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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00001367 ID=TCONS_00001367|Name=TCONS_00001367|organism=Clytia hemisphaerica|type=transcript|length=1685bp
aaaagaaagaaaaaaaacactttcatTTGGAGGGTGGGAGGTATATCTTT
TAGTGTATCATCATCTAAAAATAAGATTAAAAAGCACTGTaatgtttatc
aaaaagttgAGTGTTTCGCTCTAAAGCTGCCAAAAGTTTGATCCATTATG
GCGTGTTTGTGCATAAAAGTCTGTAGTTACACAACTGGTGGGGTTATAGC
TAGCAAGACAATAATGTTACTGtaactttttgaatatttcagAATTTGAC
TATGCCATCATGACTAAATatcttatttttcttgttttacaGATTTCAAA
ATCGTTCGAATTCATACAAAATGATGGTCTCGCAAACTAAAATTGTTCAA
TATTTCTACATTGTTTGCTTCATATATTTATTGATGTTCACTCCACCTTC
AAGCATGGTTCGCACTCGAAAATGCTGGAAGCGAAAATATACCGTCGAGG
TAGCTATGGAGGGAACTTTCTCAATGGCTTGCCGCCGAAACGTTACTCTA
CATAAATGCGAAGGATTTTGTCGTAGTGAGGCCGGGCCCGTAGTGGTCGA
CGATCAGGTCCGGTGGGAGATGAAGTGTAATTGTTGTCAGCCAAAGAACT
ATAAATGGAAGACGGTGAGATTTCCAGCTTGTGGAGCATCGAGAAGGATT
AGAGACATATCTAATTGTAAATGTATGCCGTGCTGAGGCGGGTTAACGAA
AGAGGTTAGAAAATGTAGTCATTTAAATGCATAAAATGGATTAGCTGGTC
CACGTGGAGCAAGATTGCATGATAAAACCctgaaaaaaaatgcaaacaga
cggacaaaatatcaaacaaaaatgTCACTATAATTAACAGCATATTATAT
ggtatattcaagatgacagtTACCCTAGATATACCAAACGGTCAAAACTT
TAACAAAATATGAACTGTAGTTTGTTTGGTGgcaaaatattaaaagaaac
aaagattataaaaatggaGTTGGTAGCTACAAGATTAAGAGAACcgttaa
agaaaaattcaataaaCTATCAAAGAAATCAAGTCATTAATGTGACTGCT
AAATTAAACAGATCCCAAAATATTAGGTTCGTCGTGACGAGCTCGACAAA
TGAAAACACGAAAAAGCAATTCGCTTTTATCGATAATTTCCATACTATTT
AAAACAATCCAGAAGCTACTATTTGGCGTGGTATGGAGAAATTCTTAATG
CTGGAACATTGAAACATTAAAAATAAGCCTAAAGTGAAGACGACAAAGTT
GAACAGAATTTATCCGttaaaatactaacaaaaactctttatttttttta
aactttcgttttttgaaaatatgattaattaaagaaagtttaaaagaaaa
tcataGGAAAAACGAAATATTATACACTTATCAACCCTAACCTCAAGAGG
AGATTGGGCTGGAAATCTAATAGTTCGAGTTTTATTGAATAACCTACTGT
AGTGACGTCATTATTCAAAGAATACTTGAACCCATTCTCCTTAAGATGTT
AGGGTTGTGTTAAGTGTATCTAGCTGTGAATTATTTGGTTAAAATTAAAG
CATTCTCACCCCTTTCCAAACATACATTATAACATAAattgaaattatta
ttattatatttaatATATATGTATATTATGACgctctttattttatttat
tctttaaaatttcttaaaaaaataatatcatgaag Run BLAST on NCBI transcript from alignment at sc0000010:678874..680558+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00001367 ID=TCONS_00001367|Name=TCONS_00001367|organism=Clytia hemisphaerica|type=transcript|length=1685bp|location=Sequence derived from alignment at sc0000010:678874..680558+ (Clytia hemisphaerica)
aaaagaaagaaaaaaaacactttcatTTGGAGGGTGGGAGGTATATCTTT
TAGTGTATCATCATCTAAAAATAAGATTAAAAAGCACTGTaatgtttatc
aaaaagttgAGTGTTTCGCTCTAAAGCTGCCAAAAGTTTGATCCATTATG
GCGTGTTTGTGCATAAAAGTCTGTAGTTACACAACTGGTGGGGTTATAGC
TAGCAAGACAATAATGTTACTGtaactttttgaatatttcagAATTTGAC
TATGCCATCATGACTAAATatcttatttttcttgttttacaGATTTCAAA
ATCGTTCGAATTCATACAAAATGATGGTCTCGCAAACTAAAATTGTTCAA
TATTTCTACATTGTTTGCTTCATATATTTATTGATGTTCACTCCACCTTC
AAGCATGGTTCGCACTCGAAAATGCTGGAAGCGAAAATATACCGTCGAGG
TAGCTATGGAGGGAACTTTCTCAATGGCTTGCCGCCGAAACGTTACTCTA
CATAAATGCGAAGGATTTTGTCGTAGTGAGGCCGGGCCCGTAGTGGTCGA
CGATCAGGTCCGGTGGGAGATGAAGTGTAATTGTTGTCAGCCAAAGAACT
ATAAATGGAAGACGGTGAGATTTCCAGCTTGTGGAGCATCGAGAAGGATT
AGAGACATATCTAATTGTAAATGTATGCCGTGCTGAGGCGGGTTAACGAA
AGAGGTTAGAAAATGTAGTCATTTAAATGCATAAAATGGATTAGCTGGTC
CACGTGGAGCAAGATTGCATGATAAAACCctgaaaaaaaatgcaaacaga
cggacaaaatatcaaacaaaaatgTCACTATAATTAACAGCATATTATAT
ggtatattcaagatgacagtTACCCTAGATATACCAAACGGTCAAAACTT
TAACAAAATATGAACTGTAGTTTGTTTGGTGgcaaaatattaaaagaaac
aaagattataaaaatggaGTTGGTAGCTACAAGATTAAGAGAACcgttaa
agaaaaattcaataaaCTATCAAAGAAATCAAGTCATTAATGTGACTGCT
AAATTAAACAGATCCCAAAATATTAGGTTCGTCGTGACGAGCTCGACAAA
TGAAAACACGAAAAAGCAATTCGCTTTTATCGATAATTTCCATACTATTT
AAAACAATCCAGAAGCTACTATTTGGCGTGGTATGGAGAAATTCTTAATG
CTGGAACATTGAAACATTAAAAATAAGCCTAAAGTGAAGACGACAAAGTT
GAACAGAATTTATCCGttaaaatactaacaaaaactctttatttttttta
aactttcgttttttgaaaatatgattaattaaagaaagtttaaaagaaaa
tcataGGAAAAACGAAATATTATACACTTATCAACCCTAACCTCAAGAGG
AGATTGGGCTGGAAATCTAATAGTTCGAGTTTTATTGAATAACCTACTGT
AGTGACGTCATTATTCAAAGAATACTTGAACCCATTCTCCTTAAGATGTT
AGGGTTGTGTTAAGTGTATCTAGCTGTGAATTATTTGGTTAAAATTAAAG
CATTCTCACCCCTTTCCAAACATACATTATAACATAAattgaaattatta
ttattatatttaatATATATGTATATTATGACgctctttattttatttat
tctttaaaatttcttaaaaaaataatatcatgaag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00001367-exon-sc0000010-1491911889:678874..680558 | TCONS_00001367-exon-sc0000010-1491911889:678874..680558 | Clytia hemisphaerica | exon |
| TCONS_00001367-exon-sc0000010-1510915933:678874..680558 | TCONS_00001367-exon-sc0000010-1510915933:678874..680558 | Clytia hemisphaerica | exon |
| TCONS_00001367-exon-sc0000010-1575043694:678874..680558 | TCONS_00001367-exon-sc0000010-1575043694:678874..680558 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000010 | supercontig | sc0000010:678874..680558 + |
Blast
The following BLAST results are available for this feature:
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