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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00001547 ID=TCONS_00001547|Name=TCONS_00001547|organism=Clytia hemisphaerica|type=transcript|length=1616bp
agTTTTTGTCTCTTCCCTTTCCATTTGTGTTgtttttcgtttcttttcac
tttttgtttgactgttattttttgtttacttttctttATAGATTTGTTTT
AGTGAAACTTCtcttttcaaattgttttttatatCTCTCttcgtttgttt
tattttttgtgttgtTCTGTTATTTTTATTTACGTTGATTGCTTGCTTGT
TTGTTTGTATAAACTTCTCTTTGCCCCTTCCCTTTGTTCTTCTGtggttc
tttttctttgttttttttttcgttgaaTTGTTGTTTtcgttcattttcct
tgagtgtTTTTTGTGAAACTACCCTTTGTCTGTTCCTTTTCTtgagtgtt
tttcttttctcgTTCGTTTTTGATTTTCGTTGAGCTGAcgttttctttta
cttttcttgaCAACTTTTCCCTTTGTGAAACTTTTCTTTTGCTTTgcttt
tgtgttgttttttcgTTCGTTTTCATTTTTCGTTTACTTTTCtcgacttt
tttctttttgtgaaaCTTCTCTTTGTCTTTTTCCTTtgcttttgtgtttt
tttttctcgttcGTTTTCAATTTTCGTTTACTTTTCTCGACTGTTTTCCT
TTTGTGAAACTTCTCTTTTGCTTtgcttttgtgttttttttttcgttcgt
tttcattttttgtttacttttcctAACTGTTTTCTTTTTGTGAAACTTCT
CTTTTGCTATacttttgtgttgtttttttcgTTCGTTTTCATTTTTCGTT
TACTTTTCtcgacttttttctttttgtgaaaCTTCTCTTTGTCTTTTTCC
TTTGCTTTTgtgttcttttttttctcgttcCTTTTCAATTTTCGTTTACT
TTTCTCGACTGTTTTCCTTTTGTGAAACTTCTCTTTTGCTTtgcttttgt
gtttttttttcgttcgttttcattttttgtttacttttcctAACTGTTTT
CTTTTTGTGAAACTTCTCTTTTGctttgcttttgttttttttctcgttcG
TTTTCAATTTTCGTTTACTTTTCTCGACTTATTTCTTCAtgtgaaacttt
tttttgtctttttcttttgcttttgtgttgttttttttctcattcgtttt
tattttttgttgaattgtTGTTTTCGTTAATTTTTCTTGACTGTTTTCTT
TTAATGAAACTTCTCTTTtgcttttgtgtttttttctcgtttgttttcat
ttttcgtttacttttcttgactttttgtGAACATCTCTTTTGTCTTTTGT
CTCTTGCTTTTCGAATTTTTCGTTGAACTGTTACTGCTGTTTActtattt
tttggttttgtaAACTTGTCTTTGTCTCTTCCTTTCAGTTTTTTGTGTCC
CCtcgtttgatttttgtttttcgtTTACTCCCTGTTTACTTTGTAGTTTT
CTTTGTACAACTTGTTCTTGTTATTCTATCTATCCTGTATTTAACTTTCA
ATTTCTTGTGTTTTCCACGTTTTTCCTTTTCCTGGTCTATTTTGCCCACC
TcttccaatgaaaaaaaatcataaatttctcAACTTATCAGAACTTATAG
ttcatttattttgtttttcattttgtttaattgttattttaatttttcga
tATAGTAACTCAAAAT Run BLAST on NCBI transcript from alignment at sc0000010:963533..965148 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00001547 ID=TCONS_00001547|Name=TCONS_00001547|organism=Clytia hemisphaerica|type=transcript|length=1616bp|location=Sequence derived from alignment at sc0000010:963533..965148 (Clytia hemisphaerica)
ATTTTGAGTTACTATatcgaaaaattaaaataacaattaaacaaaatgaa
aaacaaaataaatgaaCTATAAGTTCTGATAAGTTgagaaatttatgatt
ttttttcattggaagAGGTGGGCAAAATAGACCAGGAAAAGGAAAAACGT
GGAAAACACAAGAAATTGAAAGTTAAATACAGGATAGATAGAATAACAAG
AACAAGTTGTACAAAGAAAACTACAAAGTAAACAGGGAGTAAacgaaaaa
caaaaatcaaacgaGGGGACACAAAAAACTGAAAGGAAGAGACAAAGACA
AGTTtacaaaaccaaaaaataagTAAACAGCAGTAACAGTTCAACGAAAA
ATTCGAAAAGCAAGAGACAAAAGACAAAAGAGATGTTCacaaaaagtcaa
gaaaagtaaacgaaaaatgaaaacaaacgagaaaaaaacacaaaagcaAA
AGAGAAGTTTCATTAAAAGAAAACAGTCAAGAAAAATTAACGAAAACAac
aattcaacaaaaaataaaaacgaatgagaaaaaaaacaacacaaaagcaa
aagaaaaagacaaaaaaaagtttcacaTGAAGAAATAAGTCGAGAAAAGT
AAACGAAAATTGAAAACgaacgagaaaaaaaacaaaagcaaagCAAAAGA
GAAGTTTCACAAAAAGAAAACAGTTaggaaaagtaaacaaaaaatgaaaa
cgaacgaaaaaaaaacacaaaagcaAAGCAAAAGAGAAGTTTCACAAAAG
GAAAACAGTCGAGAAAAGTAAACGAAAATTGAAAAGgaacgagaaaaaaa
agaacacAAAAGCAAAGGAAAAAGACAAAGAGAAGtttcacaaaaagaaa
aaagtcgaGAAAAGTAAACGAAAAATGAAAACGAAcgaaaaaaacaacac
aaaagtATAGCAAAAGAGAAGTTTCACAAAAAGAAAACAGTTaggaaaag
taaacaaaaaatgaaaacgaacgaaaaaaaaaacacaaaagcaAAGCAAA
AGAGAAGTTTCACAAAAGGAAAACAGTCGAGAAAAGTAAACGAAAATTGA
AAACgaacgagaaaaaaaaacacaaaagcaAAGGAAAAAGACAAAGAGAA
GtttcacaaaaagaaaaaagtcgaGAAAAGTAAACGAAAAATGAAAACGA
AcgaaaaaacaacacaaaagcAAAGCAAAAGAAAAGTTTCACAAAGGGAA
AAGTTGtcaagaaaagtaaaagaaaacgTCAGCTCAACGAAAATCAAAAA
CGAAcgagaaaagaaaaacactcaAGAAAAGGAACAGACAAAGGGTAGTT
TCACAAAAAacactcaaggaaaatgaacgaAAACAACAAttcaacgaaaa
aaaaaacaaagaaaaagaaccaCAGAAGAACAAAGGGAAGGGGCAAAGAG
AAGTTTATACAAACAAACAAGCAAGCAATCAACGTAAATAAAAATAACAG
AacaacacaaaaaataaaacaaacgaaGAGAGatataaaaaacaatttga
aaagaGAAGTTTCACTAAAACAAATCTATaaagaaaagtaaacaaaaaat
aacagtcaaacaaaaagtgaaaagaaacgaaaaacAACACAAATGGAAAG
GGAAGAGACAAAAAct
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00001547-exon-sc0000010-1491911889:963533..965148 | TCONS_00001547-exon-sc0000010-1491911889:963533..965148 | Clytia hemisphaerica | exon |
| TCONS_00001547-exon-sc0000010-1510915933:963533..965148 | TCONS_00001547-exon-sc0000010-1510915933:963533..965148 | Clytia hemisphaerica | exon |
| TCONS_00001547-exon-sc0000010-1575043694:963533..965148 | TCONS_00001547-exon-sc0000010-1575043694:963533..965148 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000010 | supercontig | sc0000010:963533..965148 . |
Blast
The following BLAST results are available for this feature:
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