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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00001549 ID=TCONS_00001549|Name=TCONS_00001549|organism=Clytia hemisphaerica|type=transcript|length=678bp TACATACAGTATATATCAATCGGCTCCCCAATCAGCCTTCAAATGAGTTG GCCCCACTTGTCTTAACTTTGTGTTTAACACACTCATGGCTCTTATAATG TCGATGCACATTCGACAACACACTGTTTCCCTCGTTATGTTTGCTCAATT TGATCTCTCGCTGACAATTCAAGCACTGGAAGTGTTTTATTCCATCCTCT GTCTCAGTGATTGAATAAATCTCTTTGTATCCATTTTTCTGCATCCATTT ATCAAGTCTATGAACAATCATTTCTATCGTTTCTTCGGTTTGTTTCCTTC TCTTTGGAGTGGAGGCTGTGCCCGAGAGTTCTTTCCTCTTCCCTTTATTG ACGTTGATTGCGTCAGCTCTTTTTCTAAGTAAGAGTTTCTCACATTCTTC TAAGAAAGTAGTAAATATCGTTTCATGGCCTGGCAAAACTTGAACTTTCT CTGGACATTGTTCAAACATCCCAAACATCTTTTCTCTATCGTCTACTTGG TCTATCATGTCCACCGCGAACTGAAACATTTCTCGTCTTTTATCTTTATC TCTTAATTCTAGAATGGCATTTAAATCGTTGAAACCGGCAAATTTCATTA TCTCGAAAACATACTGTCCCCGTTCGGGTAATATTCGCCATAACTTTTCT GGAACAGCAATTTTGTTACATTTAGCTA Run BLAST on NCBI protein sequence of TCONS_00001549-protein >TCONS_00001549-protein ID=TCONS_00001549-protein|Name=TCONS_00001549-protein|organism=Clytia hemisphaerica|type=polypeptide|length=214bp
AKCNKIAVPEKLWRILPERGQYVFEIMKFAGFNDLNAILELRDKDKRREM FQFAVDMIDQVDDREKMFGMFEQCPEKVQVLPGHETIFTTFLEECEKLLL RKRADAINVNKGKRKELSGTASTPKRRKQTEETIEMIVHRLDKWMQKNGY KEIYSITETEDGIKHFQCLNCQREIKLSKHNEGNSVLSNVHRHYKSHECV KHKVKTSGANSFEG Run BLAST on NCBI transcript from alignment at sc0000010:987842..988519 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00001549 ID=TCONS_00001549|Name=TCONS_00001549|organism=Clytia hemisphaerica|type=transcript|length=678bp|location=Sequence derived from alignment at sc0000010:987842..988519 (Clytia hemisphaerica) TAGCTAAATGTAACAAAATTGCTGTTCCAGAAAAGTTATGGCGAATATTA
CCCGAACGGGGACAGTATGTTTTCGAGATAATGAAATTTGCCGGTTTCAA
CGATTTAAATGCCATTCTAGAATTAAGAGATAAAGATAAAAGACGAGAAA
TGTTTCAGTTCGCGGTGGACATGATAGACCAAGTAGACGATAGAGAAAAG
ATGTTTGGGATGTTTGAACAATGTCCAGAGAAAGTTCAAGTTTTGCCAGG
CCATGAAACGATATTTACTACTTTCTTAGAAGAATGTGAGAAACTCTTAC
TTAGAAAAAGAGCTGACGCAATCAACGTCAATAAAGGGAAGAGGAAAGAA
CTCTCGGGCACAGCCTCCACTCCAAAGAGAAGGAAACAAACCGAAGAAAC
GATAGAAATGATTGTTCATAGACTTGATAAATGGATGCAGAAAAATGGAT
ACAAAGAGATTTATTCAATCACTGAGACAGAGGATGGAATAAAACACTTC
CAGTGCTTGAATTGTCAGCGAGAGATCAAATTGAGCAAACATAACGAGGG
AAACAGTGTGTTGTCGAATGTGCATCGACATTATAAGAGCCATGAGTGTG
TTAAACACAAAGTTAAGACAAGTGGGGCCAACTCATTTGAAGGCTGATTG
GGGAGCCGATTGATATATACTGTATGTA Coding sequence (CDS) from alignment at sc0000010:987842..988519 >TCONS_00001549 ID=TCONS_00001549|Name=TCONS_00001549|organism=Clytia hemisphaerica|type=CDS|length=645bp|location=Sequence derived from alignment at sc0000010:987842..988519 (Clytia hemisphaerica) GCTAAATGTAACAAAATTGCTGTTCCAGAAAAGTTATGGCGAATATTACC CGAACGGGGACAGTATGTTTTCGAGATAATGAAATTTGCCGGTTTCAACG ATTTAAATGCCATTCTAGAATTAAGAGATAAAGATAAAAGACGAGAAATG TTTCAGTTCGCGGTGGACATGATAGACCAAGTAGACGATAGAGAAAAGAT GTTTGGGATGTTTGAACAATGTCCAGAGAAAGTTCAAGTTTTGCCAGGCC ATGAAACGATATTTACTACTTTCTTAGAAGAATGTGAGAAACTCTTACTT AGAAAAAGAGCTGACGCAATCAACGTCAATAAAGGGAAGAGGAAAGAACT CTCGGGCACAGCCTCCACTCCAAAGAGAAGGAAACAAACCGAAGAAACGA TAGAAATGATTGTTCATAGACTTGATAAATGGATGCAGAAAAATGGATAC AAAGAGATTTATTCAATCACTGAGACAGAGGATGGAATAAAACACTTCCA GTGCTTGAATTGTCAGCGAGAGATCAAATTGAGCAAACATAACGAGGGAA ACAGTGTGTTGTCGAATGTGCATCGACATTATAAGAGCCATGAGTGTGTT AAACACAAAGTTAAGACAAGTGGGGCCAACTCATTTGAAGGCTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00001549-exon-sc0000010-1491911889:987842..988519 | TCONS_00001549-exon-sc0000010-1491911889:987842..988519 | Clytia hemisphaerica | exon |
TCONS_00001549-exon-sc0000010-1510915933:987842..988519 | TCONS_00001549-exon-sc0000010-1510915933:987842..988519 | Clytia hemisphaerica | exon |
TCONS_00001549-exon-sc0000010-1575043694:987842..988519 | TCONS_00001549-exon-sc0000010-1575043694:987842..988519 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
sc0000010 | supercontig | sc0000010:987842..988519 . |
Blast
The following BLAST results are available for this feature:
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