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TCONS_00001508 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001508
Unique NameTCONS_00001508
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1715

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001508 ID=TCONS_00001508|Name=TCONS_00001508|organism=Clytia hemisphaerica|type=transcript|length=1715bp
GGCCAGTATTCAATTAGCTAATAGACTGTATGGTATTATTGGCATTAAAT
TAATTAACGTAATGAGTCTTTTGTATTATGTAAGAGGAAATGGATTAAAA
CGAAACAGAATTACTTTATTATATTTGTTTTCACCAGCCAGAAGTCGAAA
GAAGAATCGCTGTCTGCGTTTAATACTGTATCACTTCACATTTTTTTGGA
TAACTGTTTCAACTGAGATATTATActgaaattttgatgttcaaatttta
atttttttttgcattgagTGATATTGGGGTATTTACCGAAAACGGAATTT
TGTGCTGTCAAAGATGTCAACTCAATTTTCATTCACAagttttcttcaag
ttcttcTATTGTTAAAAATTCAAGGTCCGCAAACTTCAGATGCGTACAGG
ACAGCTCGATGTATAGAGGAAGTTTGTTCGAGCACGCTAAAATGCGATGT
TGCATTTTCATACAAGCCAAGTTTGAAGGGTCACAGATATTGCATTGGCG
ATGATAAATATATACAATGCCGTGATTGTCGCCTGGAAGAAGAAACTATA
TCAGTGAGTGTGCACATTAGTGGTATACAAGATCACACCAAATTACAGGG
ATATTCCAGGACGCTCTTGCAATTTGTTAATCAGTGGTGTCCGAAAATTG
GATGCAatgttttatatttcaaaaatgttccaaaactTTCTAGatttAAT
TTCTTCACATACCCTGGTGTATGGGACATGGCGACAACAACTCTAATAGC
AGATAACATTCATACAAAACTTTATTTCATCAAATATATCGGTGGTCGGC
CTATCGGGGCCGTAGACCCAATCGACATTGCTCGTCTCTTATCCACAGAA
ATCTTACGAAAAACATTGTTACAGCGATACGGTGTTACCATAAAAACAGA
CATCATAGATATAAACTACAAACGTATTATAGACGCTGAGATCAACAAAG
ACTTAACTATAATAGACGATAAGAATCTTGAAACCGGGGAAGATGATGAA
AAAACAAATGAGAAGGATAATAGCTTTTCATCAGAAAGTTCATTAAAAGC
AAGGattatgattttgattttatttggcGTCCTCCTTGTCACAGTCTTCA
TCAGTATCGTATTGTTCAGAGCGAAGCCAAGGTGTTTACGCCACTTTCAT
ACATTACAACGTACGTCAAGTACACAAGACGTTATTCAAGACACGGCAAA
CAACGATTTAGATAACCAACCCTCTTCATCAACTAATCAAAATGGAGTCG
ATGGCTTCCTGGAACCACCGCCTTATTCAGAAGATGATAGATACAGAAAA
GATAATCCTCCGCCCAAATACGATGAACTTTTTATGGAGGAAAACCGACA
TACTACAACTGCAGAGCTATAATGGATTTATTCTGACTTTTATAATACTG
CAGTATCATTTGTGGTTCTTGCATTTTTGGGGCCTTATAGAAAGATAATA
CGTTTTTCATTGGAAAAAATGTGAGAACTTGATCGGACATAGAATGCATT
TCTAGTTGAATTTTTATCAAGCTGGGGAGTTCCCAGAAGATCAAAAATAT
TAGTTCCtcttggacccaacacccctattttggtacacaggtagtaaaaa
tcaaaatcgattttggacccaacaccccaattatagtacacaggcagtac
atgacaaatttttttctcaaacacccacccactCCAGGATACATGCCACC
TTCTGGTACACTGCC
Run BLAST on NCBI

protein sequence of TCONS_00001508-protein

>TCONS_00001508-protein ID=TCONS_00001508-protein|Name=TCONS_00001508-protein|organism=Clytia hemisphaerica|type=polypeptide|length=352bp
MSTQFSFTSFLQVLLLLKIQGPQTSDAYRTARCIEEVCSSTLKCDVAFSY
KPSLKGHRYCIGDDKYIQCRDCRLEEETISVSVHISGIQDHTKLQGYSRT
LLQFVNQWCPKIGCNVLYFKNVPKLSRFNFFTYPGVWDMATTTLIADNIH
TKLYFIKYIGGRPIGAVDPIDIARLLSTEILRKTLLQRYGVTIKTDIIDI
NYKRIIDAEINKDLTIIDDKNLETGEDDEKTNEKDNSFSSESSLKARIMI
LILFGVLLVTVFISIVLFRAKPRCLRHFHTLQRTSSTQDVIQDTANNDLD
NQPSSSTNQNGVDGFLEPPPYSEDDRYRKDNPPPKYDELFMEENRHTTTA
EL
Run BLAST on NCBI

transcript from alignment at sc0000010:923849..933491-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001508 ID=TCONS_00001508|Name=TCONS_00001508|organism=Clytia hemisphaerica|type=transcript|length=9643bp|location=Sequence derived from alignment at sc0000010:923849..933491- (Clytia hemisphaerica)
GGCCAGTATTCAATTAGCTAATAGACTGTATGGTATTATTGGCATTAAAT TAATTAACGTAATGAGTCTTTTGTATTATGTAAGAGGAAATGGATTAAAA CGAAACAGAATTACTTTATTATATTTGTTTTCACCAGCCAGAAGTCGAAA GAAGAATCGCTGTCTGCGTTTAATACTGTATCACTTCACATTTTTTTGGA TAACTGTTTCAACTGAGATATTATACTGAAATTTTGATGTTCAAATTTTA ATTTTTTTTTGCATTGAGTGATATTGGGGTATTTACCGAAAACGGAATTT TGTGCTGTCAAAGATGTCAACTCAATTTTCATTCACAAGTTTTCTTCAAG TTCTTCTATTGTTAAAAATTCAAGGTAAGAAGCAAAAATTGGATCGAGTG TCGTTAAAATGCTCCNCAAATTCAAGGTAAGAAAAAAAAATTGAATCGAG TGTCGTTAAAATGCTCCTGACTCAATGTCGGTGTAAATGTTAGTAAGTAG TATCTTTAAAACACAGCCAAACAAATTCTGTTATTATTTCACTGGTCAAA CTTTCTTAAAAAAAACGCATCTTTCTTAAGTTGTTTTGATTTTTGTAAGT GAGGACAGCGCTAATTTTGAATTCCCAACTGTAATTTTTTTAAGGCAGAG ATTTCTAGGGTCGATTTAGCTCTTTTTCGGCCCGTTTTAAACCAATTGTA GACAGGAGACCCGTCCTGTATTTTTATAAACTGATGTATACAGGGCGGGT CTCCTGTCTACAATTGGTTTAAAACGGACCGAAAAAGAGCTAAATCGACC CTACTTTTACAGATTGCGATGCCTTTTAAACCACTTTCCAAATATCTTAA CCACTTCACTTTTTATAAAATGTTTCTTTTAAATTTATGAGAAGGATTGT TTGAATTGGCACGTTTGAATATATCTTTCCAACTACAAAAACTTTTTTAG TATTCAAGAGGCAAAGTTTAGATCATGCCGTATTTGCAGAAGCCAACAAA ATGACCTTTTTAACGGTCGTAACCCTTCGAACAAAATATGTAGGAGATAA ATTCAATCAAAAATAATTGTAATTTTCTAACTTTAATTATTTTCGAAAGC ATGACTTTTGATTTCATTACAATCTTACTTGAAATTTCAAATTTCCAAAT TTTGTCATATTTTTTACAGCATCATCAAATAGAGGAAAGTTAAGATTTAA AGCAAGCTTAAAATCACCGAAAAGTACATCATAAAAAGTAATATTTTTCG TTATGAAGGCAAATACTTTAGACAAATTAGAGTTTAGTTTTTAGAGTTGA AAAGACGTTGGCAGCTTCCGTTCGAGCTAAAATTTCAATAAACTAACACA ATTTGGCATCCTAATATTATAAGCATAATGGTACTACTCACTTCCTTATT TCTGCCATAGTTATCTTGCAAATTTTCTACAATTAAGTTTAATGAAAACA AAACTAATTTGCTAGAAAGTACACAATTTACTGGTTTAATTGACCACGCT GAGCAATATCGTGTATTTTGGCAAGATGACTAAGTTTATGCGTAATTTCG TGAACTTCGATTTTTTTTTGTTATAAGCGGCAAATGAACTAATCAATAGG GTTATTTAGGTCTAAGATGCATAATTCTTGCTCACACCGTCAAAGGTAAT GTATTCTTTGCTCACTAAGCGATTTTTTCGTCACTTTTGTCCAACGACTT TTCCGCTAATAAGGTATATTAGGTCTAAAGTAGCCTGGAAATCCAATCTA TTTAACGATTTCACCAAAAATCAAATCAGACGTTTCTCATTGAGAGTAGG GTATTTATGACACGCTGAATTTTCTTGAATTGTTTTAAATTTCATGCAAA GAATTTCGGTTGCTAAAGATGGCCAACTGTTAATGATGGCGAAATTTTGA GCAGAGGGAGGGGGTGTTACAACGTGATTAGTGCTATATAAGTGACAAAT TAAAGCTTGCACTTTTAGCTGTTTAGAAACCAAGATAATTACATTTTATT GATCTCATAAAAATATAATTCGATGCAGATGAGTCGTGTGTTAAAGGTTC ATTTGTTGATCAGGTTATTACAGCTCAATCGGGTGATTATTGATGCTTGA AAAGCATATACAGTGTTCTATTCATAGAAATTTGCTTAAATAATGATAAA AATAGAATTCGATTCCAGGCTTTTTTCGGACACACTGTAAAGACACGTTT TCTTTGCCAAAATAAGAAAATTAGCGGAAAATTTTAGTATCTTAATATAA AAAATTCAATGTTTATTACTGCAATCTATTCTACTAGCCTCAACCCCTTG ATTGAAGTATACAACCTCGCTAAACTTGCTGACCCGTAAAACGGCCCTTG GTATTGCTCCTTTGAATTTGATACGTCGCATTTAAAAATTAGACATCTAT GAAGTAACTGATGTACTCTTTCACGTAGAGCCATTATAAATGTAGGCGCG CGGAAATGTAGGTCTGTCGGCTTGAGCTCTTGACAATGTACATGTTTCGG TGTTTGAAAACAAATGCTATTTGTTTCGGTGTTAGACAAGCCAAGTTTTT AATTTTATGTTCATTTAATAAAAATGTTTCGTTATTTCAGTGTTGGTCTC GCACACCCTAAGTAAAATACCGGATGAATATCTTTTTTGAAATTAAACTA TCAGACTGTTTACCAATCCCCCTTTAATTTATAACGCTGATATTTATGTC CTTTTGGAAACCTGACAAACCAGTGACAGGAACTATTTATCATTGTCTTT TATCTCCTTTCTTTGAAAGGTGATGTAACAACGAAAACCTTTCGAATAAC TCGAAAAAAAGGCTCGAAAATAAATCATATGTTAAATTCGAAATAAACAA GCTACATGCTGAATGGACCTACCTGAAGAATGATGTAATATGACAATTGA AAAATGAGAAGAATAGTATGAAAATGCAGAATAATAACGAGAACAACTCG AGAAATTCATGGAATCCGGCGATTCTCGGCTGTTTTGGCGATTTTTAGAA AGTTCCTGTACCAAAATCAGTTTCATTAAAAATTGAACCATGCTTAATCG TGGACATTCTTATAAATCATGTTTTTGTTTGAAAAAAACAAAGACATGAA ACGAAAAAATCCAATGAAAATCTGCAAAAACTGAAATTTCCGGCTTTTTT GGCCGGAAAAAACATTTTCTCAAAAATCGAACTCGGTCATGTTTTGAGCA TTGCGAATACGCATCATTCTGCAGAATGCATTCTGCATTCAGAGAAAAAT AAGGATGAAAATTCGAGAAAATGTCAAAAAAGACCGGTTTTTCCGGCATA TTTCTGGCATTTTCGGCCGGAAAAAAATGTTTTAAGGAAATTATAAGGAA AAAGTCCAATGAAAATCCAGAAAAACGGCGATTTTCGGCATATTTTCTCA AAAATTTTCTCAAAAATCGGACTCGGCCATGTTTTGGACATTGTTAATAC GCATCTTTGTGCAAAAAATCAGAAAATACTAATGATAAAATCTCGAGAAA ATGCCAAAAAAACAGTTTTTCCGAAATATTTCCGGCATTTTCGGCCGGAA AAAAATGTTTTTCGAAAATCTAGCTCCGTCACATTTTAGGTATTGTCATT TTGCATCAGTGTGCAAAATTTCATAAAAAAATATGAAGTACAGCTCGAGA AATTCAAGAAATACTGTCTTTCCAGCAAAAATAGGTTGTTCCGGCAATTT TTGAATAGTTTCGGCTTCAAAAATCTATTTTATTGAAAATTGAAACATGC TTGATGGTGAGCATTGCTATTAATAATGTTTTTGAATGAAAAAACAACCA ATTGTAAGGAAAAAGTCCAATGAAAATCCAGAAAAACGGCAATTTCCGGC ATATTTCCGGCATTTTCGGCCGGAAAAGNNGTTAATACGCATCTTTGAGC AAAAAATCAGAAAAAACTAATGATAAAATCTCGAGAAAGTGCCAAAAAAA CAGTTTTTCCGGCATATTTCCAGCATTTTTGGCCGGATAAATATTTTTCC CGAAAATCGGGCTCCGTCACATTTTGAGCATTACCATTTTGCATCATTGT GCAAAAAATCAGAAAAAACTAACGAGCCAATCCCGAGAAAAGCTGGCAAC AGACGAACGAACGGACGGACGAACGGACATGGGTTAATTTAAAGGACCTC CACCGGGGTACCCGGAGGTAGTTCCAATAAAGCGAGCTCGAAATAAATAG GAATTAGCGGCTTCCTTTGAGAATGAGCATTAAATATCAAAGCTTTTGTG CACTGTGCAATAGTGGCTATCGAACATCATTTTCATCATTTTTTTAATTT TCACTTGCAATCGCAAAGCCCTAATGAACAGTGCGATAGTTGGTGGAAAC CACCCTTTAAAGAATAATGCCAATTATGATGCGAAACTCAGAAAAACTTC AAAAAATTAATCGGAAGACAATTCGGACAAAAAGTAACTCTGGAATTCCA GGCCTCTGTTAGTACCGTAGCCTCCAAAGGGTATGCCAAGAAATTCAGTG GGTTAACGAAAATAATAATTTAATAACTTTATTTACTTACAGGTCCGCAA ACTTCAGATGCGTACAGGACAGGTATGAAATGTTATATTTTCTACCCGCC AGTAATGGGTGCCTGCATGGAAATATTGTTGGTAACGTTAATAACTTCTT CCAAAATTTTTGGATTCTGCAATATTCTAAAAAATCAAAACAAAAAGCAA CGTGGTTGGTCCATCTGATCCCATTAAGTTTGAAGCCCCCAAGGAGCTAG CGAGGAATCTTCAACCTTTCTCAAGCAAGAAAAAGTGAAGCCTTAATTTT GCCCCGCACTTAGAAGTTGTGTTTGAAAAACACGCGGGTCACATATCCTG GATAGATCGTTCATATCTAGAGAGAAGAGATTGGACAGGAATGTAGAGGC ATAAAACGTAGTCTTTTTTGCATTCAATCCAAAAATTATTTTATTTTCTA TCTCAGCTCGATGTATAGAGGAAGTTTGTTCGAGCACGCTAAAATGCGAT GTTGCATTTTCATACAAGCCAAGTTTGAAGGGTCACAGATATTGCATTGG CGATGATAAATATATACAATGCCGTGATTGTCGCCTGGAAGAAGGTACGT TGCTCAATCATGTACACGTACACGTTTTTAATTAAAAAAAATTCGTTAAG AACATATAACGCTTAATAGCCAAAATATTAAGAACAAATTAAGAACATTT TAAAGCTTTACGGACTTTAAAAGATTGTAGAAAAATACTCACAAAATGGT GAAAATAAGAACATTTTAAGAATATTTTTAGGGTTAATCCTTAAAAAGTT AAGAAAATCTGAAGGTTACTAAAATTTGGAGTATTCTTATAGAAAAACCT GTATTTGTTATATTTTTCTCACCACTCTTTAACTCATATGTTTACCTCTT ATTTCTTAGAAACTATATCAGTGAGTGTGCACATTAGTGGTATACAAGAT CACACCAAATTACAGGTTGGTAATACCCTTCAAATAGATTTCCATCTTAA AATTCTTATCCGTACCAATGGATGAATGTTAAATGTTAAAATTTTCTTAG TGGATTTATCTTTTATCACTGGCGAGACATTGGTCACTCTTTGGCTCAAA TTGCTATAATCACTGAATTTCAAAAAATTCTATCTGACAAGATTCTTAAC ACTTCTCAAAAAGATTTTATATCTGGCAGCATTCAAATTTCGCCCTGTTA ATAGTCTAGCAAGCTAGACGACTAATTTATACATAGTAGAAATAAAGCAA AAAGTAATGAATGGAACAATTTTAGTCGTCTAGAAACCTTTGTGCACTAA CTCCAAACAAAAGAAAAGTGTCGATATTGCAATTATAATTTTTTCCTGCT CAAAATAATTCTTGAGAAAAAAGAATATGTGTGGATTTGTGTATTGAAAG TTTTTCATTTGAGTTGATTTCGTTTTGAGAGTTTGTTGTTGCTTGATAAA TTGTTTTCTCGCTACGCAAGTTTCTGCGTAGCTAGCCCCTGTCTCTATAA GGCTGGAACACCGGATTCTTCCAGTCGTTTATACAAACTAAATCCCGTAT TATTATTATTATTAGTATTGGTATTATTAGTATTACACGCATTATAAACG ACTCCAGTCTACCCTGTTAAGGACGATCTTTCATAGTCAGAATTTCATCT GTCCCGGAAAATTCTTCTTAAAAATTGATACGCCCCTGTCCGACTATCAG TTCCTCTGAAGGAAATTAAAGCTTAGCCCAAAACAATAGACGATATCGGC TTAACGTGAAATCACAGATTTGACCTCCGAAAATTGCCCACAATGATTTG CGCAGAAAAAAGTTCACGGTGAAATTTTTTCCGCACAAAGCATTGTGGGA AATTTCGGGCGTCAAATAGGAGTTTTCATGTAAAGCCGATATCGTCTATT AACCTATACATTCGCAAATGACAGTTACTTGATTACTTAATCTTCATCTA GGGATATTCCAGGACGCTCTTGCAATTTGTTAATCAGTGGTGTCCGAAAA TTGGATGCAATGTTTTATATTTCAAAAATGTTCCAAAACTTTCTAGGTAT GTATATTTCTTTCAACACAAAAACTTTAATAAGAAATAACAATATGTAAA GGTTTTAGTTTTTAAAAATGTAAGTGAAGTACCGTGAAAAGCACAGGTCG AAATCATATATCGACGCTGTGCCGACCAATCCAGATTCTATTTTTTGTCT CCTGTATTTCCATATGACTCAAATTGAAAAATATTTTTCTATAAAGCCTG AGATTTAGAGCTTTTTTCTCATTTTAGCAGATATCATTCTTGCTTGCTTT ATTCCTGACCCATCAAGATTTCAAAATTTCTTAATAAACTCACCTACTCA ATGAAATAATTTTTCAATTTTCAGATTTAATTTCTTCACATACCCTGGTG TATGGGACATGGCGACAACAACTCTAATAGCAGATAACATTCATACAAAA CTTTATTTCATCAAATATATCGGTGGTCGGCCTATCGGGGCCGTAGACCC AATCGACATTGCTCGTCTCTTATCCACAGAAATCTTACGAAAAACATTGT TACAGCGATACGGTGTTACCATAAAAACAGACATCATAGATATAAACTAC AAACGTATTATAGACGCTGAGATCAACAAAGACTTAACTATAATAGACGA TAAGAATCTTGAAACCGGGGAAGATGATGAAAAAACAAATGAGAAGGATA ATAGCTTTTCATCAGAAAGTTCATTAAAAGCAAGGATTATGATTTTGATT TTATTTGGCGTCCTCCTTGTCACAGTCTTCATCAGTATCGTATTGTTCAG AGCGAAGCCAAGGTATGAAGTTTATCAGAAGAATTTTTTTGCTTTATGCC AAATCCGCGAAACACGAATATTCTTAAGATTTAAAAAATCACCACTAAAA TTGGTAAAATAGAGTATAAATGAGGTCATATTGAAAACAAAAATTCTCTC AACAGCGACATTAAATTCCACGAAACTCCCGAATTTTCAGCTGTGAATTA AATTCCGGGAAAATTTCTTTCCTTAAAGGTAAATCAGCATTCTTTAATAA GCGAATACTATCGCATCGAGAAGACCCGTTGCCTGGAAACAGACCTGATA TCTACGGAAATGTCCAAATTCATTGCTGTAGATTGAAACTCCGGTAGAGA GCAGAAGTGAAATTGTGTCAATTTTTTGTCTTTAGGCGAGGCCAATTTGA TTTATTGTTTTATGGGCCATGCTACTCAATAAAAGGTCGGTCGGCCGGTG AAAAAATAAAAATAAAAGTAGAATTTCACCTATAAAATCTCCTTAAAAGG TAGACAAAAATGCAAAAGAATCACATAAAAAGCTGGAATTGATGGATAAA ATGAAAAATAAGACCTTGGAAAAACTACCAAAATTTTGTAAATTTGGGAG TCTGTAAAGCAATGAAAATAAATTTTATTTTTATTTCGATTTTTGGAATT TAAGGGTCGGTCGTGCTTGTAAAACAACTAATCAAATTGGTTTCGCCTTA CACTCGGACGATATCTTACACCTGGGATGTACAAAAAGTCTTCCAAAACA ACGTAATTTTTGGCAATATTGGTCAGATTAATTACAATTGTAACTTTTTC GGTCTTTCTTCAGACAACAGGAAAAGTGTCTTTAGTGTAAAGAGAAATAC CGATGGCAGACTATTAAATAAATTGCCGAAATTATTTGTCTGTCTATCAA ACGTAATCATCTTTTGGCTTTCTTCTGTAGATCGTAAGATCGATACATGT TACCTCACGGATTTTGGATTTAACACAGGTTAAATCGCGGTTTAACTTTT ATTTGATAAGCGTCACATACAGTATTCGAATGGCTGGGTGGCCGCCCTCC GCCAACTGAGTCTACTTTGCTAATAGTTACGTGACGTCATGTTCATAATG GCCATCGCATCTCCCTGTTCAAGTCGACGCTCTAACTGAAAGCTGACAGG ATGAAATATTTTTACCTCGCTCCCTCCCTGCAGTTATGGTTTTAGGCGAT CCTCACTTATTTATACTAATATTGTATTTATCGGGAAAAATTTTCCCCAA AACTTAATATTCGAGGATTAGCCATAAATTTATGCCAAACTCATATCTAC CGACTCACACTTACTTCTCAGCCGTCCGAATACTTGATTGGTTTCTACCC CTAATCTAGGCCATAGGCAAATGGAAAGTTAAATTACACGTTAAGAACAT CCGTAAGCTTCAAAATCTTTGGACATTCGTACAAAAAAAGTGTAGTAGAA TGACCAACATGTCTTTGTCGGCAAAGTAAAAGAGTCAGAGGTCTAAAAGT CTAAATAGATAATTCTTATAAGGAAAATACTACAGGAAAATACTCGACTC ACCATAATACTAGTTCTTTCATGGTATTTCCCATCGATGGTATTTCCACA TCACAACTTGGTCCCTATCCAAAATACATGAATGGTAAAGAAAGGGTATA GACCATACTTCTTGCCGAGCCACGTCCTTAAAAATCATGGGGTGAGAGTT TCTTTTAAATCCCCCATGAAAAAGATGAAATTAGTTAATTTTCATTTAAT TACCTACAGGTGTTTACGCCACTTTCATACATTACAACGTACGTCAAGTA CACAAGACGTTATTCAAGACACGGCAAACAACGATTTAGATAACCAACCC TCTTCATCAACTAATCAAAATGGAGTCGATGGCTTCCTGGAACCACCGCC TTATTCAGAAGATGATAGATACAGAAAAGATAATCCTCCGCCCAAATACG ATGAACTTTTTATGGAGGAAAACCGACATACTACAACTGCAGAGCTATAA TGGATTTATTCTGACTTTTATAATACTGCAGTATCATTTGTGGTTCTTGC ATTTTTGGGGCCTTATAGAAAGATAATACGTTTTTCATTGGAAAAAATGT GAGAACTTGATCGGACATAGAATGCATTTCTAGTTGAATTTTTATCAAGC TGGGGAGTTCCCAGAAGATCAAAAATATTAGTTCCTCTTGGACCCAACAC CCCTATTTTGGTACACAGGTAGTAAAAATCAAAATCGATTTTGGACCCAA CACCCCAATTATAGTACACAGGCAGTACATGACAAATTTTTTTCTCAAAC ACCCACCCACTCCAGGATACATGCCACCTTCTGGTACACTGCC

Coding sequence (CDS) from alignment at sc0000010:923849..933491-

>TCONS_00001508 ID=TCONS_00001508|Name=TCONS_00001508|organism=Clytia hemisphaerica|type=CDS|length=7413bp|location=Sequence derived from alignment at sc0000010:923849..933491- (Clytia hemisphaerica)
GTGTTTACGCCACTTTCATACATTACAACGTACGTCAAGTACACAAGACG
TTATTCAAGACACGGCAAACAACGATTTAGATAACCAACCCTCTTCATCA
ACTAATCAAAATGGAGTCGATGGCTTCCTGGAACCACCGCCTTATTCAGA
AGATGATAGATACAGAAAAGATAATCCTCCGCCCAAATACGATGAACTTT
TTATGGAGGAAAACCGACATACTACAACTGCAGAGCTATAAATTTAATTT
CTTCACATACCCTGGTGTATGGGACATGGCGACAACAACTCTAATAGCAG
ATAACATTCATACAAAACTTTATTTCATCAAATATATCGGTGGTCGGCCT
ATCGGGGCCGTAGACCCAATCGACATTGCTCGTCTCTTATCCACAGAAAT
CTTACGAAAAACATTGTTACAGCGATACGGTGTTACCATAAAAACAGACA
TCATAGATATAAACTACAAACGTATTATAGACGCTGAGATCAACAAAGAC
TTAACTATAATAGACGATAAGAATCTTGAAACCGGGGAAGATGATGAAAA
AACAAATGAGAAGGATAATAGCTTTTCATCAGAAAGTTCATTAAAAGCAA
GGATTATGATTTTGATTTTATTTGGCGTCCTCCTTGTCACAGTCTTCATC
AGTATCGTATTGTTCAGAGCGAAGCCAAGGGATATTCCAGGACGCTCTTG
CAATTTGTTAATCAGTGGTGTCCGAAAATTGGATGCAATGTTTTATATTT
CAAAAATGTTCCAAAACTTTCTAGAAACTATATCAGTGAGTGTGCACATT
AGTGGTATACAAGATCACACCAAATTACAGCTCGATGTATAGAGGAAGTT
TGTTCGAGCACGCTAAAATGCGATGTTGCATTTTCATACAAGCCAAGTTT
GAAGGGTCACAGATATTGCATTGGCGATGATAAATATATACAATGCCGTG
ATTGTCGCCTGGAAGAAGGTCCGCAAACTTCAGATGCGTACAGGACAGAT
GTCAACTCAATTTTCATTCACAAGTTTTCTTCAAGTTCTTCTATTGTTAA
AAATTCAAGGTGTTTACGCCACTTTCATACATTACAACGTACGTCAAGTA
CACAAGACGTTATTCAAGACACGGCAAACAACGATTTAGATAACCAACCC
TCTTCATCAACTAATCAAAATGGAGTCGATGGCTTCCTGGAACCACCGCC
TTATTCAGAAGATGATAGATACAGAAAAGATAATCCTCCGCCCAAATACG
ATGAACTTTTTATGGAGGAAAACCGACATACTACAACTGCAGAGCTATAA
ATTTAATTTCTTCACATACCCTGGTGTATGGGACATGGCGACAACAACTC
TAATAGCAGATAACATTCATACAAAACTTTATTTCATCAAATATATCGGT
GGTCGGCCTATCGGGGCCGTAGACCCAATCGACATTGCTCGTCTCTTATC
CACAGAAATCTTACGAAAAACATTGTTACAGCGATACGGTGTTACCATAA
AAACAGACATCATAGATATAAACTACAAACGTATTATAGACGCTGAGATC
AACAAAGACTTAACTATAATAGACGATAAGAATCTTGAAACCGGGGAAGA
TGATGAAAAAACAAATGAGAAGGATAATAGCTTTTCATCAGAAAGTTCAT
TAAAAGCAAGGATTATGATTTTGATTTTATTTGGCGTCCTCCTTGTCACA
GTCTTCATCAGTATCGTATTGTTCAGAGCGAAGCCAAGGGATATTCCAGG
ACGCTCTTGCAATTTGTTAATCAGTGGTGTCCGAAAATTGGATGCAATGT
TTTATATTTCAAAAATGTTCCAAAACTTTCTAGAAACTATATCAGTGAGT
GTGCACATTAGTGGTATACAAGATCACACCAAATTACAGCTCGATGTATA
GAGGAAGTTTGTTCGAGCACGCTAAAATGCGATGTTGCATTTTCATACAA
GCCAAGTTTGAAGGGTCACAGATATTGCATTGGCGATGATAAATATATAC
AATGCCGTGATTGTCGCCTGGAAGAAGGTCCGCAAACTTCAGATGCGTAC
AGGACAGATGTCAACTCAATTTTCATTCACAAGTTTTCTTCAAGTTCTTC
TATTGTTAAAAATTCAAGGTGTTTACGCCACTTTCATACATTACAACGTA
CGTCAAGTACACAAGACGTTATTCAAGACACGGCAAACAACGATTTAGAT
AACCAACCCTCTTCATCAACTAATCAAAATGGAGTCGATGGCTTCCTGGA
ACCACCGCCTTATTCAGAAGATGATAGATACAGAAAAGATAATCCTCCGC
CCAAATACGATGAACTTTTTATGGAGGAAAACCGACATACTACAACTGCA
GAGCTATAAATTTAATTTCTTCACATACCCTGGTGTATGGGACATGGCGA
CAACAACTCTAATAGCAGATAACATTCATACAAAACTTTATTTCATCAAA
TATATCGGTGGTCGGCCTATCGGGGCCGTAGACCCAATCGACATTGCTCG
TCTCTTATCCACAGAAATCTTACGAAAAACATTGTTACAGCGATACGGTG
TTACCATAAAAACAGACATCATAGATATAAACTACAAACGTATTATAGAC
GCTGAGATCAACAAAGACTTAACTATAATAGACGATAAGAATCTTGAAAC
CGGGGAAGATGATGAAAAAACAAATGAGAAGGATAATAGCTTTTCATCAG
AAAGTTCATTAAAAGCAAGGATTATGATTTTGATTTTATTTGGCGTCCTC
CTTGTCACAGTCTTCATCAGTATCGTATTGTTCAGAGCGAAGCCAAGGGA
TATTCCAGGACGCTCTTGCAATTTGTTAATCAGTGGTGTCCGAAAATTGG
ATGCAATGTTTTATATTTCAAAAATGTTCCAAAACTTTCTAGAAACTATA
TCAGTGAGTGTGCACATTAGTGGTATACAAGATCACACCAAATTACAGCT
CGATGTATAGAGGAAGTTTGTTCGAGCACGCTAAAATGCGATGTTGCATT
TTCATACAAGCCAAGTTTGAAGGGTCACAGATATTGCATTGGCGATGATA
AATATATACAATGCCGTGATTGTCGCCTGGAAGAAGGTCCGCAAACTTCA
GATGCGTACAGGACAGATGTCAACTCAATTTTCATTCACAAGTTTTCTTC
AAGTTCTTCTATTGTTAAAAATTCAAGGTGTTTACGCCACTTTCATACAT
TACAACGTACGTCAAGTACACAAGACGTTATTCAAGACACGGCAAACAAC
GATTTAGATAACCAACCCTCTTCATCAACTAATCAAAATGGAGTCGATGG
CTTCCTGGAACCACCGCCTTATTCAGAAGATGATAGATACAGAAAAGATA
ATCCTCCGCCCAAATACGATGAACTTTTTATGGAGGAAAACCGACATACT
ACAACTGCAGAGCTATAAATTTAATTTCTTCACATACCCTGGTGTATGGG
ACATGGCGACAACAACTCTAATAGCAGATAACATTCATACAAAACTTTAT
TTCATCAAATATATCGGTGGTCGGCCTATCGGGGCCGTAGACCCAATCGA
CATTGCTCGTCTCTTATCCACAGAAATCTTACGAAAAACATTGTTACAGC
GATACGGTGTTACCATAAAAACAGACATCATAGATATAAACTACAAACGT
ATTATAGACGCTGAGATCAACAAAGACTTAACTATAATAGACGATAAGAA
TCTTGAAACCGGGGAAGATGATGAAAAAACAAATGAGAAGGATAATAGCT
TTTCATCAGAAAGTTCATTAAAAGCAAGGATTATGATTTTGATTTTATTT
GGCGTCCTCCTTGTCACAGTCTTCATCAGTATCGTATTGTTCAGAGCGAA
GCCAAGGGATATTCCAGGACGCTCTTGCAATTTGTTAATCAGTGGTGTCC
GAAAATTGGATGCAATGTTTTATATTTCAAAAATGTTCCAAAACTTTCTA
GAAACTATATCAGTGAGTGTGCACATTAGTGGTATACAAGATCACACCAA
ATTACAGCTCGATGTATAGAGGAAGTTTGTTCGAGCACGCTAAAATGCGA
TGTTGCATTTTCATACAAGCCAAGTTTGAAGGGTCACAGATATTGCATTG
GCGATGATAAATATATACAATGCCGTGATTGTCGCCTGGAAGAAGGTCCG
CAAACTTCAGATGCGTACAGGACAGATGTCAACTCAATTTTCATTCACAA
GTTTTCTTCAAGTTCTTCTATTGTTAAAAATTCAAGGTGTTTACGCCACT
TTCATACATTACAACGTACGTCAAGTACACAAGACGTTATTCAAGACACG
GCAAACAACGATTTAGATAACCAACCCTCTTCATCAACTAATCAAAATGG
AGTCGATGGCTTCCTGGAACCACCGCCTTATTCAGAAGATGATAGATACA
GAAAAGATAATCCTCCGCCCAAATACGATGAACTTTTTATGGAGGAAAAC
CGACATACTACAACTGCAGAGCTATAAATTTAATTTCTTCACATACCCTG
GTGTATGGGACATGGCGACAACAACTCTAATAGCAGATAACATTCATACA
AAACTTTATTTCATCAAATATATCGGTGGTCGGCCTATCGGGGCCGTAGA
CCCAATCGACATTGCTCGTCTCTTATCCACAGAAATCTTACGAAAAACAT
TGTTACAGCGATACGGTGTTACCATAAAAACAGACATCATAGATATAAAC
TACAAACGTATTATAGACGCTGAGATCAACAAAGACTTAACTATAATAGA
CGATAAGAATCTTGAAACCGGGGAAGATGATGAAAAAACAAATGAGAAGG
ATAATAGCTTTTCATCAGAAAGTTCATTAAAAGCAAGGATTATGATTTTG
ATTTTATTTGGCGTCCTCCTTGTCACAGTCTTCATCAGTATCGTATTGTT
CAGAGCGAAGCCAAGGGATATTCCAGGACGCTCTTGCAATTTGTTAATCA
GTGGTGTCCGAAAATTGGATGCAATGTTTTATATTTCAAAAATGTTCCAA
AACTTTCTAGAAACTATATCAGTGAGTGTGCACATTAGTGGTATACAAGA
TCACACCAAATTACAGCTCGATGTATAGAGGAAGTTTGTTCGAGCACGCT
AAAATGCGATGTTGCATTTTCATACAAGCCAAGTTTGAAGGGTCACAGAT
ATTGCATTGGCGATGATAAATATATACAATGCCGTGATTGTCGCCTGGAA
GAAGGTCCGCAAACTTCAGATGCGTACAGGACAGATGTCAACTCAATTTT
CATTCACAAGTTTTCTTCAAGTTCTTCTATTGTTAAAAATTCAAGGTGTT
TACGCCACTTTCATACATTACAACGTACGTCAAGTACACAAGACGTTATT
CAAGACACGGCAAACAACGATTTAGATAACCAACCCTCTTCATCAACTAA
TCAAAATGGAGTCGATGGCTTCCTGGAACCACCGCCTTATTCAGAAGATG
ATAGATACAGAAAAGATAATCCTCCGCCCAAATACGATGAACTTTTTATG
GAGGAAAACCGACATACTACAACTGCAGAGCTATAAATTTAATTTCTTCA
CATACCCTGGTGTATGGGACATGGCGACAACAACTCTAATAGCAGATAAC
ATTCATACAAAACTTTATTTCATCAAATATATCGGTGGTCGGCCTATCGG
GGCCGTAGACCCAATCGACATTGCTCGTCTCTTATCCACAGAAATCTTAC
GAAAAACATTGTTACAGCGATACGGTGTTACCATAAAAACAGACATCATA
GATATAAACTACAAACGTATTATAGACGCTGAGATCAACAAAGACTTAAC
TATAATAGACGATAAGAATCTTGAAACCGGGGAAGATGATGAAAAAACAA
ATGAGAAGGATAATAGCTTTTCATCAGAAAGTTCATTAAAAGCAAGGATT
ATGATTTTGATTTTATTTGGCGTCCTCCTTGTCACAGTCTTCATCAGTAT
CGTATTGTTCAGAGCGAAGCCAAGGGATATTCCAGGACGCTCTTGCAATT
TGTTAATCAGTGGTGTCCGAAAATTGGATGCAATGTTTTATATTTCAAAA
ATGTTCCAAAACTTTCTAGAAACTATATCAGTGAGTGTGCACATTAGTGG
TATACAAGATCACACCAAATTACAGCTCGATGTATAGAGGAAGTTTGTTC
GAGCACGCTAAAATGCGATGTTGCATTTTCATACAAGCCAAGTTTGAAGG
GTCACAGATATTGCATTGGCGATGATAAATATATACAATGCCGTGATTGT
CGCCTGGAAGAAGGTCCGCAAACTTCAGATGCGTACAGGACAGATGTCAA
CTCAATTTTCATTCACAAGTTTTCTTCAAGTTCTTCTATTGTTAAAAATT
CAAGGTGTTTACGCCACTTTCATACATTACAACGTACGTCAAGTACACAA
GACGTTATTCAAGACACGGCAAACAACGATTTAGATAACCAACCCTCTTC
ATCAACTAATCAAAATGGAGTCGATGGCTTCCTGGAACCACCGCCTTATT
CAGAAGATGATAGATACAGAAAAGATAATCCTCCGCCCAAATACGATGAA
CTTTTTATGGAGGAAAACCGACATACTACAACTGCAGAGCTATAAATTTA
ATTTCTTCACATACCCTGGTGTATGGGACATGGCGACAACAACTCTAATA
GCAGATAACATTCATACAAAACTTTATTTCATCAAATATATCGGTGGTCG
GCCTATCGGGGCCGTAGACCCAATCGACATTGCTCGTCTCTTATCCACAG
AAATCTTACGAAAAACATTGTTACAGCGATACGGTGTTACCATAAAAACA
GACATCATAGATATAAACTACAAACGTATTATAGACGCTGAGATCAACAA
AGACTTAACTATAATAGACGATAAGAATCTTGAAACCGGGGAAGATGATG
AAAAAACAAATGAGAAGGATAATAGCTTTTCATCAGAAAGTTCATTAAAA
GCAAGGATTATGATTTTGATTTTATTTGGCGTCCTCCTTGTCACAGTCTT
CATCAGTATCGTATTGTTCAGAGCGAAGCCAAGGGATATTCCAGGACGCT
CTTGCAATTTGTTAATCAGTGGTGTCCGAAAATTGGATGCAATGTTTTAT
ATTTCAAAAATGTTCCAAAACTTTCTAGAAACTATATCAGTGAGTGTGCA
CATTAGTGGTATACAAGATCACACCAAATTACAGCTCGATGTATAGAGGA
AGTTTGTTCGAGCACGCTAAAATGCGATGTTGCATTTTCATACAAGCCAA
GTTTGAAGGGTCACAGATATTGCATTGGCGATGATAAATATATACAATGC
CGTGATTGTCGCCTGGAAGAAGGTCCGCAAACTTCAGATGCGTACAGGAC
AGATGTCAACTCAATTTTCATTCACAAGTTTTCTTCAAGTTCTTCTATTG
TTAAAAATTCAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000768XLOC_000768Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001508-proteinTCONS_00001508-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001508-exon-sc0000010-1575043694:933118..933491TCONS_00001508-exon-sc0000010-1575043694:933118..933491Clytia hemisphaericaexon
TCONS_00001508-exon-sc0000010-1575043694:928920..928949TCONS_00001508-exon-sc0000010-1575043694:928920..928949Clytia hemisphaericaexon
TCONS_00001508-exon-sc0000010-1575043694:928398..928535TCONS_00001508-exon-sc0000010-1575043694:928398..928535Clytia hemisphaericaexon
TCONS_00001508-exon-sc0000010-1575043694:928027..928082TCONS_00001508-exon-sc0000010-1575043694:928027..928082Clytia hemisphaericaexon
TCONS_00001508-exon-sc0000010-1575043694:926946..927040TCONS_00001508-exon-sc0000010-1575043694:926946..927040Clytia hemisphaericaexon
TCONS_00001508-exon-sc0000010-1575043694:926180..926617TCONS_00001508-exon-sc0000010-1575043694:926180..926617Clytia hemisphaericaexon
TCONS_00001508-exon-sc0000010-1575043694:923849..924432TCONS_00001508-exon-sc0000010-1575043694:923849..924432Clytia hemisphaericaexon
TCONS_00001508-exon-sc0000010-1510915933:933118..933491TCONS_00001508-exon-sc0000010-1510915933:933118..933491Clytia hemisphaericaexon
TCONS_00001508-exon-sc0000010-1510915933:928920..928949TCONS_00001508-exon-sc0000010-1510915933:928920..928949Clytia hemisphaericaexon
TCONS_00001508-exon-sc0000010-1510915933:928398..928535TCONS_00001508-exon-sc0000010-1510915933:928398..928535Clytia hemisphaericaexon
TCONS_00001508-exon-sc0000010-1510915933:928027..928082TCONS_00001508-exon-sc0000010-1510915933:928027..928082Clytia hemisphaericaexon
TCONS_00001508-exon-sc0000010-1510915933:926946..927040TCONS_00001508-exon-sc0000010-1510915933:926946..927040Clytia hemisphaericaexon
TCONS_00001508-exon-sc0000010-1510915933:926180..926617TCONS_00001508-exon-sc0000010-1510915933:926180..926617Clytia hemisphaericaexon
TCONS_00001508-exon-sc0000010-1510915933:923849..924432TCONS_00001508-exon-sc0000010-1510915933:923849..924432Clytia hemisphaericaexon
TCONS_00001508-exon-sc0000010-1491911889:933118..933491TCONS_00001508-exon-sc0000010-1491911889:933118..933491Clytia hemisphaericaexon
TCONS_00001508-exon-sc0000010-1491911889:928920..928949TCONS_00001508-exon-sc0000010-1491911889:928920..928949Clytia hemisphaericaexon
TCONS_00001508-exon-sc0000010-1491911889:928398..928535TCONS_00001508-exon-sc0000010-1491911889:928398..928535Clytia hemisphaericaexon
TCONS_00001508-exon-sc0000010-1491911889:928027..928082TCONS_00001508-exon-sc0000010-1491911889:928027..928082Clytia hemisphaericaexon
TCONS_00001508-exon-sc0000010-1491911889:926946..927040TCONS_00001508-exon-sc0000010-1491911889:926946..927040Clytia hemisphaericaexon
TCONS_00001508-exon-sc0000010-1491911889:926180..926617TCONS_00001508-exon-sc0000010-1491911889:926180..926617Clytia hemisphaericaexon
TCONS_00001508-exon-sc0000010-1491911889:923849..924432TCONS_00001508-exon-sc0000010-1491911889:923849..924432Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000010supercontigsc0000010:923849..933491 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.306249 0.419819 0.955515 1.00815 1.30252 1.25741 3.66691 3.58616 1.55887 0.895962 0.620542 0.941354 4.41821 4.67081 8.54698 5.72778 1.16718 0.743172 3.93163 3.42858 0.364429 0.699913 0.108043 0.171896 1.24788 1.28667 0.364275 0.310263 0.339912 0.399596
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00001508 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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