TCONS_00001327 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001327
Unique NameTCONS_00001327
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2894

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001327 ID=TCONS_00001327|Name=TCONS_00001327|organism=Clytia hemisphaerica|type=transcript|length=2894bp
TGACGACGAAGATTACGAAAATGCTGATGCAGGATTTTGTGAAGGCTCGC
CACCTCTTCAGCCACCGCTTCAGCCACCACCAAGAACATACAGTCAAAAT
GTGAACACTTTCAACAATAGTAATGATAGCATAGATGAATCCAAATCATA
CAACTATCTGtcgCAAGACGATCAAGATGATATATATGATACACCAGAAA
CTGAAGAAATAGCTCGCCCACCACCTCTGCAACAGAAACCACAACGTCCA
GGAGGGTACGCACGACAACCACAACACCAAACTCCAATACCACAACACCA
ATCTCCAATACCACAACACCAATCTCCAATACCACAACACCAATCTCCAG
CAGCACACCAAGATAACTTCAATATGAGCAATAAACGCACACAAAACATT
GATAAGCATCGTCAACAATCGTTCGCTAATAGTCGAGCAATGTTCGAACA
GAGATCAACTTCACCTCCACAACCAGCTATCAATCGATCAGCTAAACCAC
CTGTACAACAACGTCGAAGTGATTCTAACAATAACCCGCCCTTCGCTCCC
AAACCCAATATTTCTAAGCGCCCAACGATTCCAACGCCAGCAGCGCAACA
AAGGGTGGTACCGCCCCAACCGATCCAACTTCAAGAACCTCAACATTATG
AAATGGATAACCAAAGCGAAGACTCGGGCTGCCATGAGGACTTTTACATT
GAGCCGCATCAAGCCAAAAATGCCGTCATACCCCACGAAGAAGAAACGTA
TGAGGTCACAGACGGGCCAACCTCCCCGGTCGAAATCATATCCTCAAAAC
CTAAAGGCATGCCTGGTCAGCAATTCATTACACAACTAAATCGAATGACC
TTAGAAAGATCTGCTCCCTCACTTCCCGCCTCACAGAGCAAACCAATGGC
TGGAAGACCTCTCGTACCGACCCCAGATCAAGAAGAAACTTATGAAATCG
CACCTGAGAACCCTCGTTCACCACCATTACCCGGTAACCACCCTTCAGCC
GCAAAAAGCCCCGGCATCCCATCTCGACCTTTCGTTCAGAGCCGGCCACC
AATGCCAGTACCATCACCACCACCACAGGAAGAAGAAACCTATGAAGTGA
CGCCCGATCAAGCGCCCGCTTTACCACCCTCACATCCTTCCTCGAGAAAA
TCTTCAAGTACTTCGTCTATAGGGGAATCACCGAGAACGTCCATTAAAGA
CAGATTACCAAATCCTCGAGATAACATACAAGAAGATTATGAGATGATAA
CTCATAGCCAAAGACCGCCTCCTCAACTTCCTATCTCTTCACGTCCATCT
CCACCCCAACAAAGGCGCCCACCACCCTCGTTAGAACCAAAAGGTCAAGA
ACCTGTATTACCTCcgCGCAACGAGAAACCGCAACGCCTTTTACCCTCGC
CTTCGCAAGAAATCAACATTCCACCCAGAACGCCAAAAATGTCACAACCA
CAAAACTCGATGCCTCCAAAGCTTATGGGAAGTCTACCTACATTCAGTCT
AAGCAACAGCTGGCTCGAAGATGTCAAGTGCGGACAAAGGAAAACCAGCC
TCGATATGGGTGCCATAAGTCCGAAATTATTTCGTCGTATAAATGACCGT
CGTTCAAGCTTATCTGCCGATGAAATTCAAGTCAATCACTCAACTGCATG
TGTCTTAGGGCCAAGCCACCCAGCTTTCCAACAAGCAACGATGAGTTTAG
ATCGAAGCAAGGATACTTGTCCTCAACCTACCATAGAACGTATACCATCG
TACAAAAAGCAAACACAATCTGCAAATGCACCAACGCCTATCAATAGACA
AACGCCTGCTCCCGCCCATCCGTTATCTGGTTTCACCTGGTTCCAACCGG
AGCTTGATCGTAGAGCGTGCgaaattaaattgaaccaaaacagaAGGgAT
GGTGACTTTGTGATACGAAACTCATCCAAAGCCGGTGTCCCATTTTCTAT
ATCAATCTTTCACGATAATGTTGTCCGCAATTTACAGCTGCTTCAAAAAG
ACGGTAAAATGTACTTGGGAAGTTCTACTGAGGGGTTTGAAGGAGTACCT
GAATTGGTATCGTATCATCAGAATAACGAAATCATACTCAACACTGGTGG
TAAAGTGAAACTACTCAGGATTTGATGGCAATAGAAAATTTAGTACGCAT
TTATAAGgaagaaaaacgaaaatatttttgggtaaTGTCAGAATGGGTGA
ATCCAACCAAAGCTTTGTTGGAGCTTTTAAATTCAAGAATTCGGAAGAGA
ATTCGCCTTGTGGACTTTAAAGAGCTATTTATAAGTTCATTCAATTGCAA
CCGAAAATATGGGATCAACATTGATCACCATCATTGTTTTGGATCATTGC
TTTTTTATTAACGGAGCTTCAAGATTAATCTCCCGCCGCCTTACTAATAG
ATCTTATTGGAGTTCGGGGGTattaaaatagaaatctcttaggaattcct
cgggggaattctattgtaatactcccgaaacaattccacaatgcatcgct
tttttagaaaaatcaaaaacttcgaTAAGATCTATTTACATGGTCTCCGA
AAAAGTCAGAACACTTACAGATatagaagaaaaaaagtattttttatgGG
ATATCTATGAAAGACACTTCGGAAAGGCCGATTTAAACAATCACAAAGAC
AAACTTGGTGATAGAAAATGTTTCATATTGAACCAGAGTTGTTTTTGGTG
ATACTTAGTTAATTTCTTGTTGCTTTTTagtttagatttttttgttatgt
aaatacgaatttgattatttttctaaataattaTTGATAGATGAATAGGT
TTTCTAATGGCggataattctttttttaaatatttgtaATTATTGGTAAc
ttaaatttacagaaaaatatttttttcaaatgtttataTTAAAA
Run BLAST on NCBI

transcript from alignment at sc0000010:140211..155140+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001327 ID=TCONS_00001327|Name=TCONS_00001327|organism=Clytia hemisphaerica|type=transcript|length=14930bp|location=Sequence derived from alignment at sc0000010:140211..155140+ (Clytia hemisphaerica)
TGACGACGAAGATTACGAAAATGCTGATGCAGGATTTTGTGAAGGTAGTA
ACAATCGAGTATTATATATGTCAAAGTATCGTACTCTAGAGATTCACTAT
TTCACGGCTCGACTATTTATTCCTTAAAGATTAGAATGAATTGTACGGAA
CATTAGAAGGAGCGGGGATCCGAATCGCGAATCCCTGGTTcgagacgctg
acgcctttgaccacttagCCATCACTCCATAATTGCTCTATTTTGACTGA
CCATTTGATACAATGGTTTTTCGAAATGAACTTTCAATTGTAGTAACTGT
ATTTCTCTCAGCTTCTTGTAAATGTTTACGAATTTTTAGAAAGAAGAGAG
GAACGATAAATATGATAGCAATTAGAAACTTTGGTAATCATATTTATGGG
ACTGTTGCTGTAAGGTTAATCTTTTTTGTCAAGTTGTGTACAGAAGATAA
CCTGTGTTAAATTTACTGTGTTAATTTTGTTGCGCaatctaaaatttttc
tctTGATTAATTTTTAGGCTCGCCACCTCTTCAGCCACCGCTTCAGCCAC
CACCAAGAACATACAGTCAAAATGTGAACACTTTCAACAATAGTAATGAT
AGCATAGATGAATCCAAATCATACAACTATCTGGTAGGTTATTTTGTCAA
CAGTTTTTGTACGACTTTTTACACGTGAACTTATATTTTGTATGCCCGAA
CATAATTTTGTTCGCTTACTATTTCTTTGGTGATAATTGCATTTAGGTAT
TGGGTAACCCTTAAAACCCTTCCTCTGCTTATACTAAAAAGTCCTgttca
atgtgaaaaagatgTTGGACTTTGACTTGGTTTTCTTGAGTGTCTACATT
GATCGAGCCTAGTGTATAACTTCatagagcccccccccccagcggttttc
atgatggcgtgattggtGTGTGATCAGAGGAACCAACGTGATCATTatag
aaaggaaatttaactTGTGATTGTgtgatttgaaaggtgactgggGGCCT
CTTCATACAGTTCAACTCCTGATTCAGACAAACATAGATTTTATATCATG
ATATTGCAATGCTCCTAAGTAATTTAAAATggttttaaaagtgttttttg
tTCACACGGTATCGGTTTGCAGCACCTCATTTTACGAAGTTCtgatattt
gttttttataagtaaTCAAATGTAACTTATCATTCAGGACTAGGATTACC
CCCAGTACCAAACAAGATAGGATCGGCTTACATAGTTTTAACACGGGGAA
TTTCGGCTGTGTGAAGCCATCAAAGTTCCATTTATAAAGTGCGAGATCCA
GTTGAGAAAATctacatattggaaaaggtcttTTCGGGGAAAATGTTTTG
AAGTTTTGGGGGTTTCTTTTCCTTGTAAGACTGATATGATAGTGACTAAA
ATTCAACGAATTTAACCCATGGGAAAATGAAAGTAACAAACATTTTTGGA
GAACTCAAAGTCTGTTAAAAAATTAGTATGCTCCAatatgatattttgaa
ttttttcggTCAAGTAAAAAAGGTCAGGGGGATTATTTTGGGGAATTACT
TAAAAAATGCCATGCAGTATTTGAAAGAGAAATTGCTTTATATGATATAC
TTTCTTAAACAAATACCTTTGCATCAATTATCGTGTTTAGATTAAAAAAT
TTGTGTGTACAGTACGTCaacattttgagaaattcaaaGTACACGATTta
ttagtctacacaatagacagatacaggcttttaggccttactcttgttCT
ATAGGCACTgatataggcggccactagtgaaccccaccgggaattgctta
ttaataggtttaaacataatagacaacattcacaaaagatgtttatcaat
agagattttaaataaaagaatgtttaaaacacagNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNCACGATTTATTAACAGGACTAAACACGTCtct
ttgtttttaatgtttatcTTGTTGTCGAAATCGGtgaatcatttttcttt
ttgtatacACAGGGCATCCCCTCTCATTAATTTTCTCGTCTTTTTTGATC
GAACTTGTATCATATAAGTGTTTATACGCTTGATGATTGAAATctatgtt
taaagattttttactgctgaaagtttaaaaaggaagtTTTTTAGGGAAGG
ctgtttaaggctttttgaggattttttaaaaaggtttttggGGATTTTGG
AAACAAGCCTTAGAATTATTCAAAAATGTATGAAGCCTTCCCTATGGTAA
GTGATATTTTGCTTTGAATTCTTGAAATTATAATCTTAAATCTCTTTTTA
GCAGGGGGGGTGTCGGTACTAAAACccaagacatatatgagtactacaag
gttttttgacgatttttgacataccctcacctaatttttgaaaaaggaat
tttagtacacatgtactgaaatttatttttacattttagcaTAGTGACCA
CCTAAATAAGGCTTATTTTGGAATTCGGTTCGAAGAATGTGGGTCTttgg
actttcaacaaaatgccAACTCTGGTTATTTAAGCTGTCAATGAACCTGA
TATATCTCTATCTATTCTAGATAAAGACTCAGAAACAGTCAAGACACTTT
TGCCCTGCTCTACTTTAGTTATTGCAAAGATTGATGGGTTATTTTTCACC
TCTAATTTACAGAggaacctttttcctcagttgagataaaaatttcctat
tgaaatattaatggggatacaaattctattgttccaaggttaaaaaccca
gtggggatatgattttggagtgcaatttttacacatggaattttgagtgg
ggatgaaatcaaagtcaatttcccagtagggctgaaattcaagggtattc
taccaccggggacaaaatttttgcttaatttgtgacacagggacgtattt
aaatcttatatagagagtttttattttttcattttgcctaaaatgctcAG
TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtag
ttaaatttcctaaaatttggtgatttttagtactcatgtattaaaatttt
tcttaaatttcttgaagacccccacctaatttgggattttagtacacatg
gtactaaaatgcttttaggctttttttgtaataccaccacgtcactaaaa
gtcatgatgtctgaaattttagtaccgacccccccccctctttttaGCTA
AATTTATAGTTTTTCACACAAAGACtataagctctagtttagacggccga
ctttctgccctgtctattctaattgttagagtaggcagaagtTGGGCAAA
AAGTTGGCAGctaaagacattgcattgacgtcaaaagagggcgatgcatt
gactttagacggcccactttatgcccactttgattcacaattagaataga
cagggcaaaaagtgggctgtctaaactagagctaagctCGTCTGAAAGGG
TAAAAGAAAATTGTCAATACTTTGTATGTATTGTCAGTACCTGGTAACTT
TCAGTTTCGGAAATTTTCAATGTCATTATTAAGTATTCTACTCATTTTAT
CTTGAATTTGGTCACAACTTTCATTTAGTATTGGCGTCATAAATGAGGTA
TTATTTCCTTGAAAGTTTGTGAGAGATCTATGGGCCTGTGTCAAAAAATG
TTGCCTTTGAAGTAGGTTTAAAGCATTTTGTACATTTACGACGAATCTTT
GTTAAAAAACAATAGGccgcaaaattaaacaccttttttgacaacaaata
atatgcccataacttttgatctagagaagttgggattTTGAtgcaataca
cttttttgctcagtttgaagagttCTTACGTAGTATAGGTcttctttgat
tttgaagacccccaaaaatcatgaattttctgacctttcaattttgtttg
gaaacgcaaaaaatcgaaaattatgcAAAAACTGCAGTTTTTCAAggttg
gtaacattcaaattccgaatcagcaccctcaaattgaccaaaatcaatCA
TGAaaggacattttgaaaaaaagtgaaacgttttggtGGCACTGCACTGG
CCTACAAGTTTCCATTTCAATAGAGGGAAAGGTAATGATGTTTATCTCTA
AGCAATTATAAATGAACGATCTTAAAGCAGTAAATTGCTTTTATAAATGG
TTTTGAAATTAGCTAACCGCGTCTTCTGAAATGATTTCTATTAACTTAAA
TTAAGTTTTGGCTCCTATGTCATATGATACGTTTCGTTTAAAAGAACATA
GGCGGACAGTTTTATCATGAAATTTAAATTGATAGAGATATTGTTAAGTA
ATCTGGTCTATTGAAAACAACTTTTTAGCGTTCATTATCTGTAGAAAATA
GATTGTAATCAAAGTCACAGCTTaggttgtctgtacacagacccgatatc
tacggctaatttcaaaaattcatttccgtagacaaacgtgagatacactc
tggtacagagtacagCTTAGGGATCTGGATATTACTTTTGCTTTTTGCGT
TTTGTTCCTATTTCGAATTTAATCAGGTATAGATATTCTGTGATTGAAAT
ATCTCAATTCTGCCCAATTTAGTAACTATTACTGCTACTTTAATCATATA
GCTTTCGTGcttaatatttttggaaaatagtttTGGAAGCCCTAGCGAAT
TTATTGTATTGTGTTAGCATCTTGAAGACATGGTTTTATGGGATTTGATT
GTCTCAATTCTGCTATAATTTAGTAAAAAATTTACTTCAATATACTTCAC
TCGTATAGCTTTTGTGCTCAATGTTTTATGtaggaatacacgttttttta
taagaacaaactatataagaacataaggcttcactggccaaaatgttaag
agcaagttaagaacattttaaggctttgtggactcaaaaccacccaattt
cttaggaaaatagtcaaaattattcacaaaatggtcaaaataagaacatg
ttcagaacaattttaggcttaaaactcaaaaagttcagaacattcaaggc
ttcaaaaaatttggatgtttttataaaaaaaacgcgtAGTCCTGGTAACC
CTAGCAAATTTACTTGTATTTTCTCAATATCTTTACTttccttttcttta
tttttcatttatcacatttttttttcagtcgCAAGACGATCAAGATGATA
TATATGATACACCAGAAACTGAAGAAATAGGTTGGTGTATTTGTATTTAA
AGTTCTTGACTAGCATAATTGAATGTCCAAGTTATTTTGTGACCAGCCAA
AAGTATAGTTTTttattctgtttgttttttttatacaaGTTCGTCAAAAT
TAGACGATATGTGGCGACTAGGACAGAAATAATTTGATATTGAACGAAAA
CAACTATGATGATCAGTTAATcatggaaaaattttaaaccccaGATCAAA
ATATTATTCAGGAATATTATTACAGTCTTGGTCAACTTAATGTATACACC
GAATGTCAAAGTTTGAAACAGTCCATTTTTCATACTTTCGATTCAACTTT
TACAGCTCGCCCACCACCTCTGCAACAGAAACCACAACGTCCAGGAGGGT
ACGCACGACAACCACAACACCAAACTCCAATACCACAACACCAATCTCCA
ATACCACAACACCAATCTCCAATACCACAACACCAATCTCCAGCAGCACA
CCAAGATAACTTCAATATGAGCAATAAACGCACACAAAACATTGATAAGC
ATCGTCAACAATCGTTCGCTAATAGTCGAGCAATGTTCGAACAGAGATCA
ACTTCACCTCCACAACCAGCTATCAATCGATCAGCTAAACCACCTGTACA
ACAACGTCGAAGTGATTCTAACAATAACCCGCCCTTCGCTCCCAAACCCA
ATATTTCTAAGCGCCCAACGATTCCAACGCCAGCAGCGCAACAAAGGGTG
GTACCGCCCCAACCGATCCAACTTCAAGAACCTCAACATTATGAAATGGA
TAACCAAAGCGAAGACTCGGGCTGCCATGAGGACTTTTACATTGAGCCGC
ATCAAGCCAAAAATGCCGTCATACCCCACGAAGAAGAAACGTATGAGGTC
ACAGACGGGCCAACCTCCCCGGTCGAAATCATATCCTCAAAACCTAAAGG
CATGCCTGGTCAGCAATTCATTACACAACTAAATCGAATGACCTTAGAAA
GATCTGCTCCCTCACTTCCCGCCTCACAGAGCAAACCAATGGCTGGAAGA
CCTCTCGTACCGACCCCAGATCAAGAAGAAACTTATGAAATCGCACCTGA
GAACCCTCGTTCACCACCATTACCCGGTAACCACCCTTCAGCCGCAAAAA
GCCCCGGCATCCCATCTCGACCTTTCGTTCAGAGCCGGCCACCAATGCCA
GTACCATCACCACCACCACAGGAAGAAGAAACCTATGAAGTGACGCCCGA
TCAAGCGCCCGCTTTACCACCCTCACATCCTTCCTCGAGAAAATCTTCAA
GTACTTCGTCTATAGGTaagtaaaagagaaaaaaatttgccaGCCTGGTG
ATCTTTCTGGTTACTGTGAACATCACAGTTTGGTTTTTTCTGAAATTNAA
TTTGCCAACCTGGTGATCTTTCTGGTTACTGTGAACATCACAGTTtggtt
ttttctgaaatttaacCTTGTGAGGACGGACAATTTTATCGCGTATGTCT
CATCACATTTCTGATCATATAATGGAGAGCACGTATCCTCGTGTTATGTT
CTAGCAGGTTACATCTTTATATATGTGAAAAAGTAAGAATTTCTCTCcga
ctatattcactcaggagatttgggtggcagagcagcatatgcatttcgtc
cttattgaGACTCATCCATCAGATATATATCTATCAGTGAATTGAGTTTC
CTTCAAAAGAACTCCTATCTTGTGATTTGATTGATTAAGCCTTCATCAAA
AATATCCTGGATAATAATTGTGGCGTGCAACTTAGTGTCCGGTATCACAG
CCTGCAGTTTCATTTCTCGTCTAATTTGGaactagcctagttaactaagc
ctgtattcacaaggctaggataCACCGCTAATGGCAATATAGcattttcg
gcgctttaaagattttttatatttacggattttatgtttgccttggaata
ctggtAATTCAGTTACAagttaccatcagatttatcctagtgactgaatc
aaaccaGTTTAGATTTCTAGGCTTATTTGGAGCTAGGTGGTAATAATATC
TAAGCAGGTCATAAACTATTCGATTCATTCTACCATCATCTATCTTCTAA
TACCTACAGGGGAATCACCGAGAACGTCCATTAAAGACAGATTACCAAAT
CCTCGAGATAACATACAAGAAGATTATGAGATGATAACTCATAGCCAAAG
ACCGCCTCCTCAACTTCCTATCTCTTCACGTCCATCTCCACCCCAACAAA
GGCGCCCACCACCCTCGTTAGAACCAAAAGGTAATGATCATTCTTCTCgt
tgaatttctttttgtacTTGCAGGTGTGTAGCAACTTATTCACATTCTTT
ACCAAGTAGGATGTTTAGGACATTCATTATATTCCAGATTTTTCCacgaa
aaagttgattttgtattggaaatccaggagttacaaaaaacattttacct
TAGAAATCCGCtatcgtccaccccctgtatgctGTTTCTCAACAGCATTT
CttcaactcaaaatttcagaaaaaaaacttttatccaCTGACATTggaat
tatttttctaaaatttaaagtGAATTTTCGTGAGGGGTATTGAAACTCTA
GAAACTATGATCATTAATATTTTGGGGAATGAAAAATAGGATTCTGTTGA
TATGTTGATTCTTTGTATACAAAGAGAAAACACAAGTTGACATGCATGAT
AtcgttaatatttttttgttgctttttaagGTCAAGAACCTGTATTACCT
CGTAAgcataaatatttatatttcattattttgtaaGCTAAGTCGAGTCT
TCATGGTCCCTTACttataaagattttgttttaaaaaaaaactacgaACG
AGGGGGGGggatttaaaactttctgatagTTGGTCTTTTATTTTAGCTAG
AAAACTTGAGCTTTTGGAAGCCGAAGATAGTGATCTGATGACCCCTGATG
CTGTATTGTGCTCCAAAGAACTTAATATTTCCTTTTCAGCCaaacatatt
ttcaatatatccttcaaaatatttttcatttcagcgCGCAACGAGAAACC
GCAACGCCTTTTACCCTCGCCTTCGCAAGAAATCAACATTCCACCCAGAA
CGCCAAAAAGTAAGTCAACTCGTTATATGCACCATAGCAATGTCTTTCAC
GGACCCaacatctgattggttgaaattgacgtattgactgaatttaccaa
tcagctattggttccgtgatgtaatatcagaagacattgcaatggtgcat
gtAATGAATAGGGTGTGTTTATAATTGATTGGTATTTTAAAGACAGGGAT
ATCAATACGCTAACGAAGTTTTTTCTCTGTTGCCATCTTCTGCTCGAGAG
AAAGATTCAAAGAAATTGTGTTTTATCTTTGAGACTTTCTGATCTGAAGG
TACCAAACTTCACACTACTGATTGTATTATATGCTGCAATTAAAACCATT
GTATAACAAAAACCCTCGACACAAGATTACCTACGAACCAGATTTTGCCA
ATTCTTTGGGGCGCACATGGTttatacccagctggcacacaacgttgttt
caacgttcatctaacgttatatggacgctgtgaacgttagataaacgtcg
aaaaaacgttatgtgccagctggatAGTAAATACTCTTGAATGATAAGTG
AGGGTAATAAATTGTTGGCAATAGATAAATTGGAACATCATGTCTTGTTT
CTTTTTCCATACAGTGTCACAACCACAAAACTCGATGCCTCCAAAGCTTA
TGGGAAGGTAAGCAAAATACTGGGTTTTTGAAACTTTGCGTTTGTTCATG
GTTCCTTTAGGTACGACATTTACATAGTTCAGGTGGAAAGCTTTCACGTA
ACTTTTCGCGAGGttgaaaattcgcgaaaattattAAATAAGTTTTCGTA
AAATAAAAGGAGTATGGAAGTCTCTAAGCCATAACGACGTATAATTTGCT
GAGATCACCatgtttgaatgaaaaagactttgtagtattattttttgaaa
aatacggAGTTAAAAGACAGACCATGtcgtgattttctaaaaaagataat
TTGTATGTCTTAAACGTAAAACTTTTGAGATAGATGATGAGTGGCCTAAA
TAATTATTGTCACGAAGTAGAGCCTTTGCTGAGTACTTTTTCTGTCTCGT
TTTTGATGCTCTAAGGATGGTTACTTCCTCGACTTAATGACTATTACTGG
GACTTAAACGTCCTTAGAGATTTTGGAAATTTGGTCTATCAGAATGTTCC
TCGTTCTTTTTTACCCTAATTGAGTCCGGCTGTCCGGTGCGTTTTCTTTT
TAATCGTTTTctttcactgacctttatatatccctggaccaagttactca
agcaaaatattatgatcggagtttttttgaaattggtacccgtgGAGAGG
GCGCTAGATCTAGTTTTGCTTGTACATTAATGATGTATCATCGTTTGTCG
TAAGGCAAAGTctcaaacactacaatggcttctttgagggtaccaacttt
caaaaacttcgatcaaaggtGGCGGATATTGCTTGGttcagggatatata
aaggtcagtgttttCTATACAAAAAAATGTAAGGTATCATTTTTATGCAA
TGAGATCTGCAATATCCATCTGTGTCTCTTACCCCCGTGACTTACTACCA
TTGCAGTCTACCTACATTCAGTCTAAGCAACAGCTGGCTCGAAGATGTCA
AGTGCGGACAAAGGAAAACCAGCCTCGATATGGGTGCCATAAGTCCGAAA
TTATTTCGTCGTATAAATGACCGTCGTTCAAGCTTATCTGCCGATGAAAT
TCAAGTCAATCACTCAACTGCATGTGTCTTAGGGTAGGATGATATGATAA
ATCAACATtgactaaaaaagaaaacatgacaCACAAAGAGACATGGCGTG
ACAGTTGAGTTCCGGACAAATATAATAGGCTTACTGTAATCCGTTTCCAG
TACAGTGTGTCCCGAATAAAGTTATCAAGAAAATCTTGGCAAAATCAATC
AACTCGTTGGCATATTACCGGGTGTGTCAGAAATAAGTTACcctttttga
tttgatattgtaggcTTTTCGCCTTTTCTgacaatttttaaaattgacat
tttaggtttttaaacataacttttgaacccatgaagtaaaattaaaaagt
aatacaccaaattttaagttaggctttcctctgtATGATtcagaaacttt
tgaaaaacctCTCAACTACTGACaacaatattaaattaaaaaaggATAAC
TAATTTCTGGAACACCCGGTAGTTTAAAAAGATATTTCGATTCATTCCTA
GAACAAACAACTAAATACAAGCCAGTTGTAAATCGTTAACCCTCATACTG
TGATGGAGGATTTTTCATATACTAAAAACTGACCTCTTGATTCGGGACAT
GCTGTAAATTGCATGTTAACATGGAAATAACTGAACAATCAATGTTCATC
AAGGATGTGAGACTTTCAATAATGTTGAAACTGGTGACGGactaaaattc
tgaaaataaaatgcaaaaaaaaaaaatacattagTTTACNAGACTAaaat
tctgaagaaaaaaaatgcaaaaaaaaaaatacattagTTTACTTTCGACG
AGTAGATTTGCTTCTTTACTTGTTCGTGAAaataaatttcgcgaaattga
atgaaatggaaatttttaaagttttgttttcGACGTTTTGTAACTCCGAA
CGTTTTAGTTTTGGCGAAAGCTTGACAtcttttggaccattttcagttga
tttaaGGCCTTCTAGGAAAATACATCAACGCGAAACGTTTCAAAATATTG
ACTTAATAATGGAAATAAATCGAGAAATTTGTCTCGCAGAATTGAACCTt
gtgaaaattaatccaattaaagcaCACTGACAAAGAACAGTTTAAACAAT
GAAATATTGATGATTTTGACGAACATTACCTTAACATAACCAATGACATA
CGAAATATCGActttacaaaatagaaatactTAACCACTCATACGCGTAC
AAAGTTATTCTAAATGAGACCTTCAATCTGTTACTTTTTTATGGAATTGT
TCATTTAATATTTTAGCAAATTAATTATCAGACATTTTCTAGATACAGTT
TTCCTTCCTTTTTGAAACAGGCCAAGCCACCCAGCTTTCCAACAAGCAAC
GATGAGTTTAGATCGAAGCAAGGATACTTGTCCTCAACCTACCATAGAAC
GTATACCATCGTACAAAAAGCAAACACAATCTGCAAATGCACCAACGCCT
ATCAATAGACAAACGCCTGCTCCCGCCCATCCGTTATCTGGTTTCACCTG
GTTCCAACCGGAGCTTGATCGTAGAGCGTGCgaaattaaattgaaccaaa
acagaAGGGTGAGTACGTCTACGTTTAGGATACTGTTCGCCCCTTGAGGT
ACTCTGCACCAGaatgtatctcacgtttatcgcttcgtagtacactctgt
gcgcattgtctgtttgataaaaaaattcccgtatggagacctctgcgatg
aagtatgatttatataaatagcaacacttctctcgtcttctccccctctc
tcaccaacactccatcgcagcggtcggtttgaaaaatctcaaatgagaaa
aggcaatgacaacagaccctctacggcaatgaattttgaaattagtcgta
gatactgggtctgtgtacaggcAAACTTTGAGGGAGTCAAAGGTTATTTC
TCTCTGCTACTCGAGATGTTCAATGGCTCGAACGATCACTGTCTACTTCT
TGGTGTTTAAAGTTATTGTGACTTAAAAGTATTCCTAAAAGAAGCAAGGT
GATTTTCCCCTGAATAAACCTTGACTAAAATTGGAAATTATGTTCATTTG
AAACTCATATGAATCCTTTTGTGTTTGTTATTTCGTAGTATTTTCAAGTC
AATCTCGTTGAATTGCCTGAAGGCTGCAAtacaacgctttttttataata
atacactttataagaatgtccatgataaaaatggccaaaaaattaaggat
aatgctaagaatatcaccatcatggaattttgctactcagctaagaatga
catttttagagcattttcaattataaattgccaattacccccaagtaagg
ctcactcctttcacaaaaatgccattttatgcttgagacgtatgtactaa
atgtcaaatctagtctgaattaggattctaacctaagaataatgtaagaa
tattttaggatgatttttttaagaaaatccatgataaaatggatttacac
cattcttatgaaAATAAGCGTGTATTTGAAGCACACATTTCAAGGTTTTC
TAAAatcttttctttactttttaggATGGTGACTTTGTGATACGAAACTC
ATCCAAAGCCGGTGTCCCATTTTCTATATCAATCTTTCACGATAATGTTG
TCCGCAATTTACAGTAAGTGTCCGAAAAAGTTTAACAATCGCTATTAAAT
GCTTTTCATTGATGTTAGGTGTATAATATTTTCTCAATGCAGAATTTCCT
aatctaccttatcggggaaaaaaatgtcggagttttatttaaaaaagatc
ttgtaaatcgacgtttaaagcacttatttcggttaataaagatgtaaaaa
atatagattttaattttggttggggtttaaagaattgggtaaaagttttg
gtcgggtgataaaatatcggggaaaaaattcgtagggggaaaatttcgtc
accccttcaaaattttcgtcacttccCCCCGACATTTTTCCCAGATAAGG
TATAGCAACGTAGGCAGAAATTTTCAAgatcaaaaattgaagaaaaagat
ttcgcgatttctttaaaaacaataatTCTAAAGAGCAAAACtttatggaa
aaaaatataaaaggtAGAAATGTGTCCGTCCATATATTCTGTGAATTTTC
TTACTTGATAGAAACTAGCCAAAATAggccaaaattacaaaattatctGC
CTAAAAAGTATTGAACACAAACCGAAGATTAATTCTTTTCCATTTATAGG
CTGCTTCAAAAAGACGGTAAAATGTACTTGGGAAGTTCTACTGAGGTAGG
TCATTCATTAAACACTTATACATACTCGAAGTGACCGGGAAGGGACTCGG
TGTCATCCTCCAAATAATGTTATATGCTATGTCATGCATGGTAACACGCT
CCATATTGAGTAATATTAGCCATAAACTCtctggtacctaatagccgggg
gggggaggaggttggaaaaaatctcaaaacttaataagcggggcgttaga
ataaaaatgtcctaggtggaaaattttcgaaaaattaattagtggggggg
cggctattaggtacccgagagtaagccTTAATACAATCACAGTAGAATTT
TCTTCTGCCTAAAACAGATTTTCACCTCTTAAAAACCATTTATTTATCAG
TCATATTTTTGATCAGCTAAGATGGATTAATGAGTTTCTCAATAACTTTT
TATTCTGCTATCTTTCAGGGGTTTGAAGGAGTACCTGAATTGGTATCGTA
TCATCAGAATAACGAAATCATACTCAACACTGGTGGTAAAGTGAAACTAC
TCAGGATTTGATGGCAATAGAAAATTTAGTACGCATTTATAAGgaagaaa
aacgaaaatatttttgggtaaTGTCAGAATGGGTGAATCCAACCAAAGCT
TTGTTGGAGCTTTTAAATTCAAGAATTCGGAAGAGAATTCGCCTTGTGGA
CTTTAAAGAGCTATTTATAAGTTCATTCAATTGCAACCGAAAATATGGGA
TCAACATTGATCACCATCATTGTTTTGGATCATTGCTTTTTTATTAACGG
AGCTTCAAGATTAATCTCCCGCCGCCTTACTAATAGATCTTATTGGAGTT
CGGGGGTattaaaatagaaatctcttaggaattcctcgggggaattctat
tgtaatactcccgaaacaattccacaatgcatcgcttttttagaaaaatc
aaaaacttcgaTAAGATCTATTTACATGGTCTCCGAAAAAGTCAGAACAC
TTACAGATatagaagaaaaaaagtattttttatgGGATATCTATGAAAGA
CACTTCGGAAAGGCCGATTTAAACAATCACAAAGACAAACTTGGTGATAG
AAAATGTTTCATATTGAACCAGAGTTGTTTTTGGTGATACTTAGTTAATT
TCTTGTTGCTTTTTagtttagatttttttgttatgtaaatacgaatttga
ttatttttctaaataattaTTGATAGATGAATAGGTTTTCTAATGGCgga
taattctttttttaaatatttgtaATTATTGGTAActtaaatttacagaa
aaatatttttttcaaatgtttataTTAAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000718XLOC_000718Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001327-exon-sc0000010-1491911889:140211..140254TCONS_00001327-exon-sc0000010-1491911889:140211..140254Clytia hemisphaericaexon
TCONS_00001327-exon-sc0000010-1510915933:140211..140254TCONS_00001327-exon-sc0000010-1510915933:140211..140254Clytia hemisphaericaexon
TCONS_00001327-exon-sc0000010-1575043694:140211..140254TCONS_00001327-exon-sc0000010-1575043694:140211..140254Clytia hemisphaericaexon
TCONS_00001327-exon-sc0000010-1491911889:140728..140843TCONS_00001327-exon-sc0000010-1491911889:140728..140843Clytia hemisphaericaexon
TCONS_00001327-exon-sc0000010-1510915933:140728..140843TCONS_00001327-exon-sc0000010-1510915933:140728..140843Clytia hemisphaericaexon
TCONS_00001327-exon-sc0000010-1575043694:140728..140843TCONS_00001327-exon-sc0000010-1575043694:140728..140843Clytia hemisphaericaexon
TCONS_00001327-exon-sc0000010-1491911889:145789..145840TCONS_00001327-exon-sc0000010-1491911889:145789..145840Clytia hemisphaericaexon
TCONS_00001327-exon-sc0000010-1510915933:145789..145840TCONS_00001327-exon-sc0000010-1510915933:145789..145840Clytia hemisphaericaexon
TCONS_00001327-exon-sc0000010-1575043694:145789..145840TCONS_00001327-exon-sc0000010-1575043694:145789..145840Clytia hemisphaericaexon
TCONS_00001327-exon-sc0000010-1491911889:146166..147125TCONS_00001327-exon-sc0000010-1491911889:146166..147125Clytia hemisphaericaexon
TCONS_00001327-exon-sc0000010-1510915933:146166..147125TCONS_00001327-exon-sc0000010-1510915933:146166..147125Clytia hemisphaericaexon
TCONS_00001327-exon-sc0000010-1575043694:146166..147125TCONS_00001327-exon-sc0000010-1575043694:146166..147125Clytia hemisphaericaexon
TCONS_00001327-exon-sc0000010-1491911889:147920..148090TCONS_00001327-exon-sc0000010-1491911889:147920..148090Clytia hemisphaericaexon
TCONS_00001327-exon-sc0000010-1510915933:147920..148090TCONS_00001327-exon-sc0000010-1510915933:147920..148090Clytia hemisphaericaexon
TCONS_00001327-exon-sc0000010-1575043694:147920..148090TCONS_00001327-exon-sc0000010-1575043694:147920..148090Clytia hemisphaericaexon
TCONS_00001327-exon-sc0000010-1491911889:148541..148561TCONS_00001327-exon-sc0000010-1491911889:148541..148561Clytia hemisphaericaexon
TCONS_00001327-exon-sc0000010-1510915933:148541..148561TCONS_00001327-exon-sc0000010-1510915933:148541..148561Clytia hemisphaericaexon
TCONS_00001327-exon-sc0000010-1575043694:148541..148561TCONS_00001327-exon-sc0000010-1575043694:148541..148561Clytia hemisphaericaexon
TCONS_00001327-exon-sc0000010-1491911889:148845..148919TCONS_00001327-exon-sc0000010-1491911889:148845..148919Clytia hemisphaericaexon
TCONS_00001327-exon-sc0000010-1510915933:148845..148919TCONS_00001327-exon-sc0000010-1510915933:148845..148919Clytia hemisphaericaexon
TCONS_00001327-exon-sc0000010-1575043694:148845..148919TCONS_00001327-exon-sc0000010-1575043694:148845..148919Clytia hemisphaericaexon
TCONS_00001327-exon-sc0000010-1491911889:149525..149567TCONS_00001327-exon-sc0000010-1491911889:149525..149567Clytia hemisphaericaexon
TCONS_00001327-exon-sc0000010-1510915933:149525..149567TCONS_00001327-exon-sc0000010-1510915933:149525..149567Clytia hemisphaericaexon
TCONS_00001327-exon-sc0000010-1575043694:149525..149567TCONS_00001327-exon-sc0000010-1575043694:149525..149567Clytia hemisphaericaexon
TCONS_00001327-exon-sc0000010-1491911889:150467..150643TCONS_00001327-exon-sc0000010-1491911889:150467..150643Clytia hemisphaericaexon
TCONS_00001327-exon-sc0000010-1510915933:150467..150643TCONS_00001327-exon-sc0000010-1510915933:150467..150643Clytia hemisphaericaexon
TCONS_00001327-exon-sc0000010-1575043694:150467..150643TCONS_00001327-exon-sc0000010-1575043694:150467..150643Clytia hemisphaericaexon
TCONS_00001327-exon-sc0000010-1491911889:151931..152168TCONS_00001327-exon-sc0000010-1491911889:151931..152168Clytia hemisphaericaexon
TCONS_00001327-exon-sc0000010-1510915933:151931..152168TCONS_00001327-exon-sc0000010-1510915933:151931..152168Clytia hemisphaericaexon
TCONS_00001327-exon-sc0000010-1575043694:151931..152168TCONS_00001327-exon-sc0000010-1575043694:151931..152168Clytia hemisphaericaexon
TCONS_00001327-exon-sc0000010-1491911889:153135..153223TCONS_00001327-exon-sc0000010-1491911889:153135..153223Clytia hemisphaericaexon
TCONS_00001327-exon-sc0000010-1510915933:153135..153223TCONS_00001327-exon-sc0000010-1510915933:153135..153223Clytia hemisphaericaexon
TCONS_00001327-exon-sc0000010-1575043694:153135..153223TCONS_00001327-exon-sc0000010-1575043694:153135..153223Clytia hemisphaericaexon
TCONS_00001327-exon-sc0000010-1491911889:153810..153855TCONS_00001327-exon-sc0000010-1491911889:153810..153855Clytia hemisphaericaexon
TCONS_00001327-exon-sc0000010-1510915933:153810..153855TCONS_00001327-exon-sc0000010-1510915933:153810..153855Clytia hemisphaericaexon
TCONS_00001327-exon-sc0000010-1575043694:153810..153855TCONS_00001327-exon-sc0000010-1575043694:153810..153855Clytia hemisphaericaexon
TCONS_00001327-exon-sc0000010-1491911889:154279..155140TCONS_00001327-exon-sc0000010-1491911889:154279..155140Clytia hemisphaericaexon
TCONS_00001327-exon-sc0000010-1510915933:154279..155140TCONS_00001327-exon-sc0000010-1510915933:154279..155140Clytia hemisphaericaexon
TCONS_00001327-exon-sc0000010-1575043694:154279..155140TCONS_00001327-exon-sc0000010-1575043694:154279..155140Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000010supercontigsc0000010:140211..155140 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.422757	0.461887	0.262982	0	0.403849	0.0164104	0.236836	0.388403	0.240981	0.173602	0.726898	0.41979	0.0766462	1.2975	0.279353	0.0594589	1.76168	1.35274	0.0783208	0.0838563	0.292119	0.615962	0.760787	2.48656	0.735138	0	0.683372	0.510498
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00001327 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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