TCONS_00001475 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001475
Unique NameTCONS_00001475
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1477

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001475 ID=TCONS_00001475|Name=TCONS_00001475|organism=Clytia hemisphaerica|type=transcript|length=1477bp
GAATTGTTGTTGAAAATTGTAGAGAAGATTATTAGAGAAAAGCGattgat
ttttttcagataGCTTTTTTTATCAACTTGTTCAAAATGAGATTTCTTAA
GATAAATCTTGCAAAAACATTCAGTAACGGAAAGAGTGGTCGTAGACGTT
CCCAAGACCCAAACGTTATCCATGAAAATCAAACATTGAAAAGTACAACT
GCCAATCAGAACACGTCAAATATATCACACGATAAAGAGAACAAAGAACC
AGTGAATCACGCGACCAAAACAAACGGGACATCAGATTTTGTGAATGGAC
ATGATTCAGTAGATGCAGTAAGAGAAGAACAACGAAGTTTTGAAGAACCA
GATAGTCCTGGTGGAAGACGACCAAGTCAAACATTTTATGGTTCAGAGAA
ACAAGTCCTCCGTGATGGAAGAAaaataAAAGAGATCGAAGTGACAGGTG
AACGACCTGATGAATCAAATACTGATATGAAGAAACAGAAGAAATTACAA
CGAAGAAAATCCATTGATAAAGAAGAACTGAACGTCTCTTGTCGTGCTCT
CGGTAAAGCTGACCATGAGGGCTGGATGTTCAAGAAAGCCGGTGGACATG
GTATTGTTCCAGTAAGCTGGAAGAAATTTTGGGTGGTTATCAAATTAGGG
AAAATATATTGCTACAAAACGTCATTCAACATGCAAGCAGATTATTTGTT
TATGGTCACTGACTACAGTGTGGATAATGCTacagagaaaaagaaaaatt
tCGCTTTCGTATTGAAACCAAACGAAGAAGACAAGAAAGGAGTGATTTTC
GCTTGTGAGACAGAACAAGAATGTAATGATTGGATGGGAACTATCAACAA
AATATTGTCCGGTGTCCATCTCAACAATGAAGAAGATGAAGAAACGACAG
GATTACCTGCAGGATTCGGTACTCGCACATCCTCAATGTCACAACCGCGC
GTACGAAAAATGAGCGCTGGAACGGGTGCACCAAGCTCTGTTCTATCTGT
GGGTTCAATGTTTCACAAATTAGAAGAAAAACCGAAGGAAGACcaagatg
aagaagatgatgAAGATGTCGAAttaaaagatttattatacaaagAAGTC
GAAGTCGAAACTGAAGCGCCCGCAAAAACACCTTCACCCAAACCCGCTCC
CATTCGTGTGGTGGAGCCTGTCGCTAAGCAAGTCATTCAAACAAAAGAAC
GCGAAAACGAGAAAACCGCCTCCATTGATGCTGAAACTATCAttaaagaa
atggaagaaaaaacgaaagaaaatgAGGAGCCGACCCCAGAGCCGGCACT
AGCTGGTGCTCCCGTCTCTGTAGAGCCAGAACCAGTTAAAAAACCAGAGC
CAGTTGTTCTTCCCGTCTCTGTAGAGCCAGAACCAGTTGAAAAACCAGAG
CCAGTTGAAGAGTCAAAAGCGCCAGTTGCGGAGCCAGAAGCATCAAGTGA
CGAGACAGAAGAAGCAATTGAAGTCGC
Run BLAST on NCBI

transcript from alignment at sc0000010:414932..431214-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001475 ID=TCONS_00001475|Name=TCONS_00001475|organism=Clytia hemisphaerica|type=transcript|length=16283bp|location=Sequence derived from alignment at sc0000010:414932..431214- (Clytia hemisphaerica)
GAATTGTTGTTGAAAATTGTAGAGAAGATTATTAGAGAAAAGCGATTGAT TTTTTTCAGATAGCTTTTTTTATCAACTTGTTCAAAATGAGATTTCTTAA GATAAATCTTGCAAAAACATTCAGTAACGGAAAGTAAGTTGCTAAACTAG CAATATTGCGCCATTTTATCTTACTATCTATTTTCATATACAGTGTCAGC TAGAGTACATCTAGTTCCAAGTTTTGTTATGTAAGTCAGAATGTTGATAC CGCTTTGAAATATATTTTTTCAGTCAAGGGGTACATACTTTACTGAGCTT GCACACGTTTTATTTATAAGAACATCCAAAACTTTTGAAGCCTTTGGATG TTCTTAACTTTTTGGCTTTTAAACCTAAAGAAAAGTTCTTATTTTCTCTA TTTTGTGACCATTTTTACCCATTTTCCCTAAAAATAGGGTGCTTTCGAGT CCACAAAGCAATCTAATGTTCTTACAATATTTTTAACTTGTTCTTAACAT TTTGGACATCGAAGCCTTATGTTCTTATAAAGTTTTTCTTATAAAAAAAA CGTGTACCTTACTGAGCTTTTAGTCCCTGGTTCTACTAAGTGAAATATTG TTTTTAGGAGTGGTCGTAGACGTTCCCAAGACCCAAACGTTATCCATGAA AATCAAACATTGAAAAGTACAACTGCCAATCAGAACACGTCAAATATATC ACACGATAAAGAGAACAAAGAACCAGTGAATCACGCGACCAAAACAAACG GGACATCAGATTTTGTGAATGGACATGATTCAGTAGATGCAGTAAGAGAA GGTGAGATTCTAGAATTAAAAAATCACAGTAGCCTAGTGCATTAGGAATT AGGGACTCAATGTTTGAGATCTCAAGATTTCTGTCAGGCAGTTTTTCTGC AACACTACGGTTTGACTTGAATGTTCTTTGAAACATTTGAAGCTGAATTT AAATTTGTTTGTTGAATTTGCCCTTAACCCTATTCGGACTAGGGGGGGGG CTCTTTCTGTTCGGAGGTCAAACTATTGGTAATAGCTCCTGAAATAATAG AGCTTTTGCCGTGAAATTTTTTGTAAATTCCTAACTTTTATTTTGCTTCA AAATAAAAAAAAAAATTTGACACTTAAATATTTTTACACCTTGAGCATGA TGACATTTCTGACAGTAAGGTGTCACAAAAATTGACACTTTTCCAATACA ATTTATTTTTAATGTCAAATATATCGTTTAAACCGTAATTTATTGAATAT TTAGGATAAAATAAGCATTTTAAACTCAGGCAACTTTTTTCTAAAGCCTT TGTTAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNACTTTTTTCTAAAGCCTTTGTTAGAATACAA TAGCTATTTATAAGAACAAAGGAAATTTTCGGTTTTTGCTCACTTTGGGC ATGATGAGTGACGTCATCAAAAAAATGTTCTGTCAAAAGTTACCTTACGT GACAAGGATCTTGTGTGCCAAATTTTATCCAAAAAGACCAACTAGATCAA AAGTTAAGGGGTGGTACAGGAAAAGCCCCCCCCCCCTAGTTCTGAACCGC CCCTAAAAGCCTAGTTTGAATAGGGTTTATGCTCTGATGAAAAAAAGGTT TTCTTTAATATTTGGACCATTTTGAGTCGTATCCTTATTTCCGTTTTGAA AATATTAAAAGTACTGGAAAGAAAGTTCAAAGTAATGATACTGCAATGTT TTGTTCGTTGATTTGATTTAAAATATCTACTTTTTCATATCATGGAGCGA TTTTAGAAAAGGGGGCCGGCAAAAAGGATGTTTAGAGTGCAAACACACTT ATAGATTACAAGGGGAAGTTGTTGTACTGTACATGTTTTTTTATAATAAC ATCCAAAACTTTTGAAGCCTGCGGGTGTTCTTAACTTTATTTTTAAGTTT TAAGCCTAAGATAATCTTATTTTCGCCATTTTTTGAGTATTTTTGACCAT TTTTCCAAGAAATTGGGTGTTTTAGAGCTTTGAAATGTTTTTAACTCATT CTTAATACTTTGGCCATCGAAGCCTTATGTTTTCATATAGTTTGTTCTTA CGAAAAAACGTGCATCTTATACACCCTTCCGTCTTCCTGGTTCAATTTTA TTTTATCGTTCATTCATTTATTGCTTGGAAAGAAATGAAATGAATCTTGG TGGTATTACTCGCTAGCTTCGCTATTGAGTAATTTTATTGTCAGATTTTC ATCATGTAATGGTTTTGTGAGCTTTACAATTCACCAATGCTTTTGTGGTC TAATTTCAAAATTTACCTTATTCAGTTTTTTCCTAAGTATCGACAGATAT CATTTTGATCTTGCCAACACGTCGCTAGAAAGACTCTTTCTTTTAAGCTT TAGCTTGAGCCTGAAAACACCCTACTTAGACTGATTTTTCTCCTGGAAAT GGTTCCTCTCTGAAAGAAGGACGTTTTTTTTTTGCTGCATAACAATCAAT GCGTTATGCATTTTCGCTAAACGCTATATTTTCTGACTGATTTTTTTCAT TTTTCTTCTCGCATTGCTATCTAACTTTCATCATCAGGTAGGTCCATTCA GCATCTAGCTTGCTCTTGTAAGAATCAAAAATAATATCATGTGAAAGATC ACCAAAATAAAGGCTACACTCCTCTTGTAATAGTTGGTATTTCTGATGTT TTTGTTGACTTCTATGAAAACCTTCTGAAATTCGTATTCTATATAATATC AAATCTTCATAAATTTAATGAAACATTACCTAAAGTAACTCATATTCTAG AAAAGAATTTATGGTTTTTCAGAGGGGGATATACAAGAAGAGAACCACCA CATCAGGGAAAGAAAATTGAAAGTTTTTACAAACAGAGTTTCACCGTTAA AACATTGTCAGCTCAAAGCGTGACCTAATATTGACACAAACGATTGGGCT CTGTTTTCGTTTGACTGTGTTTGACAATAACACATTTTCTTTATTAGATC ATACTAAATTTTTGAAGCTTTCAGATGTTCTTAACTTTTTGGGATTCAAG CCTAAAAATGTTCTTAAGATGTTCTTATTTTCAACATTCTTTGAGTATTC TTTTCCATTTTCCTAAGAAAACAGGTGTTTTAGAGGCAACAAAGACTTAA AATGCTCTGTAACTTGCTCTTAATATTTTGGCCATCGAAGCCTTATGTTC TTATATAGTTTGTTCTTATAAAAAAACGTGTAATTTGAAAAACACGATGA TAAATCATTGGAAAAATAAAACTTTTTTACCCAGTTTTTCTTCCTAATAT TTTTTTTATTTTTGCAAACTCAAAGATAAAAAAGATATCGAGAGAAAAGA GGTTGGATTTGAAACCGCCTTGATTTTTTGATAAGGACCTGGCTTTATTG GATGGTTGTTTTATCTGATTGTGCATCGAATTTGAAGTAGAAAGATGCCT GCTCCAAAAGGTCAGTACCTACTTCTTTTGCTTCTTTTCGTCATGGGCTC ATGGATTTTCATTCCATATAGTGGTTCTGGTTACTTTCGTTGGAAATAAT TACTTGCCAACACCTCAGTGACCAGTGATGTTTTGAAATCCACCAGTGTG GTTATAAAAAATTGAAACTTCACCGGGTTTGAATTTTAGATCTCAAAAAT TTACTGTTCGCTGTGGTAGGGAGAAAATTCATTTTCAAGAATGGACGAAT CTGGTTTTCCTAGAATTCATTAAAATGTTTTTTTTCGATTTTGATGATCT TATGACCATAAATTTCCTAGTTTTGATCGGAGTAGAGAATTTCAATAAAA TTTGACCGAGTTTACTCATACTCCTACCGGGGCTCAAAATTTGATCATTT TTAGTGATTACTTTCACTGGGACGGATCTGACCGGGTCATCGATACAGGG GTATTTTGTAGACCGAAAAAATCTTGGAATAAATATGTAAAAAAACATGA AGTCATTGTATTATAGAGAGATTTTGTATGAGTTTTGTAAAAGATTTGTG GTCAATAAAAATCTGCGCGATGAAATGGACAACAAAATTAGACTGCGGAT TGTCAGTGTAAATTTTTAATTAAATCTATGTAACCTAATGTGGTCACACA TTTCCTGGTTACTACCATACAAATTATCTTTTCTTGTTTGATTCGCAGAC TTCCATACTTCTTATATATAGAAACTCCCACCAGAATTTAGTTTCAATTT TAGCTATTCAAGGAGGGTCGGCATTTTGAATCCCGGTGATTCTGCTTATT AGAGATTCCACTGTAATAAAAAAAGATCACGATGGAAGTTTTTTTCGTGA TCAGAATAAAAAGGTATCGTGATAGTCACGCATGACAAGACCAAGCTGGC ACGCAACTTTGTACGTAACGGACGTTATGTACGTTTAATGGATGTTTTGA TGACGTTTTGTGTCAGCTGGGAAGCGTTGCATTCTCTTGTGAATGAAGCT TAGCACTTCAACATTAGCTAAATTTTGATAGAAATCTAATCTAAATTATA CTAAGTCTTACACTCAACCCTTATATGGAAATTTGTTTTGCTTGTGGGTT AGATGAGTATAACGTATGGAATTTTGTTGCTTCACAAAACAATCGTTTTT TCTGAAAACATATTTTGTTTTAATTTTGATATATTTAAGCTAAATCTTGT TTATGTTAGCTATCTGAGAAATTCAGGCTCACTACTCTTTGCCAAATAGA TTTTGGATACCCCATTCTCACAGACCCGGTAGGATTTTTTCAGCCATTGG GGATAAAAATAACGGACTGAAACTCGATGGGGATTGATTTTCTCATATTT TTTATAGCTGGGGGTCTCAATTCTTTGTTTTCAAATCAGAAAATTCGGTG GGGATGGGAAAAACAGAAAATATTTTACAGTGAGGATTGGTTTATTTTAA TTTCAATGGGGACAAAAATTGAAGGAAATTTTTTCACTGGGGACGATATT TTGGCCAATTTTTTAGTGGGAAGGGGTCCCAGTGGGTCTTTGAGAAGGGG GTGTTTTTGGTTTATAATTTCAAAATACTGTAACGTCAAATGATGTCTTT CCTTCCCTTTCACTCGCAATTCTATCGAAGTGATAATTTTACCTAAAGGT TGCTGTGTAATCCACAAAGCTTTGACATAATAAAGTTTTCTTAAATCTTG ATTCTTTCGATTAATGTCTTAAGATTTTTCTCATAAAATTAATCCAAATG ATTAAAAATCGACGTCAAATTTTCATTCATTGATTCAATAAAATTTTCAA TTTAAATTTTCAAAACGCTATGTTGTTTTTTGAAATTTCTAAGATATTCA AACATTGACAAACCATAGTAAATTGTAAATCAAATGCGATTGAAAATTTA AAAATTGAAACCAACCGTACTAATGCAAAGCAAAGAATTTTTAAATTCAC AACTAATACCAAGCGCTCACGAAAAGCTCTCACGATGGTATCACCAGTTA AATCAAAAAGTGGTGCTAGTGGCTCTGGTTGTGAGATGAAACCAAAACCA TACCCATGTCATGAAATGAATCAAATAATATATATTTTTTGTGGTGATTA CCTTTCATGAAAGGCAAAGGCTTCCTAATTTTTAGTGAATGGCTTATTTT CACATTTTATTTTCACTGATGACACCAAACTCTCTTAAAATTTCGTCCCA ATTTAATTCTATCCACTTCTTAATTTTTAGAACAACGAAGTTTTGAAGAA CCAGATAGTCCTGGTGGAAGACGACCAAGTCAAACATTTTATGGTTCAGA GAAACAAGTCCTCCGTGATGGAAGAAGTAAGTTCTTCGACTGCAATGCCT TATTTCATCTAATTTCACAAAACCATTGTCCTGTGGTTTTTAATATATAT ATTTTTTCGTTTTATGGCAAAAGCTTAGAATTTTGGCTGGTGGCTTGACC ATTATTTGGTGGTGTCAAAAGCTTTTAGGGAGTATCTTTTGCCAGATTTT GTTCAGTTATACCCCGCACCAAAACCATGGTGTCGAGCAGTTGCCATGCC ACTGGTGGCTGATAAAACAATGTTTTATATTTCGTATCGATTTCTTGAGA GGAAAAGGAAATAAGAATTTATGCATTTGCAATGATTTTTCTGTCATGAA ATTTGATACCTCTAATATAAATGTCGGATTAATAGGGTATATTTGATTTG GATTATAGTAGAGCCGTCTGTAAAAATAATCATTTTTCATCCCATATCAA ACAGTACATTTTCATCATGAAAGAAAGTCTGTTATGTTGTGAGNTTCCAA TATCAAACGGTACATTTTCATCATGAAAGAAAGTCTGTTGTGTTGTGAGA AGAGGTTTTTTGTTAAGTTTGACCTAACATAGAATTTTATTTAGGAGACC TTCTGTCTAGAGGCTGTTCGACCATCTTGGAATTGTATGCATTGCTTTTT AACTGGATTTATTTCATATTAAAATGTGTACTTATATATAAATTCTGATG GTTACTTCTCTTCCAAAAGTGTCTATCTATGGAAGTTTTTCGTCTGTTGA TCAGTAATGGCTTGCTAAAGTTTCCGTATTTCAAATGATGGTTTATTGCA TTTCTATGAAATTCTTAGCCAGATTAGAGATTAGACTTAAAGACCAAGAA TTAAATGTCCTCTGAAATTTGTTGTTTCTACTAAGCTTCCTCGTACTTTA AGGAAGTTTTATAGCGATTTGAAAGGATGCACTTTTATACCAGACTGAGC TTGATAGGTTGGTTCTTGGTCAGGTTTGCTCGTCTCAGATCTTATATAAA AAAATGTCTACAAGCTGACTAAATTTTGAATGATTGAATCTTTGAAACAT AAATTCTAAATTCGTGGTAATTCATTCGAGATTTCAGGCAATATTTCGGC AGCTTTTGTTTCTAAAGAGCATGAACTTTTAAGAAAATAGAGTGCCGTTC TAACGCAAGGGCGAAGTACTATGATTTTATTGGAAAATTTCTGATTAAAA TGGTTTCAAATTCAGAAGCCTGAATAAACAGTCCTTGTCGATCCGCATCA ACATTACATCATCCTAACCCAATGATGTCAAACTCTACAAAATATCTCAG TATGTAGTCCTCGTTGACTTCCTACTAATCTGACTAACTCACAATACAGG ATCTTCTCTTGACTTTTTATGGTCAGTAGTTTATACGTTATTCAGGTTGA GAGGCAGTGACGTCATATTTCAAACTGATAAGCTTAGAGGCAACATGTAA TAATAGAGAAATTTGAAAGAATTGATTAAAATCAATGAGGTATTTTTAGT GTGTAATAGTATGTTATATTGATAAGGTATAGAGAATTTGAAATTAGTAA CGTATTGTCAAAAAACCTACACGATAGAGCTTATATAATCAAAATTAAAC CCTTATGAAAAACGCAGTCGACCTTTATTTTAATCATAACAGAAGTCATT TTTTGGTTCGATATAGAGAATCACGGGAAAAAGAAACACGTTAAAGTTAA AAGTTTTTTTGAGAGAGAATACGCTTTTGATTCGGTTTTTTTGAGATTTG AGAATTTCGTCAGATCATGGATTGGATTTCAAGGTTTAGTTCCAATTCAA AGAGAAGATTGAGAAGAAGTGTTTCAACGTTCAGTATCTTTGGCGGAGGA GGTAAGTTGTTCACCATAGGGGCCATGGCTCCACATTGAAAGTGATAGTG CAGCAATATACTGACTAAGGAGGCTCCGCCGTGGTAAGGGTCCTAAAACG CATAAAACAGATTTGTTTTAAGGTTACTAAATAGAATTTGGCTTGATTAG TAAATTTTCTGTTTGCTTTGAAAACGTGGTCGGGCAAATTCCCCCCACCA GGCTGCGTTAAAGAAATTGATTTATAAAAAGAATAACAGGCTTCAAGAGG TTTCAAGAGGAAAATTTCGATATCCTTTAGATGAAAAGAATTGTGTTTAG GTTAATTGATTTAATTCTTATGTTCTTATGAATAGATACCAGAATTCTTT AAATTTCGATTTTGGGTTGCTTTTATAATTACTTACACGGAAACCAAAAC TCTCCGTCATGAGTTTTGAACGCTATCAGTTCCTCCACTCTAAAGTGTCT ACATAATTGTTTTGGGTAGATAGAAAAGATAGCTACAGTAATGTATTTTC ATGAGATGGGTAAACTTTTTAAAAAAGGTATTTAAACTATGTGTCACTTA TAATATTGCGGTAATACGGTAGAAATCTGAGATGTGAAATTCTATTGAAA TGTGTTTTTAAACGGGTATTATTTCAATGAAATCAATAAAGTTATTGCCC AATTTTTTTGACAAGATTTGTGAGTATTGATTTTCGTTCTGCTGTTTGTG GAGTACTAACTATGTCATCACTGAAAAAGTTAAAGGGATTTAGAGAGATT TTTGGAGAGTATTTGCAAAATGACTTTCAAGTGGTCAGTTGTGAAAAGTT TCTTCTAATTCACAACGAAAACGATTTTAAGGAGTTTTCACTCTCACGTC CAAGAAAGTTTGAGTAAAATACTTGATTTTTATAATATAATTTTTTTTTG GGTTAAAACCTTTTAAAATATTATCGTGAGAGATTTTAAACACTACAACT AAAGACACACCCCTTTTTGTGAATAAGCTTTAAAATCCAATGCTAGACTA ACATGTTCAAGGGGTAAGATTGACTGTGTTAGAGGTCACATTTTGTCACG CTATCACTGACACTCTTACATTTCTTTTCCTGTAACTCTTTTCTGGTCAG CCCAATGAAAGGTTCTTTATTTGTCTGATGAGGTGATATTAAAAGGAGAG TCTACTTTAGACCATGTTCACACGTTACTGTTCCGTTTCGCTCTGGTATG ATTTTCGTTACGGATCGAGAGTGTTCATATTGGTTTCAGAACGTTTTGTA GAACGAAAACGGAGCAGTTTCATTCAGATGAAAAAAGTGGAGTGAAACCA TTTCGATCTGTTTTGCTTTGTAACGTCTTTTTTTTGACGTTTCGAATTTT GACGTTCACACTTGTTTCGGAACCGTTTTGTTTCGGAACGGAATGGAACC GTAACGTCTGAACATGACATTAATGTCCTTAATTTAGTTACTTAATTGTT TTTTATTCGAATAGTCTTTTACAAATCAACCTGTCCGACTCTTGGTTCTC CCAACCTGGCCTGGTATATGGAGTAACAAACGGTTTGTTCGATTAGATTG TTTATAATTGATTATTTAGATATCTATTAGCTAAAAAAGCTAATTTGCTT TTAGACTGGTAGCTAGTACCAGTCTCCAAAGGATTGTGANGTTAGATCGC AAGCTATTGATAAAAAAGCTAATTTGCTTTTAGACTGGTAGCTAGTACCA GTCTCCAAAGGATTGTGATATTGTATGTTGGTGTTTGATGCAGGCTAAAC GTTTTTTTTTTATAAGAATAACTTCTATAAGAATATCAGGGTGTGATTTC AGAGTTAGAACAATAGGTCTATTGTTTAGAACAATAGAAATATAAGAATA ATGCACACCCTCAGCCAAAGTACACTATTCTTATAAAAGAAAAACGTGTA TGTGTATTTGTTTTTTTCTTTCCCATTATTGGTCACTAATTAAACTGAAG CCATTTACAATTAAGTTATATCTAGCGTAATAGCATGCAACAAGCTGCTA TTTAGATACAATATGGCAATTTTTGTTGATATTGGTTTATTTTTACTTTG TAAGGTTATTCTATTTGTTTCGTTCTGATATAAACTTTCGGTTGTATTGT GGTTTATCTGGAGGCATATTGGATAAACTACGGTATTATTAGCAGAGTAA TGCTTGCAGGTGGGCAGTTGGAGCGAAGCTAATTCACTCCTGGAGAAAAA GCCACCGTTCCCCACTCTATGAAAAGCATGAATTAAGTTATCACGAAGAC ATAATCACAGAAGTTTTTGTTGACTAAGAATTCGCATTTGAATGGCTTGG GTCTCTGATATCAATGATTATTATAGTTAACCCGGGGGGTTAATTTACTA ATTTTCAAGATGTTTATCTGACAGGGTCAAATTTTGGTTGCGATGTTTAT CTGGCAGTGTCCATTTTTTCAAACTCCAGCGGCACGTCCTCGTCGGCCGG TAAGGTTAGTGCCCCCCACCCCAGGAGTTAACTAATTCGAATTCGAAACG GGTAGCCCATTCTGTTCGGATAACAGAGAGATTCAAATAATAGAAAGTGT TTTACTAAGAATTAGTTCGAATTATAGAAAGATTCGAATAATAGATGTTC GAATTAGCGAGTTTCAACTGTATGTAGACTATCCACAACAAACTTATCAA AAAACTAATGATTTTTTCATTCACGTGTGATGACTTTCAGTTTTTGGTTG ATTGGTGCCAATTGAATGATATTAGATTGTTGGCAATCTCCCTCTAAGCT TTTATCAAGCTTATTTGCACTATTTAAAGAGCTTATAGCTACAATATGGA AGATCTTTCAATCGAAAAGAATTCCTTATTTGGTCATGACTGCTCTCCTC GATTGAGTTTTTGTTGACTTTTGTTTTAAACGGTGGTTAATATTTGCATT CTGTTCTTTGAATTCGTCAAACTTTTTTACGTGCAAACATGAAGATAATT TTATCATTATTGAAGGCGATATTTTTGTTAGTGCTGGAATCGGAAATGAA AATTGTATTGCTGGTTGCGTGTCTGAGTAGATGTTTTGGCAATTGAACTT TTGGTACCTATCTGTACAGCGTATTCTCGATAACTTCTGATCCTGCAACG ATGTTCAAAGTCCTAATAACTAGAAATTGACTTTTCGTTGGGGAACACAA TTTCCGGACAAAGTTATAATCATCATCTTAAAACTTACCTATGTTATTCT CATTTGCATTAATAGAGATGTATAGAAAATCAATAGTTAAGTAAGAAGCT ACAACGGGCTACAGTATTCAGGGGTCTTTTATAGGCCAAATTTCGCCGAT CGAAGCCACTAAAAAATTACAATTCGCCTGTCTAAAAGTNGACTTTCGCC GATCAAAGCCACTAAAAAATTACAATTCGCCACTCGAAAAGTTCGATTCA CCGTCTCAAGTACTTATTCACGCTAATCAATACATTGGGGTTGCTAAGAA TTTGGGGGCCCAGAATCTAGAATTCACCGAGGGAGATTTTTCATTTGCCA GCCTATCGAAAACAAAGCAAAACCCCCGATGAAAAGTGCTGTCAAGTAGA GAAACTGGTAAAACACACGTTTTTTATAAGAACAAACTATATAAGAACAT AAGTCTTCGAAGGCCAAAATGTTAGTTAAGAACATTTTAAGGCTTTGTGG ACACTAAAACACCCAGTTTCTTAGGAAAATGAACAAAAATACTCTGGTAA AAAATAAGAACACGTTAAGACCATTTTTAGGCTTAAAACTCAAAAAGTTA AGATTATTCGAAGCCTTCAAAAAATTTAGATGTTCTTATGAAATAAACAT GTAAGCGAAATCAAACTTACGAGCTTTACTCTAAGTGAAATAGGGTTTTG AATTATTAGTAGAACGTCTATGGTTGTAAGAACGGGCAACAACGGGCTAT TAAAGGGAATTTAGGACGCTATGAAGAGCTGGGAAAATGGCCTTTTTTAA CAACTTTGTACCATTTTCTTTTCAGAAATAAAAGAGATCGAAGTGACAGG TGAACGACCTGATGAATCAAATACTGATATGAAGAAACAGAAGAAATTAC AACGAAGAAAATCCATTGATAAAGAAGAACTGAACGTCTCTTGTCGTGCT CTCGGTAAAGCTGACCATGAGGGCTGGATGTTCAAGAAAGGTAGATTGAT AGCTTTTTGTTATTAGAATGGTGTTTTCCACTCATGGATATTCTTTAACT TTTTGGGGAAAATCATTCTGAAATATTCTTACAGCATTCTTAGGGCCAGA ATCCAAACCCAGCCTAAATTTAACATGTAATGCTAAAATTTGACATTTTT GGGAAACAATTGAGCATTGCTGGGAAATAATTGTTAGTTTAAGGTGAAAT GCTCAAAAATTGGCATTCTTAGGTTCAGTTCCCAAATTCCGAGATGCTAA AAGAAAAAGCGTGTACCTATCAACCCGTATTGAATTCTGACCTATTTAGT AAACTGCAAGGCAATTCTTACTACTTTGATGCCAAACTGAAAAAATACTG ACAAAAAATACACTATCGTGACGAGTTAAAGAGGTTATCTACCGATCTCC TTTCTTTATATTTTCCATTTCACTCTCTACTTCTAGTTACCCGTGGGATT TTGAATGTTTTAATGTTTTTCTCCTTACAGAGTTAAGGCTAATTCATATA GGTGGTTTTAGACTATGTCGAACTTATCAGGGGAAGAGATTTGTAATTGT AATTTCATTGTCTTTTAACGAGCGTTGCACTCCTTCGCATGCTTCCGACG TACTTGCTCTGTCGTCTTTGCTGGCTCTTTGTTGGTTTTCATCAATATAA TTTGCTGTTTTCTTTTTAGCCGGTGGACATGGTATTGTTCCAGTAAGCTG GAAGAAATTTTGGGTGGTTATCAAATTAGGGAAAATATATTGCTACAAAA CGTCATTCAACATGCAAGCAGATTATTTGTTTATGGTCACTGACTACAGT GTGGATAATGCTACAGAGAAAAAGAAAAATTTGTAAGTATATCTTAAAAC CATTATTTTGATATGGGCTTTAAAACGCTATATTTTCAAAGCCTTAAACT TCAAACTTTTTAGTTTGAAAGCTATTTTCTCCCTCCTCGGTATATCTAAT ATATCACATGAAATTGTACTCGACATGGAAGCAAAACTTGTTTTAGACCT TCTCTGACAGCTAAAGGGTAGCATACTAGGAAGTTCTTGAGTACAAAAGG CAGGGATCACATTAAGGCCCTCCAAACGAAGAATTTCGCCGTTCCAAGGC ACAAACAAAATTACAATTCACCGGTCTTAAAATTTGTTTCATCGCCTCAA GTACATATTCACGCTAATCAATACACTAAGCTTGCTAAGAATTTGCCGTC CTAGAATTCGCCGGAGCTAATTTTTCATTCGCCAGCCTATCAAAAATAAT GCAAAACGTGCCGTTTCATTTCAAAACGTACCATTTTATTTTCGTAGCGC TTTCGTATTGAAACCAAACGAAGAAGACAAGAAAGGAGTGATTTTCGCTT GTGAGACAGAACAAGAATGTAATGATTGGATGGGAACTATCAACAAAATA TTGTCCGGTGTCCATCTCAACAATGAAGAAGGTTAGTACCATTGAGTTTA AAGACCCGAAGAGGCTAGAGATGAATCTTTAACCTTGCTCAAGTAAGTAA AAAAAGTGAAGCGTTAAGATTTGCGCCACATTAAGAATGATGGTTTACAT ATAACACTTTCTTTGTTTTCAAGTGGCATATTTTTCGAATTCTGGCGATA TGTTTTACTTTCAATCTAGCGTTTGTAGGAAAACTACGCGGGTCACGCGC TAAGAATGGGAAATAAGTGACTTTATTTCCCATCCAGGAGTCTCGTATTT AGTCCTTCCGTCTTGGAAGTCAATGGTTAGTACGCATGCATGTTCAAACA AGAAGTTTATCTTTTTGTCATGAACCTAAACCTAAAGTCCATTTGCTTAA ACTTTTCTTCTTTCACTATTATGTGGAAACCACTCTTAAAAGAATTAGTC TAATTGAGCTGACATGGTTTCCACATGAAAGATAACATAGTTTACACTTA GTTACAGCGAATATAGACACAGCGTCAGCTTAAGTTTGAGTAGATTTTTG TCATCAACTTTTGCCTCTCATGCCAAAAATTAATTGGGCTTATTAGCTTG ATCATGATTCGCGTGCAGCCCTTCCTTAGTTTTATATATAGTTTAATATC ACTTCATTGATTTACCAAATACCAATCGACCCCAGAGTTTAAATAATAAT TCATATCTTGCCCAAGTTTATATGCATCAAACCAATTCAAATCTAACGAT AATCAACTCTCTTCTTTTTCCATACGCCGCTCCTTATCACCTACCCTTCA ACCAATCAATAACAATCATTACGTCATTATTACATCATTATTCATTAATA AAATCAACAACCAATCAGATCATTCGGAAGTGCGAGATTATGAAGACCAC AAGCGATTGAACGCCATCAAACCAACATTTAAAGAAGAACACCAAAATAA TGGTGTTCGAAAACATCGACCTATTTCTATCGCTTTCCAATCTCAAGAAG GTAAGGTTTTGCTAAACTGGAGCCCAGTCCTTTAGTTCGATTTTTTATGA TTCTGCTTAATTTTATTGCTTTCCAATCTCATTAAAGTAAGGTTTTACCA AACTCGAACCCAGTTCCCCAGTTCTCTTTCTCATGATTCTGGTAGCGCTC ACAAAAGGTTACGTTCATCAATCAAATCAAAAAGTGGTACAAGTGTTCTT GGGTGAGAGATTTAGGTTTAGTATATCCAACAAATTGCCATATCCATTTT TGAGTTACCACTCGTCACTTTTAATTTCAAAACTTCGAAAATATTCTTTA ATTTGACTTTCGGATGACAAGACGCTTTTTCGAATTAGAGATTCGAATTA CGGAAAGCATTTTTGTAAGACCTTACAAGCCTCATCATTTATGTTCGAAT TACAAAAATCTGAGTTGTAAAGGCTTCGATGAGAGAGTGAACTGACTTGA AGTGATCCATTTTTGATACGATCTAGAAGAGAGGGAAATAATATGGGCTA AACACTCGAATTTTCTCCAGTCAACCATTTTTAAAGAACAAATAATCTTA CACGAATATACTTTTTCTGTAATGACTATCTTGTATGTAGAAACACTATT CGCATGACTATAGCATTACTTTAGCTAACATAACAAGCACAGTAACATGT ACATCTTATAACACCAGTAAAACTGTCTTAGCCTTGAAATATATGGTTGA ACAAATCTTGCACGAATGCTAGGTTTTATTGACACTTAATTTCTATTATG TTAGTTATGTAAACTTCCCGTACTTGAATCTGTATAATTTAGACCTCTCT TATTTCTAATCTTTTGAACTTTTGTTGTCTGATCTGTAGGTCCTCGTTTC AAATAATTGATTGCAAATTTTTGAATAGTTTTACTGATTTGATTTAGAAT TTCACCAAAGAAATAAAAAACATCACCAAATGGATTACGTGTTTAAAGAT TTCAACACTTTTCCACCTCTTTTCTTAGATGAAGAAACGACAGGATTACC TGCAGGATTCGGTACTCGCACATCCTCAATGTCACAACCGCGCGTACGAA AAATGAGCGCTGGAACGGGTGCACCAAGCTCTGTTCTATCTGGTAAGACT ACATGCTTTGATTTGAAGTTTTCTAAAGTCGTTAGGGGTGCTTGAGGTTA TGGATATGACACCCCCTTCTCACAGACCAACTGGGCTTCCTTCCCATCGG AAAAATTGTCCAAAATATAGTCCCCGGTAGAAAATTGTCCTCCAAGTTTT GTCCCTACTGAAAATAATCAAATAAAACAATTCTCATTGCAAAATATTAT GTTATTTTCCCCATCCCCACTGAATTATCTGAGTTGAAAACAAAAGAATT GAAATCCCCGGCCATAAATAATATGGGAATATCAATCACCATCCAGTTTC AGTCCGTTATTTTTATCCCACTGCTTGAAAACATTTCACCGGGTCTGTGA GAAGGGAAAATCTCTTCTTTTTTATCTATATTAGTTAGCTCAAACATATT ACAAACATTAAAGGTTCTTTTAGAAATGCGATCTGTAAAAGGTTTATCTT TTAACCTGTTCGTTTATGATCGTTGAAACTCATGCACAAATATTGATGTT GTTGACAGAGTCTTGTATGACAATAAACTTAACTATTCACTTTCTTATTA TCCAGTGGGTTCAATGTTTCACAAATTAGAAGAAAAACCGAAGGAAGACC AAGATGAAGAAGATGATGAAGATGTCGAATTAAAAGATTTATTATACAAA GAAGTCGAAGTCGAAACTGAAGCGCCCGCAAAAACACCTTCACCCAAACC CGCTCCCATTCGTGTGGTGGAGCCTGTCGCTAAGCAAGTCATTCAAACAA AAGAACGCGAAAACGAGAAAACCGCCTCCATTGATGCTGAAACTATCATT AAAGAAATGGAAGAAAAAACGAAAGAAAATGAGGAGCCGACCCCAGAGCC GGCACTAGCTGGTGCTCCCGTCTCTGTAGAGCCAGAACCAGTTAAAAAAC CAGAGCCAGTTGTTCTTCCCGTCTCTGTAGAGCCAGAACCAGTTGAAAAA CCAGAGCCAGTTGAAGAGTCAAAAGCGCCAGTTGCGGAGCCAGAAGCATC AAGTGACGAGACAGAAGAAGCAATTGAAGTCGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000752XLOC_000752Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001475-exon-sc0000010-1575043694:431082..431214TCONS_00001475-exon-sc0000010-1575043694:431082..431214Clytia hemisphaericaexon
TCONS_00001475-exon-sc0000010-1575043694:430414..430607TCONS_00001475-exon-sc0000010-1575043694:430414..430607Clytia hemisphaericaexon
TCONS_00001475-exon-sc0000010-1575043694:425439..425534TCONS_00001475-exon-sc0000010-1575043694:425439..425534Clytia hemisphaericaexon
TCONS_00001475-exon-sc0000010-1575043694:419475..419639TCONS_00001475-exon-sc0000010-1575043694:419475..419639Clytia hemisphaericaexon
TCONS_00001475-exon-sc0000010-1575043694:418633..418795TCONS_00001475-exon-sc0000010-1575043694:418633..418795Clytia hemisphaericaexon
TCONS_00001475-exon-sc0000010-1575043694:418034..418167TCONS_00001475-exon-sc0000010-1575043694:418034..418167Clytia hemisphaericaexon
TCONS_00001475-exon-sc0000010-1575043694:415973..416086TCONS_00001475-exon-sc0000010-1575043694:415973..416086Clytia hemisphaericaexon
TCONS_00001475-exon-sc0000010-1575043694:414932..415409TCONS_00001475-exon-sc0000010-1575043694:414932..415409Clytia hemisphaericaexon
TCONS_00001475-exon-sc0000010-1510915933:431082..431214TCONS_00001475-exon-sc0000010-1510915933:431082..431214Clytia hemisphaericaexon
TCONS_00001475-exon-sc0000010-1510915933:430414..430607TCONS_00001475-exon-sc0000010-1510915933:430414..430607Clytia hemisphaericaexon
TCONS_00001475-exon-sc0000010-1510915933:425439..425534TCONS_00001475-exon-sc0000010-1510915933:425439..425534Clytia hemisphaericaexon
TCONS_00001475-exon-sc0000010-1510915933:419475..419639TCONS_00001475-exon-sc0000010-1510915933:419475..419639Clytia hemisphaericaexon
TCONS_00001475-exon-sc0000010-1510915933:418633..418795TCONS_00001475-exon-sc0000010-1510915933:418633..418795Clytia hemisphaericaexon
TCONS_00001475-exon-sc0000010-1510915933:418034..418167TCONS_00001475-exon-sc0000010-1510915933:418034..418167Clytia hemisphaericaexon
TCONS_00001475-exon-sc0000010-1510915933:415973..416086TCONS_00001475-exon-sc0000010-1510915933:415973..416086Clytia hemisphaericaexon
TCONS_00001475-exon-sc0000010-1510915933:414932..415409TCONS_00001475-exon-sc0000010-1510915933:414932..415409Clytia hemisphaericaexon
TCONS_00001475-exon-sc0000010-1491911889:431082..431214TCONS_00001475-exon-sc0000010-1491911889:431082..431214Clytia hemisphaericaexon
TCONS_00001475-exon-sc0000010-1491911889:430414..430607TCONS_00001475-exon-sc0000010-1491911889:430414..430607Clytia hemisphaericaexon
TCONS_00001475-exon-sc0000010-1491911889:425439..425534TCONS_00001475-exon-sc0000010-1491911889:425439..425534Clytia hemisphaericaexon
TCONS_00001475-exon-sc0000010-1491911889:419475..419639TCONS_00001475-exon-sc0000010-1491911889:419475..419639Clytia hemisphaericaexon
TCONS_00001475-exon-sc0000010-1491911889:418633..418795TCONS_00001475-exon-sc0000010-1491911889:418633..418795Clytia hemisphaericaexon
TCONS_00001475-exon-sc0000010-1491911889:418034..418167TCONS_00001475-exon-sc0000010-1491911889:418034..418167Clytia hemisphaericaexon
TCONS_00001475-exon-sc0000010-1491911889:415973..416086TCONS_00001475-exon-sc0000010-1491911889:415973..416086Clytia hemisphaericaexon
TCONS_00001475-exon-sc0000010-1491911889:414932..415409TCONS_00001475-exon-sc0000010-1491911889:414932..415409Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000010supercontigsc0000010:414932..431214 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0.39996 0.0585568 0 0 0 0 0 0 0.398035 0 0.0100061 0.0998954 0 0 0 7.74018e-08 1.19575 0.0634852 0 0 1.79628e-05 0 0 1.47656e-08 0 0 0 0
Blast
BLAST of TCONS_00001475 vs. Swiss-Prot (Human)
Match: ICEF1 (Interactor protein for cytohesin exchange factors 1 OS=Homo sapiens GN=IPCEF1 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 8.160e-16
Identity = 42/111 (37.84%), Postives = 60/111 (54.05%), Query Frame = 3
Query:  534 VSCRALGKADHEGWMFKKAGGHGIVPVSWKKFWVVIKLGKIYCYKTSFNMQADYLFMVTDYSVDNATEKKKNFAFVLKPNEEDKKGVIFACETEQECNDWMGTINKILSGV 866
            +SC+ LG AD +GW++KK      +   WKKFWV++K   +Y Y      +AD    + D++V+ A+E KK  AF  K +    K   FA E  QE N W+   NK+ S V
Sbjct:   34 ISCKDLGHADCQGWLYKKKEKGSFLSNKWKKFWVILKGSSLYWYSNQMAEKADGFVNLPDFTVERASECKKKHAF--KISHPQIKTFYFAAENVQEMNVWL---NKLGSAV 139          
The following BLAST results are available for this feature:
BLAST of TCONS_00001475 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ICEF18.160e-1637.84Interactor protein for cytohesin exchange factors ... [more]
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