TCONS_00001394 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001394
Unique NameTCONS_00001394
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1983

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001394 ID=TCONS_00001394|Name=TCONS_00001394|organism=Clytia hemisphaerica|type=transcript|length=1983bp
AGATGAGATTAAAATTAGAgtgaaataaaaaatgcttGGTTTATCAAACA
CTGGTCATTCTTCAAAGTCTTCCAAAAATTCTGGTCCATCTGAAGAATTA
TCTGAATTGGTGTCATCTTACAAGAAGCAACGATCTATTGAACAAAAATC
ACAATCTGGTGCTGGTCCCAGTGGTTTGAACTTGAATTCATTAAGCCTCC
CATGGGAGTGTAACTTGGATTCAAATATTGTCATTAAAACTGAAAAGGAT
TTGCAACTTGATACAAAGGATTTTGGTTTGAATACAGAAACAGAACCTGT
TATTATAGAAAGCGTCCCACCCAGAGAATTTTTCCAgtggtacaaaatgc
ataattTCCACAGTGGTGAGAAAAACGCTGTTTCTTTTTCGTCAATGATG
ACGGACTCGACTTCTTACGAAGAACAATATCTTGGTCTCAAAATCTTCCT
TGCTGCCTGCAGTGCTTCATACAAGCGTGAATTATCAGCTATATTATTTC
ATGTCTATGTTCATTTTTATATTGATCTTGTTGCGAAACCTGATGTATCC
ACTGCTCAGACATTTTTAGAGAAGTTCCGCAATGACCATGAGGAGAATCA
CAAAGATGTGTTGCAAACATTACCAAAAATCACATTAAACTCACACATTG
CACATTATCCTCTAATACATGAATTACGTAAAAGCAAAATAGTACTCAAA
CTATCTCTTCATGTTTACAATTATTTTCTACAACATTTGAGACATGGAAA
TTTCAGTTTGGTTTTACAAACATTGAATAGATATTTTACCATAAGATCTA
GTAGTTCTTTCAACTATGGACATTATTTTAAAGACAATGAAAAGGAGAAC
AAAGACCAAACAGATGTTGTTATGGAAGAACTGAATGAACCCTATTGTTC
GTCAAATGAACAAAATGCAATAGATAGTTTGAAAGAATCTATTAGCAACA
TGGATAGATGTGGGAAATTGTTGAAACCCTCTATTTGTGTGTATTCCTTT
CACAACGCGCATCAAGGAATCTGCTGTAGCAAGTTTTCAAGAAAAGTCAG
TCATTTAGCAGCTGGGTTTGAAGACGCTTCCATTCGATTGATGAATATAG
TTTCTCAAACGAGGATTGAAGTAACACCCGATGaaaaaccattaaaagag
ACCTCATCATCCTCGTCACATACGAGTGACATGACTGTTCTTCGTGGTCA
TCAAGGTGCTATTTATCAGATcgctttcttccaaaatgatgATTTTATGC
TTTCTGCTTCTCGTGATAAATCAGTTAGACTATGGaacatacatcaaaag
aagaatCTAGTGGCTTACAAAGGACATGCGTACACTGTATGGGATGTTTC
TGTCAATACGGATGGAACGTACTTTGTGTCTGCGTCATTGGATAAAACAT
TGAGATTGTGGAATACTGAATATGCATGTCCGTTGAGGATACTGGCAGGT
CATGGTGACAGTGTCGATTGTGTAGCTTTTCATCCGAATGGCAATTACAT
AGCATCAGGTTCATCAGACAAAACATGTCGTTTATGGGATCTCCAAAGTG
GACAGTTTGTGCGTGTCTTTGTTGGTCATAAGGGACCAATTTATTCATTA
GCATTCAGCCCAGATGGAAAATATTTAACTTCAGCAGGTGACGACTCTGA
AATCAAAATATGGGACCTTGCCAACGGACAACTGTTAAACGAGTTCAAAG
CACATTCAAAAACAATATACAATTTAAGCTTCAGTAACGATGGTTCTATG
TTCGCTTCTGGAGGTTTAGACAAGACTGTCAAAGTATGggaaagtgaaaa
tatttttcgtaaaaaaaCAACTTCATTGTTCAAAATGGCAGACGAATGTA
TTGGTAGTTACCCTGTTGATAATATCAGTAGCATAttggacttgaaattt
tcggacgGTAACCTGTTATATACGAGTGTTCTATCCAACAGTGTCAGatt
ttttaagaaGTATTCAACACTAACGTGGAAATC
Run BLAST on NCBI

transcript from alignment at sc0000010:1028312..1035342+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001394 ID=TCONS_00001394|Name=TCONS_00001394|organism=Clytia hemisphaerica|type=transcript|length=7031bp|location=Sequence derived from alignment at sc0000010:1028312..1035342+ (Clytia hemisphaerica)
AGATGAGATTAAAATTAGAgtgaaataaaaaatgcttGGTTTATCAAACA
CTGGTCATTCTTCAAAGTCTTCCAAAAATTCTGGTCCATCTGAAGAATTA
TCTGAATTGGTGTCATCTTACAAGAAGCAACGATCTATTGAACAAAAATC
ACAATCTGGTGCTGGTCCCAGTGGTTTGAACTTGAATTCATTAAGCCTCC
CATGGGAGTGTAACTTGGATTCAAATATTGTCATTAAAACTGAAAAGGAT
TTGCAACTTGATACAAAGGATTTTGGTTTGAATACAGAAACAGAACCTGT
TATTATAGAAAGCGTCCCACCCAGAGAATTTTTCCAgtggtacaaaatgc
ataattTCCACAGTGGTGAGAAAAACGCTGTTTCTTTTTCGTCAATGATG
ACGGACTCGACTTCTTACGAAGAACAATATCTTGGTCTCAAAATCTTCCT
TGCTGCCTGCAGTGCTTCATACAAGCGTGAATTATCAGCTATATTATTTC
ATGTCTATGTTCATTTTTATATTGATCTTGTTGCGAAACCTGATGTATCC
ACTGCTCAGACATTTTTAGAGAAGTTCCGCAATGACCATGAGGAGAATCA
CAAAGATGTGTTGCAAACATTACCAAAAATCACATTAAACTCACACATTG
CACATTATCCTCTAATACATGAATTACGTAAAAGCAAAATAGTACTCAAA
CTATCTCTTCATGTTTACAATTATTTTCTACAACATTTGAGACATGGAAA
TTTCAGTTTGGTTTTACAAACATTGAATAGATATTTTACCATAAGATCTA
GTAGTTCTTTCAACTATGGACATTATTTTAAAGACAATGAAAAGGAGAAC
AAAGACCAAACAGATGTTGTTATGGAAGAACTGAATGAACCCTATTGTTC
GTCAAATGAACAAAATGCAATAGATAGTTTGAAAGAATCTATTAGCAACA
TGGATAGATGTGGGAAATTGTTGAAACCCTCTATTTGTGTGTATTCCTTT
CACAACGCGCATCAAGGGTGAGTTAGATGAAAAGGTGAAGTTTGATTAAT
TCCCTAGTCAGACTTCCAACGAATTGCAATAAGAAGGTGGActtcttgca
aaaaaaaacagaggAAAGTGGCTTAATAAGCATCTCCatttgattaattt
ttggaatatttttcatcCAGGACATTTTCACTTCAAAACTCTTGCTCGTT
GGATTTagtgaaaatgttttcaaagttCATGCTTTTGCCCTTATCCATTT
ACATTAGCCTTTTATCAAagcatttttttatttccacgcttattccaatc
ccctaTAAAGGTTTTCTGTTTGGTTAAGTTACTTATTTTCGGCTGTTTAG
GAAGCAAACGTTCAAATCTGTTGGGGTGATCCCTTACTCAAATTGAACGT
TTATTTCCACAATGGTGGAGTTCAGTAAATTAACAAAACATGAAGCACCT
CTCCGTTTCTGTATTATGATCGacattaaggccggtctccacttgcgcgc
gcttcaatcgcacttttcgagaaaagcttccacgctattggtcaaaagaa
aaatgaagcaactccattggtgcgatctgacgtaacggttgaaaaaagtt
gaaatgtgttcaacttttttttcgtgcgcacgctacatttttatgacgta
atcttttttccaagcaaaaaggattgaagccaaaaagtgcatttgcagcg
cgcgcaagtggagaccggcctttacatTTCGTGatcttttctattgtttt
gaaacaAATTATCTTCTCTTAGAATCTGCTGTAGCAAGTTTTCAAGAAAA
GTCAGTCATTTAGCAGCTGGGTTTGAAGACGCTTCCATTCGATTGATGAA
TATAGTTTCTCAAACGAGGATTGAAGTAACACCCGATGGTTTGTAATGTT
TAATAAATTCTTATCCTTCCATACCTTTGAGCACATATCCTTGTGATGCT
TGCTTTTAGCTTTAGCTTAAACTTTTAAATGTTCGCCTCCTTCATCGCTA
AATTCTTTGCCCCTGCACGTTTGAAATCAAGCCACTTGCTGCCTTCTATA
TAACAATGTAGTCCTCCCCACATGAGTGCACAACATTCTGATTTTGAGGC
TCATAGCATTACTCTAAATNATTTGACCTTTATCGTactaaattagagga
aaatcagAAATTCGTGATCATGGACTCGTACTAATAATTAGAGCTagata
aattatttcattttgccaaaataattaattcgtACTAATTAGAGGACGga
ttaaattagaagaatgacgGTACTCTAAATCTGGAAACTACTGTAGTTAA
AAACCCGATTTTATATGTGACAAGTCGCTCTTATCCAAAAGTAAGTACCT
TAAACAGTCAGTTAGAGTTTGGGGTGGGGGTTAGCAAGGGGGGGGGtgcg
aattttttaaaaattaaattctgaccactcccttattAGGATTCCAACCA
AGTGTTATTCTCAATTTTGAAGCAGAGTTTTCACTCTTCTAAACAGAGAT
TTGAATGCAAAATAAAtgaatcttttattttttcttataNAaattctgac
cactcccttattAGGATTCCAACCAAGTGTTATTCTCAATTTTGAAGCAG
AGTTTTCACTCTTCTAAACAGAGATTTGAATGTAAAATAAAtgaatcttt
tattttttcttatcctcagaaaaaccattaaaagagACCTCATCATCCTC
GTCACATACGAGTGACATGACTGTTCTTCGTGGTCATCAAGGTGCTATTT
ATCAGATcgctttcttccaaaatgatgATTTTATGCTTTCTGCTTCTCGT
GATAAATCAGGTAATATCAAATAAGGTGAAAGTTGTTTGTTTACAGTGAC
AAGTGCTCTACCAGGAGGAGCCTTAACAAGATTGAATgttgtttttgaat
ttcataACTCAGGTAATATGATGTTTGAATGTGATGAAGTTCTGTGAAGT
TTTACAATATTTTGTGTGGAAGCTTCAATCTTTcaaggggtaaaaagtta
ttcaaaaatcTCCAGAGGGTAAAAGACTGCAGTTTTCGTTCATCCACTGT
CACTTGTAGGTATGAAAAGGGTTTCTCCGAGAGTTTCTTTGCCAATGTTA
CCATTTTCAAGGGGGTATTTACACATTTCCAAGAATCTTATTTTTGGTTC
GCCCACCACGCCACCACCCCTATACAGTAtggatttttaatggaacagcc
catgaCATATAAGATTTTTCGGTTTgatattttataagaaattacTTCTT
CTTTACAGCNTTTCTTCCAAAATGATGATTTTATGCTTTCTGCTTCTCGT
GATAAATCAGGTAATATCAAATAAGGTGAAAGTTGTTTGTTTACAGTGAC
AATGTGCTCTACCAGGAGGAGTCTTAACAAGATTGAATgttgtttttgaa
tttcataACTCGGGTTATATGGTGTTTGAATGTGATGAAGTTTTGCAATA
TTTTGTGTGGATGCTTCCATAAAAGAAGACATCCATACTTTAAGCAGAGG
GGTGTAGCAAAAATTAGATACAGACAGACGTTCATTTCTTTAGATATGTT
AactgggccattccattttatattaATACGTAATGGGGGTAATCCAAGAA
GAATTTCTTGGGGGTCCGAAGGAGTATTTTTCAATCTttcaagggggtaa
aaagttattcaaaaatcTCCAGAGGGTAAAAGACTGGTTTTCGTTCATCC
ACTCACTTGTAGGTATAAAAAGGGTTTCTCCGAGGGTTTCTTTGCCAATG
TTACCATTTTCAAGGGGGTATTTACACATTTCCAAGAATCTTATTTTGGT
TCGCCCACTATACAGTAtggatttttaatggaacagcccatgaCATATAA
GACTTTTCGGTtccatattttattttaattacttcttCTTTACAGATAAT
CTTACTTTCCAATGTGCAATGAATTCAAGGAttgaaaatgttatcaaaat
gTAAATTCTATTATGCATATTTTTTCATACAGTTAGACTATGGaacatac
atcaaaagaagaatCTAGTGGCTTACAAAGGACATGCGTACACTGTATGG
GATGTTTCTGTCAATACGGATGGAACGTACTTTGTGTCTGCGTCATTGGA
TAAAACATTGAGATTGTGGAATACTGAATATGCATGTCCGTTGAGGATAC
TGGCAGGTCATGGTGACAGTGTCGATGTAAGTCTAAAAGCAAGtactttt
ttgctttagaatATTCCCCTTCTTCAAATCGTCGCATGAAAGTAAGAAAG
ccgtaaaaatttgaattaaagaaCTGTAGTTCAATTTTGTGACTTTCTGC
TTTTNTTCCCCTTCTTCAAATCGTCGCATGAAAGTAAGAAAGccgtaaaa
atttgaattaaagaaCTGTAGTTCAATTTTGTGACTTTCTGCTTTTTGGA
CTTACCCGAATTAACGGCCAGCTATCCAgccagccagccagccagccaag
cactttttcttgattttctgttCGTAAATGAatgtgtttaaaaaaattaa
atattccgATATTAATTGTTTTTCTTGTTCTAGTGTGTAGCTTTTCATCC
GAATGGCAATTACATAGCATCAGGTTCATCAGACAAAACATGTCGTTTAT
GGGATCTCCAAAGTGGACAGTTTGTGCGTGTCTTTGTTGGTCATAAGGTA
AATGTTCATCTTTGTGTTTGTGTTTGTGTTTGAATAACCAGAAgcttcat
gtttttgatgttgttaaaaagaaatattcgaCGCTCACTACAAGAGGTCA
TCTTCAGAgtaaaaaatctaataaaaaacgaaatcttttaaaaacaaatt
ttcaaaaatagtaaaaatagtgctaaaaatacaattaaaaACAATGCGGT
AAATGATAGAGAAGATACCTTAGggactaaaataattgaaacGTGCAAAG
AAAGTATTGAATGTGTTTTTATTGTTAATCATCGTTGTTGCTTTCGACAA
ACtatagtttttctgatttttgatgGGTGATCATTTCTATCTGAATGGTT
CGAGTCTGACTTCATAAAGCTTGATAGGCCGCCCCGACTTTAATACTTTT
GGCCAGTAATAGTAGAATACGTTTTTTATCAAGAAAAAGATGGATGGGCT
TTTCTAGAGAATTTCAGTAATTTCcgtaccccctgttgaggatatccgTT
TAAAGGAAATCACCCCTGGATGTCCAAGAAGATAGAGTAGATAGAAGGGG
AGAGGATATCcatcccctggatatccaggcattTTGTCTTGCCCATCACG
GATATCTGTGACGGGCAAGACAAAATGCctagatatccagggggtacatG
ACACCCCCTGTATATTCAGATATCATTGAACCCCACTGTTCGATATTACT
GTATTATATATTATTCTGGGAAAGCCAAATACGGTTCTTCTTCACTTTTA
ATCTACTGAATCGTATTTTCGTCCTATTTTGCAGGGACCAATTTATTCAT
TAGCATTCAGCCCAGATGGAAAATATTTAACTTCAGCAGGTGACGACTCT
GAAATCAAAATATGGGACCTTGCCAACGGACAACTGTTAAACGAGTTCAA
AGCACATTCAAAAACAATATACAATTTAAGCTTCAGTAACGATGGTTCTA
TGTTCGCTTCTGGAGGTTTAGACAAGACTGTCAAAGTATGggaaagtgaa
aatatttttcgtaaaaaaaCAACTTCATTGTTCAAAATGGCAGACGAATG
TATTGGTAGTTACCCTGTTGATAATATCAGTAGCATAttggacttgaaat
tttcggacgGTAACCTGTTATATACGAGTGTTCTATCCAACAGTGTCAGG
TAACATCCGGTTTATttctaagaacaattttatttatGTATACAGTATAT
ATGTATGTAAGGATTTTTAACAAATTGAATATCTGTTGGTATTACAAACT
AGATGGACTAATTCTTGTTATGTATCCAATACATATCATTAGTTTTATTA
CCGTATTTTGCTATAATTGATTTAAAACTTAATGAAATGTTTTCGTTCTC
ATTGTTTttcatttcgttttttttttctcgtttttcggtttgtgtatttg
ttttcaaattattttcgaattctGCTATAAGTTTCGAATGTATATTTGAA
TGCATCTGTAGTTgcaaaaaatatatcaaatccAAGGTATTAAAATAGAG
ACCAGTTCTTTTGTTTCTAATGTCCAGATTAATATTACGATTGATAAACT
GAAATAGACTTTATTATTGtgtatttgtaaagatttttttttgttaaatc
cAAGCTAAACTCTTGGtcaattttttataatatttaaaaaaagattattt
gtATATTTTGACATGCACATATTATTAGAGGAAACACattcaaatattat
tttattcccaatattattattattattatttcgaCTCAAATCTATTTACT
TGTTTACTTttctaatatttcaaaaagtcttGAACTTTGGAAACGTGCAA
ATTTCTGTTCTTCGCTGCTTTTTCTTATTGTATTTTTAAGATTCTTAAAA
TatcaacaaatcaaaaattcatcaGAAAATACTTCCTATTTTTGGTTTGA
GGAAACACAAATAACTGAAAGAATTGCCGAACGATATGTATCTTTgttgt
ttcgttttttttcataCATATTCAATACAAATGTattatgattattttta
taatcagAAGTGCATGCACGTTTTTTTacgagaacaaactatataagaac
ataaggcttcgagggccaaattgttaaaaacattttaaggctttgtagac
cctagaacacccaatttcttagaaaaatggacaaaaaactcaaaaactgc
tgaaaataagaacatattaagaacattattTAGGTTTGTAACCCGAAAag
taagaacatctgaaggcttcaaaaatttggatgttcttataaaaagaata
acGTGTACAGTAGCCCGTTCTTTTATTGTATGTTTCACGCTCAACCCTCA
ATATCCTTTAAATTAATcctttgatgttgttttttttctctttagatttt
ttaagaaGTATTCAACACTAACGTGGAAATC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000739XLOC_000739Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001394-exon-sc0000010-1491911889:1028312..1029328TCONS_00001394-exon-sc0000010-1491911889:1028312..1029328Clytia hemisphaericaexon
TCONS_00001394-exon-sc0000010-1510915933:1028312..1029328TCONS_00001394-exon-sc0000010-1510915933:1028312..1029328Clytia hemisphaericaexon
TCONS_00001394-exon-sc0000010-1575043694:1028312..1029328TCONS_00001394-exon-sc0000010-1575043694:1028312..1029328Clytia hemisphaericaexon
TCONS_00001394-exon-sc0000010-1491911889:1030084..1030199TCONS_00001394-exon-sc0000010-1491911889:1030084..1030199Clytia hemisphaericaexon
TCONS_00001394-exon-sc0000010-1510915933:1030084..1030199TCONS_00001394-exon-sc0000010-1510915933:1030084..1030199Clytia hemisphaericaexon
TCONS_00001394-exon-sc0000010-1575043694:1030084..1030199TCONS_00001394-exon-sc0000010-1575043694:1030084..1030199Clytia hemisphaericaexon
TCONS_00001394-exon-sc0000010-1491911889:1030981..1031121TCONS_00001394-exon-sc0000010-1491911889:1030981..1031121Clytia hemisphaericaexon
TCONS_00001394-exon-sc0000010-1510915933:1030981..1031121TCONS_00001394-exon-sc0000010-1510915933:1030981..1031121Clytia hemisphaericaexon
TCONS_00001394-exon-sc0000010-1575043694:1030981..1031121TCONS_00001394-exon-sc0000010-1575043694:1030981..1031121Clytia hemisphaericaexon
TCONS_00001394-exon-sc0000010-1491911889:1032294..1032487TCONS_00001394-exon-sc0000010-1491911889:1032294..1032487Clytia hemisphaericaexon
TCONS_00001394-exon-sc0000010-1510915933:1032294..1032487TCONS_00001394-exon-sc0000010-1510915933:1032294..1032487Clytia hemisphaericaexon
TCONS_00001394-exon-sc0000010-1575043694:1032294..1032487TCONS_00001394-exon-sc0000010-1575043694:1032294..1032487Clytia hemisphaericaexon
TCONS_00001394-exon-sc0000010-1491911889:1032845..1032958TCONS_00001394-exon-sc0000010-1491911889:1032845..1032958Clytia hemisphaericaexon
TCONS_00001394-exon-sc0000010-1510915933:1032845..1032958TCONS_00001394-exon-sc0000010-1510915933:1032845..1032958Clytia hemisphaericaexon
TCONS_00001394-exon-sc0000010-1575043694:1032845..1032958TCONS_00001394-exon-sc0000010-1575043694:1032845..1032958Clytia hemisphaericaexon
TCONS_00001394-exon-sc0000010-1491911889:1033746..1034110TCONS_00001394-exon-sc0000010-1491911889:1033746..1034110Clytia hemisphaericaexon
TCONS_00001394-exon-sc0000010-1510915933:1033746..1034110TCONS_00001394-exon-sc0000010-1510915933:1033746..1034110Clytia hemisphaericaexon
TCONS_00001394-exon-sc0000010-1575043694:1033746..1034110TCONS_00001394-exon-sc0000010-1575043694:1033746..1034110Clytia hemisphaericaexon
TCONS_00001394-exon-sc0000010-1491911889:1035307..1035342TCONS_00001394-exon-sc0000010-1491911889:1035307..1035342Clytia hemisphaericaexon
TCONS_00001394-exon-sc0000010-1510915933:1035307..1035342TCONS_00001394-exon-sc0000010-1510915933:1035307..1035342Clytia hemisphaericaexon
TCONS_00001394-exon-sc0000010-1575043694:1035307..1035342TCONS_00001394-exon-sc0000010-1575043694:1035307..1035342Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000010supercontigsc0000010:1028312..1035342 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
15.077	13.2871	4.18959	2.30523	13.7412	8.87282	6.81936	7.39335	5.62152	6.86178	5.24031	3.79441	4.41712	3.19578	3.80089	5.10842	6.30963	5.4886	2.24052	2.19041	4.54239	4.4236	15.6495	13.8645	4.81094	6.60045	3.56492	2.29965	11.2263	10.5926
Blast
[Close]
BLAST of TCONS_00001394 vs. Swiss-Prot (Human)
Match: TAF5L (TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L OS=Homo sapiens GN=TAF5L PE=1 SV=1)

HSP 1 Score: 304.679 bits (779), Expect = 1.214e-93
Identity = 179/541 (33.09%), Postives = 297/541 (54.90%), Query Frame = 2 
Query:  362 SGEKNAVSFSSMMTDSTSYEEQYLGLKIFLAACSASYKRELSAILFHVYVHFYIDLVAKPDVSTAQTFLEKFRNDHEEN--HKDVLQTLPKI-TLNSHIAHYPLIHELRKSKIVLKLSLHVYNYFLQHLRHGNFSLVLQ--TLNRYFTIRSSSSFNYGHYFKDNEKENKDQTDVVMEELNEPYCSSNEQNAIDSLKESISNMDRCGKLLKPSICVYSFHNAHQGICCSKFSRKVSHLAAGFEDASIRLMNIVSQ-----------TRIEVTPDEKPLKEXXXXXXXXXDMTVLRGHQGAIYQIAFFQNDDFMLSASRDKSVRLWNIHQKKNLVAYKGHAYTVWDVSVNTDGTYFVSASLDKTLRLWNTEYACPLRILAGHGDSVDCVAFHPNGNYIASGSSDKTCRLWDLQSGQFVRVFVGHKGPIYSLAFSPDGKYLTSAGDDSEIKIWDLANGQLLNEFKAHSKTIYNLSFSNDGSMFASGGLDKTVKVWESENIFRKKTTSLFKMADECIGSYPVDNISSILDLKFSDGNLLYTSVLS 1936
            SG  N VS +    +   YE Q+  L+ FL    + +  E+  +L+ ++V+ +++LV     ST ++F  +F     +N   KDV++ L    T+   ++++ L      +K V++L    YNY +++L+  N + + +  TL+ +  ++ +   +Y  Y   +   +++     +E  + P      + A++ L+ESI  + + G     +IC Y+F+N  Q +  ++ S     LAAGF+++ I+L ++ S+           +RI +  D    +E     +  ++M +LRGH G +Y   F  +   +LS S D S+R W++    N V Y+GHAY VWD+ ++    YF S S D+T RLW+ +   PLRI AGH   VDCV FHPN NY+A+GS+DKT RLW  Q G  VR+F GH+GP+ SLAFSP+GKYL SAG+D  +K+WDLA+G L  E + H+  I +L+FS D  + AS  +D +V+VW+  N +          + E +G Y    +S++L ++F   NLL  + ++
Sbjct:   52 SGCANIVSAAPCQAEPQQYEVQFGRLRNFLTDSDSQHSHEVMPLLYPLFVYLHLNLVQNSPKSTVESFYSRFHGMFLQNASQKDVIEQLQTTQTIQDILSNFKL-RAFLDNKYVVRLQEDSYNYLIRYLQSDNNTALCKVLTLHIHLDVQPAKRTDYQLYASGSSSRSENNG---LEPPDMPSPILQNEAALEVLQESIKRV-KDGPPSLTTICFYAFYNTEQLLNTAEISPDSKLLAAGFDNSCIKLWSLRSKKLKSEPHQVDVSRIHLACDIL-EEEDDEDDNAGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSGLIASASMDNSVRVWDIRNTYCSAPAD--GSSSELVGVY-TGQMSNVLSVQFMACNLLLVTGIT 583
The following BLAST results are available for this feature:
BLAST of TCONS_00001394 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TAF5L1.214e-9333.09TAF5-like RNA polymerase II p300/CBP-associated fa... [more]
back to top