TCONS_00001584 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001584
Unique NameTCONS_00001584
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length160

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001584 ID=TCONS_00001584|Name=TCONS_00001584|organism=Clytia hemisphaerica|type=transcript|length=160bp
CTGATTTCGAGTTGATAGCAACGAAATTGTATCCACGTCCTCTTGGTGCG
AGATTGGTGGCGAATTGGTTGTTCAAGTTGATTCTGGCAACTCCACATGT
TCCTGAAGGGATGCCAGGATCTTCACAGCCTTGTGAAAAGACACGATAAC
TGATTCCACC
Run BLAST on NCBI

transcript from alignment at sc0000011:346422..346636+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001584 ID=TCONS_00001584|Name=TCONS_00001584|organism=Clytia hemisphaerica|type=transcript|length=215bp|location=Sequence derived from alignment at sc0000011:346422..346636+ (Clytia hemisphaerica)
CTGATTTCGAGTTGATAGCAACGAAATTGTATCCACGTCCTCTTGGTGCG
AGATTGGTGGCGAATTGGTTGTTCAAGTTGATTCTGGCAACTCCACATGT
CCCTGAAGGGATGCCAGGATCTTCACAGCCTTGTGAAAAGACNAACTCCA
CATGTTCCTGAAGGGATGCCAGGATCTTCACAGCCTTGTGAAAAGACACG
ATAACTGATTCCACC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000827XLOC_000827Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001584-exon-sc0000011-1491911889:346422..346517TCONS_00001584-exon-sc0000011-1491911889:346422..346517Clytia hemisphaericaexon
TCONS_00001584-exon-sc0000011-1510915933:346422..346517TCONS_00001584-exon-sc0000011-1510915933:346422..346517Clytia hemisphaericaexon
TCONS_00001584-exon-sc0000011-1575043694:346422..346517TCONS_00001584-exon-sc0000011-1575043694:346422..346517Clytia hemisphaericaexon
TCONS_00001584-exon-sc0000011-1491911889:346573..346636TCONS_00001584-exon-sc0000011-1491911889:346573..346636Clytia hemisphaericaexon
TCONS_00001584-exon-sc0000011-1510915933:346573..346636TCONS_00001584-exon-sc0000011-1510915933:346573..346636Clytia hemisphaericaexon
TCONS_00001584-exon-sc0000011-1575043694:346573..346636TCONS_00001584-exon-sc0000011-1575043694:346573..346636Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000011supercontigsc0000011:346422..346636 +
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00001584 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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