TCONS_00001322 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001322
Unique NameTCONS_00001322
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2717

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001322 ID=TCONS_00001322|Name=TCONS_00001322|organism=Clytia hemisphaerica|type=transcript|length=2717bp
TGACGACGAAGATTACGAAAATGCTGATGCAGGATTTTGTGAAGGCTCGC
CACCTCTTCAGCCACCGCTTCAGCCACCACCAAGAACATACAGTCAAAAT
GTGAACACTTTCAACAATAGTAATGATAGCATAGATGAATCCAAATCATA
CAACTATCTGtcgCAAGACGATCAAGATGATATATATGATACACCAGAAA
CTGAAGAAATAGCTCGCCCACCACCTCTGCAACAGAAACCACAACGTCCA
GGAGGGTACGCACGACAACCACAACACCAAACTCCAATACCACAACACCA
ATCTCCAATACCACAACACCAATCTCCAATACCACAACACCAATCTCCAG
CAGCACACCAAGATAACTTCAATATGAGCAATAAACGCACACAAAACATT
GATAAGCATCGTCAACAATCGTTCGCTAATAGTCGAGCAATGTTCGAACA
GAGATCAACTTCACCTCCACAACCAGCTATCAATCGATCAGCTAAACCAC
CTGTACAACAACGTCGAAGTGATTCTAACAATAACCCGCCCTTCGCTCCC
AAACCCAATATTTCTAAGCGCCCAACGATTCCAACGCCAGCAGCGCAACA
AAGGGTGGTACCGCCCCAACCGATCCAACTTCAAGAACCTCAACATTATG
AAATGGATAACCAAAGCGAAGACTCGGGCTGCCATGAGGACTTTTACATT
GAGCCGCATCAAGCCAAAAATGCCGTCATACCCCACGAAGAAGAAACGTA
TGAGGTCACAGACGGGCCAACCTCCCCGGTCGAAATCATATCCTCAAAAC
CTAAAGGCATGCCTGGTCAGCAATTCATTACACAACTAAATCGAATGACC
TTAGAAAGATCTGCTCCCTCACTTCCCGCCTCACAGAGCAAACCAATGGC
TGGAAGACCTCTCGTACCGACCCCAGATCAAGAAGAAACTTATGAAATCG
CACCTGAGAACCCTCGTTCACCACCATTACCCGGTAACCACCCTTCAGCC
GCAAAAAGCCCCGGCATCCCATCTCGACCTTTCGTTCAGAGCCGGCCACC
AATGCCAGTACCATCACCACCACCACAGGAAGAAGAAACCTATGAAGTGA
CGCCCGATCAAGCGCCCGCTTTACCACCCTCACATCCTTCCTCGAGAAAA
TCTTCAAGTACTTCGTCTATAGGGGAATCACCGAGAACGTCCATTAAAGA
CAGATTACCAAATCCTCGAGATAACATACAAGAAGATTATGAGATGATAA
CTCATAGCCAAAGACCGCCTCCTCAACTTCCTATCTCTTCACGTCCATCT
CCACCCCAACAAAGGCGCCCACCACCCTCGTTAGAACCAAAAGGTCAAGA
ACCTGTATTACCTCcgCGCAACGAGAAACCGCAACGCCTTTTACCCTCGC
CTTCGCAAGAAATCAACATTCCACCCAGAACGCCAAAAATGTCACAACCA
CAAAACTCGATGCCTCCAAAGCTTATGGGAAGGCCAAGCCACCCAGCTTT
CCAACAAGCAACGATGAGTTTAGATCGAAGCAAGGATACTTGTCCTCAAC
CTACCATAGAACGTATACCATCGTACAAAAAGCAAACACAATCTGCAAAT
GCACCAACGCCTATCAATAGACAAACGCCTGCTCCCGCCCATCCGTTATC
TGGTTTCACCTGGTTCCAACCGGAGCTTGATCGTAGAGCGTGCgaaatta
aattgaaccaaaacagaAGGgATGGTGACTTTGTGATACGAAACTCATCC
AAAGCCGGTGTCCCATTTTCTATATCAATCTTTCACGATAATGTTGTCCG
CAATTTACAGCTGCTTCAAAAAGACGGTAAAATGTACTTGGGAAGTTCTA
CTGAGGGGTTTGAAGGAGTACCTGAATTGGTATCGTATCATCAGAATAAC
GAAATCATACTCAACACTGGTGGTAAAGTGAAACTACTCAGGATTTGATG
GCAATAGAAAATTTAGTACGCATTTATAAGgaagaaaaacgaaaatattt
ttgggtaaTGTCAGAATGGGTGAATCCAACCAAAGCTTTGTTGGAGCTTT
TAAATTCAAGAATTCGGAAGAGAATTCGCCTTGTGGACTTTAAAGAGCTA
TTTATAAGTTCATTCAATTGCAACCGAAAATATGGGATCAACATTGATCA
CCATCATTGTTTTGGATCATTGCTTTTTTATTAACGGAGCTTCAAGATTA
ATCTCCCGCCGCCTTACTAATAGATCTTATTGGAGTTCGGGGGTattaaa
atagaaatctcttaggaattcctcgggggaattctattgtaatactcccg
aaacaattccacaatgcatcgcttttttagaaaaatcaaaaacttcgaTA
AGATCTATTTACATGGTCTCCGAAAAAGTCAGAACACTTACAGATataga
agaaaaaaagtattttttatgGGATATCTATGAAAGACACTTCGGAAAGG
CCGATTTAAACAATCACAAAGACAAACTTGGTGATAGAAAATGTTTCATA
TTGAACCAGAGTTGTTTTTGGTGATACTTAGTTAATTTCTTGTTGCTTTT
Tagtttagatttttttgttatgtaaatacgaatttgattatttttctaaa
taattaTTGATAGATGAATAGGTTTTCTAATGGCggataattcttttttt
aaatatttgtaATTATTGGTAActtaaatttacagaaaaatatttttttc
aaatgtttataTTAAAA
Run BLAST on NCBI

transcript from alignment at sc0000010:139247..155140+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001322 ID=TCONS_00001322|Name=TCONS_00001322|organism=Clytia hemisphaerica|type=transcript|length=15894bp|location=Sequence derived from alignment at sc0000010:139247..155140+ (Clytia hemisphaerica)
TGACGACGAAGATTACGAAAATGCTGATGCAGGATTTTGTGAAGGTAGTA ACAATCGAGTATTATATATGTCAAAGTATCGTACTCTAGAGATTCACTAT TTCACGGCTCGACTATTTATTCCTTAAAGATTAGAATGAATTGTACGGAA CATTAGAAGGAGCGGGGATCCGAATCGCGAATCCCTGGTTcgagacgctg acgcctttgaccacttagCCATCACTCCATAATTGCTCTATTTTGACTGA CCATTTGATACAATGGTTTTTCGAAATGAACTTTCAATTGTAGTAACTGT ATTTCTCTCAGCTTCTTGTAAATGTTTACGAATTTTTAGAAAGAAGAGAG GAACGATAAATATGATAGCAATTAGAAACTTTGGTAATCATATTTATGGG ACTGTTGCTGTAAGGTTAATCTTTTTTGTCAAGTTGTGTACAGAAGATAA CCTGTGTTAAATTTACTGTGTTAATTTTGTTGCGCaatctaaaatttttc tctTGATTAATTTTTAGGCTCGCCACCTCTTCAGCCACCGCTTCAGCCAC CACCAAGAACATACAGTCAAAATGTGAACACTTTCAACAATAGTAATGAT AGCATAGATGAATCCAAATCATACAACTATCTGGTAGGTTATTTTGTCAA CAGTTTTTGTACGACTTTTTACACGTGAACTTATATTTTGTATGCCCGAA CATAATTTTGTTCGCTTACTATTTCTTTGGTGATAATTGCATTTAGGTAT TGGGTAACCCTTAAAACCCTTCCTCTGCTTATACTAAAAAGTCCTgttca atgtgaaaaagatgTTGGACTTTGACTTGGTTTTCTTGAGTGTCTACATT GATCGAGCCTAGTGTATAACTTCATAGAGCCCCCCCCCCNTGAGGATATT TACGGAAATTCGTAACTTGAATACGTGACCGACCCTCCAtattttccctc ttttttttaCAGTTTGACGACGAAGATTACGAAAATGCTGATGCAGGATT TTGTGAAGGTAGTAACAATCGAGTATTATATATGTCAAAGTATCGTACTC TAGAGATTCACTATTTCACGGCTCGACTATTTATTCCTTAAAGATTAGAA TGAATTGTACGGAACATTAGAAGGAGCGGGGATCCGAATCGCGAATCCCT GGTTcgagacgctgacgcctttgaccacttagCCATCACTCCATAATTGC TCTATTTTGACTGACCATTTGATACAATGGTTTTTCGAAATGAACTTTCA ATTGTAGTAACTGTATTTCTCTCAGCTTCTTGTAAATGTTTACGAATTTT TAGAAAGAAGAGAGGAACGATAAATATGATAGCAATTAGAAACTTTGGTA ATCATATTTATGGGACTGTTGCTGTAAGGTTAATCTTTTTTGTCAAGTTG TGTACAGAAGATAACCTGTGTTAAATTTACTGTGTTAATTTTGTTGCGCa atctaaaatttttctctTGATTAATTTTTAGGCTCGCCACCTCTTCAGCC ACCGCTTCAGCCACCACCAAGAACATACAGTCAAAATGTGAACACTTTCA ACAATAGTAATGATAGCATAGATGAATCCAAATCATACAACTATCTGGTA GGTTATTTTGTCAACAGTTTTTGTACGACTTTTTACACGTGAACTTATAT TTTGTATGCCCGAACATAATTTTGTTCGCTTACTATTTCTTTGGTGATAA TTGCATTTAGGTATTGGGTAACCCTTAAAACCCTTCCTCTGCTTATACTA AAAAGTCCTgttcaatgtgaaaaagatgTTGGACTTTGACTTGGTTTTCT TGAGTGTCTACATTGATCGAGCCTAGTGTATAACTTCatagagccccccc ccccagcggttttcatgatggcgtgattggtGTGTGATCAGAGGAACCAA CGTGATCATTatagaaaggaaatttaactTGTGATTGTgtgatttgaaag gtgactgggGGCCTCTTCATACAGTTCAACTCCTGATTCAGACAAACATA GATTTTATATCATGATATTGCAATGCTCCTAAGTAATTTAAAATggtttt aaaagtgttttttgtTCACACGGTATCGGTTTGCAGCACCTCATTTTACG AAGTTCtgatatttgttttttataagtaaTCAAATGTAACTTATCATTCA GGACTAGGATTACCCCCAGTACCAAACAAGATAGGATCGGCTTACATAGT TTTAACACGGGGAATTTCGGCTGTGTGAAGCCATCAAAGTTCCATTTATA AAGTGCGAGATCCAGTTGAGAAAATctacatattggaaaaggtcttTTCG GGGAAAATGTTTTGAAGTTTTGGGGGTTTCTTTTCCTTGTAAGACTGATA TGATAGTGACTAAAATTCAACGAATTTAACCCATGGGAAAATGAAAGTAA CAAACATTTTTGGAGAACTCAAAGTCTGTTAAAAAATTAGTATGCTCCAa tatgatattttgaattttttcggTCAAGTAAAAAAGGTCAGGGGGATTAT TTTGGGGAATTACTTAAAAAATGCCATGCAGTATTTGAAAGAGAAATTGC TTTATATGATATACTTTCTTAAACAAATACCTTTGCATCAATTATCGTGT TTAGATTAAAAAATTTGTGTGTACAGTACGTCaacattttgagaaattca aaGTACACGATTtattagtctacacaatagacagatacaggcttttaggc cttactcttgttCTATAGGCACTgatataggcggccactagtgaacccca ccgggaattgcttattaataggtttaaacataatagacaacattcacaaa agatgtttatcaatagagattttaaataaaagaatgtttaaaacacagNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACGATTTATTAACAGGA CTAAACACGTCtctttgtttttaatgtttatcTTGTTGTCGAAATCGGtg aatcatttttctttttgtatacACAGGGCATCCCCTCTCATTAATTTTCT CGTCTTTTTTGATCGAACTTGTATCATATAAGTGTTTATACGCTTGATGA TTGAAATctatgtttaaagattttttactgctgaaagtttaaaaaggaag tTTTTTAGGGAAGGctgtttaaggctttttgaggattttttaaaaaggtt tttggGGATTTTGGAAACAAGCCTTAGAATTATTCAAAAATGTATGAAGC CTTCCCTATGGTAAGTGATATTTTGCTTTGAATTCTTGAAATTATAATCT TAAATCTCTTTTTAGCAGGGGGGGTGTCGGTACTAAAACccaagacatat atgagtactacaaggttttttgacgatttttgacataccctcacctaatt tttgaaaaaggaattttagtacacatgtactgaaatttatttttacattt tagcaTAGTGACCACCTAAATAAGGCTTATTTTGGAATTCGGTTCGAAGA ATGTGGGTCTttggactttcaacaaaatgccAACTCTGGTTATTTAAGCT GTCAATGAACCTGATATATCTCTATCTATTCTAGATAAAGACTCAGAAAC AGTCAAGACACTTTTGCCCTGCTCTACTTTAGTTATTGCAAAGATTGATG GGTTATTTTTCACCTCTAATTTACAGAggaacctttttcctcagttgaga taaaaatttcctattgaaatattaatggggatacaaattctattgttcca aggttaaaaacccagtggggatatgattttggagtgcaatttttacacat ggaattttgagtggggatgaaatcaaagtcaatttcccagtagggctgaa attcaagggtattctaccaccggggacaaaatttttgcttaatttgtgac acagggacgtatttaaatcttatatagagagtttttattttttcattttg cctaaaatgctcAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNtagttaaatttcctaaaatttggtgatttttagtactca tgtattaaaatttttcttaaatttcttgaagacccccacctaatttggga ttttagtacacatggtactaaaatgcttttaggctttttttgtaatacca ccacgtcactaaaagtcatgatgtctgaaattttagtaccgacccccccc cctctttttaGCTAAATTTATAGTTTTTCACACAAAGACtataagctcta gtttagacggccgactttctgccctgtctattctaattgttagagtaggc agaagtTGGGCAAAAAGTTGGCAGctaaagacattgcattgacgtcaaaa gagggcgatgcattgactttagacggcccactttatgcccactttgattc acaattagaatagacagggcaaaaagtgggctgtctaaactagagctaag ctCGTCTGAAAGGGTAAAAGAAAATTGTCAATACTTTGTATGTATTGTCA GTACCTGGTAACTTTCAGTTTCGGAAATTTTCAATGTCATTATTAAGTAT TCTACTCATTTTATCTTGAATTTGGTCACAACTTTCATTTAGTATTGGCG TCATAAATGAGGTATTATTTCCTTGAAAGTTTGTGAGAGATCTATGGGCC TGTGTCAAAAAATGTTGCCTTTGAAGTAGGTTTAAAGCATTTTGTACATT TACGACGAATCTTTGTTAAAAAACAATAGGccgcaaaattaaacaccttt tttgacaacaaataatatgcccataacttttgatctagagaagttgggat tTTGAtgcaatacacttttttgctcagtttgaagagttCTTACGTAGTAT AGGTcttctttgattttgaagacccccaaaaatcatgaattttctgacct ttcaattttgtttggaaacgcaaaaaatcgaaaattatgcAAAAACTGCA GTTTTTCAAggttggtaacattcaaattccgaatcagcaccctcaaattg accaaaatcaatCATGAaaggacattttgaaaaaaagtgaaacgttttgg tGGCACTGCACTGGCCTACAAGTTTCCATTTCAATAGAGGGAAAGGTAAT GATGTTTATCTCTAAGCAATTATAAATGAACGATCTTAAAGCAGTAAATT GCTTTTATAAATGGTTTTGAAATTAGCTAACCGCGTCTTCTGAAATGATT TCTATTAACTTAAATTAAGTTTTGGCTCCTATGTCATATGATACGTTTCG TTTAAAAGAACATAGGCGGACAGTTTTATCATGAAATTTAAATTGATAGA GATATTGTTAAGTAATCTGGTCTATTGAAAACAACTTTTTAGCGTTCATT ATCTGTAGAAAATAGATTGTAATCAAAGTCACAGCTTaggttgtctgtac acagacccgatatctacggctaatttcaaaaattcatttccgtagacaaa cgtgagatacactctggtacagagtacagCTTAGGGATCTGGATATTACT TTTGCTTTTTGCGTTTTGTTCCTATTTCGAATTTAATCAGGTATAGATAT TCTGTGATTGAAATATCTCAATTCTGCCCAATTTAGTAACTATTACTGCT ACTTTAATCATATAGCTTTCGTGcttaatatttttggaaaatagtttTGG AAGCCCTAGCGAATTTATTGTATTGTGTTAGCATCTTGAAGACATGGTTT TATGGGATTTGATTGTCTCAATTCTGCTATAATTTAGTAAAAAATTTACT TCAATATACTTCACTCGTATAGCTTTTGTGCTCAATGTTTTATGtaggaa tacacgtttttttataagaacaaactatataagaacataaggcttcactg gccaaaatgttaagagcaagttaagaacattttaaggctttgtggactca aaaccacccaatttcttaggaaaatagtcaaaattattcacaaaatggtc aaaataagaacatgttcagaacaattttaggcttaaaactcaaaaagttc agaacattcaaggcttcaaaaaatttggatgtttttataaaaaaaacgcg tAGTCCTGGTAACCCTAGCAAATTTACTTGTATTTTCTCAATATCTTTAC TttccttttctttatttttcatttatcacatttttttttcagtcgCAAGA CGATCAAGATGATATATATGATACACCAGAAACTGAAGAAATAGGTTGGT GTATTTGTATTTAAAGTTCTTGACTAGCATAATTGAATGTCCAAGTTATT TTGTGACCAGCCAAAAGTATAGTTTTttattctgtttgttttttttatac aaGTTCGTCAAAATTAGACGATATGTGGCGACTAGGACAGAAATAATTTG ATATTGAACGAAAACAACTATGATGATCAGTTAATcatggaaaaatttta aaccccaGATCAAAATATTATTCAGGAATATTATTACAGTCTTGGTCAAC TTAATGTATACACCGAATGTCAAAGTTTGAAACAGTCCATTTTTCATACT TTCGATTCAACTTTTACAGCTCGCCCACCACCTCTGCAACAGAAACCACA ACGTCCAGGAGGGTACGCACGACAACCACAACACCAAACTCCAATACCAC AACACCAATCTCCAATACCACAACACCAATCTCCAATACCACAACACCAA TCTCCAGCAGCACACCAAGATAACTTCAATATGAGCAATAAACGCACACA AAACATTGATAAGCATCGTCAACAATCGTTCGCTAATAGTCGAGCAATGT TCGAACAGAGATCAACTTCACCTCCACAACCAGCTATCAATCGATCAGCT AAACCACCTGTACAACAACGTCGAAGTGATTCTAACAATAACCCGCCCTT CGCTCCCAAACCCAATATTTCTAAGCGCCCAACGATTCCAACGCCAGCAG CGCAACAAAGGGTGGTACCGCCCCAACCGATCCAACTTCAAGAACCTCAA CATTATGAAATGGATAACCAAAGCGAAGACTCGGGCTGCCATGAGGACTT TTACATTGAGCCGCATCAAGCCAAAAATGCCGTCATACCCCACGAAGAAG AAACGTATGAGGTCACAGACGGGCCAACCTCCCCGGTCGAAATCATATCC TCAAAACCTAAAGGCATGCCTGGTCAGCAATTCATTACACAACTAAATCG AATGACCTTAGAAAGATCTGCTCCCTCACTTCCCGCCTCACAGAGCAAAC CAATGGCTGGAAGACCTCTCGTACCGACCCCAGATCAAGAAGAAACTTAT GAAATCGCACCTGAGAACCCTCGTTCACCACCATTACCCGGTAACCACCC TTCAGCCGCAAAAAGCCCCGGCATCCCATCTCGACCTTTCGTTCAGAGCC GGCCACCAATGCCAGTACCATCACCACCACCACAGGAAGAAGAAACCTAT GAAGTGACGCCCGATCAAGCGCCCGCTTTACCACCCTCACATCCTTCCTC GAGAAAATCTTCAAGTACTTCGTCTATAGGTaagtaaaagagaaaaaaat ttgccaGCCTGGTGATCTTTCTGGTTACTGTGAACATCACAGTTTGGTTT TTTCTGAAATTNAATTTGCCAACCTGGTGATCTTTCTGGTTACTGTGAAC ATCACAGTTtggttttttctgaaatttaacCTTGTGAGGACGGACAATTT TATCGCGTATGTCTCATCACATTTCTGATCATATAATGGAGAGCACGTAT CCTCGTGTTATGTTCTAGCAGGTTACATCTTTATATATGTGAAAAAGTAA GAATTTCTCTCcgactatattcactcaggagatttgggtggcagagcagc atatgcatttcgtccttattgaGACTCATCCATCAGATATATATCTATCA GTGAATTGAGTTTCCTTCAAAAGAACTCCTATCTTGTGATTTGATTGATT AAGCCTTCATCAAAAATATCCTGGATAATAATTGTGGCGTGCAACTTAGT GTCCGGTATCACAGCCTGCAGTTTCATTTCTCGTCTAATTTGGaactagc ctagttaactaagcctgtattcacaaggctaggataCACCGCTAATGGCA ATATAGcattttcggcgctttaaagattttttatatttacggattttatg tttgccttggaatactggtAATTCAGTTACAagttaccatcagatttatc ctagtgactgaatcaaaccaGTTTAGATTTCTAGGCTTATTTGGAGCTAG GTGGTAATAATATCTAAGCAGGTCATAAACTATTCGATTCATTCTACCAT CATCTATCTTCTAATACCTACAGGGGAATCACCGAGAACGTCCATTAAAG ACAGATTACCAAATCCTCGAGATAACATACAAGAAGATTATGAGATGATA ACTCATAGCCAAAGACCGCCTCCTCAACTTCCTATCTCTTCACGTCCATC TCCACCCCAACAAAGGCGCCCACCACCCTCGTTAGAACCAAAAGGTAATG ATCATTCTTCTCgttgaatttctttttgtacTTGCAGGTGTGTAGCAACT TATTCACATTCTTTACCAAGTAGGATGTTTAGGACATTCATTATATTCCA GATTTTTCCacgaaaaagttgattttgtattggaaatccaggagttacaa aaaacattttacctTAGAAATCCGCtatcgtccaccccctgtatgctGTT TCTCAACAGCATTTCttcaactcaaaatttcagaaaaaaaacttttatcc aCTGACATTggaattatttttctaaaatttaaagtGAATTTTCGTGAGGG GTATTGAAACTCTAGAAACTATGATCATTAATATTTTGGGGAATGAAAAA TAGGATTCTGTTGATATGTTGATTCTTTGTATACAAAGAGAAAACACAAG TTGACATGCATGATAtcgttaatatttttttgttgctttttaagGTCAAG AACCTGTATTACCTCGTAAgcataaatatttatatttcattattttgtaa GCTAAGTCGAGTCTTCATGGTCCCTTACttataaagattttgttttaaaa aaaaactacgaACGAGGGGGGGggatttaaaactttctgatagTTGGTCT TTTATTTTAGCTAGAAAACTTGAGCTTTTGGAAGCCGAAGATAGTGATCT GATGACCCCTGATGCTGTATTGTGCTCCAAAGAACTTAATATTTCCTTTT CAGCCaaacatattttcaatatatccttcaaaatatttttcatttcagcg CGCAACGAGAAACCGCAACGCCTTTTACCCTCGCCTTCGCAAGAAATCAA CATTCCACCCAGAACGCCAAAAAGTAAGTCAACTCGTTATATGCACCATA GCAATGTCTTTCACGGACCCaacatctgattggttgaaattgacgtattg actgaatttaccaatcagctattggttccgtgatgtaatatcagaagaca ttgcaatggtgcatgtAATGAATAGGGTGTGTTTATAATTGATTGGTATT TTAAAGACAGGGATATCAATACGCTAACGAAGTTTTTTCTCTGTTGCCAT CTTCTGCTCGAGAGAAAGATTCAAAGAAATTGTGTTTTATCTTTGAGACT TTCTGATCTGAAGGTACCAAACTTCACACTACTGATTGTATTATATGCTG CAATTAAAACCATTGTATAACAAAAACCCTCGACACAAGATTACCTACGA ACCAGATTTTGCCAATTCTTTGGGGCGCACATGGTttatacccagctggc acacaacgttgtttcaacgttcatctaacgttatatggacgctgtgaacg ttagataaacgtcgaaaaaacgttatgtgccagctggatAGTAAATACTC TTGAATGATAAGTGAGGGTAATAAATTGTTGGCAATAGATAAATTGGAAC ATCATGTCTTGTTTCTTTTTCCATACAGTGTCACAACCACAAAACTCGAT GCCTCCAAAGCTTATGGGAAGGTAAGCAAAATACTGGGTTTTTGAAACTT TGCGTTTGTTCATGGTTCCTTTAGGTACGACATTTACATAGTTCAGGTGG AAAGCTTTCACGTAACTTTTCGCGAGGttgaaaattcgcgaaaattattA AATAAGTTTTCGTAAAATAAAAGGAGTATGGAAGTCTCTAAGCCATAACG ACGTATAATTTGCTGAGATCACCatgtttgaatgaaaaagactttgtagt attattttttgaaaaatacggAGTTAAAAGACAGACCATGtcgtgatttt ctaaaaaagataatTTGTATGTCTTAAACGTAAAACTTTTGAGATAGATG ATGAGTGGCCTAAATAATTATTGTCACGAAGTAGAGCCTTTGCTGAGTAC TTTTTCTGTCTCGTTTTTGATGCTCTAAGGATGGTTACTTCCTCGACTTA ATGACTATTACTGGGACTTAAACGTCCTTAGAGATTTTGGAAATTTGGTC TATCAGAATGTTCCTCGTTCTTTTTTACCCTAATTGAGTCCGGCTGTCCG GTGCGTTTTCTTTTTAATCGTTTTctttcactgacctttatatatccctg gaccaagttactcaagcaaaatattatgatcggagtttttttgaaattgg tacccgtgGAGAGGGCGCTAGATCTAGTTTTGCTTGTACATTAATGATGT ATCATCGTTTGTCGTAAGGCAAAGTctcaaacactacaatggcttctttg agggtaccaactttcaaaaacttcgatcaaaggtGGCGGATATTGCTTGG ttcagggatatataaaggtcagtgttttCTATACAAAAAAATGTAAGGTA TCATTTTTATGCAATGAGATCTGCAATATCCATCTGTGTCTCTTACCCCC GTGACTTACTACCATTGCAGTCTACCTACATTCAGTCTAAGCAACAGCTG GCTCGAAGATGTCAAGTGCGGACAAAGGAAAACCAGCCTCGATATGGGTG CCATAAGTCCGAAATTATTTCGTCGTATAAATGACCGTCGTTCAAGCTTA TCTGCCGATGAAATTCAAGTCAATCACTCAACTGCATGTGTCTTAGGGTA GGATGATATGATAAATCAACATtgactaaaaaagaaaacatgacaCACAA AGAGACATGGCGTGACAGTTGAGTTCCGGACAAATATAATAGGCTTACTG TAATCCGTTTCCAGTACAGTGTGTCCCGAATAAAGTTATCAAGAAAATCT TGGCAAAATCAATCAACTCGTTGGCATATTACCGGGTGTGTCAGAAATAA GTTACcctttttgatttgatattgtaggcTTTTCGCCTTTTCTgacaatt tttaaaattgacattttaggtttttaaacataacttttgaacccatgaag taaaattaaaaagtaatacaccaaattttaagttaggctttcctctgtAT GATtcagaaacttttgaaaaacctCTCAACTACTGACaacaatattaaat taaaaaaggATAACTAATTTCTGGAACACCCGGTAGTTTAAAAAGATATT TCGATTCATTCCTAGAACAAACAACTAAATACAAGCCAGTTGTAAATCGT TAACCCTCATACTGTGATGGAGGATTTTTCATATACTAAAAACTGACCTC TTGATTCGGGACATGCTGTAAATTGCATGTTAACATGGAAATAACTGAAC AATCAATGTTCATCAAGGATGTGAGACTTTCAATAATGTTGAAACTGGTG ACGGactaaaattctgaaaataaaatgcaaaaaaaaaaaatacattagTT TACNAGACTAaaattctgaagaaaaaaaatgcaaaaaaaaaaatacatta gTTTACTTTCGACGAGTAGATTTGCTTCTTTACTTGTTCGTGAAaataaa tttcgcgaaattgaatgaaatggaaatttttaaagttttgttttcGACGT TTTGTAACTCCGAACGTTTTAGTTTTGGCGAAAGCTTGACAtcttttgga ccattttcagttgatttaaGGCCTTCTAGGAAAATACATCAACGCGAAAC GTTTCAAAATATTGACTTAATAATGGAAATAAATCGAGAAATTTGTCTCG CAGAATTGAACCTtgtgaaaattaatccaattaaagcaCACTGACAAAGA ACAGTTTAAACAATGAAATATTGATGATTTTGACGAACATTACCTTAACA TAACCAATGACATACGAAATATCGActttacaaaatagaaatactTAACC ACTCATACGCGTACAAAGTTATTCTAAATGAGACCTTCAATCTGTTACTT TTTTATGGAATTGTTCATTTAATATTTTAGCAAATTAATTATCAGACATT TTCTAGATACAGTTTTCCTTCCTTTTTGAAACAGGCCAAGCCACCCAGCT TTCCAACAAGCAACGATGAGTTTAGATCGAAGCAAGGATACTTGTCCTCA ACCTACCATAGAACGTATACCATCGTACAAAAAGCAAACACAATCTGCAA ATGCACCAACGCCTATCAATAGACAAACGCCTGCTCCCGCCCATCCGTTA TCTGGTTTCACCTGGTTCCAACCGGAGCTTGATCGTAGAGCGTGCgaaat taaattgaaccaaaacagaAGGGTGAGTACGTCTACGTTTAGGATACTGT TCGCCCCTTGAGGTACTCTGCACCAGaatgtatctcacgtttatcgcttc gtagtacactctgtgcgcattgtctgtttgataaaaaaattcccgtatgg agacctctgcgatgaagtatgatttatataaatagcaacacttctctcgt cttctccccctctctcaccaacactccatcgcagcggtcggtttgaaaaa tctcaaatgagaaaaggcaatgacaacagaccctctacggcaatgaattt tgaaattagtcgtagatactgggtctgtgtacaggcAAACTTTGAGGGAG TCAAAGGTTATTTCTCTCTGCTACTCGAGATGTTCAATGGCTCGAACGAT CACTGTCTACTTCTTGGTGTTTAAAGTTATTGTGACTTAAAAGTATTCCT AAAAGAAGCAAGGTGATTTTCCCCTGAATAAACCTTGACTAAAATTGGAA ATTATGTTCATTTGAAACTCATATGAATCCTTTTGTGTTTGTTATTTCGT AGTATTTTCAAGTCAATCTCGTTGAATTGCCTGAAGGCTGCAAtacaacg ctttttttataataatacactttataagaatgtccatgataaaaatggcc aaaaaattaaggataatgctaagaatatcaccatcatggaattttgctac tcagctaagaatgacatttttagagcattttcaattataaattgccaatt acccccaagtaaggctcactcctttcacaaaaatgccattttatgcttga gacgtatgtactaaatgtcaaatctagtctgaattaggattctaacctaa gaataatgtaagaatattttaggatgatttttttaagaaaatccatgata aaatggatttacaccattcttatgaaAATAAGCGTGTATTTGAAGCACAC ATTTCAAGGTTTTCTAAAatcttttctttactttttaggATGGTGACTTT GTGATACGAAACTCATCCAAAGCCGGTGTCCCATTTTCTATATCAATCTT TCACGATAATGTTGTCCGCAATTTACAGTAAGTGTCCGAAAAAGTTTAAC AATCGCTATTAAATGCTTTTCATTGATGTTAGGTGTATAATATTTTCTCA ATGCAGAATTTCCTaatctaccttatcggggaaaaaaatgtcggagtttt atttaaaaaagatcttgtaaatcgacgtttaaagcacttatttcggttaa taaagatgtaaaaaatatagattttaattttggttggggtttaaagaatt gggtaaaagttttggtcgggtgataaaatatcggggaaaaaattcgtagg gggaaaatttcgtcaccccttcaaaattttcgtcacttccCCCCGACATT TTTCCCAGATAAGGTATAGCAACGTAGGCAGAAATTTTCAAgatcaaaaa ttgaagaaaaagatttcgcgatttctttaaaaacaataatTCTAAAGAGC AAAACtttatggaaaaaaatataaaaggtAGAAATGTGTCCGTCCATATA TTCTGTGAATTTTCTTACTTGATAGAAACTAGCCAAAATAggccaaaatt acaaaattatctGCCTAAAAAGTATTGAACACAAACCGAAGATTAATTCT TTTCCATTTATAGGCTGCTTCAAAAAGACGGTAAAATGTACTTGGGAAGT TCTACTGAGGTAGGTCATTCATTAAACACTTATACATACTCGAAGTGACC GGGAAGGGACTCGGTGTCATCCTCCAAATAATGTTATATGCTATGTCATG CATGGTAACACGCTCCATATTGAGTAATATTAGCCATAAACTCtctggta cctaatagccgggggggggaggaggttggaaaaaatctcaaaacttaata agcggggcgttagaataaaaatgtcctaggtggaaaattttcgaaaaatt aattagtgggggggcggctattaggtacccgagagtaagccTTAATACAA TCACAGTAGAATTTTCTTCTGCCTAAAACAGATTTTCACCTCTTAAAAAC CATTTATTTATCAGTCATATTTTTGATCAGCTAAGATGGATTAATGAGTT TCTCAATAACTTTTTATTCTGCTATCTTTCAGGGGTTTGAAGGAGTACCT GAATTGGTATCGTATCATCAGAATAACGAAATCATACTCAACACTGGTGG TAAAGTGAAACTACTCAGGATTTGATGGCAATAGAAAATTTAGTACGCAT TTATAAGgaagaaaaacgaaaatatttttgggtaaTGTCAGAATGGGTGA ATCCAACCAAAGCTTTGTTGGAGCTTTTAAATTCAAGAATTCGGAAGAGA ATTCGCCTTGTGGACTTTAAAGAGCTATTTATAAGTTCATTCAATTGCAA CCGAAAATATGGGATCAACATTGATCACCATCATTGTTTTGGATCATTGC TTTTTTATTAACGGAGCTTCAAGATTAATCTCCCGCCGCCTTACTAATAG ATCTTATTGGAGTTCGGGGGTattaaaatagaaatctcttaggaattcct cgggggaattctattgtaatactcccgaaacaattccacaatgcatcgct tttttagaaaaatcaaaaacttcgaTAAGATCTATTTACATGGTCTCCGA AAAAGTCAGAACACTTACAGATatagaagaaaaaaagtattttttatgGG ATATCTATGAAAGACACTTCGGAAAGGCCGATTTAAACAATCACAAAGAC AAACTTGGTGATAGAAAATGTTTCATATTGAACCAGAGTTGTTTTTGGTG ATACTTAGTTAATTTCTTGTTGCTTTTTagtttagatttttttgttatgt aaatacgaatttgattatttttctaaataattaTTGATAGATGAATAGGT TTTCTAATGGCggataattctttttttaaatatttgtaATTATTGGTAAc ttaaatttacagaaaaatatttttttcaaatgtttataTTAAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000718XLOC_000718Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001322-exon-sc0000010-1491911889:139247..139290TCONS_00001322-exon-sc0000010-1491911889:139247..139290Clytia hemisphaericaexon
TCONS_00001322-exon-sc0000010-1510915933:139247..139290TCONS_00001322-exon-sc0000010-1510915933:139247..139290Clytia hemisphaericaexon
TCONS_00001322-exon-sc0000010-1575043694:139247..139290TCONS_00001322-exon-sc0000010-1575043694:139247..139290Clytia hemisphaericaexon
TCONS_00001322-exon-sc0000010-1491911889:140728..140843TCONS_00001322-exon-sc0000010-1491911889:140728..140843Clytia hemisphaericaexon
TCONS_00001322-exon-sc0000010-1510915933:140728..140843TCONS_00001322-exon-sc0000010-1510915933:140728..140843Clytia hemisphaericaexon
TCONS_00001322-exon-sc0000010-1575043694:140728..140843TCONS_00001322-exon-sc0000010-1575043694:140728..140843Clytia hemisphaericaexon
TCONS_00001322-exon-sc0000010-1491911889:145789..145840TCONS_00001322-exon-sc0000010-1491911889:145789..145840Clytia hemisphaericaexon
TCONS_00001322-exon-sc0000010-1510915933:145789..145840TCONS_00001322-exon-sc0000010-1510915933:145789..145840Clytia hemisphaericaexon
TCONS_00001322-exon-sc0000010-1575043694:145789..145840TCONS_00001322-exon-sc0000010-1575043694:145789..145840Clytia hemisphaericaexon
TCONS_00001322-exon-sc0000010-1491911889:146166..147125TCONS_00001322-exon-sc0000010-1491911889:146166..147125Clytia hemisphaericaexon
TCONS_00001322-exon-sc0000010-1510915933:146166..147125TCONS_00001322-exon-sc0000010-1510915933:146166..147125Clytia hemisphaericaexon
TCONS_00001322-exon-sc0000010-1575043694:146166..147125TCONS_00001322-exon-sc0000010-1575043694:146166..147125Clytia hemisphaericaexon
TCONS_00001322-exon-sc0000010-1491911889:147920..148090TCONS_00001322-exon-sc0000010-1491911889:147920..148090Clytia hemisphaericaexon
TCONS_00001322-exon-sc0000010-1510915933:147920..148090TCONS_00001322-exon-sc0000010-1510915933:147920..148090Clytia hemisphaericaexon
TCONS_00001322-exon-sc0000010-1575043694:147920..148090TCONS_00001322-exon-sc0000010-1575043694:147920..148090Clytia hemisphaericaexon
TCONS_00001322-exon-sc0000010-1491911889:148541..148561TCONS_00001322-exon-sc0000010-1491911889:148541..148561Clytia hemisphaericaexon
TCONS_00001322-exon-sc0000010-1510915933:148541..148561TCONS_00001322-exon-sc0000010-1510915933:148541..148561Clytia hemisphaericaexon
TCONS_00001322-exon-sc0000010-1575043694:148541..148561TCONS_00001322-exon-sc0000010-1575043694:148541..148561Clytia hemisphaericaexon
TCONS_00001322-exon-sc0000010-1491911889:148845..148919TCONS_00001322-exon-sc0000010-1491911889:148845..148919Clytia hemisphaericaexon
TCONS_00001322-exon-sc0000010-1510915933:148845..148919TCONS_00001322-exon-sc0000010-1510915933:148845..148919Clytia hemisphaericaexon
TCONS_00001322-exon-sc0000010-1575043694:148845..148919TCONS_00001322-exon-sc0000010-1575043694:148845..148919Clytia hemisphaericaexon
TCONS_00001322-exon-sc0000010-1491911889:149525..149567TCONS_00001322-exon-sc0000010-1491911889:149525..149567Clytia hemisphaericaexon
TCONS_00001322-exon-sc0000010-1510915933:149525..149567TCONS_00001322-exon-sc0000010-1510915933:149525..149567Clytia hemisphaericaexon
TCONS_00001322-exon-sc0000010-1575043694:149525..149567TCONS_00001322-exon-sc0000010-1575043694:149525..149567Clytia hemisphaericaexon
TCONS_00001322-exon-sc0000010-1491911889:151931..152168TCONS_00001322-exon-sc0000010-1491911889:151931..152168Clytia hemisphaericaexon
TCONS_00001322-exon-sc0000010-1510915933:151931..152168TCONS_00001322-exon-sc0000010-1510915933:151931..152168Clytia hemisphaericaexon
TCONS_00001322-exon-sc0000010-1575043694:151931..152168TCONS_00001322-exon-sc0000010-1575043694:151931..152168Clytia hemisphaericaexon
TCONS_00001322-exon-sc0000010-1491911889:153135..153223TCONS_00001322-exon-sc0000010-1491911889:153135..153223Clytia hemisphaericaexon
TCONS_00001322-exon-sc0000010-1510915933:153135..153223TCONS_00001322-exon-sc0000010-1510915933:153135..153223Clytia hemisphaericaexon
TCONS_00001322-exon-sc0000010-1575043694:153135..153223TCONS_00001322-exon-sc0000010-1575043694:153135..153223Clytia hemisphaericaexon
TCONS_00001322-exon-sc0000010-1491911889:153810..153855TCONS_00001322-exon-sc0000010-1491911889:153810..153855Clytia hemisphaericaexon
TCONS_00001322-exon-sc0000010-1510915933:153810..153855TCONS_00001322-exon-sc0000010-1510915933:153810..153855Clytia hemisphaericaexon
TCONS_00001322-exon-sc0000010-1575043694:153810..153855TCONS_00001322-exon-sc0000010-1575043694:153810..153855Clytia hemisphaericaexon
TCONS_00001322-exon-sc0000010-1491911889:154279..155140TCONS_00001322-exon-sc0000010-1491911889:154279..155140Clytia hemisphaericaexon
TCONS_00001322-exon-sc0000010-1510915933:154279..155140TCONS_00001322-exon-sc0000010-1510915933:154279..155140Clytia hemisphaericaexon
TCONS_00001322-exon-sc0000010-1575043694:154279..155140TCONS_00001322-exon-sc0000010-1575043694:154279..155140Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000010supercontigsc0000010:139247..155140 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.04087 4.91785 16.7593 9.54854 1.8323 2.94183 2.81154 0.160332 1.67032 3.49504 1.92689 1.58444 2.4808 3.67482 0.433667 2.6798 2.66112 0.531353 0.000490841 2.56768 0.462402 1.53278 3.78142 4.65546 2.30777 4.95332 9.14906 7.29492 0.00314361 0.00178863
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00001322 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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