TCONS_00001323 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001323
Unique NameTCONS_00001323
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2694

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001323 ID=TCONS_00001323|Name=TCONS_00001323|organism=Clytia hemisphaerica|type=transcript|length=2694bp
ACGACGAAGATTACGAAAATGCTGATGCAGGATTTTGTGAAGGCTCGCCA
CCTCTTCAGCCACCGCTTCAGCCACCACCAAGAACATACAGTCAAAATGT
GAACACTTTCAACAATAGTAATGATAGCATAGATGAATCCAAATCATACA
ACTATCTGtcgCAAGACGATCAAGATGATATATATGATACACCAGAAACT
GAAGAAATAGCTCGCCCACCACCTCTGCAACAGAAACCACAACGTCCAGG
AGGGTACGCACGACAACCACAACACCAAACTCCAATACCACAACACCAAT
CTCCAATACCACAACACCAATCTCCAATACCACAACACCAATCTCCAGCA
GCACACCAAGATAACTTCAATATGAGCAATAAACGCACACAAAACATTGA
TAAGCATCGTCAACAATCGTTCGCTAATAGTCGAGCAATGTTCGAACAGA
GATCAACTTCACCTCCACAACCAGCTATCAATCGATCAGCTAAACCACCT
GTACAACAACGTCGAAGTGATTCTAACAATAACCCGCCCTTCGCTCCCAA
ACCCAATATTTCTAAGCGCCCAACGATTCCAACGCCAGCAGCGCAACAAA
GGGTGGTACCGCCCCAACCGATCCAACTTCAAGAACCTCAACATTATGAA
ATGGATAACCAAAGCGAAGACTCGGGCTGCCATGAGGACTTTTACATTGA
GCCGCATCAAGCCAAAAATGCCGTCATACCCCACGAAGAAGAAACGTATG
AGGTCACAGACGGGCCAACCTCCCCGGTCGAAATCATATCCTCAAAACCT
AAAGGCATGCCTGGTCAGCAATTCATTACACAACTAAATCGAATGACCTT
AGAAAGATCTGCTCCCTCACTTCCCGCCTCACAGAGCAAACCAATGGCTG
GAAGACCTCTCGTACCGACCCCAGATCAAGAAGAAACTTATGAAATCGCA
CCTGAGAACCCTCGTTCACCACCATTACCCGGTAACCACCCTTCAGCCGC
AAAAAGCCCCGGCATCCCATCTCGACCTTTCGTTCAGAGCCGGCCACCAA
TGCCAGTACCATCACCACCACCACAGGAAGAAGAAACCTATGAAGTGACG
CCCGATCAAGCGCCCGCTTTACCACCCTCACATCCTTCCTCGAGAAAATC
TTCAAGTACTTCGTCTATAGGGGAATCACCGAGAACGTCCATTAAAGACA
GATTACCAAATCCTCGAGATAACATACAAGAAGATTATGAGATGATAACT
CATAGCCAAAGACCGCCTCCTCAACTTCCTATCTCTTCACGTCCATCTCC
ACCCCAACAAAGGCGCCCACCACCCTCGTTAGAACCAAAAGcgCGCAACG
AGAAACCGCAACGCCTTTTACCCTCGCCTTCGCAAGAAATCAACATTCCA
CCCAGAACGCCAAAAATGTCACAACCACAAAACTCGATGCCTCCAAAGCT
TATGGGAAGGCCAAGCCACCCAGCTTTCCAACAAGCAACGATGAGTTTAG
ATCGAAGCAAGGATACTTGTCCTCAACCTACCATAGAACGTATACCATCG
TACAAAAAGCAAACACAATCTGCAAATGCACCAACGCCTATCAATAGACA
AACGCCTGCTCCCGCCCATCCGTTATCTGGTTTCACCTGGTTCCAACCGG
AGCTTGATCGTAGAGCGTGCgaaattaaattgaaccaaaacagaAGGgAT
GGTGACTTTGTGATACGAAACTCATCCAAAGCCGGTGTCCCATTTTCTAT
ATCAATCTTTCACGATAATGTTGTCCGCAATTTACAGCTGCTTCAAAAAG
ACGGTAAAATGTACTTGGGAAGTTCTACTGAGGGGTTTGAAGGAGTACCT
GAATTGGTATCGTATCATCAGAATAACGAAATCATACTCAACACTGGTGG
TAAAGTGAAACTACTCAGGATTTGATGGCAATAGAAAATTTAGTACGCAT
TTATAAGgaagaaaaacgaaaatatttttgggtaaTGTCAGAATGGGTGA
ATCCAACCAAAGCTTTGTTGGAGCTTTTAAATTCAAGAATTCGGAAGAGA
ATTCGCCTTGTGGACTTTAAAGAGCTATTTATAAGTTCATTCAATTGCAA
CCGAAAATATGGGATCAACATTGATCACCATCATTGTTTTGGATCATTGC
TTTTTTATTAACGGAGCTTCAAGATTAATCTCCCGCCGCCTTACTAATAG
ATCTTATTGGAGTTCGGGGGTattaaaatagaaatctcttaggaattcct
cgggggaattctattgtaatactcccgaaacaattccacaatgcatcgct
tttttagaaaaatcaaaaacttcgaTAAGATCTATTTACATGGTCTCCGA
AAAAGTCAGAACACTTACAGATatagaagaaaaaaagtattttttatgGG
ATATCTATGAAAGACACTTCGGAAAGGCCGATTTAAACAATCACAAAGAC
AAACTTGGTGATAGAAAATGTTTCATATTGAACCAGAGTTGTTTTTGGTG
ATACTTAGTTAATTTCTTGTTGCTTTTTagtttagatttttttgttatgt
aaatacgaatttgattatttttctaaataattaTTGATAGATGAATAGGT
TTTCTAATGGCggataattctttttttaaatatttgtaATTATTGGTAAc
ttaaatttacagaaaaatatttttttcaaatgtttataTTAAAA
Run BLAST on NCBI

transcript from alignment at sc0000010:139249..155140+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001323 ID=TCONS_00001323|Name=TCONS_00001323|organism=Clytia hemisphaerica|type=transcript|length=15892bp|location=Sequence derived from alignment at sc0000010:139249..155140+ (Clytia hemisphaerica)
ACGACGAAGATTACGAAAATGCTGATGCAGGATTTTGTGAAGGTAGTAAC AATCGAGTATTATATATGTCAAAGTATCGTACTCTAGAGATTCACTATTT CACGGCTCGACTATTTATTCCTTAAAGATTAGAATGAATTGTACGGAACA TTAGAAGGAGCGGGGATCCGAATCGCGAATCCCTGGTTcgagacgctgac gcctttgaccacttagCCATCACTCCATAATTGCTCTATTTTGACTGACC ATTTGATACAATGGTTTTTCGAAATGAACTTTCAATTGTAGTAACTGTAT TTCTCTCAGCTTCTTGTAAATGTTTACGAATTTTTAGAAAGAAGAGAGGA ACGATAAATATGATAGCAATTAGAAACTTTGGTAATCATATTTATGGGAC TGTTGCTGTAAGGTTAATCTTTTTTGTCAAGTTGTGTACAGAAGATAACC TGTGTTAAATTTACTGTGTTAATTTTGTTGCGCaatctaaaatttttctc tTGATTAATTTTTAGGCTCGCCACCTCTTCAGCCACCGCTTCAGCCACCA CCAAGAACATACAGTCAAAATGTGAACACTTTCAACAATAGTAATGATAG CATAGATGAATCCAAATCATACAACTATCTGGTAGGTTATTTTGTCAACA GTTTTTGTACGACTTTTTACACGTGAACTTATATTTTGTATGCCCGAACA TAATTTTGTTCGCTTACTATTTCTTTGGTGATAATTGCATTTAGGTATTG GGTAACCCTTAAAACCCTTCCTCTGCTTATACTAAAAAGTCCTgttcaat gtgaaaaagatgTTGGACTTTGACTTGGTTTTCTTGAGTGTCTACATTGA TCGAGCCTAGTGTATAACTTCATAGAGCCCCCCCCCCNTGAGGATATTTA CGGAAATTCGTAACTTGAATACGTGACCGACCCTCCAtattttccctctt ttttttaCAGTTTGACGACGAAGATTACGAAAATGCTGATGCAGGATTTT GTGAAGGTAGTAACAATCGAGTATTATATATGTCAAAGTATCGTACTCTA GAGATTCACTATTTCACGGCTCGACTATTTATTCCTTAAAGATTAGAATG AATTGTACGGAACATTAGAAGGAGCGGGGATCCGAATCGCGAATCCCTGG TTcgagacgctgacgcctttgaccacttagCCATCACTCCATAATTGCTC TATTTTGACTGACCATTTGATACAATGGTTTTTCGAAATGAACTTTCAAT TGTAGTAACTGTATTTCTCTCAGCTTCTTGTAAATGTTTACGAATTTTTA GAAAGAAGAGAGGAACGATAAATATGATAGCAATTAGAAACTTTGGTAAT CATATTTATGGGACTGTTGCTGTAAGGTTAATCTTTTTTGTCAAGTTGTG TACAGAAGATAACCTGTGTTAAATTTACTGTGTTAATTTTGTTGCGCaat ctaaaatttttctctTGATTAATTTTTAGGCTCGCCACCTCTTCAGCCAC CGCTTCAGCCACCACCAAGAACATACAGTCAAAATGTGAACACTTTCAAC AATAGTAATGATAGCATAGATGAATCCAAATCATACAACTATCTGGTAGG TTATTTTGTCAACAGTTTTTGTACGACTTTTTACACGTGAACTTATATTT TGTATGCCCGAACATAATTTTGTTCGCTTACTATTTCTTTGGTGATAATT GCATTTAGGTATTGGGTAACCCTTAAAACCCTTCCTCTGCTTATACTAAA AAGTCCTgttcaatgtgaaaaagatgTTGGACTTTGACTTGGTTTTCTTG AGTGTCTACATTGATCGAGCCTAGTGTATAACTTCatagagccccccccc ccagcggttttcatgatggcgtgattggtGTGTGATCAGAGGAACCAACG TGATCATTatagaaaggaaatttaactTGTGATTGTgtgatttgaaaggt gactgggGGCCTCTTCATACAGTTCAACTCCTGATTCAGACAAACATAGA TTTTATATCATGATATTGCAATGCTCCTAAGTAATTTAAAATggttttaa aagtgttttttgtTCACACGGTATCGGTTTGCAGCACCTCATTTTACGAA GTTCtgatatttgttttttataagtaaTCAAATGTAACTTATCATTCAGG ACTAGGATTACCCCCAGTACCAAACAAGATAGGATCGGCTTACATAGTTT TAACACGGGGAATTTCGGCTGTGTGAAGCCATCAAAGTTCCATTTATAAA GTGCGAGATCCAGTTGAGAAAATctacatattggaaaaggtcttTTCGGG GAAAATGTTTTGAAGTTTTGGGGGTTTCTTTTCCTTGTAAGACTGATATG ATAGTGACTAAAATTCAACGAATTTAACCCATGGGAAAATGAAAGTAACA AACATTTTTGGAGAACTCAAAGTCTGTTAAAAAATTAGTATGCTCCAata tgatattttgaattttttcggTCAAGTAAAAAAGGTCAGGGGGATTATTT TGGGGAATTACTTAAAAAATGCCATGCAGTATTTGAAAGAGAAATTGCTT TATATGATATACTTTCTTAAACAAATACCTTTGCATCAATTATCGTGTTT AGATTAAAAAATTTGTGTGTACAGTACGTCaacattttgagaaattcaaa GTACACGATTtattagtctacacaatagacagatacaggcttttaggcct tactcttgttCTATAGGCACTgatataggcggccactagtgaaccccacc gggaattgcttattaataggtttaaacataatagacaacattcacaaaag atgtttatcaatagagattttaaataaaagaatgtttaaaacacagNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACGATTTATTAACAGGACT AAACACGTCtctttgtttttaatgtttatcTTGTTGTCGAAATCGGtgaa tcatttttctttttgtatacACAGGGCATCCCCTCTCATTAATTTTCTCG TCTTTTTTGATCGAACTTGTATCATATAAGTGTTTATACGCTTGATGATT GAAATctatgtttaaagattttttactgctgaaagtttaaaaaggaagtT TTTTAGGGAAGGctgtttaaggctttttgaggattttttaaaaaggtttt tggGGATTTTGGAAACAAGCCTTAGAATTATTCAAAAATGTATGAAGCCT TCCCTATGGTAAGTGATATTTTGCTTTGAATTCTTGAAATTATAATCTTA AATCTCTTTTTAGCAGGGGGGGTGTCGGTACTAAAACccaagacatatat gagtactacaaggttttttgacgatttttgacataccctcacctaatttt tgaaaaaggaattttagtacacatgtactgaaatttatttttacatttta gcaTAGTGACCACCTAAATAAGGCTTATTTTGGAATTCGGTTCGAAGAAT GTGGGTCTttggactttcaacaaaatgccAACTCTGGTTATTTAAGCTGT CAATGAACCTGATATATCTCTATCTATTCTAGATAAAGACTCAGAAACAG TCAAGACACTTTTGCCCTGCTCTACTTTAGTTATTGCAAAGATTGATGGG TTATTTTTCACCTCTAATTTACAGAggaacctttttcctcagttgagata aaaatttcctattgaaatattaatggggatacaaattctattgttccaag gttaaaaacccagtggggatatgattttggagtgcaatttttacacatgg aattttgagtggggatgaaatcaaagtcaatttcccagtagggctgaaat tcaagggtattctaccaccggggacaaaatttttgcttaatttgtgacac agggacgtatttaaatcttatatagagagtttttattttttcattttgcc taaaatgctcAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNtagttaaatttcctaaaatttggtgatttttagtactcatg tattaaaatttttcttaaatttcttgaagacccccacctaatttgggatt ttagtacacatggtactaaaatgcttttaggctttttttgtaataccacc acgtcactaaaagtcatgatgtctgaaattttagtaccgacccccccccc tctttttaGCTAAATTTATAGTTTTTCACACAAAGACtataagctctagt ttagacggccgactttctgccctgtctattctaattgttagagtaggcag aagtTGGGCAAAAAGTTGGCAGctaaagacattgcattgacgtcaaaaga gggcgatgcattgactttagacggcccactttatgcccactttgattcac aattagaatagacagggcaaaaagtgggctgtctaaactagagctaagct CGTCTGAAAGGGTAAAAGAAAATTGTCAATACTTTGTATGTATTGTCAGT ACCTGGTAACTTTCAGTTTCGGAAATTTTCAATGTCATTATTAAGTATTC TACTCATTTTATCTTGAATTTGGTCACAACTTTCATTTAGTATTGGCGTC ATAAATGAGGTATTATTTCCTTGAAAGTTTGTGAGAGATCTATGGGCCTG TGTCAAAAAATGTTGCCTTTGAAGTAGGTTTAAAGCATTTTGTACATTTA CGACGAATCTTTGTTAAAAAACAATAGGccgcaaaattaaacaccttttt tgacaacaaataatatgcccataacttttgatctagagaagttgggattT TGAtgcaatacacttttttgctcagtttgaagagttCTTACGTAGTATAG GTcttctttgattttgaagacccccaaaaatcatgaattttctgaccttt caattttgtttggaaacgcaaaaaatcgaaaattatgcAAAAACTGCAGT TTTTCAAggttggtaacattcaaattccgaatcagcaccctcaaattgac caaaatcaatCATGAaaggacattttgaaaaaaagtgaaacgttttggtG GCACTGCACTGGCCTACAAGTTTCCATTTCAATAGAGGGAAAGGTAATGA TGTTTATCTCTAAGCAATTATAAATGAACGATCTTAAAGCAGTAAATTGC TTTTATAAATGGTTTTGAAATTAGCTAACCGCGTCTTCTGAAATGATTTC TATTAACTTAAATTAAGTTTTGGCTCCTATGTCATATGATACGTTTCGTT TAAAAGAACATAGGCGGACAGTTTTATCATGAAATTTAAATTGATAGAGA TATTGTTAAGTAATCTGGTCTATTGAAAACAACTTTTTAGCGTTCATTAT CTGTAGAAAATAGATTGTAATCAAAGTCACAGCTTaggttgtctgtacac agacccgatatctacggctaatttcaaaaattcatttccgtagacaaacg tgagatacactctggtacagagtacagCTTAGGGATCTGGATATTACTTT TGCTTTTTGCGTTTTGTTCCTATTTCGAATTTAATCAGGTATAGATATTC TGTGATTGAAATATCTCAATTCTGCCCAATTTAGTAACTATTACTGCTAC TTTAATCATATAGCTTTCGTGcttaatatttttggaaaatagtttTGGAA GCCCTAGCGAATTTATTGTATTGTGTTAGCATCTTGAAGACATGGTTTTA TGGGATTTGATTGTCTCAATTCTGCTATAATTTAGTAAAAAATTTACTTC AATATACTTCACTCGTATAGCTTTTGTGCTCAATGTTTTATGtaggaata cacgtttttttataagaacaaactatataagaacataaggcttcactggc caaaatgttaagagcaagttaagaacattttaaggctttgtggactcaaa accacccaatttcttaggaaaatagtcaaaattattcacaaaatggtcaa aataagaacatgttcagaacaattttaggcttaaaactcaaaaagttcag aacattcaaggcttcaaaaaatttggatgtttttataaaaaaaacgcgtA GTCCTGGTAACCCTAGCAAATTTACTTGTATTTTCTCAATATCTTTACTt tccttttctttatttttcatttatcacatttttttttcagtcgCAAGACG ATCAAGATGATATATATGATACACCAGAAACTGAAGAAATAGGTTGGTGT ATTTGTATTTAAAGTTCTTGACTAGCATAATTGAATGTCCAAGTTATTTT GTGACCAGCCAAAAGTATAGTTTTttattctgtttgttttttttatacaa GTTCGTCAAAATTAGACGATATGTGGCGACTAGGACAGAAATAATTTGAT ATTGAACGAAAACAACTATGATGATCAGTTAATcatggaaaaattttaaa ccccaGATCAAAATATTATTCAGGAATATTATTACAGTCTTGGTCAACTT AATGTATACACCGAATGTCAAAGTTTGAAACAGTCCATTTTTCATACTTT CGATTCAACTTTTACAGCTCGCCCACCACCTCTGCAACAGAAACCACAAC GTCCAGGAGGGTACGCACGACAACCACAACACCAAACTCCAATACCACAA CACCAATCTCCAATACCACAACACCAATCTCCAATACCACAACACCAATC TCCAGCAGCACACCAAGATAACTTCAATATGAGCAATAAACGCACACAAA ACATTGATAAGCATCGTCAACAATCGTTCGCTAATAGTCGAGCAATGTTC GAACAGAGATCAACTTCACCTCCACAACCAGCTATCAATCGATCAGCTAA ACCACCTGTACAACAACGTCGAAGTGATTCTAACAATAACCCGCCCTTCG CTCCCAAACCCAATATTTCTAAGCGCCCAACGATTCCAACGCCAGCAGCG CAACAAAGGGTGGTACCGCCCCAACCGATCCAACTTCAAGAACCTCAACA TTATGAAATGGATAACCAAAGCGAAGACTCGGGCTGCCATGAGGACTTTT ACATTGAGCCGCATCAAGCCAAAAATGCCGTCATACCCCACGAAGAAGAA ACGTATGAGGTCACAGACGGGCCAACCTCCCCGGTCGAAATCATATCCTC AAAACCTAAAGGCATGCCTGGTCAGCAATTCATTACACAACTAAATCGAA TGACCTTAGAAAGATCTGCTCCCTCACTTCCCGCCTCACAGAGCAAACCA ATGGCTGGAAGACCTCTCGTACCGACCCCAGATCAAGAAGAAACTTATGA AATCGCACCTGAGAACCCTCGTTCACCACCATTACCCGGTAACCACCCTT CAGCCGCAAAAAGCCCCGGCATCCCATCTCGACCTTTCGTTCAGAGCCGG CCACCAATGCCAGTACCATCACCACCACCACAGGAAGAAGAAACCTATGA AGTGACGCCCGATCAAGCGCCCGCTTTACCACCCTCACATCCTTCCTCGA GAAAATCTTCAAGTACTTCGTCTATAGGTaagtaaaagagaaaaaaattt gccaGCCTGGTGATCTTTCTGGTTACTGTGAACATCACAGTTTGGTTTTT TCTGAAATTNAATTTGCCAACCTGGTGATCTTTCTGGTTACTGTGAACAT CACAGTTtggttttttctgaaatttaacCTTGTGAGGACGGACAATTTTA TCGCGTATGTCTCATCACATTTCTGATCATATAATGGAGAGCACGTATCC TCGTGTTATGTTCTAGCAGGTTACATCTTTATATATGTGAAAAAGTAAGA ATTTCTCTCcgactatattcactcaggagatttgggtggcagagcagcat atgcatttcgtccttattgaGACTCATCCATCAGATATATATCTATCAGT GAATTGAGTTTCCTTCAAAAGAACTCCTATCTTGTGATTTGATTGATTAA GCCTTCATCAAAAATATCCTGGATAATAATTGTGGCGTGCAACTTAGTGT CCGGTATCACAGCCTGCAGTTTCATTTCTCGTCTAATTTGGaactagcct agttaactaagcctgtattcacaaggctaggataCACCGCTAATGGCAAT ATAGcattttcggcgctttaaagattttttatatttacggattttatgtt tgccttggaatactggtAATTCAGTTACAagttaccatcagatttatcct agtgactgaatcaaaccaGTTTAGATTTCTAGGCTTATTTGGAGCTAGGT GGTAATAATATCTAAGCAGGTCATAAACTATTCGATTCATTCTACCATCA TCTATCTTCTAATACCTACAGGGGAATCACCGAGAACGTCCATTAAAGAC AGATTACCAAATCCTCGAGATAACATACAAGAAGATTATGAGATGATAAC TCATAGCCAAAGACCGCCTCCTCAACTTCCTATCTCTTCACGTCCATCTC CACCCCAACAAAGGCGCCCACCACCCTCGTTAGAACCAAAAGGTAATGAT CATTCTTCTCgttgaatttctttttgtacTTGCAGGTGTGTAGCAACTTA TTCACATTCTTTACCAAGTAGGATGTTTAGGACATTCATTATATTCCAGA TTTTTCCacgaaaaagttgattttgtattggaaatccaggagttacaaaa aacattttacctTAGAAATCCGCtatcgtccaccccctgtatgctGTTTC TCAACAGCATTTCttcaactcaaaatttcagaaaaaaaacttttatccaC TGACATTggaattatttttctaaaatttaaagtGAATTTTCGTGAGGGGT ATTGAAACTCTAGAAACTATGATCATTAATATTTTGGGGAATGAAAAATA GGATTCTGTTGATATGTTGATTCTTTGTATACAAAGAGAAAACACAAGTT GACATGCATGATAtcgttaatatttttttgttgctttttaagGTCAAGAA CCTGTATTACCTCGTAAgcataaatatttatatttcattattttgtaaGC TAAGTCGAGTCTTCATGGTCCCTTACttataaagattttgttttaaaaaa aaactacgaACGAGGGGGGGggatttaaaactttctgatagTTGGTCTTT TATTTTAGCTAGAAAACTTGAGCTTTTGGAAGCCGAAGATAGTGATCTGA TGACCCCTGATGCTGTATTGTGCTCCAAAGAACTTAATATTTCCTTTTCA GCCaaacatattttcaatatatccttcaaaatatttttcatttcagcgCG CAACGAGAAACCGCAACGCCTTTTACCCTCGCCTTCGCAAGAAATCAACA TTCCACCCAGAACGCCAAAAAGTAAGTCAACTCGTTATATGCACCATAGC AATGTCTTTCACGGACCCaacatctgattggttgaaattgacgtattgac tgaatttaccaatcagctattggttccgtgatgtaatatcagaagacatt gcaatggtgcatgtAATGAATAGGGTGTGTTTATAATTGATTGGTATTTT AAAGACAGGGATATCAATACGCTAACGAAGTTTTTTCTCTGTTGCCATCT TCTGCTCGAGAGAAAGATTCAAAGAAATTGTGTTTTATCTTTGAGACTTT CTGATCTGAAGGTACCAAACTTCACACTACTGATTGTATTATATGCTGCA ATTAAAACCATTGTATAACAAAAACCCTCGACACAAGATTACCTACGAAC CAGATTTTGCCAATTCTTTGGGGCGCACATGGTttatacccagctggcac acaacgttgtttcaacgttcatctaacgttatatggacgctgtgaacgtt agataaacgtcgaaaaaacgttatgtgccagctggatAGTAAATACTCTT GAATGATAAGTGAGGGTAATAAATTGTTGGCAATAGATAAATTGGAACAT CATGTCTTGTTTCTTTTTCCATACAGTGTCACAACCACAAAACTCGATGC CTCCAAAGCTTATGGGAAGGTAAGCAAAATACTGGGTTTTTGAAACTTTG CGTTTGTTCATGGTTCCTTTAGGTACGACATTTACATAGTTCAGGTGGAA AGCTTTCACGTAACTTTTCGCGAGGttgaaaattcgcgaaaattattAAA TAAGTTTTCGTAAAATAAAAGGAGTATGGAAGTCTCTAAGCCATAACGAC GTATAATTTGCTGAGATCACCatgtttgaatgaaaaagactttgtagtat tattttttgaaaaatacggAGTTAAAAGACAGACCATGtcgtgattttct aaaaaagataatTTGTATGTCTTAAACGTAAAACTTTTGAGATAGATGAT GAGTGGCCTAAATAATTATTGTCACGAAGTAGAGCCTTTGCTGAGTACTT TTTCTGTCTCGTTTTTGATGCTCTAAGGATGGTTACTTCCTCGACTTAAT GACTATTACTGGGACTTAAACGTCCTTAGAGATTTTGGAAATTTGGTCTA TCAGAATGTTCCTCGTTCTTTTTTACCCTAATTGAGTCCGGCTGTCCGGT GCGTTTTCTTTTTAATCGTTTTctttcactgacctttatatatccctgga ccaagttactcaagcaaaatattatgatcggagtttttttgaaattggta cccgtgGAGAGGGCGCTAGATCTAGTTTTGCTTGTACATTAATGATGTAT CATCGTTTGTCGTAAGGCAAAGTctcaaacactacaatggcttctttgag ggtaccaactttcaaaaacttcgatcaaaggtGGCGGATATTGCTTGGtt cagggatatataaaggtcagtgttttCTATACAAAAAAATGTAAGGTATC ATTTTTATGCAATGAGATCTGCAATATCCATCTGTGTCTCTTACCCCCGT GACTTACTACCATTGCAGTCTACCTACATTCAGTCTAAGCAACAGCTGGC TCGAAGATGTCAAGTGCGGACAAAGGAAAACCAGCCTCGATATGGGTGCC ATAAGTCCGAAATTATTTCGTCGTATAAATGACCGTCGTTCAAGCTTATC TGCCGATGAAATTCAAGTCAATCACTCAACTGCATGTGTCTTAGGGTAGG ATGATATGATAAATCAACATtgactaaaaaagaaaacatgacaCACAAAG AGACATGGCGTGACAGTTGAGTTCCGGACAAATATAATAGGCTTACTGTA ATCCGTTTCCAGTACAGTGTGTCCCGAATAAAGTTATCAAGAAAATCTTG GCAAAATCAATCAACTCGTTGGCATATTACCGGGTGTGTCAGAAATAAGT TACcctttttgatttgatattgtaggcTTTTCGCCTTTTCTgacaatttt taaaattgacattttaggtttttaaacataacttttgaacccatgaagta aaattaaaaagtaatacaccaaattttaagttaggctttcctctgtATGA TtcagaaacttttgaaaaacctCTCAACTACTGACaacaatattaaatta aaaaaggATAACTAATTTCTGGAACACCCGGTAGTTTAAAAAGATATTTC GATTCATTCCTAGAACAAACAACTAAATACAAGCCAGTTGTAAATCGTTA ACCCTCATACTGTGATGGAGGATTTTTCATATACTAAAAACTGACCTCTT GATTCGGGACATGCTGTAAATTGCATGTTAACATGGAAATAACTGAACAA TCAATGTTCATCAAGGATGTGAGACTTTCAATAATGTTGAAACTGGTGAC GGactaaaattctgaaaataaaatgcaaaaaaaaaaaatacattagTTTA CNAGACTAaaattctgaagaaaaaaaatgcaaaaaaaaaaatacattagT TTACTTTCGACGAGTAGATTTGCTTCTTTACTTGTTCGTGAAaataaatt tcgcgaaattgaatgaaatggaaatttttaaagttttgttttcGACGTTT TGTAACTCCGAACGTTTTAGTTTTGGCGAAAGCTTGACAtcttttggacc attttcagttgatttaaGGCCTTCTAGGAAAATACATCAACGCGAAACGT TTCAAAATATTGACTTAATAATGGAAATAAATCGAGAAATTTGTCTCGCA GAATTGAACCTtgtgaaaattaatccaattaaagcaCACTGACAAAGAAC AGTTTAAACAATGAAATATTGATGATTTTGACGAACATTACCTTAACATA ACCAATGACATACGAAATATCGActttacaaaatagaaatactTAACCAC TCATACGCGTACAAAGTTATTCTAAATGAGACCTTCAATCTGTTACTTTT TTATGGAATTGTTCATTTAATATTTTAGCAAATTAATTATCAGACATTTT CTAGATACAGTTTTCCTTCCTTTTTGAAACAGGCCAAGCCACCCAGCTTT CCAACAAGCAACGATGAGTTTAGATCGAAGCAAGGATACTTGTCCTCAAC CTACCATAGAACGTATACCATCGTACAAAAAGCAAACACAATCTGCAAAT GCACCAACGCCTATCAATAGACAAACGCCTGCTCCCGCCCATCCGTTATC TGGTTTCACCTGGTTCCAACCGGAGCTTGATCGTAGAGCGTGCgaaatta aattgaaccaaaacagaAGGGTGAGTACGTCTACGTTTAGGATACTGTTC GCCCCTTGAGGTACTCTGCACCAGaatgtatctcacgtttatcgcttcgt agtacactctgtgcgcattgtctgtttgataaaaaaattcccgtatggag acctctgcgatgaagtatgatttatataaatagcaacacttctctcgtct tctccccctctctcaccaacactccatcgcagcggtcggtttgaaaaatc tcaaatgagaaaaggcaatgacaacagaccctctacggcaatgaattttg aaattagtcgtagatactgggtctgtgtacaggcAAACTTTGAGGGAGTC AAAGGTTATTTCTCTCTGCTACTCGAGATGTTCAATGGCTCGAACGATCA CTGTCTACTTCTTGGTGTTTAAAGTTATTGTGACTTAAAAGTATTCCTAA AAGAAGCAAGGTGATTTTCCCCTGAATAAACCTTGACTAAAATTGGAAAT TATGTTCATTTGAAACTCATATGAATCCTTTTGTGTTTGTTATTTCGTAG TATTTTCAAGTCAATCTCGTTGAATTGCCTGAAGGCTGCAAtacaacgct ttttttataataatacactttataagaatgtccatgataaaaatggccaa aaaattaaggataatgctaagaatatcaccatcatggaattttgctactc agctaagaatgacatttttagagcattttcaattataaattgccaattac ccccaagtaaggctcactcctttcacaaaaatgccattttatgcttgaga cgtatgtactaaatgtcaaatctagtctgaattaggattctaacctaaga ataatgtaagaatattttaggatgatttttttaagaaaatccatgataaa atggatttacaccattcttatgaaAATAAGCGTGTATTTGAAGCACACAT TTCAAGGTTTTCTAAAatcttttctttactttttaggATGGTGACTTTGT GATACGAAACTCATCCAAAGCCGGTGTCCCATTTTCTATATCAATCTTTC ACGATAATGTTGTCCGCAATTTACAGTAAGTGTCCGAAAAAGTTTAACAA TCGCTATTAAATGCTTTTCATTGATGTTAGGTGTATAATATTTTCTCAAT GCAGAATTTCCTaatctaccttatcggggaaaaaaatgtcggagttttat ttaaaaaagatcttgtaaatcgacgtttaaagcacttatttcggttaata aagatgtaaaaaatatagattttaattttggttggggtttaaagaattgg gtaaaagttttggtcgggtgataaaatatcggggaaaaaattcgtagggg gaaaatttcgtcaccccttcaaaattttcgtcacttccCCCCGACATTTT TCCCAGATAAGGTATAGCAACGTAGGCAGAAATTTTCAAgatcaaaaatt gaagaaaaagatttcgcgatttctttaaaaacaataatTCTAAAGAGCAA AACtttatggaaaaaaatataaaaggtAGAAATGTGTCCGTCCATATATT CTGTGAATTTTCTTACTTGATAGAAACTAGCCAAAATAggccaaaattac aaaattatctGCCTAAAAAGTATTGAACACAAACCGAAGATTAATTCTTT TCCATTTATAGGCTGCTTCAAAAAGACGGTAAAATGTACTTGGGAAGTTC TACTGAGGTAGGTCATTCATTAAACACTTATACATACTCGAAGTGACCGG GAAGGGACTCGGTGTCATCCTCCAAATAATGTTATATGCTATGTCATGCA TGGTAACACGCTCCATATTGAGTAATATTAGCCATAAACTCtctggtacc taatagccgggggggggaggaggttggaaaaaatctcaaaacttaataag cggggcgttagaataaaaatgtcctaggtggaaaattttcgaaaaattaa ttagtgggggggcggctattaggtacccgagagtaagccTTAATACAATC ACAGTAGAATTTTCTTCTGCCTAAAACAGATTTTCACCTCTTAAAAACCA TTTATTTATCAGTCATATTTTTGATCAGCTAAGATGGATTAATGAGTTTC TCAATAACTTTTTATTCTGCTATCTTTCAGGGGTTTGAAGGAGTACCTGA ATTGGTATCGTATCATCAGAATAACGAAATCATACTCAACACTGGTGGTA AAGTGAAACTACTCAGGATTTGATGGCAATAGAAAATTTAGTACGCATTT ATAAGgaagaaaaacgaaaatatttttgggtaaTGTCAGAATGGGTGAAT CCAACCAAAGCTTTGTTGGAGCTTTTAAATTCAAGAATTCGGAAGAGAAT TCGCCTTGTGGACTTTAAAGAGCTATTTATAAGTTCATTCAATTGCAACC GAAAATATGGGATCAACATTGATCACCATCATTGTTTTGGATCATTGCTT TTTTATTAACGGAGCTTCAAGATTAATCTCCCGCCGCCTTACTAATAGAT CTTATTGGAGTTCGGGGGTattaaaatagaaatctcttaggaattcctcg ggggaattctattgtaatactcccgaaacaattccacaatgcatcgcttt tttagaaaaatcaaaaacttcgaTAAGATCTATTTACATGGTCTCCGAAA AAGTCAGAACACTTACAGATatagaagaaaaaaagtattttttatgGGAT ATCTATGAAAGACACTTCGGAAAGGCCGATTTAAACAATCACAAAGACAA ACTTGGTGATAGAAAATGTTTCATATTGAACCAGAGTTGTTTTTGGTGAT ACTTAGTTAATTTCTTGTTGCTTTTTagtttagatttttttgttatgtaa atacgaatttgattatttttctaaataattaTTGATAGATGAATAGGTTT TCTAATGGCggataattctttttttaaatatttgtaATTATTGGTAActt aaatttacagaaaaatatttttttcaaatgtttataTTAAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000718XLOC_000718Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001323-exon-sc0000010-1491911889:139249..139290TCONS_00001323-exon-sc0000010-1491911889:139249..139290Clytia hemisphaericaexon
TCONS_00001323-exon-sc0000010-1510915933:139249..139290TCONS_00001323-exon-sc0000010-1510915933:139249..139290Clytia hemisphaericaexon
TCONS_00001323-exon-sc0000010-1575043694:139249..139290TCONS_00001323-exon-sc0000010-1575043694:139249..139290Clytia hemisphaericaexon
TCONS_00001323-exon-sc0000010-1491911889:140728..140843TCONS_00001323-exon-sc0000010-1491911889:140728..140843Clytia hemisphaericaexon
TCONS_00001323-exon-sc0000010-1510915933:140728..140843TCONS_00001323-exon-sc0000010-1510915933:140728..140843Clytia hemisphaericaexon
TCONS_00001323-exon-sc0000010-1575043694:140728..140843TCONS_00001323-exon-sc0000010-1575043694:140728..140843Clytia hemisphaericaexon
TCONS_00001323-exon-sc0000010-1491911889:145789..145840TCONS_00001323-exon-sc0000010-1491911889:145789..145840Clytia hemisphaericaexon
TCONS_00001323-exon-sc0000010-1510915933:145789..145840TCONS_00001323-exon-sc0000010-1510915933:145789..145840Clytia hemisphaericaexon
TCONS_00001323-exon-sc0000010-1575043694:145789..145840TCONS_00001323-exon-sc0000010-1575043694:145789..145840Clytia hemisphaericaexon
TCONS_00001323-exon-sc0000010-1491911889:146166..147125TCONS_00001323-exon-sc0000010-1491911889:146166..147125Clytia hemisphaericaexon
TCONS_00001323-exon-sc0000010-1510915933:146166..147125TCONS_00001323-exon-sc0000010-1510915933:146166..147125Clytia hemisphaericaexon
TCONS_00001323-exon-sc0000010-1575043694:146166..147125TCONS_00001323-exon-sc0000010-1575043694:146166..147125Clytia hemisphaericaexon
TCONS_00001323-exon-sc0000010-1491911889:147920..148090TCONS_00001323-exon-sc0000010-1491911889:147920..148090Clytia hemisphaericaexon
TCONS_00001323-exon-sc0000010-1510915933:147920..148090TCONS_00001323-exon-sc0000010-1510915933:147920..148090Clytia hemisphaericaexon
TCONS_00001323-exon-sc0000010-1575043694:147920..148090TCONS_00001323-exon-sc0000010-1575043694:147920..148090Clytia hemisphaericaexon
TCONS_00001323-exon-sc0000010-1491911889:148845..148919TCONS_00001323-exon-sc0000010-1491911889:148845..148919Clytia hemisphaericaexon
TCONS_00001323-exon-sc0000010-1510915933:148845..148919TCONS_00001323-exon-sc0000010-1510915933:148845..148919Clytia hemisphaericaexon
TCONS_00001323-exon-sc0000010-1575043694:148845..148919TCONS_00001323-exon-sc0000010-1575043694:148845..148919Clytia hemisphaericaexon
TCONS_00001323-exon-sc0000010-1491911889:149525..149567TCONS_00001323-exon-sc0000010-1491911889:149525..149567Clytia hemisphaericaexon
TCONS_00001323-exon-sc0000010-1510915933:149525..149567TCONS_00001323-exon-sc0000010-1510915933:149525..149567Clytia hemisphaericaexon
TCONS_00001323-exon-sc0000010-1575043694:149525..149567TCONS_00001323-exon-sc0000010-1575043694:149525..149567Clytia hemisphaericaexon
TCONS_00001323-exon-sc0000010-1491911889:151931..152168TCONS_00001323-exon-sc0000010-1491911889:151931..152168Clytia hemisphaericaexon
TCONS_00001323-exon-sc0000010-1510915933:151931..152168TCONS_00001323-exon-sc0000010-1510915933:151931..152168Clytia hemisphaericaexon
TCONS_00001323-exon-sc0000010-1575043694:151931..152168TCONS_00001323-exon-sc0000010-1575043694:151931..152168Clytia hemisphaericaexon
TCONS_00001323-exon-sc0000010-1491911889:153135..153223TCONS_00001323-exon-sc0000010-1491911889:153135..153223Clytia hemisphaericaexon
TCONS_00001323-exon-sc0000010-1510915933:153135..153223TCONS_00001323-exon-sc0000010-1510915933:153135..153223Clytia hemisphaericaexon
TCONS_00001323-exon-sc0000010-1575043694:153135..153223TCONS_00001323-exon-sc0000010-1575043694:153135..153223Clytia hemisphaericaexon
TCONS_00001323-exon-sc0000010-1491911889:153810..153855TCONS_00001323-exon-sc0000010-1491911889:153810..153855Clytia hemisphaericaexon
TCONS_00001323-exon-sc0000010-1510915933:153810..153855TCONS_00001323-exon-sc0000010-1510915933:153810..153855Clytia hemisphaericaexon
TCONS_00001323-exon-sc0000010-1575043694:153810..153855TCONS_00001323-exon-sc0000010-1575043694:153810..153855Clytia hemisphaericaexon
TCONS_00001323-exon-sc0000010-1491911889:154279..155140TCONS_00001323-exon-sc0000010-1491911889:154279..155140Clytia hemisphaericaexon
TCONS_00001323-exon-sc0000010-1510915933:154279..155140TCONS_00001323-exon-sc0000010-1510915933:154279..155140Clytia hemisphaericaexon
TCONS_00001323-exon-sc0000010-1575043694:154279..155140TCONS_00001323-exon-sc0000010-1575043694:154279..155140Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000010supercontigsc0000010:139249..155140 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.000914267 0.00248777 0.0881851 0.00999307 0.728977 5.35594e-06 3.52805e-07 0.000968299 0.00365283 0.000451999 0.000426753 4.82438e-10 2.43461e-10 0 5.34936e-07 2.76162e-06 0.00117716 8.96333e-08 0 8.1165e-06 0.61852 0.00209034 0.000114871 0.0588615 0 0 2.12235e-07 1.68137e-05 1.90693e-07 0.000100391
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00001323 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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