctgcaaaatgtttcactttttcctattcccactgaattttt
ctGACTTCGTTTTGAagtggaattcaaatccccagccataaaaacatgtt
aattaaTCCCCATCCAGTTTCAGTCCGCTTTTTTACCTCGATAGGCTGAA
AGACCGACATAAACTTCAACTTCAGGTTATTTCAGAAATCCAAAAGTCGA
AAAACAATTTgtaaaatgtataaaaattgTCTTGTTTATAGGAAATGGCA
CGTCGTGACGATTTATGGTCTGTGTTTTACATGCTTGTTGAATTTGCTCA
AGGAAGCCTTCCCTGGAGAAAATACAAAGATAAGGTATATCATtgcctct
tttttttttctggcaAGTTTTCGCAAAGAGTTTTTATTAAATGATTTACG
GCGTGTGTAGGTACTGCCAACATACCTAGAAAGTTTGTAGTACGTATTCA
CCCCTCAGTTTTGAACTGTAATAGATAGAAACAAAAAACTCCAAATTTCT
ATATTTTCTCTCAAacgcttttttaaatttcaggaAGAGGTTGGGAAATT
CAAGAAAGCATACGAACATAAACAACTGTTGAAACACATGCCTGCAGAAT
TCAAAGAGTTTCTTGATCATATCAAAGCATTGGAATACGCTGATAAGCCT
GATTACGATGTAAGAACAACACTTTCATTTTCCTGCTCCTTTTCTTCCCA
GATCTTTTAAAAGTAGCTAATATCCATAGCTTGTTCTATCCATAACCTGG
GAGATTTTTGAATACCACTATAGGAAGGAATGCCAGCTCTATTCTCATTT
GTATTCAGTCTTACCGCTAAGTCTATAGATTACTTGGTTACTTAGTTTAC
TTTACAGTTCAATATTCTTCAATTTCATTTATAGGGCTTTTGCAGAAAAA
CTTCGTTcatagggggtggaggatatattattttcctcaatgatctaccc
ctggacattttgatttttcaccccctggacaagcatcaaatcgaccccct
ggacactaaaatttacccctggacattagaaattcaccccatggacatgg
cagtttttcaggattttttcgatacccctggacaatatatcctctaCCCC
CTATGGAAGgctttttctggaagagcccattctatGGTGTCCCGCCAACT
TTCATGTATTTCTGTATGTTAAATTCTCTTCATTGTCCTTTTTAACAGTT
CTTACGCCAATGTTGCGAGAATGCACTCATGAAACGTGGTATCCGCCAAA
CAGATCCGTTCGATTGGGAAAAATCTACAGTAGATGGCTCCCTTACCACA
ACCACATCCAGCACTTCCAAATACATCGCTACTCCACAAGCTCTCAAACC
TGACAACGCGCTCAATAATCCGTCCGACTTGCCGCGCTCGAATACCGTTC
TAGCTGCAGGGGAGTTTAGTTTACAGTATGATGAAGAGGACCAGCAGCAA
GGACCGATTAATGTTCAAGTGCCTGAAGGACGACAGCCcgaagtcattaa
taaaaagGTATGTTCTTTCTacttctttctttcttctttctatcTACTCT
ACTATTTACTGGAAAATTTCACCAGTTGGAGCGAAATTCCTCTTCGTTTC
CTGAATTTCgtctttatttttgttattttattctAGCTTATCACAGTTTT
CTATGAAACAGAGGGCTAAATATATATATAGACTTTCGTGAAcctttgaa
taaaaaatattcatgtaACATGTGTTTTTTCAAGGTTACAATAGCACAcc
gctatgcaaacgtcataattattacttttaacatttgaccgaaattcaat
cttaccatccttttcatcttgattcgtaaTGTGTGCAAGTTACTTTGGTA
TTTAGTCCTGTAGAATTTATAGTCGACCTAGAAAAAATTCAGataaaagg
tttctatataccgttggaaagataattttattaGCTTTCGAATGAGGGGT
ATAGTCACATTTTACACCTTGGGCAAAATAAGTTATTGACAAAATGGTGA
CAGGTggtatttttgctaaattccgaaAATGAGCACTTCAAAGGCTTTTG
AACAGTTCGCTATAAGTCAGGATTGGCTCATGATACAaccttgaaacttt
gcaaaacttCTCTGAGAATGGTAAGGAGTatttagaaaattcaaaattta
aaaaaaaaaatcgaaaaaaatgatgacgtcatcaaaaatgacaatttttg
ttaaaaaaagcatgtttttCGACAAAATATAACTAAAACTGTTTTAATGC
GAAGTAAGTTTATATTAAAATGACCTAATATTTTCTACACATTATCTGCT
AATCATAAAACTGACATAAATTTAGTAAAATTTAGCCATAAACATCATCG
ATGCTTCTCAAAAGATCGATTCTGAGCAAGGTTAGCTTATAACGAGTGAA
TTAGATGGTAGATGTGAAAAGTTAAAGCAAACTCCAACGTGAGACTCGAT
ACGACATTAATTCATTTTAAACTATTCGTAAAATCCTTAATAAAAAACAC
TGACTGGAAGCATGAAAAACATAATTGCAAGAAACCTACTTATGAAGACG
ACATTTCTAATAAAAAGTTGTACTGAGCTAAACAAAAATATCCATAAAGT
TTCTATCTTCAAGATCTACGTCATAAATAGGAACATTGTCCTCATTATCA
TTATCGATTTCGATATTTCTACACGATGTACCAAGACACTCTTTGCAAAA
AGTGGTACATTTCAGACCTGATTTACGACAGGTACAACGATTGCTATCGC
ATCCACTTTTGCAATTGTCAATAAGTGTAATTGAGTTGCAAAAGCAATTA
ATTCAAAGAATGATGGGATTAAAAATCGGACAAAAAGTATTcttgatgtc
tatttttagaatcactgCGGTATGTTATTGGCTCTCGCTAATTTGAAATG
GAAAAATGTAATTTGTTCGAACTACAAAGGGAttcgagtttgaaaaaaaa
ttaatgggTATTATTTCTTTACGGGGATTGAGTAGTTGTTCGGATTTTAA
AGATTCGTCTCgtataaaagaaatttgaattagtGAGAGCATTGTATTAC
TATCTCTTCATATTTTTAATCTAACTTGCATTTTCTGTTCCTTCGCACAG
CAAAATAGTTTCTTAGAGGAGCTTATTACTGAAAGTACTTTCATTGAACT
ATTTTTAGGAAGCATCATCGACTCCGGTGAAACTACCGAAAGCTTTCCTT
CAAGCCATGAAAGAAAATATGTTAGCCGACGCTCGAACTAAAGATTTCAA
ACCGTCTGCTGCTAATCACGacaagaaaaattcaaagataCCTGTTTTAA
AGGGGAAGTTAGCTACAAAATCACAGAAACAACATGACTCAGGATCTACT
AACCATGCTGGGAAAGTTGCAACTCAACCAACGCCCAAAACAGAGGATTG
TCCAAACTTAGAGAAACGCATTTCTCCGGagattttgattgaaaatgtcG
ATCAAAATGGACCGGCTGAGGGcgtttgtaaacaaactgaagTGGATTCG
AAAAACGAAAACAACGTAGAACACAGTAATGATAGTAAAAGTAAAGAATC
GAGCAGTCGAACTAAAACTTCAAAAACCGGGAAAATTGATGAGAATAACA
CCAAAGAAACCaataagaaaatattgattCAAAAACAATTAGAGGAAGGA
CCGTTCTTTGTTCCTACGAAAACAGAAGATGAGGTTTTCGACCCTGGTAA
CGAAATGCTGGTTAACTTACTAGGCAATATtatggaaaataaaaacaaga
aactatCTTTAAATCAAGAAGAAATTGTAGACACTGCAGATAATCCAAAT
TGTAACGTAAATGAGGAACCTGCAAATATTTATAATGAGGAGATTAAAAT
ATCAGCTGATTCTCCAAAGAGAAGCAACGACGAATCGCTACAACTTAAAT
TACCGGAAAATTTACCGAAAAATAGTCAAGTCAATATTGCCGAACAAAAT
ATCCCTGTTAAGGTAACCAAGAAAAACGAAATTAATATTTATCATGGCGA
GATAAATAAAGAACTAAACCATGTAAATGATATACCAGAGGTCAAAGTAA
GGACTTCCAATCAAATTGATGTAGCTGTTGAAAGTAAAGAAAATGTCCAA
GATGTTCGGAAAAGGACTTCAAATCATAGTGATCACACGGTTGAAAGCAA
AATAAAGGATTCTAAGATCGAAAACGACAaggacttgaaaacaaaagcaa
cTATTGAAGTCAAATCAGATGCGAAACCATCTACCAACATTCACAAGTCC
agttctttttcgtttttgaaCGCAAATCTTCTAGCAAACATAGAAGACCC
TATAGAGCCAGAACACGTGATCGATGCTAATGAAACCAGtattaaacttt
tgaaattagaACGGAACCCCTCATCAGAACATTCGAAAAATTCCTCAGTC
TCGAAAAGCAAAGAAGAAGAAATGGTTGAAAAGCATTCAggagaatctga
agttgaagatCCATCTTTGGAGAAACCGAAGTTGCTTCCACCAACACCAA
CTCACAAACAAGACGCAAAGTCACACTACAATAATGATCAAACTGAAACT
GACAATAACGATCTACAAAAAAGTGATCgattaaagatatttcaaacACC
CATAGAAATTGGGAGGAAAATTGAACCAGCCAAACATCACGAAGAGATTG
TTGACCGTGATGAACTTGAGGAGCGTGACTGTGCACTAGGCACCATTTAC
AGTGATGATAAACTAACTTCTGGTTATTCGTCACATCACGAAAATCACCA
AGCAAAGGAAAGCTTCCATAATCATCATCAACCCATTGTTTTGGACGCGA
AACAAGATAAAAGATACTCTACAGACAACCTACCACAACCCTCTTTAGAG
ATTCGACCAGGTAACCCTACCCCGAACCTAGACGACAACCTCCCTTCTTA
CTACCCTAGGAACAACTCCCTACCCCCTAAGTATCTACCACCCACGCCAA
GTAGAGCAGGACCCTCCAATAGTGTCGCTAAAACCAACAAGACTAATAAA
GAAAGTAGGACAGTGTTTAATGTGCTTTCAAATATAGTCGATGATTTGAA
ATTTCGTATACAAAACAAGGCGTTACGAACACGATATGGTAGTAGTTCGG
ACCTGACAACCACTGTTGAACGTcgttctaaaaagaaaaagagaatgtAT
AGAAGTTTATCAATGGACTGTTTAGATGCTCCTGGCGGCAATGACATTGG
AATCCTTAGATCGTCATCAAGTAGCAATCGAATAGCAGGCGGCGCCTCTT
CATCTAAGAtgaacaaaacattcgatttacAATCTAACTACATGGACTCG
TGCATAGATACAAAGAATCGACGTAAAGCTGAAGTTTTAGCTGAAGATTC
TATGGATGAAAATTCTGAAGGATTTCGTGGTGAACCACATGAGAATAAAT
ACGTTGTTGAGAAAACTGAAAATATACATTATTTGGAAGATGCTTACACC
GGTGAAAATCCTTCGTCGGGTATAGTACAAGATTCTTTCGAAGAACTTAA
AGTTGGACCACGGTTTACTGATAAAGAGTATTCCAACGAAAGTCTCGATA
GCCCAGAATTCAATACGAACGAAACAAAGAAAGATAGGCGAGGCAGTAAA
TCCTCCTTAGCAGAGACGTTTATCAAACGGAAAAATTCGGCcagtaattt
ttttaagaaagataagaaaaagGACAACTCGCCCGATTATAAGGCGAAAA
ATGATAAACGACGTTTCGATGATATTCGCATGAACGCCGACCAATCAGAT
CGTTCAGAAGAGTCGAGTAAAGCTGTGGTCCCTCAACCGCCGAGTGGTCG
ACGCCGTGGTGCCAAGATCGAAGGGAGGTAAGTAGATGTTGTTCTCTTTA
TCTATATTTCTACTACCGGTTGACCCAGAAATAAATATAAAGGTTTGATG
GTTTACTTTGTCCATAATAATATgaatttttactctttttgtcaagagga
aaggcaaacttaaaatttgacataaagctttttaaaatttgtaCAGTGGt
tctcaagttataagcttgTGAAGTCGAAATTCgcttttgaaaaagtccaa
aaacacATCAAAAAAGGATATCAAATTAAGCATCGTTTAacatttttcac
taaaataatttattttttttgagaaattattcAGTGTTACTGTTGTCTTA
TTTTTCGTCATAACTTTAGCGAGgataattgataaaaatcaGCTGAGATC
ATTAATTGAGTTGTAAAAGTCATTAGGATATAGTGAAATATGAGGTTTTC
TAAATATAATTGCGTTAATTTGATGgactttttcaaaatcaaacattttt
ctGGGGCACCCGGTAGCAATGATATGACTTGTAGTAGGAAAATTCGGGTG
TATCATCTTGAAATACTTCGAAATAGCATGGACGAAGTGTATAATTCCAA
ATTTCACTCAAAGTAATTGATTATCATTGCTCAAGGTAACCAACTAGCCA
GAcatgcggcccttaagggtgcttttttcaagctttccaaagtgcactgt
aagggtcgaaatgggcaaagatgagaaaaagtgcaCTCCAAGGgtgtgaa
atttgaaaatctgacCAAGTATTTTGccttaaattgctcaaaaattctCA
ACCACCGTAAGCGTCGATCGCCCAAATTAtgtcaaatttggctaaatctt
ctctgcactgtaagggtccgttTTCAAAGGCCAAGCTTTGGACCGCATGC
TCGGTCGTCTTTGAATCGCGTGCTCCCCCCCCGGGTATACTTAAAACCTC
CAAAAGATAAGGTCCCGTAAGATAAATGAATTGAGGCGTGCAAATTTAAA
TGTAAATTCTTACGCAAAACGCTCTTGCCCAGATAATGTTCTTAAAAGac
gtaatttgtaaattttattgataattttgaGTACACCATCTTAAAAATGC
CTCGTTTAGAGTCTAACTActaataaattttctttaaaaaaaaaaaattt
tcatgagtTTATCAATTATTTTACTCTTTAccattaattttattttaagg
tTTCGAAGATACAAGATGTATGCTGTCCGAAATCCCAAAGGAGGTGGAAA
CTGACAAGTTAAATGAGATTCTaggtatatatttttcaatttttagtctT
TTTACCTACTGTAATTCTTTTGATGAAATGCCATTATTGACAATAGATct
atcttatcggagttttctaaaaaagtgatgcattgtggggttgtttcggg
ggtattacaatagaaatacccccgaaacaatcccacaatgcatagctgtt
ttagaaaaatccaaAACTCCGTAAGGTCTATTAGGCAAAGCCTTTAAGAA
ATTTTGCTTACaagaaaatcttaattttcGCCGAATAAGATTCCTTATTT
TTTACCGTCTTCGATTTTTAATCGGTTTTGATACTCGATTTAttttaaaa
gtagatttttaggaaatactCGAGTTTAtagttttcttgattttaccaaa
agatttttaaaatcctcttgattgatattttta
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000830XLOC_000830Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001591-exon-sc0000011-1491911889:633542..633720TCONS_00001591-exon-sc0000011-1491911889:633542..633720Clytia hemisphaericaexon
TCONS_00001591-exon-sc0000011-1510915933:633542..633720TCONS_00001591-exon-sc0000011-1510915933:633542..633720Clytia hemisphaericaexon
TCONS_00001591-exon-sc0000011-1575043694:633542..633720TCONS_00001591-exon-sc0000011-1575043694:633542..633720Clytia hemisphaericaexon
TCONS_00001591-exon-sc0000011-1491911889:634293..634320TCONS_00001591-exon-sc0000011-1491911889:634293..634320Clytia hemisphaericaexon
TCONS_00001591-exon-sc0000011-1510915933:634293..634320TCONS_00001591-exon-sc0000011-1510915933:634293..634320Clytia hemisphaericaexon
TCONS_00001591-exon-sc0000011-1575043694:634293..634320TCONS_00001591-exon-sc0000011-1575043694:634293..634320Clytia hemisphaericaexon
TCONS_00001591-exon-sc0000011-1491911889:634706..634825TCONS_00001591-exon-sc0000011-1491911889:634706..634825Clytia hemisphaericaexon
TCONS_00001591-exon-sc0000011-1510915933:634706..634825TCONS_00001591-exon-sc0000011-1510915933:634706..634825Clytia hemisphaericaexon
TCONS_00001591-exon-sc0000011-1575043694:634706..634825TCONS_00001591-exon-sc0000011-1575043694:634706..634825Clytia hemisphaericaexon
TCONS_00001591-exon-sc0000011-1491911889:635894..636108TCONS_00001591-exon-sc0000011-1491911889:635894..636108Clytia hemisphaericaexon
TCONS_00001591-exon-sc0000011-1510915933:635894..636108TCONS_00001591-exon-sc0000011-1510915933:635894..636108Clytia hemisphaericaexon
TCONS_00001591-exon-sc0000011-1575043694:635894..636108TCONS_00001591-exon-sc0000011-1575043694:635894..636108Clytia hemisphaericaexon
TCONS_00001591-exon-sc0000011-1491911889:636690..636794TCONS_00001591-exon-sc0000011-1491911889:636690..636794Clytia hemisphaericaexon
TCONS_00001591-exon-sc0000011-1510915933:636690..636794TCONS_00001591-exon-sc0000011-1510915933:636690..636794Clytia hemisphaericaexon
TCONS_00001591-exon-sc0000011-1575043694:636690..636794TCONS_00001591-exon-sc0000011-1575043694:636690..636794Clytia hemisphaericaexon
TCONS_00001591-exon-sc0000011-1491911889:637050..637115TCONS_00001591-exon-sc0000011-1491911889:637050..637115Clytia hemisphaericaexon
TCONS_00001591-exon-sc0000011-1510915933:637050..637115TCONS_00001591-exon-sc0000011-1510915933:637050..637115Clytia hemisphaericaexon
TCONS_00001591-exon-sc0000011-1575043694:637050..637115TCONS_00001591-exon-sc0000011-1575043694:637050..637115Clytia hemisphaericaexon
TCONS_00001591-exon-sc0000011-1491911889:637783..637875TCONS_00001591-exon-sc0000011-1491911889:637783..637875Clytia hemisphaericaexon
TCONS_00001591-exon-sc0000011-1510915933:637783..637875TCONS_00001591-exon-sc0000011-1510915933:637783..637875Clytia hemisphaericaexon
TCONS_00001591-exon-sc0000011-1575043694:637783..637875TCONS_00001591-exon-sc0000011-1575043694:637783..637875Clytia hemisphaericaexon
TCONS_00001591-exon-sc0000011-1491911889:638075..638200TCONS_00001591-exon-sc0000011-1491911889:638075..638200Clytia hemisphaericaexon
TCONS_00001591-exon-sc0000011-1510915933:638075..638200TCONS_00001591-exon-sc0000011-1510915933:638075..638200Clytia hemisphaericaexon
TCONS_00001591-exon-sc0000011-1575043694:638075..638200TCONS_00001591-exon-sc0000011-1575043694:638075..638200Clytia hemisphaericaexon
TCONS_00001591-exon-sc0000011-1491911889:638740..639048TCONS_00001591-exon-sc0000011-1491911889:638740..639048Clytia hemisphaericaexon
TCONS_00001591-exon-sc0000011-1510915933:638740..639048TCONS_00001591-exon-sc0000011-1510915933:638740..639048Clytia hemisphaericaexon
TCONS_00001591-exon-sc0000011-1575043694:638740..639048TCONS_00001591-exon-sc0000011-1575043694:638740..639048Clytia hemisphaericaexon
TCONS_00001591-exon-sc0000011-1491911889:640700..643368TCONS_00001591-exon-sc0000011-1491911889:640700..643368Clytia hemisphaericaexon
TCONS_00001591-exon-sc0000011-1510915933:640700..643368TCONS_00001591-exon-sc0000011-1510915933:640700..643368Clytia hemisphaericaexon
TCONS_00001591-exon-sc0000011-1575043694:640700..643368TCONS_00001591-exon-sc0000011-1575043694:640700..643368Clytia hemisphaericaexon
TCONS_00001591-exon-sc0000011-1491911889:644541..645024TCONS_00001591-exon-sc0000011-1491911889:644541..645024Clytia hemisphaericaexon
TCONS_00001591-exon-sc0000011-1510915933:644541..645024TCONS_00001591-exon-sc0000011-1510915933:644541..645024Clytia hemisphaericaexon
TCONS_00001591-exon-sc0000011-1575043694:644541..645024TCONS_00001591-exon-sc0000011-1575043694:644541..645024Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000011supercontigsc0000011:633542..645024 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.05152	1.89309	1.14222	0.779422	16.1124	12.8823	9.93153	10.5554	4.45384	7.14085	5.79496	3.52545	3.35328	3.42019	3.19424	4.51348	5.96368	5.28491	2.64685	3.46931	4.52439	4.38971	2.71187	4.09468	9.71747	10.093	3.70644	2.96652	3.87525	4.27003
Blast
[Close]
BLAST of TCONS_00001591 vs. Swiss-Prot (Human)
Match: TTBK2 (Tau-tubulin kinase 2 OS=Homo sapiens GN=TTBK2 PE=1 SV=2)

HSP 1 Score: 421.779 bits (1083), Expect = 2.450e-124
Identity = 214/335 (63.88%), Postives = 256/335 (76.42%), Query Frame = 3 
Query:  135 DLLRIGEYVKQRWKIVKKVXXXXXXEIYQGHDTVTHEMVALKLESANTSKQVLKMEVAVLKKLQGRDHVCQFVACGRNDRFNYVVMSLVGQNLAELRRSQSRGAFSIGTMLRLGVQILNGIEAIHDCGFLHRDVKPSNFAMGNTKQTNRIVYMLDFGLARQYINNEGNVRAPRAVAGFRGTVRYAAITAHENKEMARRDDLWSVFYMLVEFAQGSLPWRKYKDKEEVGKFKKAYEHKQLLKHMPAEFKEFLDHIKALEYADKPDYDFLRQCCENALMKRGIRQTDPFDWEKXXXXXXXXXXXXXXXKYI---ATPQALKPDNALNNPSDLPRSNT 1130
            D+L +G  VK+RWK+++K+GGGGFGEIY   D +T E VALK+ESA   KQVLKMEVAVLKKLQG+DHVC+F+ CGRNDRFNYVVM L G+NLA+LRRSQSRG F+I T LRLG QIL  IE+IH  GFLHRD+KPSNFAMG    T R  YMLDFGLARQ+ N+ G+VR PRAVAGFRGTVRYA+I AH N+EM R DDLWS+FYMLVEF  G LPWRK KDKE+VG  K+ Y+H+ +LKH+P EF  FLDHI +L+Y  KPDY  L    +N++   G+ ++DPFDWEK+  DGSLTTTT+ST+  +    TP A+   NA   P DL R NT
Sbjct:    9 DILSVGILVKERWKVLRKIGGGGFGEIYDALDMLTRENVALKVESAQQPKQVLKMEVAVLKKLQGKDHVCRFIGCGRNDRFNYVVMQLQGRNLADLRRSQSRGTFTISTTLRLGRQILESIESIHSVGFLHRDIKPSNFAMGRFPSTCRKCYMLDFGLARQFTNSCGDVRPPRAVAGFRGTVRYASINAHRNREMGRHDDLWSLFYMLVEFVVGQLPWRKIKDKEQVGSIKERYDHRLMLKHLPPEFSIFLDHISSLDYFTKPDYQLLTSVFDNSIKTFGVIESDPFDWEKTGNDGSLTTTTTSTTPQLHTRLTPAAIGIANATPIPGDLLRENT 343
The following BLAST results are available for this feature:
BLAST of TCONS_00001591 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TTBK22.450e-12463.88Tau-tubulin kinase 2 OS=Homo sapiens GN=TTBK2 PE=1... [more]
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