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TCONS_00001591 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001591
Unique NameTCONS_00001591
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4394

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001591 ID=TCONS_00001591|Name=TCONS_00001591|organism=Clytia hemisphaerica|type=transcript|length=4394bp
ATAGATATGAAAATAAGATATCAAAATTAAAAGTCCTATTGGTGTTAGCA
AATTAACCGAATGGTGAAATAATGATATTATAGAAGTTACTGGATATCCA
TATTATTATGGTGGCATCTACAGATGATACTCCTGACCTTCTTCGTATTG
GCGAATACGTTAAACAACGTTGGAAGATTGTGAAAAAAGTAGGTGGAGGA
GGTTTTGGTGAAATCTATCAAGGTCATGACACAGTCACTCATGAAATGGT
GGCTCTCAAATTGGAATCAGCCAACACTTCAAAGCAAGTCTTAAAGATGG
AAGTTGCTGTGCTGAAGAAACTTCAAGGGAGAGATCACGTGTGTCAGTTT
GTAGCTTGTGGACGCAACGATAGATTCAATTATGTCGTCATGTCGTTGGT
CGGACAAAACCTAGCGGAATTGCGACGTAGTCAATCTAGGGGTGCATTTT
CTATTGGAACTATGCTGAGATTGGGAGTGCAGATCTTGAATGGAATAGAG
GCTATACATGACTGTGGATTCTTACATCGAGATGTCAAGCCTtcaaattt
tGCAATGGGTAATACGAAACAAACAAATCGGATCGTTTATATGTTGGACT
TTGGTCTTGCCAGGCAATACATCAACAATGAAGGAAATGTCAGAGCACCT
CGTGCCGTGGCCGGTTTTCGTGGAACTGTCCGTTACGCTGCTATCACAGC
TCATGAAAATAAAGAAATGGCACGTCGTGACGATTTATGGTCTGTGTTTT
ACATGCTTGTTGAATTTGCTCAAGGAAGCCTTCCCTGGAGAAAATACAAA
GATAAGgaAGAGGTTGGGAAATTCAAGAAAGCATACGAACATAAACAACT
GTTGAAACACATGCCTGCAGAATTCAAAGAGTTTCTTGATCATATCAAAG
CATTGGAATACGCTGATAAGCCTGATTACGATTTCTTACGCCAATGTTGC
GAGAATGCACTCATGAAACGTGGTATCCGCCAAACAGATCCGTTCGATTG
GGAAAAATCTACAGTAGATGGCTCCCTTACCACAACCACATCCAGCACTT
CCAAATACATCGCTACTCCACAAGCTCTCAAACCTGACAACGCGCTCAAT
AATCCGTCCGACTTGCCGCGCTCGAATACCGTTCTAGCTGCAGGGGAGTT
TAGTTTACAGTATGATGAAGAGGACCAGCAGCAAGGACCGATTAATGTTC
AAGTGCCTGAAGGACGACAGCCcgaagtcattaataaaaagGAAGCATCA
TCGACTCCGGTGAAACTACCGAAAGCTTTCCTTCAAGCCATGAAAGAAAA
TATGTTAGCCGACGCTCGAACTAAAGATTTCAAACCGTCTGCTGCTAATC
ACGacaagaaaaattcaaagataCCTGTTTTAAAGGGGAAGTTAGCTACA
AAATCACAGAAACAACATGACTCAGGATCTACTAACCATGCTGGGAAAGT
TGCAACTCAACCAACGCCCAAAACAGAGGATTGTCCAAACTTAGAGAAAC
GCATTTCTCCGGagattttgattgaaaatgtcGATCAAAATGGACCGGCT
GAGGGcgtttgtaaacaaactgaagTGGATTCGAAAAACGAAAACAACGT
AGAACACAGTAATGATAGTAAAAGTAAAGAATCGAGCAGTCGAACTAAAA
CTTCAAAAACCGGGAAAATTGATGAGAATAACACCAAAGAAACCaataag
aaaatattgattCAAAAACAATTAGAGGAAGGACCGTTCTTTGTTCCTAC
GAAAACAGAAGATGAGGTTTTCGACCCTGGTAACGAAATGCTGGTTAACT
TACTAGGCAATATtatggaaaataaaaacaagaaactatCTTTAAATCAA
GAAGAAATTGTAGACACTGCAGATAATCCAAATTGTAACGTAAATGAGGA
ACCTGCAAATATTTATAATGAGGAGATTAAAATATCAGCTGATTCTCCAA
AGAGAAGCAACGACGAATCGCTACAACTTAAATTACCGGAAAATTTACCG
AAAAATAGTCAAGTCAATATTGCCGAACAAAATATCCCTGTTAAGGTAAC
CAAGAAAAACGAAATTAATATTTATCATGGCGAGATAAATAAAGAACTAA
ACCATGTAAATGATATACCAGAGGTCAAAGTAAGGACTTCCAATCAAATT
GATGTAGCTGTTGAAAGTAAAGAAAATGTCCAAGATGTTCGGAAAAGGAC
TTCAAATCATAGTGATCACACGGTTGAAAGCAAAATAAAGGATTCTAAGA
TCGAAAACGACAaggacttgaaaacaaaagcaacTATTGAAGTCAAATCA
GATGCGAAACCATCTACCAACATTCACAAGTCCagttctttttcgttttt
gaaCGCAAATCTTCTAGCAAACATAGAAGACCCTATAGAGCCAGAACACG
TGATCGATGCTAATGAAACCAGtattaaacttttgaaattagaACGGAAC
CCCTCATCAGAACATTCGAAAAATTCCTCAGTCTCGAAAAGCAAAGAAGA
AGAAATGGTTGAAAAGCATTCAggagaatctgaagttgaagatCCATCTT
TGGAGAAACCGAAGTTGCTTCCACCAACACCAACTCACAAACAAGACGCA
AAGTCACACTACAATAATGATCAAACTGAAACTGACAATAACGATCTACA
AAAAAGTGATCgattaaagatatttcaaacACCCATAGAAATTGGGAGGA
AAATTGAACCAGCCAAACATCACGAAGAGATTGTTGACCGTGATGAACTT
GAGGAGCGTGACTGTGCACTAGGCACCATTTACAGTGATGATAAACTAAC
TTCTGGTTATTCGTCACATCACGAAAATCACCAAGCAAAGGAAAGCTTCC
ATAATCATCATCAACCCATTGTTTTGGACGCGAAACAAGATAAAAGATAC
TCTACAGACAACCTACCACAACCCTCTTTAGAGATTCGACCAGGTAACCC
TACCCCGAACCTAGACGACAACCTCCCTTCTTACTACCCTAGGAACAACT
CCCTACCCCCTAAGTATCTACCACCCACGCCAAGTAGAGCAGGACCCTCC
AATAGTGTCGCTAAAACCAACAAGACTAATAAAGAAAGTAGGACAGTGTT
TAATGTGCTTTCAAATATAGTCGATGATTTGAAATTTCGTATACAAAACA
AGGCGTTACGAACACGATATGGTAGTAGTTCGGACCTGACAACCACTGTT
GAACGTcgttctaaaaagaaaaagagaatgtATAGAAGTTTATCAATGGA
CTGTTTAGATGCTCCTGGCGGCAATGACATTGGAATCCTTAGATCGTCAT
CAAGTAGCAATCGAATAGCAGGCGGCGCCTCTTCATCTAAGAtgaacaaa
acattcgatttacAATCTAACTACATGGACTCGTGCATAGATACAAAGAA
TCGACGTAAAGCTGAAGTTTTAGCTGAAGATTCTATGGATGAAAATTCTG
AAGGATTTCGTGGTGAACCACATGAGAATAAATACGTTGTTGAGAAAACT
GAAAATATACATTATTTGGAAGATGCTTACACCGGTGAAAATCCTTCGTC
GGGTATAGTACAAGATTCTTTCGAAGAACTTAAAGTTGGACCACGGTTTA
CTGATAAAGAGTATTCCAACGAAAGTCTCGATAGCCCAGAATTCAATACG
AACGAAACAAAGAAAGATAGGCGAGGCAGTAAATCCTCCTTAGCAGAGAC
GTTTATCAAACGGAAAAATTCGGCcagtaatttttttaagaaagataaga
aaaagGACAACTCGCCCGATTATAAGGCGAAAAATGATAAACGACGTTTC
GATGATATTCGCATGAACGCCGACCAATCAGATCGTTCAGAAGAGTCGAG
TAAAGCTGTGGTCCCTCAACCGCCGAGTGGTCGACGCCGTGGTGCCAAGA
TCGAAGGGAGgtTTCGAAGATACAAGATGTATGCTGTCCGAAATCCCAAA
GGAGGTGGAAACTGACAAGTTAAATGAGATTCTaggtatatatttttcaa
tttttagtctTTTTACCTACTGTAATTCTTTTGATGAAATGCCATTATTG
ACAATAGATctatcttatcggagttttctaaaaaagtgatgcattgtggg
gttgtttcgggggtattacaatagaaatacccccgaaacaatcccacaat
gcatagctgttttagaaaaatccaaAACTCCGTAAGGTCTATTAGGCAAA
GCCTTTAAGAAATTTTGCTTACaagaaaatcttaattttcGCCGAATAAG
ATTCCTTATTTTTTACCGTCTTCGATTTTTAATCGGTTTTGATACTCGAT
TTAttttaaaagtagatttttaggaaatactCGAGTTTAtagttttcttg
attttaccaaaagatttttaaaatcctcttgattgatattttta
Run BLAST on NCBI

transcript from alignment at sc0000011:633542..645024+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001591 ID=TCONS_00001591|Name=TCONS_00001591|organism=Clytia hemisphaerica|type=transcript|length=11483bp|location=Sequence derived from alignment at sc0000011:633542..645024+ (Clytia hemisphaerica)
ATAGATATGAAAATAAGATATCAAAATTAAAAGTCCTATTGGTGTTAGCA AATTAACCGAATGGTGAAATAATGATATTATAGAAGTTACTGGATATCCA TATTATTATGGTGGCATCTACAGATGATACTCCTGACCTTCTTCGTATTG GCGAATACGTTAAACAACGTTGGAAGATTGTAAGTCgatattttcatatt tgtcAAAGAGTTCTTGGCTTAACATTTCAATATTTGTATGAAATCATGTT AGCAGCTTATCAAACTAATTAGAATAGAATGGCTTCCACAAGAGAAATCA GAACACAAAAAACCAAATTCAAATACCATTTTAATTGGAATCCTCAAGCT GCTGGCCCTTCTTAGATGTTTAGGCATCTGtctattaaattttttttctt ttttaaataaaaatttcttcaaCATGTGTTCTCCAAAAGGGTCACTGCTA TTTGTCATTGTTGATACTATTTATATGCTTTCTCCCTACTTGTATctcat ttcactgaagattggcGCAAAAGccccatgaaactctgagtatGAAATAA GAAGTTAACTCTTAAAATATGATGCCTTCTCCTTACATAGAGATAATGGG AAAAAGAAGCTTTGATCTCTTTGATCTAATGCTTGATTATAACATGCTTT GTAGTTGCATAAAGTAGTTTCTTATAAACATTAGGAATCGTATGAAATGT TTACAGTTATTTCTGCCCCCCTCtaattaaattgtttttattttgtctta GGTGAAAAAAGTAGGTGGAGGAGGTTTTGGTAAGTTGCAATGTTCTATAG TCACAAATaggttgaaatatattttttttagaaattttagaaatgcAATC CTTAGTAAGATTATTCAAATTCTctgatttcattaaaatatgTACCCTTC TAGAAATGTATAAAATATTGCAAACCTCGTTCTCAAAGCCTTGTTGCTAC GATACTTCAACTCCGTCAGAAGACAAAATTAATGTTTACAAGCAGTTTTA TATCTTTTGGGAAAACATATTACATGTGTAATTGTTTGAAGTAATTATTT CAATTGAAATTGAGCCTCGCAATGCTCTTGATTTATATCGAGAAGTGTGT ACTGTAAACTGATTTTTGGGATTCATTTTTGTTTcatctcttttttttta acttaaacTTTTAGGTGAAATCTATCAAGGTCATGACACAGTCACTCATG AAATGGTGGCTCTCAAATTGGAATCAGCCAACACTTCAAAGCAAGTCTTA AAGATGGAAGTTGCTGTGCTGAAGAAACTTCAAGGTGTGTATCTCCCAAG TTAATTAAAGTCTCTCCTCAttaggggccatccatatagtacacATGCAA GAAAGGGGGGGTGtaaaaaatttggcatttttgttggTACGTGCTATTTG GATAACCCCTTACGTGATTGTTTTAAAAGCAGAGGTTTGAGAttaaatat ataaattttttgaatttgtagAATTATTTGGTAAAGAAGATTTTCTAAGG GCCATATTAAAGATACAGGCAAAATGTAAAACCTGTTTAAAGgtttcatt ccattttatatccatacatggAAGTTGAAGAACATGTCCTGGGTGGGGGT TTAAGGAAATTACTTGCATTTTTCCAGGGAGtttgttttaagtttttctt tcaaagggtTTTGGTGACCAAGAATCTTCTGcctgtattttcttttttcc agggGCAAAATGATAAGCTCGACTGAGTACAAAGAGTATTTTTTGAATCT CCGGGGATGTAATTTAAAttacttaaaaagtttttctgaAGCTTCCAAGG GGGCAAAGATCCATTTAAATGCATCCAAACTCACTTTGTGTTATAAAGAA GAATTTTCATAAGGGTAATAGAAtccttttttcaagatttttttttgtaa atttttcctTTTGAAGGGGAAATCCCCTTAATCGAATCGTCCAGCTCTTG GATGGATACTAAATGGAAGTTCCAATAATATTATCAAGAACTATTTTAAA CTAATCGTCTGACGAAATTTTCTAACCTGATTTTCATCCCTAGTGATTTT AATCGGGTTGAAGGTAGTCTAGAGCTAGACTACTAATTAAcatcagtttt actcaaaagctTCTTTTACAGTAGTAGAAAAAACCTACCTAGAAGTTTGT TTACTTCTCGAGTGTTTGAATTAGTATTGACACTATTCCAACTTCCCGTA cggcttttttcttctttttgactttgagGCAGGATTGCTCCAGCTACGTT TTGTGTTAAAGAATAGTGGTCTGGAAATCGAGACTAGTTTGAAGGAAAAA ATTCAACTTAACGATCATTAGTACATTAAGTATTGTTATTGATCATTTTT AGGGAGAGATCACGTGTGTCAGTTTGTAGCTTGTGGACGCAACGATAGAT TCAATTATGTCGTCATGTCGTTGGTCGGACAAAACCTAGCGGAATTGCGA CGTAGTCAATCTAGGGGTGCATTTTCTATTGGAACTATGCTGAGATTGGG AGTGCAGATCTTGAATGGAATAGAGGCTATACATGACTGTGGATTCTTAC ATCGAGATGTCAAGCCTGTAAGTTGTATTCCTCAAGATAAACACTGTATG TTTTTATCATCATTTTTGGGGATATAATTGTCCATGTGCAACCATCTAAG attaaaattttagtttttttaaatctgatgtaTTTTAGGTTTTCACTTTC GAAACAGTGAGCGTTTTAATTTAGAAGTATGACGCTTATAAGCCTAGCAT ACCCAGGCTGACATTTTTGGCTTCAACACCttagaacaaaagaaatttaa gGATATacgtgttttcttttttataagcatacaaaaatgcaaaagctggc tcggaaatgcttagattgagagatttacaaagctgaaaaatgctttgagG GATGCTTATAATCCTAAGCAAAACTTTAGAGAAATTTcgaaattccagcc aaaaacaaacaaaatctaAAAGGAAGCTCAAAGTAATAGCATATGCTTGA ATTGTTGCTATatatgagcctagatatgcttataagcgcaatgcttatta aaaaaaacatgtgcCGAGCTTCAGCTCAAAATGAACACTATACTCGAGAA AAGAACGtttgtaatttttgttgttatgatatcttttctttttttaagtc aaattttGCAATGGGTAATACGAAACAAACAAATCGGATCGTTTATATGT TGGACTTTGGTCTTGCCAGGCAATACATCAACAATGAAGGAAATGTCAGA GCAGTGAGTACTTCCATTCAACCTATcttattcattttgattgttttaac cctttgagcatcttcattttttaccaAAGATGCCAATTCACATTTTTTAT TGCACACTCGCAAAAATTCAAGTCAATTGGAAATAGTTCGAAAGTTCtca acaaattttcttttggaaagaAGGGGATATTAAAGGGTTAATAACTACAA GGAAGGATGCTGATTGTTTTTCGTTGTTACATTATTTTTGTGGTATTCTT TATTTCAGCCTCGTGCCGTGGCCGGTTTTCGTGGAACTGTCCGTTACGCT GCTATCACAGCTCATGAAAATAAAGTAAGAAATTCGGTCCATTTAATTGA TTTCATTTATTATAACACCAAAATGCAATATTTGTAATGAAAGAACTGTT GTATAAACATTTCGAGACATGTTAACTGatcaaatttcatcattttgagA CATTTTTTGAGATCATAAATTCCATTCGCTGTAATGGGCTTTCCGCCTCC CTTTCCCTTCTTTGGACATAAAGTATGCgtactgaaaatattaaattaat ATTATCTCGTAACAGTTATCATATCCTGTATTATCATGATTATATACATA TCGAGTAAGTCCAAATAAAAGTGACGCTTCTACCAGTAAAGATCAACACA CGTTGGAACCCTCTCccacaaaaatttgcgaaaacgTCATCCCCAGTGGA CAATAATACTCCAATATTTGTCCCcgataaaaataatcaaataaacaaat cctcactcgctgcaaaatgtttcactttttcctattcccactgaattttt ctGACTTCGTTTTGAagtggaattcaaatccccagccataaaaacatgtt aattaaTCCCCATCCAGTTTCAGTCCGCTTTTTTACCTCGATAGGCTGAA AGACCGACATAAACTTCAACTTCAGGTTATTTCAGAAATCCAAAAGTCGA AAAACAATTTgtaaaatgtataaaaattgTCTTGTTTATAGGAAATGGCA CGTCGTGACGATTTATGGTCTGTGTTTTACATGCTTGTTGAATTTGCTCA AGGAAGCCTTCCCTGGAGAAAATACAAAGATAAGGTATATCATtgcctct tttttttttctggcaAGTTTTCGCAAAGAGTTTTTATTAAATGATTTACG GCGTGTGTAGGTACTGCCAACATACCTAGAAAGTTTGTAGTACGTATTCA CCCCTCAGTTTTGAACTGTAATAGATAGAAACAAAAAACTCCAAATTTCT ATATTTTCTCTCAAacgcttttttaaatttcaggaAGAGGTTGGGAAATT CAAGAAAGCATACGAACATAAACAACTGTTGAAACACATGCCTGCAGAAT TCAAAGAGTTTCTTGATCATATCAAAGCATTGGAATACGCTGATAAGCCT GATTACGATGTAAGAACAACACTTTCATTTTCCTGCTCCTTTTCTTCCCA GATCTTTTAAAAGTAGCTAATATCCATAGCTTGTTCTATCCATAACCTGG GAGATTTTTGAATACCACTATAGGAAGGAATGCCAGCTCTATTCTCATTT GTATTCAGTCTTACCGCTAAGTCTATAGATTACTTGGTTACTTAGTTTAC TTTACAGTTCAATATTCTTCAATTTCATTTATAGGGCTTTTGCAGAAAAA CTTCGTTcatagggggtggaggatatattattttcctcaatgatctaccc ctggacattttgatttttcaccccctggacaagcatcaaatcgaccccct ggacactaaaatttacccctggacattagaaattcaccccatggacatgg cagtttttcaggattttttcgatacccctggacaatatatcctctaCCCC CTATGGAAGgctttttctggaagagcccattctatGGTGTCCCGCCAACT TTCATGTATTTCTGTATGTTAAATTCTCTTCATTGTCCTTTTTAACAGTT CTTACGCCAATGTTGCGAGAATGCACTCATGAAACGTGGTATCCGCCAAA CAGATCCGTTCGATTGGGAAAAATCTACAGTAGATGGCTCCCTTACCACA ACCACATCCAGCACTTCCAAATACATCGCTACTCCACAAGCTCTCAAACC TGACAACGCGCTCAATAATCCGTCCGACTTGCCGCGCTCGAATACCGTTC TAGCTGCAGGGGAGTTTAGTTTACAGTATGATGAAGAGGACCAGCAGCAA GGACCGATTAATGTTCAAGTGCCTGAAGGACGACAGCCcgaagtcattaa taaaaagGTATGTTCTTTCTacttctttctttcttctttctatcTACTCT ACTATTTACTGGAAAATTTCACCAGTTGGAGCGAAATTCCTCTTCGTTTC CTGAATTTCgtctttatttttgttattttattctAGCTTATCACAGTTTT CTATGAAACAGAGGGCTAAATATATATATAGACTTTCGTGAAcctttgaa taaaaaatattcatgtaACATGTGTTTTTTCAAGGTTACAATAGCACAcc gctatgcaaacgtcataattattacttttaacatttgaccgaaattcaat cttaccatccttttcatcttgattcgtaaTGTGTGCAAGTTACTTTGGTA TTTAGTCCTGTAGAATTTATAGTCGACCTAGAAAAAATTCAGataaaagg tttctatataccgttggaaagataattttattaGCTTTCGAATGAGGGGT ATAGTCACATTTTACACCTTGGGCAAAATAAGTTATTGACAAAATGGTGA CAGGTggtatttttgctaaattccgaaAATGAGCACTTCAAAGGCTTTTG AACAGTTCGCTATAAGTCAGGATTGGCTCATGATACAaccttgaaacttt gcaaaacttCTCTGAGAATGGTAAGGAGTatttagaaaattcaaaattta aaaaaaaaaatcgaaaaaaatgatgacgtcatcaaaaatgacaatttttg ttaaaaaaagcatgtttttCGACAAAATATAACTAAAACTGTTTTAATGC GAAGTAAGTTTATATTAAAATGACCTAATATTTTCTACACATTATCTGCT AATCATAAAACTGACATAAATTTAGTAAAATTTAGCCATAAACATCATCG ATGCTTCTCAAAAGATCGATTCTGAGCAAGGTTAGCTTATAACGAGTGAA TTAGATGGTAGATGTGAAAAGTTAAAGCAAACTCCAACGTGAGACTCGAT ACGACATTAATTCATTTTAAACTATTCGTAAAATCCTTAATAAAAAACAC TGACTGGAAGCATGAAAAACATAATTGCAAGAAACCTACTTATGAAGACG ACATTTCTAATAAAAAGTTGTACTGAGCTAAACAAAAATATCCATAAAGT TTCTATCTTCAAGATCTACGTCATAAATAGGAACATTGTCCTCATTATCA TTATCGATTTCGATATTTCTACACGATGTACCAAGACACTCTTTGCAAAA AGTGGTACATTTCAGACCTGATTTACGACAGGTACAACGATTGCTATCGC ATCCACTTTTGCAATTGTCAATAAGTGTAATTGAGTTGCAAAAGCAATTA ATTCAAAGAATGATGGGATTAAAAATCGGACAAAAAGTATTcttgatgtc tatttttagaatcactgCGGTATGTTATTGGCTCTCGCTAATTTGAAATG GAAAAATGTAATTTGTTCGAACTACAAAGGGAttcgagtttgaaaaaaaa ttaatgggTATTATTTCTTTACGGGGATTGAGTAGTTGTTCGGATTTTAA AGATTCGTCTCgtataaaagaaatttgaattagtGAGAGCATTGTATTAC TATCTCTTCATATTTTTAATCTAACTTGCATTTTCTGTTCCTTCGCACAG CAAAATAGTTTCTTAGAGGAGCTTATTACTGAAAGTACTTTCATTGAACT ATTTTTAGGAAGCATCATCGACTCCGGTGAAACTACCGAAAGCTTTCCTT CAAGCCATGAAAGAAAATATGTTAGCCGACGCTCGAACTAAAGATTTCAA ACCGTCTGCTGCTAATCACGacaagaaaaattcaaagataCCTGTTTTAA AGGGGAAGTTAGCTACAAAATCACAGAAACAACATGACTCAGGATCTACT AACCATGCTGGGAAAGTTGCAACTCAACCAACGCCCAAAACAGAGGATTG TCCAAACTTAGAGAAACGCATTTCTCCGGagattttgattgaaaatgtcG ATCAAAATGGACCGGCTGAGGGcgtttgtaaacaaactgaagTGGATTCG AAAAACGAAAACAACGTAGAACACAGTAATGATAGTAAAAGTAAAGAATC GAGCAGTCGAACTAAAACTTCAAAAACCGGGAAAATTGATGAGAATAACA CCAAAGAAACCaataagaaaatattgattCAAAAACAATTAGAGGAAGGA CCGTTCTTTGTTCCTACGAAAACAGAAGATGAGGTTTTCGACCCTGGTAA CGAAATGCTGGTTAACTTACTAGGCAATATtatggaaaataaaaacaaga aactatCTTTAAATCAAGAAGAAATTGTAGACACTGCAGATAATCCAAAT TGTAACGTAAATGAGGAACCTGCAAATATTTATAATGAGGAGATTAAAAT ATCAGCTGATTCTCCAAAGAGAAGCAACGACGAATCGCTACAACTTAAAT TACCGGAAAATTTACCGAAAAATAGTCAAGTCAATATTGCCGAACAAAAT ATCCCTGTTAAGGTAACCAAGAAAAACGAAATTAATATTTATCATGGCGA GATAAATAAAGAACTAAACCATGTAAATGATATACCAGAGGTCAAAGTAA GGACTTCCAATCAAATTGATGTAGCTGTTGAAAGTAAAGAAAATGTCCAA GATGTTCGGAAAAGGACTTCAAATCATAGTGATCACACGGTTGAAAGCAA AATAAAGGATTCTAAGATCGAAAACGACAaggacttgaaaacaaaagcaa cTATTGAAGTCAAATCAGATGCGAAACCATCTACCAACATTCACAAGTCC agttctttttcgtttttgaaCGCAAATCTTCTAGCAAACATAGAAGACCC TATAGAGCCAGAACACGTGATCGATGCTAATGAAACCAGtattaaacttt tgaaattagaACGGAACCCCTCATCAGAACATTCGAAAAATTCCTCAGTC TCGAAAAGCAAAGAAGAAGAAATGGTTGAAAAGCATTCAggagaatctga agttgaagatCCATCTTTGGAGAAACCGAAGTTGCTTCCACCAACACCAA CTCACAAACAAGACGCAAAGTCACACTACAATAATGATCAAACTGAAACT GACAATAACGATCTACAAAAAAGTGATCgattaaagatatttcaaacACC CATAGAAATTGGGAGGAAAATTGAACCAGCCAAACATCACGAAGAGATTG TTGACCGTGATGAACTTGAGGAGCGTGACTGTGCACTAGGCACCATTTAC AGTGATGATAAACTAACTTCTGGTTATTCGTCACATCACGAAAATCACCA AGCAAAGGAAAGCTTCCATAATCATCATCAACCCATTGTTTTGGACGCGA AACAAGATAAAAGATACTCTACAGACAACCTACCACAACCCTCTTTAGAG ATTCGACCAGGTAACCCTACCCCGAACCTAGACGACAACCTCCCTTCTTA CTACCCTAGGAACAACTCCCTACCCCCTAAGTATCTACCACCCACGCCAA GTAGAGCAGGACCCTCCAATAGTGTCGCTAAAACCAACAAGACTAATAAA GAAAGTAGGACAGTGTTTAATGTGCTTTCAAATATAGTCGATGATTTGAA ATTTCGTATACAAAACAAGGCGTTACGAACACGATATGGTAGTAGTTCGG ACCTGACAACCACTGTTGAACGTcgttctaaaaagaaaaagagaatgtAT AGAAGTTTATCAATGGACTGTTTAGATGCTCCTGGCGGCAATGACATTGG AATCCTTAGATCGTCATCAAGTAGCAATCGAATAGCAGGCGGCGCCTCTT CATCTAAGAtgaacaaaacattcgatttacAATCTAACTACATGGACTCG TGCATAGATACAAAGAATCGACGTAAAGCTGAAGTTTTAGCTGAAGATTC TATGGATGAAAATTCTGAAGGATTTCGTGGTGAACCACATGAGAATAAAT ACGTTGTTGAGAAAACTGAAAATATACATTATTTGGAAGATGCTTACACC GGTGAAAATCCTTCGTCGGGTATAGTACAAGATTCTTTCGAAGAACTTAA AGTTGGACCACGGTTTACTGATAAAGAGTATTCCAACGAAAGTCTCGATA GCCCAGAATTCAATACGAACGAAACAAAGAAAGATAGGCGAGGCAGTAAA TCCTCCTTAGCAGAGACGTTTATCAAACGGAAAAATTCGGCcagtaattt ttttaagaaagataagaaaaagGACAACTCGCCCGATTATAAGGCGAAAA ATGATAAACGACGTTTCGATGATATTCGCATGAACGCCGACCAATCAGAT CGTTCAGAAGAGTCGAGTAAAGCTGTGGTCCCTCAACCGCCGAGTGGTCG ACGCCGTGGTGCCAAGATCGAAGGGAGGTAAGTAGATGTTGTTCTCTTTA TCTATATTTCTACTACCGGTTGACCCAGAAATAAATATAAAGGTTTGATG GTTTACTTTGTCCATAATAATATgaatttttactctttttgtcaagagga aaggcaaacttaaaatttgacataaagctttttaaaatttgtaCAGTGGt tctcaagttataagcttgTGAAGTCGAAATTCgcttttgaaaaagtccaa aaacacATCAAAAAAGGATATCAAATTAAGCATCGTTTAacatttttcac taaaataatttattttttttgagaaattattcAGTGTTACTGTTGTCTTA TTTTTCGTCATAACTTTAGCGAGgataattgataaaaatcaGCTGAGATC ATTAATTGAGTTGTAAAAGTCATTAGGATATAGTGAAATATGAGGTTTTC TAAATATAATTGCGTTAATTTGATGgactttttcaaaatcaaacattttt ctGGGGCACCCGGTAGCAATGATATGACTTGTAGTAGGAAAATTCGGGTG TATCATCTTGAAATACTTCGAAATAGCATGGACGAAGTGTATAATTCCAA ATTTCACTCAAAGTAATTGATTATCATTGCTCAAGGTAACCAACTAGCCA GAcatgcggcccttaagggtgcttttttcaagctttccaaagtgcactgt aagggtcgaaatgggcaaagatgagaaaaagtgcaCTCCAAGGgtgtgaa atttgaaaatctgacCAAGTATTTTGccttaaattgctcaaaaattctCA ACCACCGTAAGCGTCGATCGCCCAAATTAtgtcaaatttggctaaatctt ctctgcactgtaagggtccgttTTCAAAGGCCAAGCTTTGGACCGCATGC TCGGTCGTCTTTGAATCGCGTGCTCCCCCCCCGGGTATACTTAAAACCTC CAAAAGATAAGGTCCCGTAAGATAAATGAATTGAGGCGTGCAAATTTAAA TGTAAATTCTTACGCAAAACGCTCTTGCCCAGATAATGTTCTTAAAAGac gtaatttgtaaattttattgataattttgaGTACACCATCTTAAAAATGC CTCGTTTAGAGTCTAACTActaataaattttctttaaaaaaaaaaaattt tcatgagtTTATCAATTATTTTACTCTTTAccattaattttattttaagg tTTCGAAGATACAAGATGTATGCTGTCCGAAATCCCAAAGGAGGTGGAAA CTGACAAGTTAAATGAGATTCTaggtatatatttttcaatttttagtctT TTTACCTACTGTAATTCTTTTGATGAAATGCCATTATTGACAATAGATct atcttatcggagttttctaaaaaagtgatgcattgtggggttgtttcggg ggtattacaatagaaatacccccgaaacaatcccacaatgcatagctgtt ttagaaaaatccaaAACTCCGTAAGGTCTATTAGGCAAAGCCTTTAAGAA ATTTTGCTTACaagaaaatcttaattttcGCCGAATAAGATTCCTTATTT TTTACCGTCTTCGATTTTTAATCGGTTTTGATACTCGATTTAttttaaaa gtagatttttaggaaatactCGAGTTTAtagttttcttgattttaccaaa agatttttaaaatcctcttgattgatattttta
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000830XLOC_000830Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001591-exon-sc0000011-1491911889:633542..633720TCONS_00001591-exon-sc0000011-1491911889:633542..633720Clytia hemisphaericaexon
TCONS_00001591-exon-sc0000011-1510915933:633542..633720TCONS_00001591-exon-sc0000011-1510915933:633542..633720Clytia hemisphaericaexon
TCONS_00001591-exon-sc0000011-1575043694:633542..633720TCONS_00001591-exon-sc0000011-1575043694:633542..633720Clytia hemisphaericaexon
TCONS_00001591-exon-sc0000011-1491911889:634293..634320TCONS_00001591-exon-sc0000011-1491911889:634293..634320Clytia hemisphaericaexon
TCONS_00001591-exon-sc0000011-1510915933:634293..634320TCONS_00001591-exon-sc0000011-1510915933:634293..634320Clytia hemisphaericaexon
TCONS_00001591-exon-sc0000011-1575043694:634293..634320TCONS_00001591-exon-sc0000011-1575043694:634293..634320Clytia hemisphaericaexon
TCONS_00001591-exon-sc0000011-1491911889:634706..634825TCONS_00001591-exon-sc0000011-1491911889:634706..634825Clytia hemisphaericaexon
TCONS_00001591-exon-sc0000011-1510915933:634706..634825TCONS_00001591-exon-sc0000011-1510915933:634706..634825Clytia hemisphaericaexon
TCONS_00001591-exon-sc0000011-1575043694:634706..634825TCONS_00001591-exon-sc0000011-1575043694:634706..634825Clytia hemisphaericaexon
TCONS_00001591-exon-sc0000011-1491911889:635894..636108TCONS_00001591-exon-sc0000011-1491911889:635894..636108Clytia hemisphaericaexon
TCONS_00001591-exon-sc0000011-1510915933:635894..636108TCONS_00001591-exon-sc0000011-1510915933:635894..636108Clytia hemisphaericaexon
TCONS_00001591-exon-sc0000011-1575043694:635894..636108TCONS_00001591-exon-sc0000011-1575043694:635894..636108Clytia hemisphaericaexon
TCONS_00001591-exon-sc0000011-1491911889:636690..636794TCONS_00001591-exon-sc0000011-1491911889:636690..636794Clytia hemisphaericaexon
TCONS_00001591-exon-sc0000011-1510915933:636690..636794TCONS_00001591-exon-sc0000011-1510915933:636690..636794Clytia hemisphaericaexon
TCONS_00001591-exon-sc0000011-1575043694:636690..636794TCONS_00001591-exon-sc0000011-1575043694:636690..636794Clytia hemisphaericaexon
TCONS_00001591-exon-sc0000011-1491911889:637050..637115TCONS_00001591-exon-sc0000011-1491911889:637050..637115Clytia hemisphaericaexon
TCONS_00001591-exon-sc0000011-1510915933:637050..637115TCONS_00001591-exon-sc0000011-1510915933:637050..637115Clytia hemisphaericaexon
TCONS_00001591-exon-sc0000011-1575043694:637050..637115TCONS_00001591-exon-sc0000011-1575043694:637050..637115Clytia hemisphaericaexon
TCONS_00001591-exon-sc0000011-1491911889:637783..637875TCONS_00001591-exon-sc0000011-1491911889:637783..637875Clytia hemisphaericaexon
TCONS_00001591-exon-sc0000011-1510915933:637783..637875TCONS_00001591-exon-sc0000011-1510915933:637783..637875Clytia hemisphaericaexon
TCONS_00001591-exon-sc0000011-1575043694:637783..637875TCONS_00001591-exon-sc0000011-1575043694:637783..637875Clytia hemisphaericaexon
TCONS_00001591-exon-sc0000011-1491911889:638075..638200TCONS_00001591-exon-sc0000011-1491911889:638075..638200Clytia hemisphaericaexon
TCONS_00001591-exon-sc0000011-1510915933:638075..638200TCONS_00001591-exon-sc0000011-1510915933:638075..638200Clytia hemisphaericaexon
TCONS_00001591-exon-sc0000011-1575043694:638075..638200TCONS_00001591-exon-sc0000011-1575043694:638075..638200Clytia hemisphaericaexon
TCONS_00001591-exon-sc0000011-1491911889:638740..639048TCONS_00001591-exon-sc0000011-1491911889:638740..639048Clytia hemisphaericaexon
TCONS_00001591-exon-sc0000011-1510915933:638740..639048TCONS_00001591-exon-sc0000011-1510915933:638740..639048Clytia hemisphaericaexon
TCONS_00001591-exon-sc0000011-1575043694:638740..639048TCONS_00001591-exon-sc0000011-1575043694:638740..639048Clytia hemisphaericaexon
TCONS_00001591-exon-sc0000011-1491911889:640700..643368TCONS_00001591-exon-sc0000011-1491911889:640700..643368Clytia hemisphaericaexon
TCONS_00001591-exon-sc0000011-1510915933:640700..643368TCONS_00001591-exon-sc0000011-1510915933:640700..643368Clytia hemisphaericaexon
TCONS_00001591-exon-sc0000011-1575043694:640700..643368TCONS_00001591-exon-sc0000011-1575043694:640700..643368Clytia hemisphaericaexon
TCONS_00001591-exon-sc0000011-1491911889:644541..645024TCONS_00001591-exon-sc0000011-1491911889:644541..645024Clytia hemisphaericaexon
TCONS_00001591-exon-sc0000011-1510915933:644541..645024TCONS_00001591-exon-sc0000011-1510915933:644541..645024Clytia hemisphaericaexon
TCONS_00001591-exon-sc0000011-1575043694:644541..645024TCONS_00001591-exon-sc0000011-1575043694:644541..645024Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000011supercontigsc0000011:633542..645024 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.05152 1.89309 1.14222 0.779422 16.1124 12.8823 9.93153 10.5554 4.45384 7.14085 5.79496 3.52545 3.35328 3.42019 3.19424 4.51348 5.96368 5.28491 2.64685 3.46931 4.52439 4.38971 2.71187 4.09468 9.71747 10.093 3.70644 2.96652 3.87525 4.27003
Blast
BLAST of TCONS_00001591 vs. Swiss-Prot (Human)
Match: TTBK2 (Tau-tubulin kinase 2 OS=Homo sapiens GN=TTBK2 PE=1 SV=2)

HSP 1 Score: 421.779 bits (1083), Expect = 2.450e-124
Identity = 214/335 (63.88%), Postives = 256/335 (76.42%), Query Frame = 3
Query:  135 DLLRIGEYVKQRWKIVKKVXXXXXXEIYQGHDTVTHEMVALKLESANTSKQVLKMEVAVLKKLQGRDHVCQFVACGRNDRFNYVVMSLVGQNLAELRRSQSRGAFSIGTMLRLGVQILNGIEAIHDCGFLHRDVKPSNFAMGNTKQTNRIVYMLDFGLARQYINNEGNVRAPRAVAGFRGTVRYAAITAHENKEMARRDDLWSVFYMLVEFAQGSLPWRKYKDKEEVGKFKKAYEHKQLLKHMPAEFKEFLDHIKALEYADKPDYDFLRQCCENALMKRGIRQTDPFDWEKXXXXXXXXXXXXXXXKYI---ATPQALKPDNALNNPSDLPRSNT 1130
            D+L +G  VK+RWK+++K+GGGGFGEIY   D +T E VALK+ESA   KQVLKMEVAVLKKLQG+DHVC+F+ CGRNDRFNYVVM L G+NLA+LRRSQSRG F+I T LRLG QIL  IE+IH  GFLHRD+KPSNFAMG    T R  YMLDFGLARQ+ N+ G+VR PRAVAGFRGTVRYA+I AH N+EM R DDLWS+FYMLVEF  G LPWRK KDKE+VG  K+ Y+H+ +LKH+P EF  FLDHI +L+Y  KPDY  L    +N++   G+ ++DPFDWEK+  DGSLTTTT+ST+  +    TP A+   NA   P DL R NT
Sbjct:    9 DILSVGILVKERWKVLRKIGGGGFGEIYDALDMLTRENVALKVESAQQPKQVLKMEVAVLKKLQGKDHVCRFIGCGRNDRFNYVVMQLQGRNLADLRRSQSRGTFTISTTLRLGRQILESIESIHSVGFLHRDIKPSNFAMGRFPSTCRKCYMLDFGLARQFTNSCGDVRPPRAVAGFRGTVRYASINAHRNREMGRHDDLWSLFYMLVEFVVGQLPWRKIKDKEQVGSIKERYDHRLMLKHLPPEFSIFLDHISSLDYFTKPDYQLLTSVFDNSIKTFGVIESDPFDWEKTGNDGSLTTTTTSTTPQLHTRLTPAAIGIANATPIPGDLLRENT 343          
The following BLAST results are available for this feature:
BLAST of TCONS_00001591 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TTBK22.450e-12463.88Tau-tubulin kinase 2 OS=Homo sapiens GN=TTBK2 PE=1... [more]
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