TCONS_00001332 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001332
Unique NameTCONS_00001332
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3218

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001332 ID=TCONS_00001332|Name=TCONS_00001332|organism=Clytia hemisphaerica|type=transcript|length=3218bp
catcaaataGCCGATAGGAAAGTATGTGATAAATGCATATTGTTAATCCT
GTAACATGAAActaattgagaaaaaatctgtATAGTTTTGTCCTgaaatc
agttttttttatgACGCAGCAAGGAGAATATGGAGGCATCATAAATATAT
CGTTGGAGAGAATaattaaaatcagaaaaaaataaactcAGTTTTGGTAT
TGGGCCAAAGCAATTAAAAGCACCTGCGGAAAGACTACTGTTACAAAAAT
GGTGTTGAAGAAACTAATGAACTGGGCTGGCCAAGCTAAAGATTACATCC
AGGATGGTTTATTCGGTATTACTGATATCGAGGAAATACCTTTACAACAG
AATCCGCAATCTCCTAGTCAAAAACGGATTCGAAAAAATGTCATGTTTTC
AGCAGGGAAGGATAAAACAAAGCTTGAAAATGATGGCCCAAACATTATAT
ATGACTTTTCTGATTATGACAATAAACGTAACAAAGCTTATAAGGTGTTA
CGAAAAGGTCCTTTAGAGTTCCCAGAAGATCATCTGGAGTTCGAGCATCT
GTCGAGTTTTGCAGTATTACAGGAATATAATGATACGTTCGTAGAGTTTT
CAGATAATGATATGGAGGATGGGAATATTTTTCCGAGCAGTAAGATGTTG
ATCTCGTATTTTGCAAGGCTTGGAACAGGCGAAGATGATGAAGCTACTAT
TAATCTGAATTTCATACAAAATCTCATCGACGCTGGTGCTAACATCAATC
AAGAGGATGCGTACGGTCAAACTCTATTCTTCTCTATCGTAAGAGACTGG
AACACAGATGTGGCGGAGTACGCCCTCACAGAAGGGGCGCATATAAACCA
TGCGGACCATTATGGGCGTACCGCCTTACACGTTGCTGCCTCAATAAATT
ATAAAGAAATGGTTGCATTTCTTATTAAGAAGGGAGcaaaagttCACGCG
AAAACAAGAGGTGAAGAACAAACTCCTTTACATTATGCTGCCAAATATAA
TgctgctgacgtcatcgaaatTCTGATCAGTAATGGTGCAGTCGATGGAT
TAGATTTCTTGAATCGAACGCCTTTTCATTTGGCTGTTGAACATGGATGT
GAAAAATCATCAGAAATCTTCTTAAAGCTTGGTGTACCAGCTGGggaata
tgatatttccaaccAATCAGTTATGGCATTGATAGTGGACCGATTACCGA
ATCTTGGTTATCAATGTTTAGACCAGTTCATGACCACAGATGATAGTGCG
TACAGTGCATTCTTTCTGGCACATTTAGAAGGGAATATCAAAGGATCATC
AGTGAGGGGACAAACAGTTCTTCAGTGTATTGTCAAGAATAATAACGAAG
AACTGATCATGCATCCAACCATTCAAAAGCTGCTCAAAATCAAACTAGAT
TTGTTCGGACGAACTCATGTTATTATGTCTAACttgttgaatatctttta
cGTTTTATTGGCAACTGTGTTCATCTTTTCGGTGCCGTATGATAGTTTTG
ACAAACAATTTGTACCGTTCGAAACACATGTTTGGAAAATATGCGTTGGT
GTTgtcttttgtttcttgtctATCGTTTACATATGGCGGGAtatcaaact
tttattgatactAAACAAAGAAGACGAGGAGTACAAAAAAGACATGCTTA
GGGTTTACAAGAAAATGGAGCAGTATTGTCATCCTGCATGGAAAACAGAA
AGCGAATTTGTTGATCGGGAAAAGAAACGGCTTGAAGAAAGTCGAAAATC
GTTCTTTTATGACGGATGGCAGTGTTATGAGCTCGTTGTAACTTTCACAT
CGTTTGCAATCATTGTAATGTATTTAGTGAACGTGCTGACTCCAAACAAG
ACCTTATTTACTGTCTTCAAATATTTGGCTTCTGTTAACCTATTACTTCT
TTGGATGAGGTTATACAAAACAATGCGACTTAGCAAAATCTTCTCCGAAG
TTGAAATGTTATTAGTTCATATCTTAAAGACTGTGGCGAAGATAGGAACA
TTATATTTGGTATTGCTGGTACCATATACTTTCGTTGTTTACATGCTTTT
TGGTGGGTCTGGTGATGAGGATGTCAGAATCACCAAGACAACAAAAGAAT
ACGAAGTTGCCCAAATTatttatGATCTATACCATTCAGCCGTTGTTACA
CATCACGAAATCAATGAGGTTGCAAACCAAATCTTCCGTGGTTTTTATTT
ACTCATGTTTGCAATTATCAATTTCGTTTTCATTGGTGTTATGACGGAGC
AATTTGTGCGCACGTACAAGAAAGCACTTGCAAAAGTCCACCTCGGAGTA
GCAAATGCGTTGATCAATATTGAATTAAGAAGCAGTCATGATAAAAGAAA
AGGATACAGAAAATTTATCAGAGAGAAATGCAATCCTTACTTGGAAGAAG
TATTTGGTAAAGAACGCCATTACAGAGAGGATCGAAATGACAAATACATC
AATATCAGCGTTGGCAGTGTATCAGAACTGTCGGAAAAACTCTCTGACTA
TCTCGaTGATGCCGACTTTCTAAATCAACCACAAAGGTCTTGTGATATTG
ATTGTTTGCAGAGTCTTCAGGTAGAGTTGGAACGCCTCTCGGCAGACATG
AATTATGGCAAAGCAGGGTTACAGTTGAAATCGAAAGAAGTATTGGCGAA
AGCCAATAAATCGGCTGAAATTATTAAAGCAGGTTGTGATCCACGGCATC
TAGCAAAAGGAAAACATCTATCCAAACCAAAACAATGAAGATAATCTGGA
ATCTTCTGAAAAGGTTCCGTTCCATCAGATACGAAGGGTCAAATAGGAAT
GATCCAGCTCCATTCAAAGTTAATGCCTTGCTGCCATTTTAATGGTTAAA
ACGTAGTTCATAGATGTTGAAATCTTCACAACTAACTCACTTACTAAAGA
GACTTCAAAGCGAAAACGACAATAACAGAACATCAAAAGATAACTTTATT
TTAAACTTTCTCCGATAAATTTTGTCTTGACTATCAGACAATCTTATTTT
ACGAAAAAGGGTCTAAGCCTATCTTTGGCTTTTGGTTGCTCTGGACTCGA
TCTAGACTCATAAGAATAAATCCATTCTACCTCCCCCACCCTCTGCCGTT
AAGAAATACGGGGAATGTGATAATCGAACAAGTTTATTCAGTccaaacca
ttgagtttaaagcgcgaagggctagagtagaatctctaacatTTATAAGG
CAAGATAAAGTGAAGCCA
Run BLAST on NCBI

transcript from alignment at sc0000010:155949..170280+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001332 ID=TCONS_00001332|Name=TCONS_00001332|organism=Clytia hemisphaerica|type=transcript|length=14332bp|location=Sequence derived from alignment at sc0000010:155949..170280+ (Clytia hemisphaerica)
catcaaataGCCGATAGGAAAGTATGTGATAAATGCATATTGTTAATCCT
GTAACATGAAActaattgagaaaaaatctgtATAGTTTTGTCCTgaaatc
agttttttttatgACGCAGCAAGGAGAATATGGAGGCATCATAAATATAT
CGTTGGAGAGAATaattaaaatcagaaaaaaataaactcAGTTTTGGTAT
TGGGCCAAAGCAATTAAAAGCACCTGCGGAAAGACTACTGTTACAAAAAT
GGTGTTGAAGAAACTAATGAACTGGGCTGGCCAAGCTAAAGATTACATCC
AGGATGGTTTATTCGGTATTACTGATATCGAGGAAATACCTTTACAACAG
AATCCGCAATCTCCTAGTCAAAAACGGATTCGAAAAAATGTCATGTTTTC
AGCAGGGAAGGATAAAACAAAGCTTGAAAATGATGGCCCAAACATTATAT
ATGACTTTTCTGATNAGATAAAACAAAACTGGAAAATGATGGCCCAAACA
TTATATATGACTTTTCTGATTATGACAATAAACGTAACAAAGCTTATAAG
GTGTTACGAAAAGGTCCTTTAGAGTTCCCAGAAGATCATCTGGAGTTCGA
GCATCTGTCGAGTTTTGCAGTATTACAGGAATATAATGATACGTTCGTAG
AGTTTTCAGATAATGATATGGAGGATGGGAATATTTTTCCGAGCAGTAAG
ATGTTGATCTCGTATTTTGCAAGGTAAGTGCTTTAAATTGGTAGTTTTAG
CCCAAACAGCTTTCTTTGGAATCTCTTGGGTTCcaataaacggggggagg
taagttggaaaattttcgagatttaaTAAACAGAGGGGACTAATTGCCGG
GTGGTTGGAAATAGTActttgaaaacccaaaaataaggtaaatataggct
aaaatcaggctatttagagcaaaataagagacctctttgacagctgaaat
tattcttaaaaattaacaaaCGGGGGGGGGGAGTTTATTTGAAACCTAAG
AGTACCGTGTCCGCCACTGTACTGTTTTAGAGGATGTCATGGGCAGTTAA
GGTATGATAACTCAAAAAAGTCACAAACTTACAAATGTTGACCAATGATT
TTGGTAAACATAGATTCACAATCTAGCTAAGTCTACTATCACTGATTCTC
ATTTACATTTTGCGAATGCAGTTAAACGTAAAGGATTTATGGAGACTTAT
CTTTAATACCCAGACTTTAATTTTTCTGTTAGGCTAAGCAGAGGATCTCC
CATTTTACACACAACCTTGAAATGCTTATTTTAATAGTGagccaattttt
ttcatttcaacacAGGCTTGGAACAGGCGAAGATGATGAAGCTACTATTA
ATCTGAATTTCATACAAAATCTCATCGACGCTGGTGCTAACATCAATCAA
GAGGATGCGTACGGTCAAACTCTATTCTTCTCTATCGTAAGAGACTGGAA
CACAGATGTGGCGGAGTACGCCCTCACAGAAGGGGCGCATATAAACCATG
CGGACCATTATGGGCGTACCGCCTTACACGTTGCTGCCTCAATAAATTAT
AAAGAAATGGTTGCATTTCTTATTAAGAAGGGAGGTATGCTCGTCCTGGC
TTGAGAAacctattttaatttttatatctttgtttgagttgaggaaattt
cgagtttaACCCTTTAAGAGCCACGGTcttatttttcttactttttaagt
tttttaagaaaatcgctatttcaaactttaaaggcttatatctccgaaTC
CAGAatgagttagaagctcgttcatAGCTCGCTCGTTGAATAGCTTAGAA
TTTAGTTTAGAAGTTTAGGCTCCATCGGGAAGGGCGGACTGGGCGGAGGC
TaaggggggggtaggttaggggaATAAAGCAgtctgcgcggacctgactg
aatgatggaaagtagaaaggtgcccagtggtacaacttcaaatcaaaagt
aaaacagggccaaatttgaaGGTTCTATGATCACTCgagtcaaaatctca
aaaaagtggatttttgtcaaatttttgcatttctttgAACTTTTGGTTTA
AAATCTCGCTgtgaaaactcatttttgaacatttcttgcttgaccatgaa
gcgcAATCCAATTTCtatacgagttagaccaaaaatgaggatttctaact
caaactggacATTTCAGGAGGGCTCCGCCgaaatttattcaaatatacTT
GGCACGGAAAGGGTTGAGTTAGTGAAGATAGCAAAGAGTTTATGTATCTT
GTATTTCAATTGGTGCGGTAGCTAGTTTTTTATTTGTCCTTGAACCTTGT
TGGACTTTGCCCGTACCAGGTGACAACTGCTTTTTTCTCGGTACCGTTCA
GAGATACGGATTGTTCAAGATCGCTTCCAGTCATTTACTGCTAGACAGAT
GAGTCTTTATATGTAGTCCGAATACGTTAAAGGGATAAAATCGAGGAAAA
ATTCTGTGGGAATTAGTTCATCTTATCTGCCTGACCAAGTAAGAGGAAAT
CAATCGAAAAAGCTCTAAATTCCGTTATCCAAGAATTcttcaaaatctca
aaagtcCCAAAGATGCATTCTCATACGCAATTTGGAAGTGATTTACCAGT
GACATATATGACAGTGCAGAATATGTttctttttcagcaaaagttCACGC
GAAAACAAGAGGTGAAGAACAAACTCCTTTACATTATGCTGCCAAATATA
ATgctgctgacgtcatcgaaatTCTGATCAGTAATGGTGCAGTCGATGGA
TTAGATTTCTTGAATCGAACGCCTTTTCATTTGGCTGTTGAACATGGTTG
GTAACGAATTCTTTTTCTCCCCTTGATCTTCACAATGCTTGATAATTGCT
CGCcattgtccctgggacaaaatcagcgtgtcttttgggtatttcccaca
ctttttgtcccatgaaacaaaaatgaaaccatgggacacgcactttcttt
cttgtgttggtgggatggagcatgttgcattgcacaaaCGTGAAAATAAC
TTCTCGTAGCCTGTCGGCTGCAAAATTTGGTCTAATGCGAACCTTTACTA
ATTGATACTTAAACTAAAACATTTGTCCTCTCAATTGGAAAAGTCATATA
AAacactttctataatttgaatttttccataattcgaaGAAATTCATTGG
TCTCTTCaaaatcgaattatagagagatgTTCGACTGTATTTTCCCTGTA
TTCTGTTGATTTGCATAGAGAACTCGTGTGTTGCGAATCATCACTTTAGA
TTTATATCCACTGAAGAGATCTCGTCGTGTCTAAAAGcactaaaatttga
taaataccGTAAAGCGGGCGTAGTTTTTGAGGTCGATTCGCTTTCCTTAT
TTTCACGGTATTCGTGGCGCGTTTTATACGGAAAGCACCTAAAAAGACCC
GGTTTCTGCCActagttttgaatttaaacaatacaACTATAGTGGCAAAC
TCCTGGACTGTTTTTAATGCTTCcaaataaaacattacgtcatgaatacc
aggaattcaaaacaaaattatttcaagaAATTATTTCGAAAATACTGTAC
AAAATTCTCAATTTGTGATTCTTTACAGGATGTGAAAAATCATCAGAAAT
CTTCTTAAAGCTTGGTGTACCAGCTGGggaatatgatatttccaaccAAT
CAGTTATGGCATTGATAGTGGACCGATTACCGAATCTTGGTTATCAATGT
TTAGACCAGTTCATGACCACAGATGATAGTGCGTACAGTGCATTCTTTCT
GGCACATTTAGAAGGGAATATCAAAGGATCATCAGTGAGGGGACAAACAG
TTCTTCAGGTAATTTAAGTTTAAGTCAACTATTAGATTTAAGGTGAAAAT
ATAGCATGTGTGTCTGCCTGCGTATCTTGTTGTTTTGATGTGAAAGATTG
TAAATCCTAACACCCCGACATCCACAATTTTAGGTGAGATAGTTATCATT
ATCCTGACCCAACATTTGAATTAACTTGGATTATGTTTTCAAAACACATG
GAATTgactattccagaaatagtttgGACCCCCCTATGTTGAGAAGGTGT
TGGCGTCCAGGGTggtctttcaaataaaaaacccAGGGAGCCTAGTTTTA
AAATGAGTTAGAGTGTAAAAATCCAGAGTTgtcagtaaaacgaggtcgag
aaaatagacaaaaaatctAAGAGAgtcctaaaaaattgaaaaaaaatcca
gggatcacctttcccaaaaaaagacctcctcaacatagggggtacaattt
ttttctggaatagcccaatgatCTTTGGGTTTTGTCTTCATCTTCCTTTC
ACACAACCATACTGATTTGGTTGTATGAATCACACTTGACTCTGGTCAGA
AATTTTTCATCCCTTTCTTATAACAGTGTATTGTCAAGAATAATAACGAA
GAACTGATCATGCATCCAACCATTCAAAAGCTGCTCAAAATCAAACTAGA
TTTGTTCGGACGAACTCACGTTATTATGTCTAACttgttgaatatctttt
acGTTTTATTGGCAACTGTGTTCATCTTTTCGGTGCCGTATGATAGTTTT
GACAAACAATTTGTACCGTTCGAAACACATGTTTGGAAAATATGCGTTGG
TGTTgtcttttgtttcttgtctATCGTTTACATATGGCGGGTAAGTGCTG
CACGTGTTCTTGAAATAATTAAACTTTGGTTAAGAAGTTTcgtaaaatca
gtgtttttcatttgtaattatGCGTAAATCTGATTAATCGCGATAGTAGG
GTTCGATTTCCTGATCTTTCTggtttgatttcccgatttggtTTGAGTTT
GCGCTCGCTGACCACGATGAAGATGTTTGCATAATGGTTCACTATTAAAA
AATANTTCAAATAAAAAACCCAGGGAGCCTAGTTTTAAAATGAGTTAGAG
TGTAAAAATCCAGAGTTgtcagtaaaacgaggtcgagaaaatagacaaaa
aatctAAGAGAgtcctaaaaaattgaaaaaaaatccagggatcacctttc
ccaaaaaaagacctcctcaacatagggggtacaatttttttctggaatag
cccaatgatCTTTGGGTTTTGTCTTCATCTTCCTTTCACACAACCATACT
GATTTGGTTGTATGAATCACACTTGACTCTGGTCAGAAATTTTTCATCCC
TTTCTTATAACAGTGTATTGTCAAGAATAATAACGAAGAACTGATCATGC
ATCCAACCATTCAAAAGCTGCTCAAAATCAAACTAGATTTGTTCGGACGA
ACTCATGTTATTATGTCTAACttgttgaatatcttttacGTTTTATTGGC
AACTGTGTTCATCTTTTCGGTGCCGTATGATAGTTTTGACAAACAATTTG
TACCGTTCGAAACACATGTTTGGAAAATATGCGTTGGTGTTgtcttttgt
ttcttgtctATCGTTTACATATGGCGGGTAAGTGCTGCACGTGTTCTTGA
AATAATTAAACTTTGGTTAAGAAGTTTcgtaaaatcagtgtttttcattt
gtaattatGCGTAAATCTGATTAATCGCGATAGTCGGGCtcgatttcccg
atctttctggtttgatttcccgatttggtTTGAGTTTGCGCTCGCTGACC
ACGATGAAGATGTTTGCATAATGGTTCACtattaaaaaataacaattaac
ggagtttgcagccgtcattacggctgttttatttttttgaatcccTGGta
tccatgacgtaatgtttggAAGCATAAGAAATAGTCTGGGTGTTTGCCAC
TAGTTGtcttgtttaaattcaaaactagTGGCAGAAACCTGGTCTTTTta
ggtgcttccgtataaaacattatgtcatgaatatcatgaaaataAGGAAG
GTGAATCGACCTCAAAAACTACGCCCGCTTACCAAATTATATTTGCAAAG
CAGGTTTTTTTAGCAGGGGATTGTTGACACCATTAAAGCTTCAGTGATGA
AGGATCTTATCCCTTAAATGGATTATATTTCGCACGGAttaattttcact
aatttttgccgtttttgcgaAACTTTATAAAAAGGCAAAATAACGTGACA
TTATCTCATTGGAAAAAATctgttcgagttacggagacaTTTAAAGCGTT
AATTTCAATTGtatctttattttattcattGTATGCACCATCGCAAGGTC
TTCCAtgaacccaacagctgattggttgaaagtgacgtattgactgattt
tacgtcacttacaaccaatcggctgttgggtctgtgatgtaatgtcagaa
gacattgcaatggtgcatatcatgaataggatATCAATTGATCATGTTCA
TGTCTCGACTAATACCCTAATACCCTAAGCCTTGACACATTGGAACTGCT
TTCCAGGCTGGGTCACATGGGGTCGATTCCCTTGTGTTTTGTCCTACGGG
AAATTAGTTTTTCAAACCAAGTATCTTTATTTTATAGGAtatcaaacttt
tattgatactAAACAAAGAAGACGAGGAGTACAAAAAAGACATGCTTAGG
GTTTACAAGAAAATGGAGCAGTATTGTCATCCTGCATGGAAAACAGAAAG
CGAATTTGTTGATCGGGAAAAGAAACGGCTTGAAGAAAGTCGAAAATCGT
TCTTTTATGACGGATGGCAGTGTTATGAGCTCGTTGTAACTTTCACATCG
GTAAGTAAAATACACTTTCGGCCGTAGtcgtgcgggcatttttttgtctg
ctTTATCCCATTTAGCCTGTTAggcgaaaaccgcttttttatcgcgattt
aactgaccataaaacaaagaaaaaatttggtttgtgggaaggtactggct
atATCCCAttaaaaccgtcccaatccttttttgacgcatttttctattgt
ctataggtgcgaaaaaaggactgggatggttttagtgggataaattGGAC
AAAGAATGCCTGCGCGACAAtcggtggctacggtcgaaaaggtgtataca
aTGTGTCCATTTTGTCAATGATAGTCATTTTTGAGGGCtgtagtttttta
tttaaattattCAAAGATTTAACCTTTCAAGCGCGcaacattttataaaa
aatgtgatAATATCCACCTTTTTTGtaatccaaaatttcaaactggcATA
AAAGCTTGTACCTTGAGACAATAAGAcaatggttttggtaccatttgaaa
ggtatttttatactctttctaaaagcattcAATTCATGCCCTTTAAAATC
TAGTTTTCAGGGGTTGTAGCCTGTCACGTGTCAtgtcacgtttatcgctt
catAGTACAATGAAtttacggcaatgaattttgaaattagccgtagatat
caggtctgtgtacagacaataaGTCTGGGACTCGGTATATTTCCAAATTT
ATAGATCGTGTTTACAAGTTTCTTTGATTGGAAGGGTTAATAAGGTTAAT
CATCTACTCAAATTACCTTTCCAACGAGAAATGTAATAACATTCACTTTT
GCAGATATAGTCCATAAGCTGAGGGTCAAAATGGGCTCGATGAGTTTACT
GAATAAATTTTATGTAACATTGAAACTTCCATGTTAGCAAGGTACAATGT
GCCATCATATGGAATTGCCCCAATTGTTAAGATNTTATGTAACATTGAAA
ATTCCATGTTAGCAAGGTACAATGCCATCATATGGAATTGCCCCAATTGT
TAAAATTACCAAACCTACTTTTACAATACACCCAACATCACACAATATCA
TTTCACTCTTTGTTTTCAGTTTGCAATCATTGTAATGTATTTAGTGAACG
TGCTGACTCCAAACAAGACCTTATTTACTGTCTTCAAATATTTGGCTTCT
GTTAACCTATTACTTCTTTGGATGAGGTTATACAAAACAATGCGACTTAG
CAAAATCTTCTCCGAAGTTGAAATGTTATTAGGTAAGTGAAATTCATAAC
TTAAGGGCTCTGTTCATAGTCAGAAGATTAAGGgttttgaagataaaact
ttttattttggttccttgatacttttgataaaaactgTCTTTATAAATTG
TTTGGTAATAATTGCCAGGAgtaattgaaaatttaattacaaaaattacg
CTATGAActataaaagttcaaaaaatgtgtgttaAGTTAAGGGTgattaa
tatttttctttcaaatttttttttgaattgtcaacaaagaattgaactat
ttgaaattttcagaaatttttctaaattgatgtatcaagaattatgactg
tttttctacgaaaaattgggatgaaaaatttgtcaaaagccactattttc
aagattttgagacaaagaagctttaTGAAAATCCATTTTCAGTTTAGTTA
TAGATCAGGCAGAAATCTATATTTTGAACATGGCataaatgaaaaattca
ctatggtcagaggcCTAAACTTTagggaaaataaattttaacgaACATAA
CAGTTTATACAGTATATCTTTTCTTGCGTCTGTTTGTACGACACATTTCA
TATTTAAGGGTTGAATGCCAATTTGGGAAATTAGCCTCGCTAGAATGTCa
atattcattttcatttaGTTCATATCTTAAAGACTGTGGCGAAGATAGGA
ACATTATATTTGGTATTGCTGGTACCATATACTTTCGTTGTTTACATGCT
TTTTGGTGGGTCTGGTGATGAGGATGTCAGAATCACCAAGACAACAAAAG
AATACGAAGTTGCCCAAATTGTAAGCTAAATCCTAAAAGCTCCATTTTTT
CTAATCAATTGCCAGGCTAAATGACTGTATCGAAAGTTACAGCATCTAGA
AGTAGCTCTATActtgcttcttttttttcacttaaacgGGAGGCCCTACA
TAGTCTAGTAAACTTATTATGTCACCCTTCACGCTGAAATGAACCTGGAA
AATACTTGACCAAAAAAATAAGCAGTCAGTCAGTCAAAAGtgacattctt
ttttttttcccatGTTAGATCTCTGATTGTCTACTTTAATTATTACGAAA
AAACACtacttttgaattttcagatttatGATCTATACCATTCAGCCGTT
GTTACACATCACGAAATCAATGAGGTTGCAAACCAAATCTTCCGTGGTTT
TTATTTACTCATGTTTGCAATTATCAATTTCGTTTTCATTGGTGTTATGA
CGGAGCAATTTGTGCGCACGTACAAGAAAGCACTTGCAAAAGTCCACCTC
GGAGTAGCAAATGCGTTGATCAATATTGAATTAAGAAGCAGTCATGATAA
AAGAAAAGGATACAGAAAATTTATCAGAGAGAAATGCAATCCTTACGTAA
GTTTTACCGACCGTAGTTCGATGGTAAAGCATATGGCTTCAGTGCGCACG
GTATGGGCAAAGGTGGTCTAAATAGATTACGACGCCCCTCAAAACAACAT
CACAAATGATGATGCTTCAGTGCGCACGGTATGGGTTAGATGATGCTTTC
GTCCgttagagggtcagtaaacgcTAATTATGCACAGAGTCAGGGCGTCA
GGGTGGTTTAcggggaaaaaagtggcggtaaaGTTTGGAACAACCCCGGa
aaacacctccgccactgcttactccaccccgGGCTAACCACCATTTTCAG
ATTTATCCcgtctcctaaactattccctttttcagtgatcttgtgtagac
gatagcatcgtctaggtaTGTGTTAAATCCCTacctgggtcataccaaag
ccGCAAAGGTACCGAAATAGTACTTGATGTCTCTGCTTAATGTTCATcaa
ttattaaaagaaaaagatcaaatgaGAGTGGAGTGACCCAGGGAGAAAAT
GTAGTGCCTTTCCACGCGTTTGGGTAGATAACTACTGAAAAAGGAGCCTC
CAGCTTCCattactctcaggtgcctatcAAACGTGGGGGTACAAATAAAC
GTGGGGGTTGgaattttttcagaattttaataaacgtgggggttggaaat
ttgatatGTTTTCGAAAATACCCCTAATTATTGGAAGCAAGAAGATGCAC
ATATTTTAAGTGTAACACAACAATAAGTCATATTTTGTCACACCTATAAG
TataattatatttgttaaaattgCTTAACTTGATAATTTGTCAACTGTCT
AGGTCAACGTCATTAAAAGCCTGCAGAAAATACTTACCTTATCAGCCAAA
ACTTAGTCAGCCCCTTcttgactaaattttggcttggtgactaaaatttg
ggccgactaaagatttagaaatggccaaaacttaattattagtcggccct
tagtgactaaattttgacgaggtgactaaaattagggccgactaataatt
aaggctgactaaaattaaggccgacttaGTTTTGGCCATTAAGGTAATCT
CCATTTCAAAGATAAGACGCGACTTTGAAATTAGGCGTCCAATGAAAAAT
ACTTGATaagaaatttctgaattttaataaacgtgggggtcctaataagg
tccgtgggggttggaaaattttcgaaaaattaataagcgtgggggcacgt
ttattaggcacctgagagtattATATCGTGACTTAGGAACCTTCTTACTC
TCAGTTGTCTAATGTGATGAATACCCAATATGCAACTCTGTTTATTAGTT
TGTCTATTTACTATGCAACCCCCAAATCTTCGACTAGTTGAATCCTACCA
TTGAATTTacatcattttttatctttccttAGCAGCCTACCAAAAGGTAG
AGAAGAGTGCCAATTCTGTCCTTGGATTTCTctgctttttctaaagattt
tttcttttccttgttgctgagcatcaagtagaGAAACATCAGAAGATTTT
TAGTATGACCCAACTGGGGTCGAATCCACAACATCGCACTATCTTAATGC
TATAGCCTTGTAGAAATACCTTTTAGAGCCTTTTCTCTCTTGTTTGGGTT
CTTGAAcagcaatagaccttatcggagtttctgattttcctaaaaaaagc
gatgcattgtgggattgtttcgagtgtgttacaatagaaatctcttagga
attcctcgagggaattctattgtaatacaatTGAaataatcccacaatgc
atcgcttttttagaaaaatcgaaaactccaataaggtctattctttttat
ttctattaGTTGGAAGAAGTATTTGGTAAAGAACGCCATTACAGAGAGGA
TCGAAATGACAAATACATCAATATCAGCGTTGGCAGTGTATCAGAACTGT
CGGAAAAACTCTCTGACTATCTCGGTAAGAGTTAGGCCGCCAGAATCCCC
CTAATTTGTTTTGTTCTAAGGAAAACGAATCAGACTCAGAAATCAAGACC
GCTTAGCAATTTTTTGGAACCGTTGTCGTTGAGTTTCAATGATCTTATGG
TACACAAGGTCTTAAATTTgcttttttctcgattttggtGACAAAAATTC
GCTTTTCAGAAGTGTTTTTTCAAGTCTGATTAGCATTCCTTACAGCACGT
CATTGGTAAGAATTAGACCATGTCTTGACCTACTGAATCAGTTTCTTTTT
GCGGCCAAATCAAATTCTCAACTTCTCTTCTCTGCTTCTCAAAATCTCAG
ACACTCTCCTTCGTAAATGCTTTGgcaatttttgattttgcacaattatc
ttcatttttagacattttcgGGCACGATTTTTCTTTCAATCATAGCcgtt
ttgatataattttgttagttttaagccCTATTAACATATCtctgagttta
aaatttgagctctGAGAAGGATATATCAATAAAGCTAAGGTAAGAAGCAG
AGATACAGATCTAAGATGCAGAGTTTCAAGTCTTTGAGGCAGTGAGATTC
ATATTTGAGAAGCAGAGTTTTAGATCTGGGAATGTGAGAAGCAAATCTCA
AAAGCTGAGATCATGAGAGGTATTTTTCGGCCAATCATCCATGGCAGTAC
CTTTACGGCCAATCACAATTTTAGCTTCTCAAATCTAAAATCAGCCTCTC
AGATCAAGGCTCAGATTTAGAATTCGGCTTCTCAGATTATAATTTCAACT
TCTCAGTTTTATGATATCTTTTTACTATtaaagtttttcttcttcaaaaa
ttataaattgattATTTTGCTTCTCAAATCATCTTTCCAGCTTCTCAGAT
CATCTTTTCAGCTCCTCAGATCATCTTTTCAGCTTCTCAGATTAACTTTA
TAACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATTGGGAA
TAAATATAAGCTGAACAGCTGATTTGAGAAGCTGAAAGGCTgagagtaaa
aatttgaaaagtagaaTCGATGATTGGCCGAAAAATACCTCTCATGGCAA
AGGTACACTGATCCCACTGTTCTAACATATTCTTAGTTGCTGGAACTCTC
TAATTATGATTTATTAATTTGGGCTTTCCCAGTAAAGATTCGCACCACCT
TGACAGAAAAAATGACCATTATTTAGAGGGGGTTGAATTGTTTCTGGAAA
AAGCTGAAAGGGTCAACTGTCTTGCAACTGCAGTTTTGGTGACTTCTGGT
AAACTTGTGCGAAATCCCAATTCTGCGATTGGGCTGGAATTACAAAaaat
tttggaggtgggtcggtcggtcggtcggaagaAATTATATTCTGACGATT
TATAAAATTTTCGTCAATGGTAGGGTTAACAGTTTTTGACGTATTCGATT
TTTTAAGAGTCAAACTTTTCCTTTGCCATTGCTTTAGCTCGTATAAAACA
TGGCTAAATGGAAAGAGCGCTAACAGGAAATTCaagattcttatgcttga
gtcagacaagatacgagttttgatttcattatttgaagttaaaaaaaaaa
atttttaaatagcaataactttttttgggtcggcaggtttcgaaATAGTG
TCAGGCGGGTGATGACAAaccatcattttttaaattccagCCTTAGTAAG
TATTTACGTAGTGCGATaaaatgaatgctaaaaatGCAGGTCTTTGACAA
TCAAACGACTACTTACTCAAAGGTAAGATTGAAGCTTGTCATGTGAATGA
TTTCTAGGAGCGTATTTCGGTAACCAGGTTATTATCTCCATCTATAAAAC
CGACTTtgccagctggtacacaacgttgtttcaacgttcatctaacgttg
tatggacattttgaacgttagataaacgttgaaacaacgttgtctgGAAG
CAGGgttcgtttttttcttttggaaatattcctttctcttcttttttaga
TGATGCCGACTTTCTAAATCAACCACAAAGGTCTTGTGATATTGATTGTT
TGCAGAGTCTTCAGGTAGAGTTGGAACGCCTCTCGGCAGACATGAATTAT
GGCAAAGCAGGGTTACAGTTGAAATCGAAAGAAGTATTGGCGAAAGCCAA
TAAATCGGCTGAAATTATTAAAGCAGGTAAAAAATTACATATTGTATATT
TACCTATATATGATTTAAAAGATAGAgacttaaggcttggggacgaTATA
TGTTTTTGCAAAATTGATTCTAATCAATTTTGCTTTATTGTCCCAgagac
aaaatcagcgtgtcttttgggtatgtCCTTCCccttttgtcccatgaaac
aaaaaaagaaaccatgggacatgcacttttttcttgtgttggtaggatgg
agcatgttgcattgcaccaacgcgaaaaaacttttttttagttATTTTCC
CTGATAAAGCTATATGGTAAAAATCAATCATTTTCACGAAATTCAGGTTG
TGATCCACGGCATCTAGCAAAAGGAAAACATCTATCCAAACCAAAACAAT
GAAGATAATCTGGAATCTTCTGAAAAGGTTCCGTTCCATCAGATACGAAG
GGTCAAATAGGAATGATCCAGCTCCATTCAAAGTTAATGCCTTGCTGCCA
TTTTAATGGTTAAAACGTAGTTCATAGATGTTGAAATCTTCACAACTAAC
TCACTTACTAAAGAGACTTCAAAGCGAAAACGACAATAACAGAACATCAA
AAGATAACTTTATTTTAAACTTTCTCCGATAAATTTTGTCTTGACTATCA
GACAATCTTATTTTACGAAAAAGGGTCTAAGCCTATCTTTGGCTTTTGGT
TGCTCTGGACTCGATCTAGACTCATAAGAATAAATCCATTCTACCTCCCC
CACCCTCTGCCGTTAAGAAATACGGGGAATGTGATAATCGAACAAGTTTA
TTCAGTccaaaccattgagtttaaagcgcgaagggctagagtagaatctc
taacatTTATAAGGCAAGATAAAGTGAAGCCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000719XLOC_000719Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001332-exon-sc0000010-1491911889:155949..156391TCONS_00001332-exon-sc0000010-1491911889:155949..156391Clytia hemisphaericaexon
TCONS_00001332-exon-sc0000010-1510915933:155949..156391TCONS_00001332-exon-sc0000010-1510915933:155949..156391Clytia hemisphaericaexon
TCONS_00001332-exon-sc0000010-1575043694:155949..156391TCONS_00001332-exon-sc0000010-1575043694:155949..156391Clytia hemisphaericaexon
TCONS_00001332-exon-sc0000010-1491911889:156448..156671TCONS_00001332-exon-sc0000010-1491911889:156448..156671Clytia hemisphaericaexon
TCONS_00001332-exon-sc0000010-1510915933:156448..156671TCONS_00001332-exon-sc0000010-1510915933:156448..156671Clytia hemisphaericaexon
TCONS_00001332-exon-sc0000010-1575043694:156448..156671TCONS_00001332-exon-sc0000010-1575043694:156448..156671Clytia hemisphaericaexon
TCONS_00001332-exon-sc0000010-1491911889:157264..157532TCONS_00001332-exon-sc0000010-1491911889:157264..157532Clytia hemisphaericaexon
TCONS_00001332-exon-sc0000010-1510915933:157264..157532TCONS_00001332-exon-sc0000010-1510915933:157264..157532Clytia hemisphaericaexon
TCONS_00001332-exon-sc0000010-1575043694:157264..157532TCONS_00001332-exon-sc0000010-1575043694:157264..157532Clytia hemisphaericaexon
TCONS_00001332-exon-sc0000010-1491911889:158586..158744TCONS_00001332-exon-sc0000010-1491911889:158586..158744Clytia hemisphaericaexon
TCONS_00001332-exon-sc0000010-1510915933:158586..158744TCONS_00001332-exon-sc0000010-1510915933:158586..158744Clytia hemisphaericaexon
TCONS_00001332-exon-sc0000010-1575043694:158586..158744TCONS_00001332-exon-sc0000010-1575043694:158586..158744Clytia hemisphaericaexon
TCONS_00001332-exon-sc0000010-1491911889:159527..159756TCONS_00001332-exon-sc0000010-1491911889:159527..159756Clytia hemisphaericaexon
TCONS_00001332-exon-sc0000010-1510915933:159527..159756TCONS_00001332-exon-sc0000010-1510915933:159527..159756Clytia hemisphaericaexon
TCONS_00001332-exon-sc0000010-1575043694:159527..159756TCONS_00001332-exon-sc0000010-1575043694:159527..159756Clytia hemisphaericaexon
TCONS_00001332-exon-sc0000010-1491911889:161112..161375TCONS_00001332-exon-sc0000010-1491911889:161112..161375Clytia hemisphaericaexon
TCONS_00001332-exon-sc0000010-1510915933:161112..161375TCONS_00001332-exon-sc0000010-1510915933:161112..161375Clytia hemisphaericaexon
TCONS_00001332-exon-sc0000010-1575043694:161112..161375TCONS_00001332-exon-sc0000010-1575043694:161112..161375Clytia hemisphaericaexon
TCONS_00001332-exon-sc0000010-1491911889:162386..162598TCONS_00001332-exon-sc0000010-1491911889:162386..162598Clytia hemisphaericaexon
TCONS_00001332-exon-sc0000010-1510915933:162386..162598TCONS_00001332-exon-sc0000010-1510915933:162386..162598Clytia hemisphaericaexon
TCONS_00001332-exon-sc0000010-1575043694:162386..162598TCONS_00001332-exon-sc0000010-1575043694:162386..162598Clytia hemisphaericaexon
TCONS_00001332-exon-sc0000010-1491911889:163668..163830TCONS_00001332-exon-sc0000010-1491911889:163668..163830Clytia hemisphaericaexon
TCONS_00001332-exon-sc0000010-1510915933:163668..163830TCONS_00001332-exon-sc0000010-1510915933:163668..163830Clytia hemisphaericaexon
TCONS_00001332-exon-sc0000010-1575043694:163668..163830TCONS_00001332-exon-sc0000010-1575043694:163668..163830Clytia hemisphaericaexon
TCONS_00001332-exon-sc0000010-1491911889:164467..164618TCONS_00001332-exon-sc0000010-1491911889:164467..164618Clytia hemisphaericaexon
TCONS_00001332-exon-sc0000010-1510915933:164467..164618TCONS_00001332-exon-sc0000010-1510915933:164467..164618Clytia hemisphaericaexon
TCONS_00001332-exon-sc0000010-1575043694:164467..164618TCONS_00001332-exon-sc0000010-1575043694:164467..164618Clytia hemisphaericaexon
TCONS_00001332-exon-sc0000010-1491911889:164922..165194TCONS_00001332-exon-sc0000010-1491911889:164922..165194Clytia hemisphaericaexon
TCONS_00001332-exon-sc0000010-1510915933:164922..165194TCONS_00001332-exon-sc0000010-1510915933:164922..165194Clytia hemisphaericaexon
TCONS_00001332-exon-sc0000010-1575043694:164922..165194TCONS_00001332-exon-sc0000010-1575043694:164922..165194Clytia hemisphaericaexon
TCONS_00001332-exon-sc0000010-1491911889:167008..167122TCONS_00001332-exon-sc0000010-1491911889:167008..167122Clytia hemisphaericaexon
TCONS_00001332-exon-sc0000010-1510915933:167008..167122TCONS_00001332-exon-sc0000010-1510915933:167008..167122Clytia hemisphaericaexon
TCONS_00001332-exon-sc0000010-1575043694:167008..167122TCONS_00001332-exon-sc0000010-1575043694:167008..167122Clytia hemisphaericaexon
TCONS_00001332-exon-sc0000010-1491911889:169248..169424TCONS_00001332-exon-sc0000010-1491911889:169248..169424Clytia hemisphaericaexon
TCONS_00001332-exon-sc0000010-1510915933:169248..169424TCONS_00001332-exon-sc0000010-1510915933:169248..169424Clytia hemisphaericaexon
TCONS_00001332-exon-sc0000010-1575043694:169248..169424TCONS_00001332-exon-sc0000010-1575043694:169248..169424Clytia hemisphaericaexon
TCONS_00001332-exon-sc0000010-1491911889:169745..170280TCONS_00001332-exon-sc0000010-1491911889:169745..170280Clytia hemisphaericaexon
TCONS_00001332-exon-sc0000010-1510915933:169745..170280TCONS_00001332-exon-sc0000010-1510915933:169745..170280Clytia hemisphaericaexon
TCONS_00001332-exon-sc0000010-1575043694:169745..170280TCONS_00001332-exon-sc0000010-1575043694:169745..170280Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000010supercontigsc0000010:155949..170280 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0353716	0.0402417	0.0333746	0.0195911	0.079501	0.0816696	0.075793	0.0638609	0.00496783	0	0.0179181	0.0157049	0.384234	0	0.0267802	0.0359241	0	0	0.244405	0	0	0	0	3.12238e-05	4.98569	4.71473	0	0	0.0130866	0.0199997
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00001332 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top