TCONS_00001322 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001322
Unique NameTCONS_00001322
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2717

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001322 ID=TCONS_00001322|Name=TCONS_00001322|organism=Clytia hemisphaerica|type=transcript|length=2717bp
TGACGACGAAGATTACGAAAATGCTGATGCAGGATTTTGTGAAGGCTCGC
CACCTCTTCAGCCACCGCTTCAGCCACCACCAAGAACATACAGTCAAAAT
GTGAACACTTTCAACAATAGTAATGATAGCATAGATGAATCCAAATCATA
CAACTATCTGtcgCAAGACGATCAAGATGATATATATGATACACCAGAAA
CTGAAGAAATAGCTCGCCCACCACCTCTGCAACAGAAACCACAACGTCCA
GGAGGGTACGCACGACAACCACAACACCAAACTCCAATACCACAACACCA
ATCTCCAATACCACAACACCAATCTCCAATACCACAACACCAATCTCCAG
CAGCACACCAAGATAACTTCAATATGAGCAATAAACGCACACAAAACATT
GATAAGCATCGTCAACAATCGTTCGCTAATAGTCGAGCAATGTTCGAACA
GAGATCAACTTCACCTCCACAACCAGCTATCAATCGATCAGCTAAACCAC
CTGTACAACAACGTCGAAGTGATTCTAACAATAACCCGCCCTTCGCTCCC
AAACCCAATATTTCTAAGCGCCCAACGATTCCAACGCCAGCAGCGCAACA
AAGGGTGGTACCGCCCCAACCGATCCAACTTCAAGAACCTCAACATTATG
AAATGGATAACCAAAGCGAAGACTCGGGCTGCCATGAGGACTTTTACATT
GAGCCGCATCAAGCCAAAAATGCCGTCATACCCCACGAAGAAGAAACGTA
TGAGGTCACAGACGGGCCAACCTCCCCGGTCGAAATCATATCCTCAAAAC
CTAAAGGCATGCCTGGTCAGCAATTCATTACACAACTAAATCGAATGACC
TTAGAAAGATCTGCTCCCTCACTTCCCGCCTCACAGAGCAAACCAATGGC
TGGAAGACCTCTCGTACCGACCCCAGATCAAGAAGAAACTTATGAAATCG
CACCTGAGAACCCTCGTTCACCACCATTACCCGGTAACCACCCTTCAGCC
GCAAAAAGCCCCGGCATCCCATCTCGACCTTTCGTTCAGAGCCGGCCACC
AATGCCAGTACCATCACCACCACCACAGGAAGAAGAAACCTATGAAGTGA
CGCCCGATCAAGCGCCCGCTTTACCACCCTCACATCCTTCCTCGAGAAAA
TCTTCAAGTACTTCGTCTATAGGGGAATCACCGAGAACGTCCATTAAAGA
CAGATTACCAAATCCTCGAGATAACATACAAGAAGATTATGAGATGATAA
CTCATAGCCAAAGACCGCCTCCTCAACTTCCTATCTCTTCACGTCCATCT
CCACCCCAACAAAGGCGCCCACCACCCTCGTTAGAACCAAAAGGTCAAGA
ACCTGTATTACCTCcgCGCAACGAGAAACCGCAACGCCTTTTACCCTCGC
CTTCGCAAGAAATCAACATTCCACCCAGAACGCCAAAAATGTCACAACCA
CAAAACTCGATGCCTCCAAAGCTTATGGGAAGGCCAAGCCACCCAGCTTT
CCAACAAGCAACGATGAGTTTAGATCGAAGCAAGGATACTTGTCCTCAAC
CTACCATAGAACGTATACCATCGTACAAAAAGCAAACACAATCTGCAAAT
GCACCAACGCCTATCAATAGACAAACGCCTGCTCCCGCCCATCCGTTATC
TGGTTTCACCTGGTTCCAACCGGAGCTTGATCGTAGAGCGTGCgaaatta
aattgaaccaaaacagaAGGgATGGTGACTTTGTGATACGAAACTCATCC
AAAGCCGGTGTCCCATTTTCTATATCAATCTTTCACGATAATGTTGTCCG
CAATTTACAGCTGCTTCAAAAAGACGGTAAAATGTACTTGGGAAGTTCTA
CTGAGGGGTTTGAAGGAGTACCTGAATTGGTATCGTATCATCAGAATAAC
GAAATCATACTCAACACTGGTGGTAAAGTGAAACTACTCAGGATTTGATG
GCAATAGAAAATTTAGTACGCATTTATAAGgaagaaaaacgaaaatattt
ttgggtaaTGTCAGAATGGGTGAATCCAACCAAAGCTTTGTTGGAGCTTT
TAAATTCAAGAATTCGGAAGAGAATTCGCCTTGTGGACTTTAAAGAGCTA
TTTATAAGTTCATTCAATTGCAACCGAAAATATGGGATCAACATTGATCA
CCATCATTGTTTTGGATCATTGCTTTTTTATTAACGGAGCTTCAAGATTA
ATCTCCCGCCGCCTTACTAATAGATCTTATTGGAGTTCGGGGGTattaaa
atagaaatctcttaggaattcctcgggggaattctattgtaatactcccg
aaacaattccacaatgcatcgcttttttagaaaaatcaaaaacttcgaTA
AGATCTATTTACATGGTCTCCGAAAAAGTCAGAACACTTACAGATataga
agaaaaaaagtattttttatgGGATATCTATGAAAGACACTTCGGAAAGG
CCGATTTAAACAATCACAAAGACAAACTTGGTGATAGAAAATGTTTCATA
TTGAACCAGAGTTGTTTTTGGTGATACTTAGTTAATTTCTTGTTGCTTTT
Tagtttagatttttttgttatgtaaatacgaatttgattatttttctaaa
taattaTTGATAGATGAATAGGTTTTCTAATGGCggataattcttttttt
aaatatttgtaATTATTGGTAActtaaatttacagaaaaatatttttttc
aaatgtttataTTAAAA
Run BLAST on NCBI

transcript from alignment at sc0000010:139247..155140+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001322 ID=TCONS_00001322|Name=TCONS_00001322|organism=Clytia hemisphaerica|type=transcript|length=15894bp|location=Sequence derived from alignment at sc0000010:139247..155140+ (Clytia hemisphaerica)
TGACGACGAAGATTACGAAAATGCTGATGCAGGATTTTGTGAAGGTAGTA
ACAATCGAGTATTATATATGTCAAAGTATCGTACTCTAGAGATTCACTAT
TTCACGGCTCGACTATTTATTCCTTAAAGATTAGAATGAATTGTACGGAA
CATTAGAAGGAGCGGGGATCCGAATCGCGAATCCCTGGTTcgagacgctg
acgcctttgaccacttagCCATCACTCCATAATTGCTCTATTTTGACTGA
CCATTTGATACAATGGTTTTTCGAAATGAACTTTCAATTGTAGTAACTGT
ATTTCTCTCAGCTTCTTGTAAATGTTTACGAATTTTTAGAAAGAAGAGAG
GAACGATAAATATGATAGCAATTAGAAACTTTGGTAATCATATTTATGGG
ACTGTTGCTGTAAGGTTAATCTTTTTTGTCAAGTTGTGTACAGAAGATAA
CCTGTGTTAAATTTACTGTGTTAATTTTGTTGCGCaatctaaaatttttc
tctTGATTAATTTTTAGGCTCGCCACCTCTTCAGCCACCGCTTCAGCCAC
CACCAAGAACATACAGTCAAAATGTGAACACTTTCAACAATAGTAATGAT
AGCATAGATGAATCCAAATCATACAACTATCTGGTAGGTTATTTTGTCAA
CAGTTTTTGTACGACTTTTTACACGTGAACTTATATTTTGTATGCCCGAA
CATAATTTTGTTCGCTTACTATTTCTTTGGTGATAATTGCATTTAGGTAT
TGGGTAACCCTTAAAACCCTTCCTCTGCTTATACTAAAAAGTCCTgttca
atgtgaaaaagatgTTGGACTTTGACTTGGTTTTCTTGAGTGTCTACATT
GATCGAGCCTAGTGTATAACTTCATAGAGCCCCCCCCCCNTGAGGATATT
TACGGAAATTCGTAACTTGAATACGTGACCGACCCTCCAtattttccctc
ttttttttaCAGTTTGACGACGAAGATTACGAAAATGCTGATGCAGGATT
TTGTGAAGGTAGTAACAATCGAGTATTATATATGTCAAAGTATCGTACTC
TAGAGATTCACTATTTCACGGCTCGACTATTTATTCCTTAAAGATTAGAA
TGAATTGTACGGAACATTAGAAGGAGCGGGGATCCGAATCGCGAATCCCT
GGTTcgagacgctgacgcctttgaccacttagCCATCACTCCATAATTGC
TCTATTTTGACTGACCATTTGATACAATGGTTTTTCGAAATGAACTTTCA
ATTGTAGTAACTGTATTTCTCTCAGCTTCTTGTAAATGTTTACGAATTTT
TAGAAAGAAGAGAGGAACGATAAATATGATAGCAATTAGAAACTTTGGTA
ATCATATTTATGGGACTGTTGCTGTAAGGTTAATCTTTTTTGTCAAGTTG
TGTACAGAAGATAACCTGTGTTAAATTTACTGTGTTAATTTTGTTGCGCa
atctaaaatttttctctTGATTAATTTTTAGGCTCGCCACCTCTTCAGCC
ACCGCTTCAGCCACCACCAAGAACATACAGTCAAAATGTGAACACTTTCA
ACAATAGTAATGATAGCATAGATGAATCCAAATCATACAACTATCTGGTA
GGTTATTTTGTCAACAGTTTTTGTACGACTTTTTACACGTGAACTTATAT
TTTGTATGCCCGAACATAATTTTGTTCGCTTACTATTTCTTTGGTGATAA
TTGCATTTAGGTATTGGGTAACCCTTAAAACCCTTCCTCTGCTTATACTA
AAAAGTCCTgttcaatgtgaaaaagatgTTGGACTTTGACTTGGTTTTCT
TGAGTGTCTACATTGATCGAGCCTAGTGTATAACTTCatagagccccccc
ccccagcggttttcatgatggcgtgattggtGTGTGATCAGAGGAACCAA
CGTGATCATTatagaaaggaaatttaactTGTGATTGTgtgatttgaaag
gtgactgggGGCCTCTTCATACAGTTCAACTCCTGATTCAGACAAACATA
GATTTTATATCATGATATTGCAATGCTCCTAAGTAATTTAAAATggtttt
aaaagtgttttttgtTCACACGGTATCGGTTTGCAGCACCTCATTTTACG
AAGTTCtgatatttgttttttataagtaaTCAAATGTAACTTATCATTCA
GGACTAGGATTACCCCCAGTACCAAACAAGATAGGATCGGCTTACATAGT
TTTAACACGGGGAATTTCGGCTGTGTGAAGCCATCAAAGTTCCATTTATA
AAGTGCGAGATCCAGTTGAGAAAATctacatattggaaaaggtcttTTCG
GGGAAAATGTTTTGAAGTTTTGGGGGTTTCTTTTCCTTGTAAGACTGATA
TGATAGTGACTAAAATTCAACGAATTTAACCCATGGGAAAATGAAAGTAA
CAAACATTTTTGGAGAACTCAAAGTCTGTTAAAAAATTAGTATGCTCCAa
tatgatattttgaattttttcggTCAAGTAAAAAAGGTCAGGGGGATTAT
TTTGGGGAATTACTTAAAAAATGCCATGCAGTATTTGAAAGAGAAATTGC
TTTATATGATATACTTTCTTAAACAAATACCTTTGCATCAATTATCGTGT
TTAGATTAAAAAATTTGTGTGTACAGTACGTCaacattttgagaaattca
aaGTACACGATTtattagtctacacaatagacagatacaggcttttaggc
cttactcttgttCTATAGGCACTgatataggcggccactagtgaacccca
ccgggaattgcttattaataggtttaaacataatagacaacattcacaaa
agatgtttatcaatagagattttaaataaaagaatgtttaaaacacagNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACGATTTATTAACAGGA
CTAAACACGTCtctttgtttttaatgtttatcTTGTTGTCGAAATCGGtg
aatcatttttctttttgtatacACAGGGCATCCCCTCTCATTAATTTTCT
CGTCTTTTTTGATCGAACTTGTATCATATAAGTGTTTATACGCTTGATGA
TTGAAATctatgtttaaagattttttactgctgaaagtttaaaaaggaag
tTTTTTAGGGAAGGctgtttaaggctttttgaggattttttaaaaaggtt
tttggGGATTTTGGAAACAAGCCTTAGAATTATTCAAAAATGTATGAAGC
CTTCCCTATGGTAAGTGATATTTTGCTTTGAATTCTTGAAATTATAATCT
TAAATCTCTTTTTAGCAGGGGGGGTGTCGGTACTAAAACccaagacatat
atgagtactacaaggttttttgacgatttttgacataccctcacctaatt
tttgaaaaaggaattttagtacacatgtactgaaatttatttttacattt
tagcaTAGTGACCACCTAAATAAGGCTTATTTTGGAATTCGGTTCGAAGA
ATGTGGGTCTttggactttcaacaaaatgccAACTCTGGTTATTTAAGCT
GTCAATGAACCTGATATATCTCTATCTATTCTAGATAAAGACTCAGAAAC
AGTCAAGACACTTTTGCCCTGCTCTACTTTAGTTATTGCAAAGATTGATG
GGTTATTTTTCACCTCTAATTTACAGAggaacctttttcctcagttgaga
taaaaatttcctattgaaatattaatggggatacaaattctattgttcca
aggttaaaaacccagtggggatatgattttggagtgcaatttttacacat
ggaattttgagtggggatgaaatcaaagtcaatttcccagtagggctgaa
attcaagggtattctaccaccggggacaaaatttttgcttaatttgtgac
acagggacgtatttaaatcttatatagagagtttttattttttcattttg
cctaaaatgctcAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNtagttaaatttcctaaaatttggtgatttttagtactca
tgtattaaaatttttcttaaatttcttgaagacccccacctaatttggga
ttttagtacacatggtactaaaatgcttttaggctttttttgtaatacca
ccacgtcactaaaagtcatgatgtctgaaattttagtaccgacccccccc
cctctttttaGCTAAATTTATAGTTTTTCACACAAAGACtataagctcta
gtttagacggccgactttctgccctgtctattctaattgttagagtaggc
agaagtTGGGCAAAAAGTTGGCAGctaaagacattgcattgacgtcaaaa
gagggcgatgcattgactttagacggcccactttatgcccactttgattc
acaattagaatagacagggcaaaaagtgggctgtctaaactagagctaag
ctCGTCTGAAAGGGTAAAAGAAAATTGTCAATACTTTGTATGTATTGTCA
GTACCTGGTAACTTTCAGTTTCGGAAATTTTCAATGTCATTATTAAGTAT
TCTACTCATTTTATCTTGAATTTGGTCACAACTTTCATTTAGTATTGGCG
TCATAAATGAGGTATTATTTCCTTGAAAGTTTGTGAGAGATCTATGGGCC
TGTGTCAAAAAATGTTGCCTTTGAAGTAGGTTTAAAGCATTTTGTACATT
TACGACGAATCTTTGTTAAAAAACAATAGGccgcaaaattaaacaccttt
tttgacaacaaataatatgcccataacttttgatctagagaagttgggat
tTTGAtgcaatacacttttttgctcagtttgaagagttCTTACGTAGTAT
AGGTcttctttgattttgaagacccccaaaaatcatgaattttctgacct
ttcaattttgtttggaaacgcaaaaaatcgaaaattatgcAAAAACTGCA
GTTTTTCAAggttggtaacattcaaattccgaatcagcaccctcaaattg
accaaaatcaatCATGAaaggacattttgaaaaaaagtgaaacgttttgg
tGGCACTGCACTGGCCTACAAGTTTCCATTTCAATAGAGGGAAAGGTAAT
GATGTTTATCTCTAAGCAATTATAAATGAACGATCTTAAAGCAGTAAATT
GCTTTTATAAATGGTTTTGAAATTAGCTAACCGCGTCTTCTGAAATGATT
TCTATTAACTTAAATTAAGTTTTGGCTCCTATGTCATATGATACGTTTCG
TTTAAAAGAACATAGGCGGACAGTTTTATCATGAAATTTAAATTGATAGA
GATATTGTTAAGTAATCTGGTCTATTGAAAACAACTTTTTAGCGTTCATT
ATCTGTAGAAAATAGATTGTAATCAAAGTCACAGCTTaggttgtctgtac
acagacccgatatctacggctaatttcaaaaattcatttccgtagacaaa
cgtgagatacactctggtacagagtacagCTTAGGGATCTGGATATTACT
TTTGCTTTTTGCGTTTTGTTCCTATTTCGAATTTAATCAGGTATAGATAT
TCTGTGATTGAAATATCTCAATTCTGCCCAATTTAGTAACTATTACTGCT
ACTTTAATCATATAGCTTTCGTGcttaatatttttggaaaatagtttTGG
AAGCCCTAGCGAATTTATTGTATTGTGTTAGCATCTTGAAGACATGGTTT
TATGGGATTTGATTGTCTCAATTCTGCTATAATTTAGTAAAAAATTTACT
TCAATATACTTCACTCGTATAGCTTTTGTGCTCAATGTTTTATGtaggaa
tacacgtttttttataagaacaaactatataagaacataaggcttcactg
gccaaaatgttaagagcaagttaagaacattttaaggctttgtggactca
aaaccacccaatttcttaggaaaatagtcaaaattattcacaaaatggtc
aaaataagaacatgttcagaacaattttaggcttaaaactcaaaaagttc
agaacattcaaggcttcaaaaaatttggatgtttttataaaaaaaacgcg
tAGTCCTGGTAACCCTAGCAAATTTACTTGTATTTTCTCAATATCTTTAC
TttccttttctttatttttcatttatcacatttttttttcagtcgCAAGA
CGATCAAGATGATATATATGATACACCAGAAACTGAAGAAATAGGTTGGT
GTATTTGTATTTAAAGTTCTTGACTAGCATAATTGAATGTCCAAGTTATT
TTGTGACCAGCCAAAAGTATAGTTTTttattctgtttgttttttttatac
aaGTTCGTCAAAATTAGACGATATGTGGCGACTAGGACAGAAATAATTTG
ATATTGAACGAAAACAACTATGATGATCAGTTAATcatggaaaaatttta
aaccccaGATCAAAATATTATTCAGGAATATTATTACAGTCTTGGTCAAC
TTAATGTATACACCGAATGTCAAAGTTTGAAACAGTCCATTTTTCATACT
TTCGATTCAACTTTTACAGCTCGCCCACCACCTCTGCAACAGAAACCACA
ACGTCCAGGAGGGTACGCACGACAACCACAACACCAAACTCCAATACCAC
AACACCAATCTCCAATACCACAACACCAATCTCCAATACCACAACACCAA
TCTCCAGCAGCACACCAAGATAACTTCAATATGAGCAATAAACGCACACA
AAACATTGATAAGCATCGTCAACAATCGTTCGCTAATAGTCGAGCAATGT
TCGAACAGAGATCAACTTCACCTCCACAACCAGCTATCAATCGATCAGCT
AAACCACCTGTACAACAACGTCGAAGTGATTCTAACAATAACCCGCCCTT
CGCTCCCAAACCCAATATTTCTAAGCGCCCAACGATTCCAACGCCAGCAG
CGCAACAAAGGGTGGTACCGCCCCAACCGATCCAACTTCAAGAACCTCAA
CATTATGAAATGGATAACCAAAGCGAAGACTCGGGCTGCCATGAGGACTT
TTACATTGAGCCGCATCAAGCCAAAAATGCCGTCATACCCCACGAAGAAG
AAACGTATGAGGTCACAGACGGGCCAACCTCCCCGGTCGAAATCATATCC
TCAAAACCTAAAGGCATGCCTGGTCAGCAATTCATTACACAACTAAATCG
AATGACCTTAGAAAGATCTGCTCCCTCACTTCCCGCCTCACAGAGCAAAC
CAATGGCTGGAAGACCTCTCGTACCGACCCCAGATCAAGAAGAAACTTAT
GAAATCGCACCTGAGAACCCTCGTTCACCACCATTACCCGGTAACCACCC
TTCAGCCGCAAAAAGCCCCGGCATCCCATCTCGACCTTTCGTTCAGAGCC
GGCCACCAATGCCAGTACCATCACCACCACCACAGGAAGAAGAAACCTAT
GAAGTGACGCCCGATCAAGCGCCCGCTTTACCACCCTCACATCCTTCCTC
GAGAAAATCTTCAAGTACTTCGTCTATAGGTaagtaaaagagaaaaaaat
ttgccaGCCTGGTGATCTTTCTGGTTACTGTGAACATCACAGTTTGGTTT
TTTCTGAAATTNAATTTGCCAACCTGGTGATCTTTCTGGTTACTGTGAAC
ATCACAGTTtggttttttctgaaatttaacCTTGTGAGGACGGACAATTT
TATCGCGTATGTCTCATCACATTTCTGATCATATAATGGAGAGCACGTAT
CCTCGTGTTATGTTCTAGCAGGTTACATCTTTATATATGTGAAAAAGTAA
GAATTTCTCTCcgactatattcactcaggagatttgggtggcagagcagc
atatgcatttcgtccttattgaGACTCATCCATCAGATATATATCTATCA
GTGAATTGAGTTTCCTTCAAAAGAACTCCTATCTTGTGATTTGATTGATT
AAGCCTTCATCAAAAATATCCTGGATAATAATTGTGGCGTGCAACTTAGT
GTCCGGTATCACAGCCTGCAGTTTCATTTCTCGTCTAATTTGGaactagc
ctagttaactaagcctgtattcacaaggctaggataCACCGCTAATGGCA
ATATAGcattttcggcgctttaaagattttttatatttacggattttatg
tttgccttggaatactggtAATTCAGTTACAagttaccatcagatttatc
ctagtgactgaatcaaaccaGTTTAGATTTCTAGGCTTATTTGGAGCTAG
GTGGTAATAATATCTAAGCAGGTCATAAACTATTCGATTCATTCTACCAT
CATCTATCTTCTAATACCTACAGGGGAATCACCGAGAACGTCCATTAAAG
ACAGATTACCAAATCCTCGAGATAACATACAAGAAGATTATGAGATGATA
ACTCATAGCCAAAGACCGCCTCCTCAACTTCCTATCTCTTCACGTCCATC
TCCACCCCAACAAAGGCGCCCACCACCCTCGTTAGAACCAAAAGGTAATG
ATCATTCTTCTCgttgaatttctttttgtacTTGCAGGTGTGTAGCAACT
TATTCACATTCTTTACCAAGTAGGATGTTTAGGACATTCATTATATTCCA
GATTTTTCCacgaaaaagttgattttgtattggaaatccaggagttacaa
aaaacattttacctTAGAAATCCGCtatcgtccaccccctgtatgctGTT
TCTCAACAGCATTTCttcaactcaaaatttcagaaaaaaaacttttatcc
aCTGACATTggaattatttttctaaaatttaaagtGAATTTTCGTGAGGG
GTATTGAAACTCTAGAAACTATGATCATTAATATTTTGGGGAATGAAAAA
TAGGATTCTGTTGATATGTTGATTCTTTGTATACAAAGAGAAAACACAAG
TTGACATGCATGATAtcgttaatatttttttgttgctttttaagGTCAAG
AACCTGTATTACCTCGTAAgcataaatatttatatttcattattttgtaa
GCTAAGTCGAGTCTTCATGGTCCCTTACttataaagattttgttttaaaa
aaaaactacgaACGAGGGGGGGggatttaaaactttctgatagTTGGTCT
TTTATTTTAGCTAGAAAACTTGAGCTTTTGGAAGCCGAAGATAGTGATCT
GATGACCCCTGATGCTGTATTGTGCTCCAAAGAACTTAATATTTCCTTTT
CAGCCaaacatattttcaatatatccttcaaaatatttttcatttcagcg
CGCAACGAGAAACCGCAACGCCTTTTACCCTCGCCTTCGCAAGAAATCAA
CATTCCACCCAGAACGCCAAAAAGTAAGTCAACTCGTTATATGCACCATA
GCAATGTCTTTCACGGACCCaacatctgattggttgaaattgacgtattg
actgaatttaccaatcagctattggttccgtgatgtaatatcagaagaca
ttgcaatggtgcatgtAATGAATAGGGTGTGTTTATAATTGATTGGTATT
TTAAAGACAGGGATATCAATACGCTAACGAAGTTTTTTCTCTGTTGCCAT
CTTCTGCTCGAGAGAAAGATTCAAAGAAATTGTGTTTTATCTTTGAGACT
TTCTGATCTGAAGGTACCAAACTTCACACTACTGATTGTATTATATGCTG
CAATTAAAACCATTGTATAACAAAAACCCTCGACACAAGATTACCTACGA
ACCAGATTTTGCCAATTCTTTGGGGCGCACATGGTttatacccagctggc
acacaacgttgtttcaacgttcatctaacgttatatggacgctgtgaacg
ttagataaacgtcgaaaaaacgttatgtgccagctggatAGTAAATACTC
TTGAATGATAAGTGAGGGTAATAAATTGTTGGCAATAGATAAATTGGAAC
ATCATGTCTTGTTTCTTTTTCCATACAGTGTCACAACCACAAAACTCGAT
GCCTCCAAAGCTTATGGGAAGGTAAGCAAAATACTGGGTTTTTGAAACTT
TGCGTTTGTTCATGGTTCCTTTAGGTACGACATTTACATAGTTCAGGTGG
AAAGCTTTCACGTAACTTTTCGCGAGGttgaaaattcgcgaaaattattA
AATAAGTTTTCGTAAAATAAAAGGAGTATGGAAGTCTCTAAGCCATAACG
ACGTATAATTTGCTGAGATCACCatgtttgaatgaaaaagactttgtagt
attattttttgaaaaatacggAGTTAAAAGACAGACCATGtcgtgatttt
ctaaaaaagataatTTGTATGTCTTAAACGTAAAACTTTTGAGATAGATG
ATGAGTGGCCTAAATAATTATTGTCACGAAGTAGAGCCTTTGCTGAGTAC
TTTTTCTGTCTCGTTTTTGATGCTCTAAGGATGGTTACTTCCTCGACTTA
ATGACTATTACTGGGACTTAAACGTCCTTAGAGATTTTGGAAATTTGGTC
TATCAGAATGTTCCTCGTTCTTTTTTACCCTAATTGAGTCCGGCTGTCCG
GTGCGTTTTCTTTTTAATCGTTTTctttcactgacctttatatatccctg
gaccaagttactcaagcaaaatattatgatcggagtttttttgaaattgg
tacccgtgGAGAGGGCGCTAGATCTAGTTTTGCTTGTACATTAATGATGT
ATCATCGTTTGTCGTAAGGCAAAGTctcaaacactacaatggcttctttg
agggtaccaactttcaaaaacttcgatcaaaggtGGCGGATATTGCTTGG
ttcagggatatataaaggtcagtgttttCTATACAAAAAAATGTAAGGTA
TCATTTTTATGCAATGAGATCTGCAATATCCATCTGTGTCTCTTACCCCC
GTGACTTACTACCATTGCAGTCTACCTACATTCAGTCTAAGCAACAGCTG
GCTCGAAGATGTCAAGTGCGGACAAAGGAAAACCAGCCTCGATATGGGTG
CCATAAGTCCGAAATTATTTCGTCGTATAAATGACCGTCGTTCAAGCTTA
TCTGCCGATGAAATTCAAGTCAATCACTCAACTGCATGTGTCTTAGGGTA
GGATGATATGATAAATCAACATtgactaaaaaagaaaacatgacaCACAA
AGAGACATGGCGTGACAGTTGAGTTCCGGACAAATATAATAGGCTTACTG
TAATCCGTTTCCAGTACAGTGTGTCCCGAATAAAGTTATCAAGAAAATCT
TGGCAAAATCAATCAACTCGTTGGCATATTACCGGGTGTGTCAGAAATAA
GTTACcctttttgatttgatattgtaggcTTTTCGCCTTTTCTgacaatt
tttaaaattgacattttaggtttttaaacataacttttgaacccatgaag
taaaattaaaaagtaatacaccaaattttaagttaggctttcctctgtAT
GATtcagaaacttttgaaaaacctCTCAACTACTGACaacaatattaaat
taaaaaaggATAACTAATTTCTGGAACACCCGGTAGTTTAAAAAGATATT
TCGATTCATTCCTAGAACAAACAACTAAATACAAGCCAGTTGTAAATCGT
TAACCCTCATACTGTGATGGAGGATTTTTCATATACTAAAAACTGACCTC
TTGATTCGGGACATGCTGTAAATTGCATGTTAACATGGAAATAACTGAAC
AATCAATGTTCATCAAGGATGTGAGACTTTCAATAATGTTGAAACTGGTG
ACGGactaaaattctgaaaataaaatgcaaaaaaaaaaaatacattagTT
TACNAGACTAaaattctgaagaaaaaaaatgcaaaaaaaaaaatacatta
gTTTACTTTCGACGAGTAGATTTGCTTCTTTACTTGTTCGTGAAaataaa
tttcgcgaaattgaatgaaatggaaatttttaaagttttgttttcGACGT
TTTGTAACTCCGAACGTTTTAGTTTTGGCGAAAGCTTGACAtcttttgga
ccattttcagttgatttaaGGCCTTCTAGGAAAATACATCAACGCGAAAC
GTTTCAAAATATTGACTTAATAATGGAAATAAATCGAGAAATTTGTCTCG
CAGAATTGAACCTtgtgaaaattaatccaattaaagcaCACTGACAAAGA
ACAGTTTAAACAATGAAATATTGATGATTTTGACGAACATTACCTTAACA
TAACCAATGACATACGAAATATCGActttacaaaatagaaatactTAACC
ACTCATACGCGTACAAAGTTATTCTAAATGAGACCTTCAATCTGTTACTT
TTTTATGGAATTGTTCATTTAATATTTTAGCAAATTAATTATCAGACATT
TTCTAGATACAGTTTTCCTTCCTTTTTGAAACAGGCCAAGCCACCCAGCT
TTCCAACAAGCAACGATGAGTTTAGATCGAAGCAAGGATACTTGTCCTCA
ACCTACCATAGAACGTATACCATCGTACAAAAAGCAAACACAATCTGCAA
ATGCACCAACGCCTATCAATAGACAAACGCCTGCTCCCGCCCATCCGTTA
TCTGGTTTCACCTGGTTCCAACCGGAGCTTGATCGTAGAGCGTGCgaaat
taaattgaaccaaaacagaAGGGTGAGTACGTCTACGTTTAGGATACTGT
TCGCCCCTTGAGGTACTCTGCACCAGaatgtatctcacgtttatcgcttc
gtagtacactctgtgcgcattgtctgtttgataaaaaaattcccgtatgg
agacctctgcgatgaagtatgatttatataaatagcaacacttctctcgt
cttctccccctctctcaccaacactccatcgcagcggtcggtttgaaaaa
tctcaaatgagaaaaggcaatgacaacagaccctctacggcaatgaattt
tgaaattagtcgtagatactgggtctgtgtacaggcAAACTTTGAGGGAG
TCAAAGGTTATTTCTCTCTGCTACTCGAGATGTTCAATGGCTCGAACGAT
CACTGTCTACTTCTTGGTGTTTAAAGTTATTGTGACTTAAAAGTATTCCT
AAAAGAAGCAAGGTGATTTTCCCCTGAATAAACCTTGACTAAAATTGGAA
ATTATGTTCATTTGAAACTCATATGAATCCTTTTGTGTTTGTTATTTCGT
AGTATTTTCAAGTCAATCTCGTTGAATTGCCTGAAGGCTGCAAtacaacg
ctttttttataataatacactttataagaatgtccatgataaaaatggcc
aaaaaattaaggataatgctaagaatatcaccatcatggaattttgctac
tcagctaagaatgacatttttagagcattttcaattataaattgccaatt
acccccaagtaaggctcactcctttcacaaaaatgccattttatgcttga
gacgtatgtactaaatgtcaaatctagtctgaattaggattctaacctaa
gaataatgtaagaatattttaggatgatttttttaagaaaatccatgata
aaatggatttacaccattcttatgaaAATAAGCGTGTATTTGAAGCACAC
ATTTCAAGGTTTTCTAAAatcttttctttactttttaggATGGTGACTTT
GTGATACGAAACTCATCCAAAGCCGGTGTCCCATTTTCTATATCAATCTT
TCACGATAATGTTGTCCGCAATTTACAGTAAGTGTCCGAAAAAGTTTAAC
AATCGCTATTAAATGCTTTTCATTGATGTTAGGTGTATAATATTTTCTCA
ATGCAGAATTTCCTaatctaccttatcggggaaaaaaatgtcggagtttt
atttaaaaaagatcttgtaaatcgacgtttaaagcacttatttcggttaa
taaagatgtaaaaaatatagattttaattttggttggggtttaaagaatt
gggtaaaagttttggtcgggtgataaaatatcggggaaaaaattcgtagg
gggaaaatttcgtcaccccttcaaaattttcgtcacttccCCCCGACATT
TTTCCCAGATAAGGTATAGCAACGTAGGCAGAAATTTTCAAgatcaaaaa
ttgaagaaaaagatttcgcgatttctttaaaaacaataatTCTAAAGAGC
AAAACtttatggaaaaaaatataaaaggtAGAAATGTGTCCGTCCATATA
TTCTGTGAATTTTCTTACTTGATAGAAACTAGCCAAAATAggccaaaatt
acaaaattatctGCCTAAAAAGTATTGAACACAAACCGAAGATTAATTCT
TTTCCATTTATAGGCTGCTTCAAAAAGACGGTAAAATGTACTTGGGAAGT
TCTACTGAGGTAGGTCATTCATTAAACACTTATACATACTCGAAGTGACC
GGGAAGGGACTCGGTGTCATCCTCCAAATAATGTTATATGCTATGTCATG
CATGGTAACACGCTCCATATTGAGTAATATTAGCCATAAACTCtctggta
cctaatagccgggggggggaggaggttggaaaaaatctcaaaacttaata
agcggggcgttagaataaaaatgtcctaggtggaaaattttcgaaaaatt
aattagtgggggggcggctattaggtacccgagagtaagccTTAATACAA
TCACAGTAGAATTTTCTTCTGCCTAAAACAGATTTTCACCTCTTAAAAAC
CATTTATTTATCAGTCATATTTTTGATCAGCTAAGATGGATTAATGAGTT
TCTCAATAACTTTTTATTCTGCTATCTTTCAGGGGTTTGAAGGAGTACCT
GAATTGGTATCGTATCATCAGAATAACGAAATCATACTCAACACTGGTGG
TAAAGTGAAACTACTCAGGATTTGATGGCAATAGAAAATTTAGTACGCAT
TTATAAGgaagaaaaacgaaaatatttttgggtaaTGTCAGAATGGGTGA
ATCCAACCAAAGCTTTGTTGGAGCTTTTAAATTCAAGAATTCGGAAGAGA
ATTCGCCTTGTGGACTTTAAAGAGCTATTTATAAGTTCATTCAATTGCAA
CCGAAAATATGGGATCAACATTGATCACCATCATTGTTTTGGATCATTGC
TTTTTTATTAACGGAGCTTCAAGATTAATCTCCCGCCGCCTTACTAATAG
ATCTTATTGGAGTTCGGGGGTattaaaatagaaatctcttaggaattcct
cgggggaattctattgtaatactcccgaaacaattccacaatgcatcgct
tttttagaaaaatcaaaaacttcgaTAAGATCTATTTACATGGTCTCCGA
AAAAGTCAGAACACTTACAGATatagaagaaaaaaagtattttttatgGG
ATATCTATGAAAGACACTTCGGAAAGGCCGATTTAAACAATCACAAAGAC
AAACTTGGTGATAGAAAATGTTTCATATTGAACCAGAGTTGTTTTTGGTG
ATACTTAGTTAATTTCTTGTTGCTTTTTagtttagatttttttgttatgt
aaatacgaatttgattatttttctaaataattaTTGATAGATGAATAGGT
TTTCTAATGGCggataattctttttttaaatatttgtaATTATTGGTAAc
ttaaatttacagaaaaatatttttttcaaatgtttataTTAAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000718XLOC_000718Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001322-exon-sc0000010-1491911889:139247..139290TCONS_00001322-exon-sc0000010-1491911889:139247..139290Clytia hemisphaericaexon
TCONS_00001322-exon-sc0000010-1510915933:139247..139290TCONS_00001322-exon-sc0000010-1510915933:139247..139290Clytia hemisphaericaexon
TCONS_00001322-exon-sc0000010-1575043694:139247..139290TCONS_00001322-exon-sc0000010-1575043694:139247..139290Clytia hemisphaericaexon
TCONS_00001322-exon-sc0000010-1491911889:140728..140843TCONS_00001322-exon-sc0000010-1491911889:140728..140843Clytia hemisphaericaexon
TCONS_00001322-exon-sc0000010-1510915933:140728..140843TCONS_00001322-exon-sc0000010-1510915933:140728..140843Clytia hemisphaericaexon
TCONS_00001322-exon-sc0000010-1575043694:140728..140843TCONS_00001322-exon-sc0000010-1575043694:140728..140843Clytia hemisphaericaexon
TCONS_00001322-exon-sc0000010-1491911889:145789..145840TCONS_00001322-exon-sc0000010-1491911889:145789..145840Clytia hemisphaericaexon
TCONS_00001322-exon-sc0000010-1510915933:145789..145840TCONS_00001322-exon-sc0000010-1510915933:145789..145840Clytia hemisphaericaexon
TCONS_00001322-exon-sc0000010-1575043694:145789..145840TCONS_00001322-exon-sc0000010-1575043694:145789..145840Clytia hemisphaericaexon
TCONS_00001322-exon-sc0000010-1491911889:146166..147125TCONS_00001322-exon-sc0000010-1491911889:146166..147125Clytia hemisphaericaexon
TCONS_00001322-exon-sc0000010-1510915933:146166..147125TCONS_00001322-exon-sc0000010-1510915933:146166..147125Clytia hemisphaericaexon
TCONS_00001322-exon-sc0000010-1575043694:146166..147125TCONS_00001322-exon-sc0000010-1575043694:146166..147125Clytia hemisphaericaexon
TCONS_00001322-exon-sc0000010-1491911889:147920..148090TCONS_00001322-exon-sc0000010-1491911889:147920..148090Clytia hemisphaericaexon
TCONS_00001322-exon-sc0000010-1510915933:147920..148090TCONS_00001322-exon-sc0000010-1510915933:147920..148090Clytia hemisphaericaexon
TCONS_00001322-exon-sc0000010-1575043694:147920..148090TCONS_00001322-exon-sc0000010-1575043694:147920..148090Clytia hemisphaericaexon
TCONS_00001322-exon-sc0000010-1491911889:148541..148561TCONS_00001322-exon-sc0000010-1491911889:148541..148561Clytia hemisphaericaexon
TCONS_00001322-exon-sc0000010-1510915933:148541..148561TCONS_00001322-exon-sc0000010-1510915933:148541..148561Clytia hemisphaericaexon
TCONS_00001322-exon-sc0000010-1575043694:148541..148561TCONS_00001322-exon-sc0000010-1575043694:148541..148561Clytia hemisphaericaexon
TCONS_00001322-exon-sc0000010-1491911889:148845..148919TCONS_00001322-exon-sc0000010-1491911889:148845..148919Clytia hemisphaericaexon
TCONS_00001322-exon-sc0000010-1510915933:148845..148919TCONS_00001322-exon-sc0000010-1510915933:148845..148919Clytia hemisphaericaexon
TCONS_00001322-exon-sc0000010-1575043694:148845..148919TCONS_00001322-exon-sc0000010-1575043694:148845..148919Clytia hemisphaericaexon
TCONS_00001322-exon-sc0000010-1491911889:149525..149567TCONS_00001322-exon-sc0000010-1491911889:149525..149567Clytia hemisphaericaexon
TCONS_00001322-exon-sc0000010-1510915933:149525..149567TCONS_00001322-exon-sc0000010-1510915933:149525..149567Clytia hemisphaericaexon
TCONS_00001322-exon-sc0000010-1575043694:149525..149567TCONS_00001322-exon-sc0000010-1575043694:149525..149567Clytia hemisphaericaexon
TCONS_00001322-exon-sc0000010-1491911889:151931..152168TCONS_00001322-exon-sc0000010-1491911889:151931..152168Clytia hemisphaericaexon
TCONS_00001322-exon-sc0000010-1510915933:151931..152168TCONS_00001322-exon-sc0000010-1510915933:151931..152168Clytia hemisphaericaexon
TCONS_00001322-exon-sc0000010-1575043694:151931..152168TCONS_00001322-exon-sc0000010-1575043694:151931..152168Clytia hemisphaericaexon
TCONS_00001322-exon-sc0000010-1491911889:153135..153223TCONS_00001322-exon-sc0000010-1491911889:153135..153223Clytia hemisphaericaexon
TCONS_00001322-exon-sc0000010-1510915933:153135..153223TCONS_00001322-exon-sc0000010-1510915933:153135..153223Clytia hemisphaericaexon
TCONS_00001322-exon-sc0000010-1575043694:153135..153223TCONS_00001322-exon-sc0000010-1575043694:153135..153223Clytia hemisphaericaexon
TCONS_00001322-exon-sc0000010-1491911889:153810..153855TCONS_00001322-exon-sc0000010-1491911889:153810..153855Clytia hemisphaericaexon
TCONS_00001322-exon-sc0000010-1510915933:153810..153855TCONS_00001322-exon-sc0000010-1510915933:153810..153855Clytia hemisphaericaexon
TCONS_00001322-exon-sc0000010-1575043694:153810..153855TCONS_00001322-exon-sc0000010-1575043694:153810..153855Clytia hemisphaericaexon
TCONS_00001322-exon-sc0000010-1491911889:154279..155140TCONS_00001322-exon-sc0000010-1491911889:154279..155140Clytia hemisphaericaexon
TCONS_00001322-exon-sc0000010-1510915933:154279..155140TCONS_00001322-exon-sc0000010-1510915933:154279..155140Clytia hemisphaericaexon
TCONS_00001322-exon-sc0000010-1575043694:154279..155140TCONS_00001322-exon-sc0000010-1575043694:154279..155140Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000010supercontigsc0000010:139247..155140 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.04087	4.91785	16.7593	9.54854	1.8323	2.94183	2.81154	0.160332	1.67032	3.49504	1.92689	1.58444	2.4808	3.67482	0.433667	2.6798	2.66112	0.531353	0.000490841	2.56768	0.462402	1.53278	3.78142	4.65546	2.30777	4.95332	9.14906	7.29492	0.00314361	0.00178863
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00001322 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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