TCONS_00001323 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001323
Unique NameTCONS_00001323
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2694

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001323 ID=TCONS_00001323|Name=TCONS_00001323|organism=Clytia hemisphaerica|type=transcript|length=2694bp
ACGACGAAGATTACGAAAATGCTGATGCAGGATTTTGTGAAGGCTCGCCA
CCTCTTCAGCCACCGCTTCAGCCACCACCAAGAACATACAGTCAAAATGT
GAACACTTTCAACAATAGTAATGATAGCATAGATGAATCCAAATCATACA
ACTATCTGtcgCAAGACGATCAAGATGATATATATGATACACCAGAAACT
GAAGAAATAGCTCGCCCACCACCTCTGCAACAGAAACCACAACGTCCAGG
AGGGTACGCACGACAACCACAACACCAAACTCCAATACCACAACACCAAT
CTCCAATACCACAACACCAATCTCCAATACCACAACACCAATCTCCAGCA
GCACACCAAGATAACTTCAATATGAGCAATAAACGCACACAAAACATTGA
TAAGCATCGTCAACAATCGTTCGCTAATAGTCGAGCAATGTTCGAACAGA
GATCAACTTCACCTCCACAACCAGCTATCAATCGATCAGCTAAACCACCT
GTACAACAACGTCGAAGTGATTCTAACAATAACCCGCCCTTCGCTCCCAA
ACCCAATATTTCTAAGCGCCCAACGATTCCAACGCCAGCAGCGCAACAAA
GGGTGGTACCGCCCCAACCGATCCAACTTCAAGAACCTCAACATTATGAA
ATGGATAACCAAAGCGAAGACTCGGGCTGCCATGAGGACTTTTACATTGA
GCCGCATCAAGCCAAAAATGCCGTCATACCCCACGAAGAAGAAACGTATG
AGGTCACAGACGGGCCAACCTCCCCGGTCGAAATCATATCCTCAAAACCT
AAAGGCATGCCTGGTCAGCAATTCATTACACAACTAAATCGAATGACCTT
AGAAAGATCTGCTCCCTCACTTCCCGCCTCACAGAGCAAACCAATGGCTG
GAAGACCTCTCGTACCGACCCCAGATCAAGAAGAAACTTATGAAATCGCA
CCTGAGAACCCTCGTTCACCACCATTACCCGGTAACCACCCTTCAGCCGC
AAAAAGCCCCGGCATCCCATCTCGACCTTTCGTTCAGAGCCGGCCACCAA
TGCCAGTACCATCACCACCACCACAGGAAGAAGAAACCTATGAAGTGACG
CCCGATCAAGCGCCCGCTTTACCACCCTCACATCCTTCCTCGAGAAAATC
TTCAAGTACTTCGTCTATAGGGGAATCACCGAGAACGTCCATTAAAGACA
GATTACCAAATCCTCGAGATAACATACAAGAAGATTATGAGATGATAACT
CATAGCCAAAGACCGCCTCCTCAACTTCCTATCTCTTCACGTCCATCTCC
ACCCCAACAAAGGCGCCCACCACCCTCGTTAGAACCAAAAGcgCGCAACG
AGAAACCGCAACGCCTTTTACCCTCGCCTTCGCAAGAAATCAACATTCCA
CCCAGAACGCCAAAAATGTCACAACCACAAAACTCGATGCCTCCAAAGCT
TATGGGAAGGCCAAGCCACCCAGCTTTCCAACAAGCAACGATGAGTTTAG
ATCGAAGCAAGGATACTTGTCCTCAACCTACCATAGAACGTATACCATCG
TACAAAAAGCAAACACAATCTGCAAATGCACCAACGCCTATCAATAGACA
AACGCCTGCTCCCGCCCATCCGTTATCTGGTTTCACCTGGTTCCAACCGG
AGCTTGATCGTAGAGCGTGCgaaattaaattgaaccaaaacagaAGGgAT
GGTGACTTTGTGATACGAAACTCATCCAAAGCCGGTGTCCCATTTTCTAT
ATCAATCTTTCACGATAATGTTGTCCGCAATTTACAGCTGCTTCAAAAAG
ACGGTAAAATGTACTTGGGAAGTTCTACTGAGGGGTTTGAAGGAGTACCT
GAATTGGTATCGTATCATCAGAATAACGAAATCATACTCAACACTGGTGG
TAAAGTGAAACTACTCAGGATTTGATGGCAATAGAAAATTTAGTACGCAT
TTATAAGgaagaaaaacgaaaatatttttgggtaaTGTCAGAATGGGTGA
ATCCAACCAAAGCTTTGTTGGAGCTTTTAAATTCAAGAATTCGGAAGAGA
ATTCGCCTTGTGGACTTTAAAGAGCTATTTATAAGTTCATTCAATTGCAA
CCGAAAATATGGGATCAACATTGATCACCATCATTGTTTTGGATCATTGC
TTTTTTATTAACGGAGCTTCAAGATTAATCTCCCGCCGCCTTACTAATAG
ATCTTATTGGAGTTCGGGGGTattaaaatagaaatctcttaggaattcct
cgggggaattctattgtaatactcccgaaacaattccacaatgcatcgct
tttttagaaaaatcaaaaacttcgaTAAGATCTATTTACATGGTCTCCGA
AAAAGTCAGAACACTTACAGATatagaagaaaaaaagtattttttatgGG
ATATCTATGAAAGACACTTCGGAAAGGCCGATTTAAACAATCACAAAGAC
AAACTTGGTGATAGAAAATGTTTCATATTGAACCAGAGTTGTTTTTGGTG
ATACTTAGTTAATTTCTTGTTGCTTTTTagtttagatttttttgttatgt
aaatacgaatttgattatttttctaaataattaTTGATAGATGAATAGGT
TTTCTAATGGCggataattctttttttaaatatttgtaATTATTGGTAAc
ttaaatttacagaaaaatatttttttcaaatgtttataTTAAAA
Run BLAST on NCBI

transcript from alignment at sc0000010:139249..155140+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001323 ID=TCONS_00001323|Name=TCONS_00001323|organism=Clytia hemisphaerica|type=transcript|length=15892bp|location=Sequence derived from alignment at sc0000010:139249..155140+ (Clytia hemisphaerica)
ACGACGAAGATTACGAAAATGCTGATGCAGGATTTTGTGAAGGTAGTAAC
AATCGAGTATTATATATGTCAAAGTATCGTACTCTAGAGATTCACTATTT
CACGGCTCGACTATTTATTCCTTAAAGATTAGAATGAATTGTACGGAACA
TTAGAAGGAGCGGGGATCCGAATCGCGAATCCCTGGTTcgagacgctgac
gcctttgaccacttagCCATCACTCCATAATTGCTCTATTTTGACTGACC
ATTTGATACAATGGTTTTTCGAAATGAACTTTCAATTGTAGTAACTGTAT
TTCTCTCAGCTTCTTGTAAATGTTTACGAATTTTTAGAAAGAAGAGAGGA
ACGATAAATATGATAGCAATTAGAAACTTTGGTAATCATATTTATGGGAC
TGTTGCTGTAAGGTTAATCTTTTTTGTCAAGTTGTGTACAGAAGATAACC
TGTGTTAAATTTACTGTGTTAATTTTGTTGCGCaatctaaaatttttctc
tTGATTAATTTTTAGGCTCGCCACCTCTTCAGCCACCGCTTCAGCCACCA
CCAAGAACATACAGTCAAAATGTGAACACTTTCAACAATAGTAATGATAG
CATAGATGAATCCAAATCATACAACTATCTGGTAGGTTATTTTGTCAACA
GTTTTTGTACGACTTTTTACACGTGAACTTATATTTTGTATGCCCGAACA
TAATTTTGTTCGCTTACTATTTCTTTGGTGATAATTGCATTTAGGTATTG
GGTAACCCTTAAAACCCTTCCTCTGCTTATACTAAAAAGTCCTgttcaat
gtgaaaaagatgTTGGACTTTGACTTGGTTTTCTTGAGTGTCTACATTGA
TCGAGCCTAGTGTATAACTTCATAGAGCCCCCCCCCCNTGAGGATATTTA
CGGAAATTCGTAACTTGAATACGTGACCGACCCTCCAtattttccctctt
ttttttaCAGTTTGACGACGAAGATTACGAAAATGCTGATGCAGGATTTT
GTGAAGGTAGTAACAATCGAGTATTATATATGTCAAAGTATCGTACTCTA
GAGATTCACTATTTCACGGCTCGACTATTTATTCCTTAAAGATTAGAATG
AATTGTACGGAACATTAGAAGGAGCGGGGATCCGAATCGCGAATCCCTGG
TTcgagacgctgacgcctttgaccacttagCCATCACTCCATAATTGCTC
TATTTTGACTGACCATTTGATACAATGGTTTTTCGAAATGAACTTTCAAT
TGTAGTAACTGTATTTCTCTCAGCTTCTTGTAAATGTTTACGAATTTTTA
GAAAGAAGAGAGGAACGATAAATATGATAGCAATTAGAAACTTTGGTAAT
CATATTTATGGGACTGTTGCTGTAAGGTTAATCTTTTTTGTCAAGTTGTG
TACAGAAGATAACCTGTGTTAAATTTACTGTGTTAATTTTGTTGCGCaat
ctaaaatttttctctTGATTAATTTTTAGGCTCGCCACCTCTTCAGCCAC
CGCTTCAGCCACCACCAAGAACATACAGTCAAAATGTGAACACTTTCAAC
AATAGTAATGATAGCATAGATGAATCCAAATCATACAACTATCTGGTAGG
TTATTTTGTCAACAGTTTTTGTACGACTTTTTACACGTGAACTTATATTT
TGTATGCCCGAACATAATTTTGTTCGCTTACTATTTCTTTGGTGATAATT
GCATTTAGGTATTGGGTAACCCTTAAAACCCTTCCTCTGCTTATACTAAA
AAGTCCTgttcaatgtgaaaaagatgTTGGACTTTGACTTGGTTTTCTTG
AGTGTCTACATTGATCGAGCCTAGTGTATAACTTCatagagccccccccc
ccagcggttttcatgatggcgtgattggtGTGTGATCAGAGGAACCAACG
TGATCATTatagaaaggaaatttaactTGTGATTGTgtgatttgaaaggt
gactgggGGCCTCTTCATACAGTTCAACTCCTGATTCAGACAAACATAGA
TTTTATATCATGATATTGCAATGCTCCTAAGTAATTTAAAATggttttaa
aagtgttttttgtTCACACGGTATCGGTTTGCAGCACCTCATTTTACGAA
GTTCtgatatttgttttttataagtaaTCAAATGTAACTTATCATTCAGG
ACTAGGATTACCCCCAGTACCAAACAAGATAGGATCGGCTTACATAGTTT
TAACACGGGGAATTTCGGCTGTGTGAAGCCATCAAAGTTCCATTTATAAA
GTGCGAGATCCAGTTGAGAAAATctacatattggaaaaggtcttTTCGGG
GAAAATGTTTTGAAGTTTTGGGGGTTTCTTTTCCTTGTAAGACTGATATG
ATAGTGACTAAAATTCAACGAATTTAACCCATGGGAAAATGAAAGTAACA
AACATTTTTGGAGAACTCAAAGTCTGTTAAAAAATTAGTATGCTCCAata
tgatattttgaattttttcggTCAAGTAAAAAAGGTCAGGGGGATTATTT
TGGGGAATTACTTAAAAAATGCCATGCAGTATTTGAAAGAGAAATTGCTT
TATATGATATACTTTCTTAAACAAATACCTTTGCATCAATTATCGTGTTT
AGATTAAAAAATTTGTGTGTACAGTACGTCaacattttgagaaattcaaa
GTACACGATTtattagtctacacaatagacagatacaggcttttaggcct
tactcttgttCTATAGGCACTgatataggcggccactagtgaaccccacc
gggaattgcttattaataggtttaaacataatagacaacattcacaaaag
atgtttatcaatagagattttaaataaaagaatgtttaaaacacagNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACGATTTATTAACAGGACT
AAACACGTCtctttgtttttaatgtttatcTTGTTGTCGAAATCGGtgaa
tcatttttctttttgtatacACAGGGCATCCCCTCTCATTAATTTTCTCG
TCTTTTTTGATCGAACTTGTATCATATAAGTGTTTATACGCTTGATGATT
GAAATctatgtttaaagattttttactgctgaaagtttaaaaaggaagtT
TTTTAGGGAAGGctgtttaaggctttttgaggattttttaaaaaggtttt
tggGGATTTTGGAAACAAGCCTTAGAATTATTCAAAAATGTATGAAGCCT
TCCCTATGGTAAGTGATATTTTGCTTTGAATTCTTGAAATTATAATCTTA
AATCTCTTTTTAGCAGGGGGGGTGTCGGTACTAAAACccaagacatatat
gagtactacaaggttttttgacgatttttgacataccctcacctaatttt
tgaaaaaggaattttagtacacatgtactgaaatttatttttacatttta
gcaTAGTGACCACCTAAATAAGGCTTATTTTGGAATTCGGTTCGAAGAAT
GTGGGTCTttggactttcaacaaaatgccAACTCTGGTTATTTAAGCTGT
CAATGAACCTGATATATCTCTATCTATTCTAGATAAAGACTCAGAAACAG
TCAAGACACTTTTGCCCTGCTCTACTTTAGTTATTGCAAAGATTGATGGG
TTATTTTTCACCTCTAATTTACAGAggaacctttttcctcagttgagata
aaaatttcctattgaaatattaatggggatacaaattctattgttccaag
gttaaaaacccagtggggatatgattttggagtgcaatttttacacatgg
aattttgagtggggatgaaatcaaagtcaatttcccagtagggctgaaat
tcaagggtattctaccaccggggacaaaatttttgcttaatttgtgacac
agggacgtatttaaatcttatatagagagtttttattttttcattttgcc
taaaatgctcAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNtagttaaatttcctaaaatttggtgatttttagtactcatg
tattaaaatttttcttaaatttcttgaagacccccacctaatttgggatt
ttagtacacatggtactaaaatgcttttaggctttttttgtaataccacc
acgtcactaaaagtcatgatgtctgaaattttagtaccgacccccccccc
tctttttaGCTAAATTTATAGTTTTTCACACAAAGACtataagctctagt
ttagacggccgactttctgccctgtctattctaattgttagagtaggcag
aagtTGGGCAAAAAGTTGGCAGctaaagacattgcattgacgtcaaaaga
gggcgatgcattgactttagacggcccactttatgcccactttgattcac
aattagaatagacagggcaaaaagtgggctgtctaaactagagctaagct
CGTCTGAAAGGGTAAAAGAAAATTGTCAATACTTTGTATGTATTGTCAGT
ACCTGGTAACTTTCAGTTTCGGAAATTTTCAATGTCATTATTAAGTATTC
TACTCATTTTATCTTGAATTTGGTCACAACTTTCATTTAGTATTGGCGTC
ATAAATGAGGTATTATTTCCTTGAAAGTTTGTGAGAGATCTATGGGCCTG
TGTCAAAAAATGTTGCCTTTGAAGTAGGTTTAAAGCATTTTGTACATTTA
CGACGAATCTTTGTTAAAAAACAATAGGccgcaaaattaaacaccttttt
tgacaacaaataatatgcccataacttttgatctagagaagttgggattT
TGAtgcaatacacttttttgctcagtttgaagagttCTTACGTAGTATAG
GTcttctttgattttgaagacccccaaaaatcatgaattttctgaccttt
caattttgtttggaaacgcaaaaaatcgaaaattatgcAAAAACTGCAGT
TTTTCAAggttggtaacattcaaattccgaatcagcaccctcaaattgac
caaaatcaatCATGAaaggacattttgaaaaaaagtgaaacgttttggtG
GCACTGCACTGGCCTACAAGTTTCCATTTCAATAGAGGGAAAGGTAATGA
TGTTTATCTCTAAGCAATTATAAATGAACGATCTTAAAGCAGTAAATTGC
TTTTATAAATGGTTTTGAAATTAGCTAACCGCGTCTTCTGAAATGATTTC
TATTAACTTAAATTAAGTTTTGGCTCCTATGTCATATGATACGTTTCGTT
TAAAAGAACATAGGCGGACAGTTTTATCATGAAATTTAAATTGATAGAGA
TATTGTTAAGTAATCTGGTCTATTGAAAACAACTTTTTAGCGTTCATTAT
CTGTAGAAAATAGATTGTAATCAAAGTCACAGCTTaggttgtctgtacac
agacccgatatctacggctaatttcaaaaattcatttccgtagacaaacg
tgagatacactctggtacagagtacagCTTAGGGATCTGGATATTACTTT
TGCTTTTTGCGTTTTGTTCCTATTTCGAATTTAATCAGGTATAGATATTC
TGTGATTGAAATATCTCAATTCTGCCCAATTTAGTAACTATTACTGCTAC
TTTAATCATATAGCTTTCGTGcttaatatttttggaaaatagtttTGGAA
GCCCTAGCGAATTTATTGTATTGTGTTAGCATCTTGAAGACATGGTTTTA
TGGGATTTGATTGTCTCAATTCTGCTATAATTTAGTAAAAAATTTACTTC
AATATACTTCACTCGTATAGCTTTTGTGCTCAATGTTTTATGtaggaata
cacgtttttttataagaacaaactatataagaacataaggcttcactggc
caaaatgttaagagcaagttaagaacattttaaggctttgtggactcaaa
accacccaatttcttaggaaaatagtcaaaattattcacaaaatggtcaa
aataagaacatgttcagaacaattttaggcttaaaactcaaaaagttcag
aacattcaaggcttcaaaaaatttggatgtttttataaaaaaaacgcgtA
GTCCTGGTAACCCTAGCAAATTTACTTGTATTTTCTCAATATCTTTACTt
tccttttctttatttttcatttatcacatttttttttcagtcgCAAGACG
ATCAAGATGATATATATGATACACCAGAAACTGAAGAAATAGGTTGGTGT
ATTTGTATTTAAAGTTCTTGACTAGCATAATTGAATGTCCAAGTTATTTT
GTGACCAGCCAAAAGTATAGTTTTttattctgtttgttttttttatacaa
GTTCGTCAAAATTAGACGATATGTGGCGACTAGGACAGAAATAATTTGAT
ATTGAACGAAAACAACTATGATGATCAGTTAATcatggaaaaattttaaa
ccccaGATCAAAATATTATTCAGGAATATTATTACAGTCTTGGTCAACTT
AATGTATACACCGAATGTCAAAGTTTGAAACAGTCCATTTTTCATACTTT
CGATTCAACTTTTACAGCTCGCCCACCACCTCTGCAACAGAAACCACAAC
GTCCAGGAGGGTACGCACGACAACCACAACACCAAACTCCAATACCACAA
CACCAATCTCCAATACCACAACACCAATCTCCAATACCACAACACCAATC
TCCAGCAGCACACCAAGATAACTTCAATATGAGCAATAAACGCACACAAA
ACATTGATAAGCATCGTCAACAATCGTTCGCTAATAGTCGAGCAATGTTC
GAACAGAGATCAACTTCACCTCCACAACCAGCTATCAATCGATCAGCTAA
ACCACCTGTACAACAACGTCGAAGTGATTCTAACAATAACCCGCCCTTCG
CTCCCAAACCCAATATTTCTAAGCGCCCAACGATTCCAACGCCAGCAGCG
CAACAAAGGGTGGTACCGCCCCAACCGATCCAACTTCAAGAACCTCAACA
TTATGAAATGGATAACCAAAGCGAAGACTCGGGCTGCCATGAGGACTTTT
ACATTGAGCCGCATCAAGCCAAAAATGCCGTCATACCCCACGAAGAAGAA
ACGTATGAGGTCACAGACGGGCCAACCTCCCCGGTCGAAATCATATCCTC
AAAACCTAAAGGCATGCCTGGTCAGCAATTCATTACACAACTAAATCGAA
TGACCTTAGAAAGATCTGCTCCCTCACTTCCCGCCTCACAGAGCAAACCA
ATGGCTGGAAGACCTCTCGTACCGACCCCAGATCAAGAAGAAACTTATGA
AATCGCACCTGAGAACCCTCGTTCACCACCATTACCCGGTAACCACCCTT
CAGCCGCAAAAAGCCCCGGCATCCCATCTCGACCTTTCGTTCAGAGCCGG
CCACCAATGCCAGTACCATCACCACCACCACAGGAAGAAGAAACCTATGA
AGTGACGCCCGATCAAGCGCCCGCTTTACCACCCTCACATCCTTCCTCGA
GAAAATCTTCAAGTACTTCGTCTATAGGTaagtaaaagagaaaaaaattt
gccaGCCTGGTGATCTTTCTGGTTACTGTGAACATCACAGTTTGGTTTTT
TCTGAAATTNAATTTGCCAACCTGGTGATCTTTCTGGTTACTGTGAACAT
CACAGTTtggttttttctgaaatttaacCTTGTGAGGACGGACAATTTTA
TCGCGTATGTCTCATCACATTTCTGATCATATAATGGAGAGCACGTATCC
TCGTGTTATGTTCTAGCAGGTTACATCTTTATATATGTGAAAAAGTAAGA
ATTTCTCTCcgactatattcactcaggagatttgggtggcagagcagcat
atgcatttcgtccttattgaGACTCATCCATCAGATATATATCTATCAGT
GAATTGAGTTTCCTTCAAAAGAACTCCTATCTTGTGATTTGATTGATTAA
GCCTTCATCAAAAATATCCTGGATAATAATTGTGGCGTGCAACTTAGTGT
CCGGTATCACAGCCTGCAGTTTCATTTCTCGTCTAATTTGGaactagcct
agttaactaagcctgtattcacaaggctaggataCACCGCTAATGGCAAT
ATAGcattttcggcgctttaaagattttttatatttacggattttatgtt
tgccttggaatactggtAATTCAGTTACAagttaccatcagatttatcct
agtgactgaatcaaaccaGTTTAGATTTCTAGGCTTATTTGGAGCTAGGT
GGTAATAATATCTAAGCAGGTCATAAACTATTCGATTCATTCTACCATCA
TCTATCTTCTAATACCTACAGGGGAATCACCGAGAACGTCCATTAAAGAC
AGATTACCAAATCCTCGAGATAACATACAAGAAGATTATGAGATGATAAC
TCATAGCCAAAGACCGCCTCCTCAACTTCCTATCTCTTCACGTCCATCTC
CACCCCAACAAAGGCGCCCACCACCCTCGTTAGAACCAAAAGGTAATGAT
CATTCTTCTCgttgaatttctttttgtacTTGCAGGTGTGTAGCAACTTA
TTCACATTCTTTACCAAGTAGGATGTTTAGGACATTCATTATATTCCAGA
TTTTTCCacgaaaaagttgattttgtattggaaatccaggagttacaaaa
aacattttacctTAGAAATCCGCtatcgtccaccccctgtatgctGTTTC
TCAACAGCATTTCttcaactcaaaatttcagaaaaaaaacttttatccaC
TGACATTggaattatttttctaaaatttaaagtGAATTTTCGTGAGGGGT
ATTGAAACTCTAGAAACTATGATCATTAATATTTTGGGGAATGAAAAATA
GGATTCTGTTGATATGTTGATTCTTTGTATACAAAGAGAAAACACAAGTT
GACATGCATGATAtcgttaatatttttttgttgctttttaagGTCAAGAA
CCTGTATTACCTCGTAAgcataaatatttatatttcattattttgtaaGC
TAAGTCGAGTCTTCATGGTCCCTTACttataaagattttgttttaaaaaa
aaactacgaACGAGGGGGGGggatttaaaactttctgatagTTGGTCTTT
TATTTTAGCTAGAAAACTTGAGCTTTTGGAAGCCGAAGATAGTGATCTGA
TGACCCCTGATGCTGTATTGTGCTCCAAAGAACTTAATATTTCCTTTTCA
GCCaaacatattttcaatatatccttcaaaatatttttcatttcagcgCG
CAACGAGAAACCGCAACGCCTTTTACCCTCGCCTTCGCAAGAAATCAACA
TTCCACCCAGAACGCCAAAAAGTAAGTCAACTCGTTATATGCACCATAGC
AATGTCTTTCACGGACCCaacatctgattggttgaaattgacgtattgac
tgaatttaccaatcagctattggttccgtgatgtaatatcagaagacatt
gcaatggtgcatgtAATGAATAGGGTGTGTTTATAATTGATTGGTATTTT
AAAGACAGGGATATCAATACGCTAACGAAGTTTTTTCTCTGTTGCCATCT
TCTGCTCGAGAGAAAGATTCAAAGAAATTGTGTTTTATCTTTGAGACTTT
CTGATCTGAAGGTACCAAACTTCACACTACTGATTGTATTATATGCTGCA
ATTAAAACCATTGTATAACAAAAACCCTCGACACAAGATTACCTACGAAC
CAGATTTTGCCAATTCTTTGGGGCGCACATGGTttatacccagctggcac
acaacgttgtttcaacgttcatctaacgttatatggacgctgtgaacgtt
agataaacgtcgaaaaaacgttatgtgccagctggatAGTAAATACTCTT
GAATGATAAGTGAGGGTAATAAATTGTTGGCAATAGATAAATTGGAACAT
CATGTCTTGTTTCTTTTTCCATACAGTGTCACAACCACAAAACTCGATGC
CTCCAAAGCTTATGGGAAGGTAAGCAAAATACTGGGTTTTTGAAACTTTG
CGTTTGTTCATGGTTCCTTTAGGTACGACATTTACATAGTTCAGGTGGAA
AGCTTTCACGTAACTTTTCGCGAGGttgaaaattcgcgaaaattattAAA
TAAGTTTTCGTAAAATAAAAGGAGTATGGAAGTCTCTAAGCCATAACGAC
GTATAATTTGCTGAGATCACCatgtttgaatgaaaaagactttgtagtat
tattttttgaaaaatacggAGTTAAAAGACAGACCATGtcgtgattttct
aaaaaagataatTTGTATGTCTTAAACGTAAAACTTTTGAGATAGATGAT
GAGTGGCCTAAATAATTATTGTCACGAAGTAGAGCCTTTGCTGAGTACTT
TTTCTGTCTCGTTTTTGATGCTCTAAGGATGGTTACTTCCTCGACTTAAT
GACTATTACTGGGACTTAAACGTCCTTAGAGATTTTGGAAATTTGGTCTA
TCAGAATGTTCCTCGTTCTTTTTTACCCTAATTGAGTCCGGCTGTCCGGT
GCGTTTTCTTTTTAATCGTTTTctttcactgacctttatatatccctgga
ccaagttactcaagcaaaatattatgatcggagtttttttgaaattggta
cccgtgGAGAGGGCGCTAGATCTAGTTTTGCTTGTACATTAATGATGTAT
CATCGTTTGTCGTAAGGCAAAGTctcaaacactacaatggcttctttgag
ggtaccaactttcaaaaacttcgatcaaaggtGGCGGATATTGCTTGGtt
cagggatatataaaggtcagtgttttCTATACAAAAAAATGTAAGGTATC
ATTTTTATGCAATGAGATCTGCAATATCCATCTGTGTCTCTTACCCCCGT
GACTTACTACCATTGCAGTCTACCTACATTCAGTCTAAGCAACAGCTGGC
TCGAAGATGTCAAGTGCGGACAAAGGAAAACCAGCCTCGATATGGGTGCC
ATAAGTCCGAAATTATTTCGTCGTATAAATGACCGTCGTTCAAGCTTATC
TGCCGATGAAATTCAAGTCAATCACTCAACTGCATGTGTCTTAGGGTAGG
ATGATATGATAAATCAACATtgactaaaaaagaaaacatgacaCACAAAG
AGACATGGCGTGACAGTTGAGTTCCGGACAAATATAATAGGCTTACTGTA
ATCCGTTTCCAGTACAGTGTGTCCCGAATAAAGTTATCAAGAAAATCTTG
GCAAAATCAATCAACTCGTTGGCATATTACCGGGTGTGTCAGAAATAAGT
TACcctttttgatttgatattgtaggcTTTTCGCCTTTTCTgacaatttt
taaaattgacattttaggtttttaaacataacttttgaacccatgaagta
aaattaaaaagtaatacaccaaattttaagttaggctttcctctgtATGA
TtcagaaacttttgaaaaacctCTCAACTACTGACaacaatattaaatta
aaaaaggATAACTAATTTCTGGAACACCCGGTAGTTTAAAAAGATATTTC
GATTCATTCCTAGAACAAACAACTAAATACAAGCCAGTTGTAAATCGTTA
ACCCTCATACTGTGATGGAGGATTTTTCATATACTAAAAACTGACCTCTT
GATTCGGGACATGCTGTAAATTGCATGTTAACATGGAAATAACTGAACAA
TCAATGTTCATCAAGGATGTGAGACTTTCAATAATGTTGAAACTGGTGAC
GGactaaaattctgaaaataaaatgcaaaaaaaaaaaatacattagTTTA
CNAGACTAaaattctgaagaaaaaaaatgcaaaaaaaaaaatacattagT
TTACTTTCGACGAGTAGATTTGCTTCTTTACTTGTTCGTGAAaataaatt
tcgcgaaattgaatgaaatggaaatttttaaagttttgttttcGACGTTT
TGTAACTCCGAACGTTTTAGTTTTGGCGAAAGCTTGACAtcttttggacc
attttcagttgatttaaGGCCTTCTAGGAAAATACATCAACGCGAAACGT
TTCAAAATATTGACTTAATAATGGAAATAAATCGAGAAATTTGTCTCGCA
GAATTGAACCTtgtgaaaattaatccaattaaagcaCACTGACAAAGAAC
AGTTTAAACAATGAAATATTGATGATTTTGACGAACATTACCTTAACATA
ACCAATGACATACGAAATATCGActttacaaaatagaaatactTAACCAC
TCATACGCGTACAAAGTTATTCTAAATGAGACCTTCAATCTGTTACTTTT
TTATGGAATTGTTCATTTAATATTTTAGCAAATTAATTATCAGACATTTT
CTAGATACAGTTTTCCTTCCTTTTTGAAACAGGCCAAGCCACCCAGCTTT
CCAACAAGCAACGATGAGTTTAGATCGAAGCAAGGATACTTGTCCTCAAC
CTACCATAGAACGTATACCATCGTACAAAAAGCAAACACAATCTGCAAAT
GCACCAACGCCTATCAATAGACAAACGCCTGCTCCCGCCCATCCGTTATC
TGGTTTCACCTGGTTCCAACCGGAGCTTGATCGTAGAGCGTGCgaaatta
aattgaaccaaaacagaAGGGTGAGTACGTCTACGTTTAGGATACTGTTC
GCCCCTTGAGGTACTCTGCACCAGaatgtatctcacgtttatcgcttcgt
agtacactctgtgcgcattgtctgtttgataaaaaaattcccgtatggag
acctctgcgatgaagtatgatttatataaatagcaacacttctctcgtct
tctccccctctctcaccaacactccatcgcagcggtcggtttgaaaaatc
tcaaatgagaaaaggcaatgacaacagaccctctacggcaatgaattttg
aaattagtcgtagatactgggtctgtgtacaggcAAACTTTGAGGGAGTC
AAAGGTTATTTCTCTCTGCTACTCGAGATGTTCAATGGCTCGAACGATCA
CTGTCTACTTCTTGGTGTTTAAAGTTATTGTGACTTAAAAGTATTCCTAA
AAGAAGCAAGGTGATTTTCCCCTGAATAAACCTTGACTAAAATTGGAAAT
TATGTTCATTTGAAACTCATATGAATCCTTTTGTGTTTGTTATTTCGTAG
TATTTTCAAGTCAATCTCGTTGAATTGCCTGAAGGCTGCAAtacaacgct
ttttttataataatacactttataagaatgtccatgataaaaatggccaa
aaaattaaggataatgctaagaatatcaccatcatggaattttgctactc
agctaagaatgacatttttagagcattttcaattataaattgccaattac
ccccaagtaaggctcactcctttcacaaaaatgccattttatgcttgaga
cgtatgtactaaatgtcaaatctagtctgaattaggattctaacctaaga
ataatgtaagaatattttaggatgatttttttaagaaaatccatgataaa
atggatttacaccattcttatgaaAATAAGCGTGTATTTGAAGCACACAT
TTCAAGGTTTTCTAAAatcttttctttactttttaggATGGTGACTTTGT
GATACGAAACTCATCCAAAGCCGGTGTCCCATTTTCTATATCAATCTTTC
ACGATAATGTTGTCCGCAATTTACAGTAAGTGTCCGAAAAAGTTTAACAA
TCGCTATTAAATGCTTTTCATTGATGTTAGGTGTATAATATTTTCTCAAT
GCAGAATTTCCTaatctaccttatcggggaaaaaaatgtcggagttttat
ttaaaaaagatcttgtaaatcgacgtttaaagcacttatttcggttaata
aagatgtaaaaaatatagattttaattttggttggggtttaaagaattgg
gtaaaagttttggtcgggtgataaaatatcggggaaaaaattcgtagggg
gaaaatttcgtcaccccttcaaaattttcgtcacttccCCCCGACATTTT
TCCCAGATAAGGTATAGCAACGTAGGCAGAAATTTTCAAgatcaaaaatt
gaagaaaaagatttcgcgatttctttaaaaacaataatTCTAAAGAGCAA
AACtttatggaaaaaaatataaaaggtAGAAATGTGTCCGTCCATATATT
CTGTGAATTTTCTTACTTGATAGAAACTAGCCAAAATAggccaaaattac
aaaattatctGCCTAAAAAGTATTGAACACAAACCGAAGATTAATTCTTT
TCCATTTATAGGCTGCTTCAAAAAGACGGTAAAATGTACTTGGGAAGTTC
TACTGAGGTAGGTCATTCATTAAACACTTATACATACTCGAAGTGACCGG
GAAGGGACTCGGTGTCATCCTCCAAATAATGTTATATGCTATGTCATGCA
TGGTAACACGCTCCATATTGAGTAATATTAGCCATAAACTCtctggtacc
taatagccgggggggggaggaggttggaaaaaatctcaaaacttaataag
cggggcgttagaataaaaatgtcctaggtggaaaattttcgaaaaattaa
ttagtgggggggcggctattaggtacccgagagtaagccTTAATACAATC
ACAGTAGAATTTTCTTCTGCCTAAAACAGATTTTCACCTCTTAAAAACCA
TTTATTTATCAGTCATATTTTTGATCAGCTAAGATGGATTAATGAGTTTC
TCAATAACTTTTTATTCTGCTATCTTTCAGGGGTTTGAAGGAGTACCTGA
ATTGGTATCGTATCATCAGAATAACGAAATCATACTCAACACTGGTGGTA
AAGTGAAACTACTCAGGATTTGATGGCAATAGAAAATTTAGTACGCATTT
ATAAGgaagaaaaacgaaaatatttttgggtaaTGTCAGAATGGGTGAAT
CCAACCAAAGCTTTGTTGGAGCTTTTAAATTCAAGAATTCGGAAGAGAAT
TCGCCTTGTGGACTTTAAAGAGCTATTTATAAGTTCATTCAATTGCAACC
GAAAATATGGGATCAACATTGATCACCATCATTGTTTTGGATCATTGCTT
TTTTATTAACGGAGCTTCAAGATTAATCTCCCGCCGCCTTACTAATAGAT
CTTATTGGAGTTCGGGGGTattaaaatagaaatctcttaggaattcctcg
ggggaattctattgtaatactcccgaaacaattccacaatgcatcgcttt
tttagaaaaatcaaaaacttcgaTAAGATCTATTTACATGGTCTCCGAAA
AAGTCAGAACACTTACAGATatagaagaaaaaaagtattttttatgGGAT
ATCTATGAAAGACACTTCGGAAAGGCCGATTTAAACAATCACAAAGACAA
ACTTGGTGATAGAAAATGTTTCATATTGAACCAGAGTTGTTTTTGGTGAT
ACTTAGTTAATTTCTTGTTGCTTTTTagtttagatttttttgttatgtaa
atacgaatttgattatttttctaaataattaTTGATAGATGAATAGGTTT
TCTAATGGCggataattctttttttaaatatttgtaATTATTGGTAActt
aaatttacagaaaaatatttttttcaaatgtttataTTAAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000718XLOC_000718Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001323-exon-sc0000010-1491911889:139249..139290TCONS_00001323-exon-sc0000010-1491911889:139249..139290Clytia hemisphaericaexon
TCONS_00001323-exon-sc0000010-1510915933:139249..139290TCONS_00001323-exon-sc0000010-1510915933:139249..139290Clytia hemisphaericaexon
TCONS_00001323-exon-sc0000010-1575043694:139249..139290TCONS_00001323-exon-sc0000010-1575043694:139249..139290Clytia hemisphaericaexon
TCONS_00001323-exon-sc0000010-1491911889:140728..140843TCONS_00001323-exon-sc0000010-1491911889:140728..140843Clytia hemisphaericaexon
TCONS_00001323-exon-sc0000010-1510915933:140728..140843TCONS_00001323-exon-sc0000010-1510915933:140728..140843Clytia hemisphaericaexon
TCONS_00001323-exon-sc0000010-1575043694:140728..140843TCONS_00001323-exon-sc0000010-1575043694:140728..140843Clytia hemisphaericaexon
TCONS_00001323-exon-sc0000010-1491911889:145789..145840TCONS_00001323-exon-sc0000010-1491911889:145789..145840Clytia hemisphaericaexon
TCONS_00001323-exon-sc0000010-1510915933:145789..145840TCONS_00001323-exon-sc0000010-1510915933:145789..145840Clytia hemisphaericaexon
TCONS_00001323-exon-sc0000010-1575043694:145789..145840TCONS_00001323-exon-sc0000010-1575043694:145789..145840Clytia hemisphaericaexon
TCONS_00001323-exon-sc0000010-1491911889:146166..147125TCONS_00001323-exon-sc0000010-1491911889:146166..147125Clytia hemisphaericaexon
TCONS_00001323-exon-sc0000010-1510915933:146166..147125TCONS_00001323-exon-sc0000010-1510915933:146166..147125Clytia hemisphaericaexon
TCONS_00001323-exon-sc0000010-1575043694:146166..147125TCONS_00001323-exon-sc0000010-1575043694:146166..147125Clytia hemisphaericaexon
TCONS_00001323-exon-sc0000010-1491911889:147920..148090TCONS_00001323-exon-sc0000010-1491911889:147920..148090Clytia hemisphaericaexon
TCONS_00001323-exon-sc0000010-1510915933:147920..148090TCONS_00001323-exon-sc0000010-1510915933:147920..148090Clytia hemisphaericaexon
TCONS_00001323-exon-sc0000010-1575043694:147920..148090TCONS_00001323-exon-sc0000010-1575043694:147920..148090Clytia hemisphaericaexon
TCONS_00001323-exon-sc0000010-1491911889:148845..148919TCONS_00001323-exon-sc0000010-1491911889:148845..148919Clytia hemisphaericaexon
TCONS_00001323-exon-sc0000010-1510915933:148845..148919TCONS_00001323-exon-sc0000010-1510915933:148845..148919Clytia hemisphaericaexon
TCONS_00001323-exon-sc0000010-1575043694:148845..148919TCONS_00001323-exon-sc0000010-1575043694:148845..148919Clytia hemisphaericaexon
TCONS_00001323-exon-sc0000010-1491911889:149525..149567TCONS_00001323-exon-sc0000010-1491911889:149525..149567Clytia hemisphaericaexon
TCONS_00001323-exon-sc0000010-1510915933:149525..149567TCONS_00001323-exon-sc0000010-1510915933:149525..149567Clytia hemisphaericaexon
TCONS_00001323-exon-sc0000010-1575043694:149525..149567TCONS_00001323-exon-sc0000010-1575043694:149525..149567Clytia hemisphaericaexon
TCONS_00001323-exon-sc0000010-1491911889:151931..152168TCONS_00001323-exon-sc0000010-1491911889:151931..152168Clytia hemisphaericaexon
TCONS_00001323-exon-sc0000010-1510915933:151931..152168TCONS_00001323-exon-sc0000010-1510915933:151931..152168Clytia hemisphaericaexon
TCONS_00001323-exon-sc0000010-1575043694:151931..152168TCONS_00001323-exon-sc0000010-1575043694:151931..152168Clytia hemisphaericaexon
TCONS_00001323-exon-sc0000010-1491911889:153135..153223TCONS_00001323-exon-sc0000010-1491911889:153135..153223Clytia hemisphaericaexon
TCONS_00001323-exon-sc0000010-1510915933:153135..153223TCONS_00001323-exon-sc0000010-1510915933:153135..153223Clytia hemisphaericaexon
TCONS_00001323-exon-sc0000010-1575043694:153135..153223TCONS_00001323-exon-sc0000010-1575043694:153135..153223Clytia hemisphaericaexon
TCONS_00001323-exon-sc0000010-1491911889:153810..153855TCONS_00001323-exon-sc0000010-1491911889:153810..153855Clytia hemisphaericaexon
TCONS_00001323-exon-sc0000010-1510915933:153810..153855TCONS_00001323-exon-sc0000010-1510915933:153810..153855Clytia hemisphaericaexon
TCONS_00001323-exon-sc0000010-1575043694:153810..153855TCONS_00001323-exon-sc0000010-1575043694:153810..153855Clytia hemisphaericaexon
TCONS_00001323-exon-sc0000010-1491911889:154279..155140TCONS_00001323-exon-sc0000010-1491911889:154279..155140Clytia hemisphaericaexon
TCONS_00001323-exon-sc0000010-1510915933:154279..155140TCONS_00001323-exon-sc0000010-1510915933:154279..155140Clytia hemisphaericaexon
TCONS_00001323-exon-sc0000010-1575043694:154279..155140TCONS_00001323-exon-sc0000010-1575043694:154279..155140Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000010supercontigsc0000010:139249..155140 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.000914267	0.00248777	0.0881851	0.00999307	0.728977	5.35594e-06	3.52805e-07	0.000968299	0.00365283	0.000451999	0.000426753	4.82438e-10	2.43461e-10	0	5.34936e-07	2.76162e-06	0.00117716	8.96333e-08	0	8.1165e-06	0.61852	0.00209034	0.000114871	0.0588615	0	0	2.12235e-07	1.68137e-05	1.90693e-07	0.000100391
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00001323 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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