TCONS_00001321 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001321
Unique NameTCONS_00001321
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2719

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001321 ID=TCONS_00001321|Name=TCONS_00001321|organism=Clytia hemisphaerica|type=transcript|length=2719bp
TTTGACGACGAAGATTACGAAAATGCTGATGCAGGATTTTGTGAAGGCTC
GCCACCTCTTCAGCCACCGCTTCAGCCACCACCAAGAACATACAGTCAAA
ATGTGAACACTTTCAACAATAGTAATGATAGCATAGATGAATCCAAATCA
TACAACTATCTGtcgCAAGACGATCAAGATGATATATATGATACACCAGA
AACTGAAGAAATAGCTCGCCCACCACCTCTGCAACAGAAACCACAACGTC
CAGGAGGGTACGCACGACAACCACAACACCAAACTCCAATACCACAACAC
CAATCTCCAATACCACAACACCAATCTCCAATACCACAACACCAATCTCC
AGCAGCACACCAAGATAACTTCAATATGAGCAATAAACGCACACAAAACA
TTGATAAGCATCGTCAACAATCGTTCGCTAATAGTCGAGCAATGTTCGAA
CAGAGATCAACTTCACCTCCACAACCAGCTATCAATCGATCAGCTAAACC
ACCTGTACAACAACGTCGAAGTGATTCTAACAATAACCCGCCCTTCGCTC
CCAAACCCAATATTTCTAAGCGCCCAACGATTCCAACGCCAGCAGCGCAA
CAAAGGGTGGTACCGCCCCAACCGATCCAACTTCAAGAACCTCAACATTA
TGAAATGGATAACCAAAGCGAAGACTCGGGCTGCCATGAGGACTTTTACA
TTGAGCCGCATCAAGCCAAAAATGCCGTCATACCCCACGAAGAAGAAACG
TATGAGGTCACAGACGGGCCAACCTCCCCGGTCGAAATCATATCCTCAAA
ACCTAAAGGCATGCCTGGTCAGCAATTCATTACACAACTAAATCGAATGA
CCTTAGAAAGATCTGCTCCCTCACTTCCCGCCTCACAGAGCAAACCAATG
GCTGGAAGACCTCTCGTACCGACCCCAGATCAAGAAGAAACTTATGAAAT
CGCACCTGAGAACCCTCGTTCACCACCATTACCCGGTAACCACCCTTCAG
CCGCAAAAAGCCCCGGCATCCCATCTCGACCTTTCGTTCAGAGCCGGCCA
CCAATGCCAGTACCATCACCACCACCACAGGAAGAAGAAACCTATGAAGT
GACGCCCGATCAAGCGCCCGCTTTACCACCCTCACATCCTTCCTCGAGAA
AATCTTCAAGTACTTCGTCTATAGGGGAATCACCGAGAACGTCCATTAAA
GACAGATTACCAAATCCTCGAGATAACATACAAGAAGATTATGAGATGAT
AACTCATAGCCAAAGACCGCCTCCTCAACTTCCTATCTCTTCACGTCCAT
CTCCACCCCAACAAAGGCGCCCACCACCCTCGTTAGAACCAAAAGGTCAA
GAACCTGTATTACCTCcgCGCAACGAGAAACCGCAACGCCTTTTACCCTC
GCCTTCGCAAGAAATCAACATTCCACCCAGAACGCCAAAAATGTCACAAC
CACAAAACTCGATGCCTCCAAAGCTTATGGGAAGGCCAAGCCACCCAGCT
TTCCAACAAGCAACGATGAGTTTAGATCGAAGCAAGGATACTTGTCCTCA
ACCTACCATAGAACGTATACCATCGTACAAAAAGCAAACACAATCTGCAA
ATGCACCAACGCCTATCAATAGACAAACGCCTGCTCCCGCCCATCCGTTA
TCTGGTTTCACCTGGTTCCAACCGGAGCTTGATCGTAGAGCGTGCgaaat
taaattgaaccaaaacagaAGGgATGGTGACTTTGTGATACGAAACTCAT
CCAAAGCCGGTGTCCCATTTTCTATATCAATCTTTCACGATAATGTTGTC
CGCAATTTACAGCTGCTTCAAAAAGACGGTAAAATGTACTTGGGAAGTTC
TACTGAGGGGTTTGAAGGAGTACCTGAATTGGTATCGTATCATCAGAATA
ACGAAATCATACTCAACACTGGTGGTAAAGTGAAACTACTCAGGATTTGA
TGGCAATAGAAAATTTAGTACGCATTTATAAGgaagaaaaacgaaaatat
ttttgggtaaTGTCAGAATGGGTGAATCCAACCAAAGCTTTGTTGGAGCT
TTTAAATTCAAGAATTCGGAAGAGAATTCGCCTTGTGGACTTTAAAGAGC
TATTTATAAGTTCATTCAATTGCAACCGAAAATATGGGATCAACATTGAT
CACCATCATTGTTTTGGATCATTGCTTTTTTATTAACGGAGCTTCAAGAT
TAATCTCCCGCCGCCTTACTAATAGATCTTATTGGAGTTCGGGGGTatta
aaatagaaatctcttaggaattcctcgggggaattctattgtaatactcc
cgaaacaattccacaatgcatcgcttttttagaaaaatcaaaaacttcga
TAAGATCTATTTACATGGTCTCCGAAAAAGTCAGAACACTTACAGATata
gaagaaaaaaagtattttttatgGGATATCTATGAAAGACACTTCGGAAA
GGCCGATTTAAACAATCACAAAGACAAACTTGGTGATAGAAAATGTTTCA
TATTGAACCAGAGTTGTTTTTGGTGATACTTAGTTAATTTCTTGTTGCTT
TTTagtttagatttttttgttatgtaaatacgaatttgattatttttcta
aataattaTTGATAGATGAATAGGTTTTCTAATGGCggataattcttttt
ttaaatatttgtaATTATTGGTAActtaaatttacagaaaaatatttttt
tcaaatgtttataTTAAAA
Run BLAST on NCBI

transcript from alignment at sc0000010:139245..155140+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001321 ID=TCONS_00001321|Name=TCONS_00001321|organism=Clytia hemisphaerica|type=transcript|length=15896bp|location=Sequence derived from alignment at sc0000010:139245..155140+ (Clytia hemisphaerica)
TTTGACGACGAAGATTACGAAAATGCTGATGCAGGATTTTGTGAAGGTAG TAACAATCGAGTATTATATATGTCAAAGTATCGTACTCTAGAGATTCACT ATTTCACGGCTCGACTATTTATTCCTTAAAGATTAGAATGAATTGTACGG AACATTAGAAGGAGCGGGGATCCGAATCGCGAATCCCTGGTTcgagacgc tgacgcctttgaccacttagCCATCACTCCATAATTGCTCTATTTTGACT GACCATTTGATACAATGGTTTTTCGAAATGAACTTTCAATTGTAGTAACT GTATTTCTCTCAGCTTCTTGTAAATGTTTACGAATTTTTAGAAAGAAGAG AGGAACGATAAATATGATAGCAATTAGAAACTTTGGTAATCATATTTATG GGACTGTTGCTGTAAGGTTAATCTTTTTTGTCAAGTTGTGTACAGAAGAT AACCTGTGTTAAATTTACTGTGTTAATTTTGTTGCGCaatctaaaatttt tctctTGATTAATTTTTAGGCTCGCCACCTCTTCAGCCACCGCTTCAGCC ACCACCAAGAACATACAGTCAAAATGTGAACACTTTCAACAATAGTAATG ATAGCATAGATGAATCCAAATCATACAACTATCTGGTAGGTTATTTTGTC AACAGTTTTTGTACGACTTTTTACACGTGAACTTATATTTTGTATGCCCG AACATAATTTTGTTCGCTTACTATTTCTTTGGTGATAATTGCATTTAGGT ATTGGGTAACCCTTAAAACCCTTCCTCTGCTTATACTAAAAAGTCCTgtt caatgtgaaaaagatgTTGGACTTTGACTTGGTTTTCTTGAGTGTCTACA TTGATCGAGCCTAGTGTATAACTTCATAGAGCCCCCCCCCCNTGAGGATA TTTACGGAAATTCGTAACTTGAATACGTGACCGACCCTCCAtattttccc tcttttttttaCAGTTTGACGACGAAGATTACGAAAATGCTGATGCAGGA TTTTGTGAAGGTAGTAACAATCGAGTATTATATATGTCAAAGTATCGTAC TCTAGAGATTCACTATTTCACGGCTCGACTATTTATTCCTTAAAGATTAG AATGAATTGTACGGAACATTAGAAGGAGCGGGGATCCGAATCGCGAATCC CTGGTTcgagacgctgacgcctttgaccacttagCCATCACTCCATAATT GCTCTATTTTGACTGACCATTTGATACAATGGTTTTTCGAAATGAACTTT CAATTGTAGTAACTGTATTTCTCTCAGCTTCTTGTAAATGTTTACGAATT TTTAGAAAGAAGAGAGGAACGATAAATATGATAGCAATTAGAAACTTTGG TAATCATATTTATGGGACTGTTGCTGTAAGGTTAATCTTTTTTGTCAAGT TGTGTACAGAAGATAACCTGTGTTAAATTTACTGTGTTAATTTTGTTGCG CaatctaaaatttttctctTGATTAATTTTTAGGCTCGCCACCTCTTCAG CCACCGCTTCAGCCACCACCAAGAACATACAGTCAAAATGTGAACACTTT CAACAATAGTAATGATAGCATAGATGAATCCAAATCATACAACTATCTGG TAGGTTATTTTGTCAACAGTTTTTGTACGACTTTTTACACGTGAACTTAT ATTTTGTATGCCCGAACATAATTTTGTTCGCTTACTATTTCTTTGGTGAT AATTGCATTTAGGTATTGGGTAACCCTTAAAACCCTTCCTCTGCTTATAC TAAAAAGTCCTgttcaatgtgaaaaagatgTTGGACTTTGACTTGGTTTT CTTGAGTGTCTACATTGATCGAGCCTAGTGTATAACTTCatagagccccc ccccccagcggttttcatgatggcgtgattggtGTGTGATCAGAGGAACC AACGTGATCATTatagaaaggaaatttaactTGTGATTGTgtgatttgaa aggtgactgggGGCCTCTTCATACAGTTCAACTCCTGATTCAGACAAACA TAGATTTTATATCATGATATTGCAATGCTCCTAAGTAATTTAAAATggtt ttaaaagtgttttttgtTCACACGGTATCGGTTTGCAGCACCTCATTTTA CGAAGTTCtgatatttgttttttataagtaaTCAAATGTAACTTATCATT CAGGACTAGGATTACCCCCAGTACCAAACAAGATAGGATCGGCTTACATA GTTTTAACACGGGGAATTTCGGCTGTGTGAAGCCATCAAAGTTCCATTTA TAAAGTGCGAGATCCAGTTGAGAAAATctacatattggaaaaggtcttTT CGGGGAAAATGTTTTGAAGTTTTGGGGGTTTCTTTTCCTTGTAAGACTGA TATGATAGTGACTAAAATTCAACGAATTTAACCCATGGGAAAATGAAAGT AACAAACATTTTTGGAGAACTCAAAGTCTGTTAAAAAATTAGTATGCTCC AatatgatattttgaattttttcggTCAAGTAAAAAAGGTCAGGGGGATT ATTTTGGGGAATTACTTAAAAAATGCCATGCAGTATTTGAAAGAGAAATT GCTTTATATGATATACTTTCTTAAACAAATACCTTTGCATCAATTATCGT GTTTAGATTAAAAAATTTGTGTGTACAGTACGTCaacattttgagaaatt caaaGTACACGATTtattagtctacacaatagacagatacaggcttttag gccttactcttgttCTATAGGCACTgatataggcggccactagtgaaccc caccgggaattgcttattaataggtttaaacataatagacaacattcaca aaagatgtttatcaatagagattttaaataaaagaatgtttaaaacacag NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACGATTTATTAACAG GACTAAACACGTCtctttgtttttaatgtttatcTTGTTGTCGAAATCGG tgaatcatttttctttttgtatacACAGGGCATCCCCTCTCATTAATTTT CTCGTCTTTTTTGATCGAACTTGTATCATATAAGTGTTTATACGCTTGAT GATTGAAATctatgtttaaagattttttactgctgaaagtttaaaaagga agtTTTTTAGGGAAGGctgtttaaggctttttgaggattttttaaaaagg tttttggGGATTTTGGAAACAAGCCTTAGAATTATTCAAAAATGTATGAA GCCTTCCCTATGGTAAGTGATATTTTGCTTTGAATTCTTGAAATTATAAT CTTAAATCTCTTTTTAGCAGGGGGGGTGTCGGTACTAAAACccaagacat atatgagtactacaaggttttttgacgatttttgacataccctcacctaa tttttgaaaaaggaattttagtacacatgtactgaaatttatttttacat tttagcaTAGTGACCACCTAAATAAGGCTTATTTTGGAATTCGGTTCGAA GAATGTGGGTCTttggactttcaacaaaatgccAACTCTGGTTATTTAAG CTGTCAATGAACCTGATATATCTCTATCTATTCTAGATAAAGACTCAGAA ACAGTCAAGACACTTTTGCCCTGCTCTACTTTAGTTATTGCAAAGATTGA TGGGTTATTTTTCACCTCTAATTTACAGAggaacctttttcctcagttga gataaaaatttcctattgaaatattaatggggatacaaattctattgttc caaggttaaaaacccagtggggatatgattttggagtgcaatttttacac atggaattttgagtggggatgaaatcaaagtcaatttcccagtagggctg aaattcaagggtattctaccaccggggacaaaatttttgcttaatttgtg acacagggacgtatttaaatcttatatagagagtttttattttttcattt tgcctaaaatgctcAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNtagttaaatttcctaaaatttggtgatttttagtact catgtattaaaatttttcttaaatttcttgaagacccccacctaatttgg gattttagtacacatggtactaaaatgcttttaggctttttttgtaatac caccacgtcactaaaagtcatgatgtctgaaattttagtaccgacccccc cccctctttttaGCTAAATTTATAGTTTTTCACACAAAGACtataagctc tagtttagacggccgactttctgccctgtctattctaattgttagagtag gcagaagtTGGGCAAAAAGTTGGCAGctaaagacattgcattgacgtcaa aagagggcgatgcattgactttagacggcccactttatgcccactttgat tcacaattagaatagacagggcaaaaagtgggctgtctaaactagagcta agctCGTCTGAAAGGGTAAAAGAAAATTGTCAATACTTTGTATGTATTGT CAGTACCTGGTAACTTTCAGTTTCGGAAATTTTCAATGTCATTATTAAGT ATTCTACTCATTTTATCTTGAATTTGGTCACAACTTTCATTTAGTATTGG CGTCATAAATGAGGTATTATTTCCTTGAAAGTTTGTGAGAGATCTATGGG CCTGTGTCAAAAAATGTTGCCTTTGAAGTAGGTTTAAAGCATTTTGTACA TTTACGACGAATCTTTGTTAAAAAACAATAGGccgcaaaattaaacacct tttttgacaacaaataatatgcccataacttttgatctagagaagttggg attTTGAtgcaatacacttttttgctcagtttgaagagttCTTACGTAGT ATAGGTcttctttgattttgaagacccccaaaaatcatgaattttctgac ctttcaattttgtttggaaacgcaaaaaatcgaaaattatgcAAAAACTG CAGTTTTTCAAggttggtaacattcaaattccgaatcagcaccctcaaat tgaccaaaatcaatCATGAaaggacattttgaaaaaaagtgaaacgtttt ggtGGCACTGCACTGGCCTACAAGTTTCCATTTCAATAGAGGGAAAGGTA ATGATGTTTATCTCTAAGCAATTATAAATGAACGATCTTAAAGCAGTAAA TTGCTTTTATAAATGGTTTTGAAATTAGCTAACCGCGTCTTCTGAAATGA TTTCTATTAACTTAAATTAAGTTTTGGCTCCTATGTCATATGATACGTTT CGTTTAAAAGAACATAGGCGGACAGTTTTATCATGAAATTTAAATTGATA GAGATATTGTTAAGTAATCTGGTCTATTGAAAACAACTTTTTAGCGTTCA TTATCTGTAGAAAATAGATTGTAATCAAAGTCACAGCTTaggttgtctgt acacagacccgatatctacggctaatttcaaaaattcatttccgtagaca aacgtgagatacactctggtacagagtacagCTTAGGGATCTGGATATTA CTTTTGCTTTTTGCGTTTTGTTCCTATTTCGAATTTAATCAGGTATAGAT ATTCTGTGATTGAAATATCTCAATTCTGCCCAATTTAGTAACTATTACTG CTACTTTAATCATATAGCTTTCGTGcttaatatttttggaaaatagtttT GGAAGCCCTAGCGAATTTATTGTATTGTGTTAGCATCTTGAAGACATGGT TTTATGGGATTTGATTGTCTCAATTCTGCTATAATTTAGTAAAAAATTTA CTTCAATATACTTCACTCGTATAGCTTTTGTGCTCAATGTTTTATGtagg aatacacgtttttttataagaacaaactatataagaacataaggcttcac tggccaaaatgttaagagcaagttaagaacattttaaggctttgtggact caaaaccacccaatttcttaggaaaatagtcaaaattattcacaaaatgg tcaaaataagaacatgttcagaacaattttaggcttaaaactcaaaaagt tcagaacattcaaggcttcaaaaaatttggatgtttttataaaaaaaacg cgtAGTCCTGGTAACCCTAGCAAATTTACTTGTATTTTCTCAATATCTTT ACTttccttttctttatttttcatttatcacatttttttttcagtcgCAA GACGATCAAGATGATATATATGATACACCAGAAACTGAAGAAATAGGTTG GTGTATTTGTATTTAAAGTTCTTGACTAGCATAATTGAATGTCCAAGTTA TTTTGTGACCAGCCAAAAGTATAGTTTTttattctgtttgttttttttat acaaGTTCGTCAAAATTAGACGATATGTGGCGACTAGGACAGAAATAATT TGATATTGAACGAAAACAACTATGATGATCAGTTAATcatggaaaaattt taaaccccaGATCAAAATATTATTCAGGAATATTATTACAGTCTTGGTCA ACTTAATGTATACACCGAATGTCAAAGTTTGAAACAGTCCATTTTTCATA CTTTCGATTCAACTTTTACAGCTCGCCCACCACCTCTGCAACAGAAACCA CAACGTCCAGGAGGGTACGCACGACAACCACAACACCAAACTCCAATACC ACAACACCAATCTCCAATACCACAACACCAATCTCCAATACCACAACACC AATCTCCAGCAGCACACCAAGATAACTTCAATATGAGCAATAAACGCACA CAAAACATTGATAAGCATCGTCAACAATCGTTCGCTAATAGTCGAGCAAT GTTCGAACAGAGATCAACTTCACCTCCACAACCAGCTATCAATCGATCAG CTAAACCACCTGTACAACAACGTCGAAGTGATTCTAACAATAACCCGCCC TTCGCTCCCAAACCCAATATTTCTAAGCGCCCAACGATTCCAACGCCAGC AGCGCAACAAAGGGTGGTACCGCCCCAACCGATCCAACTTCAAGAACCTC AACATTATGAAATGGATAACCAAAGCGAAGACTCGGGCTGCCATGAGGAC TTTTACATTGAGCCGCATCAAGCCAAAAATGCCGTCATACCCCACGAAGA AGAAACGTATGAGGTCACAGACGGGCCAACCTCCCCGGTCGAAATCATAT CCTCAAAACCTAAAGGCATGCCTGGTCAGCAATTCATTACACAACTAAAT CGAATGACCTTAGAAAGATCTGCTCCCTCACTTCCCGCCTCACAGAGCAA ACCAATGGCTGGAAGACCTCTCGTACCGACCCCAGATCAAGAAGAAACTT ATGAAATCGCACCTGAGAACCCTCGTTCACCACCATTACCCGGTAACCAC CCTTCAGCCGCAAAAAGCCCCGGCATCCCATCTCGACCTTTCGTTCAGAG CCGGCCACCAATGCCAGTACCATCACCACCACCACAGGAAGAAGAAACCT ATGAAGTGACGCCCGATCAAGCGCCCGCTTTACCACCCTCACATCCTTCC TCGAGAAAATCTTCAAGTACTTCGTCTATAGGTaagtaaaagagaaaaaa atttgccaGCCTGGTGATCTTTCTGGTTACTGTGAACATCACAGTTTGGT TTTTTCTGAAATTNAATTTGCCAACCTGGTGATCTTTCTGGTTACTGTGA ACATCACAGTTtggttttttctgaaatttaacCTTGTGAGGACGGACAAT TTTATCGCGTATGTCTCATCACATTTCTGATCATATAATGGAGAGCACGT ATCCTCGTGTTATGTTCTAGCAGGTTACATCTTTATATATGTGAAAAAGT AAGAATTTCTCTCcgactatattcactcaggagatttgggtggcagagca gcatatgcatttcgtccttattgaGACTCATCCATCAGATATATATCTAT CAGTGAATTGAGTTTCCTTCAAAAGAACTCCTATCTTGTGATTTGATTGA TTAAGCCTTCATCAAAAATATCCTGGATAATAATTGTGGCGTGCAACTTA GTGTCCGGTATCACAGCCTGCAGTTTCATTTCTCGTCTAATTTGGaacta gcctagttaactaagcctgtattcacaaggctaggataCACCGCTAATGG CAATATAGcattttcggcgctttaaagattttttatatttacggatttta tgtttgccttggaatactggtAATTCAGTTACAagttaccatcagattta tcctagtgactgaatcaaaccaGTTTAGATTTCTAGGCTTATTTGGAGCT AGGTGGTAATAATATCTAAGCAGGTCATAAACTATTCGATTCATTCTACC ATCATCTATCTTCTAATACCTACAGGGGAATCACCGAGAACGTCCATTAA AGACAGATTACCAAATCCTCGAGATAACATACAAGAAGATTATGAGATGA TAACTCATAGCCAAAGACCGCCTCCTCAACTTCCTATCTCTTCACGTCCA TCTCCACCCCAACAAAGGCGCCCACCACCCTCGTTAGAACCAAAAGGTAA TGATCATTCTTCTCgttgaatttctttttgtacTTGCAGGTGTGTAGCAA CTTATTCACATTCTTTACCAAGTAGGATGTTTAGGACATTCATTATATTC CAGATTTTTCCacgaaaaagttgattttgtattggaaatccaggagttac aaaaaacattttacctTAGAAATCCGCtatcgtccaccccctgtatgctG TTTCTCAACAGCATTTCttcaactcaaaatttcagaaaaaaaacttttat ccaCTGACATTggaattatttttctaaaatttaaagtGAATTTTCGTGAG GGGTATTGAAACTCTAGAAACTATGATCATTAATATTTTGGGGAATGAAA AATAGGATTCTGTTGATATGTTGATTCTTTGTATACAAAGAGAAAACACA AGTTGACATGCATGATAtcgttaatatttttttgttgctttttaagGTCA AGAACCTGTATTACCTCGTAAgcataaatatttatatttcattattttgt aaGCTAAGTCGAGTCTTCATGGTCCCTTACttataaagattttgttttaa aaaaaaactacgaACGAGGGGGGGggatttaaaactttctgatagTTGGT CTTTTATTTTAGCTAGAAAACTTGAGCTTTTGGAAGCCGAAGATAGTGAT CTGATGACCCCTGATGCTGTATTGTGCTCCAAAGAACTTAATATTTCCTT TTCAGCCaaacatattttcaatatatccttcaaaatatttttcatttcag cgCGCAACGAGAAACCGCAACGCCTTTTACCCTCGCCTTCGCAAGAAATC AACATTCCACCCAGAACGCCAAAAAGTAAGTCAACTCGTTATATGCACCA TAGCAATGTCTTTCACGGACCCaacatctgattggttgaaattgacgtat tgactgaatttaccaatcagctattggttccgtgatgtaatatcagaaga cattgcaatggtgcatgtAATGAATAGGGTGTGTTTATAATTGATTGGTA TTTTAAAGACAGGGATATCAATACGCTAACGAAGTTTTTTCTCTGTTGCC ATCTTCTGCTCGAGAGAAAGATTCAAAGAAATTGTGTTTTATCTTTGAGA CTTTCTGATCTGAAGGTACCAAACTTCACACTACTGATTGTATTATATGC TGCAATTAAAACCATTGTATAACAAAAACCCTCGACACAAGATTACCTAC GAACCAGATTTTGCCAATTCTTTGGGGCGCACATGGTttatacccagctg gcacacaacgttgtttcaacgttcatctaacgttatatggacgctgtgaa cgttagataaacgtcgaaaaaacgttatgtgccagctggatAGTAAATAC TCTTGAATGATAAGTGAGGGTAATAAATTGTTGGCAATAGATAAATTGGA ACATCATGTCTTGTTTCTTTTTCCATACAGTGTCACAACCACAAAACTCG ATGCCTCCAAAGCTTATGGGAAGGTAAGCAAAATACTGGGTTTTTGAAAC TTTGCGTTTGTTCATGGTTCCTTTAGGTACGACATTTACATAGTTCAGGT GGAAAGCTTTCACGTAACTTTTCGCGAGGttgaaaattcgcgaaaattat tAAATAAGTTTTCGTAAAATAAAAGGAGTATGGAAGTCTCTAAGCCATAA CGACGTATAATTTGCTGAGATCACCatgtttgaatgaaaaagactttgta gtattattttttgaaaaatacggAGTTAAAAGACAGACCATGtcgtgatt ttctaaaaaagataatTTGTATGTCTTAAACGTAAAACTTTTGAGATAGA TGATGAGTGGCCTAAATAATTATTGTCACGAAGTAGAGCCTTTGCTGAGT ACTTTTTCTGTCTCGTTTTTGATGCTCTAAGGATGGTTACTTCCTCGACT TAATGACTATTACTGGGACTTAAACGTCCTTAGAGATTTTGGAAATTTGG TCTATCAGAATGTTCCTCGTTCTTTTTTACCCTAATTGAGTCCGGCTGTC CGGTGCGTTTTCTTTTTAATCGTTTTctttcactgacctttatatatccc tggaccaagttactcaagcaaaatattatgatcggagtttttttgaaatt ggtacccgtgGAGAGGGCGCTAGATCTAGTTTTGCTTGTACATTAATGAT GTATCATCGTTTGTCGTAAGGCAAAGTctcaaacactacaatggcttctt tgagggtaccaactttcaaaaacttcgatcaaaggtGGCGGATATTGCTT GGttcagggatatataaaggtcagtgttttCTATACAAAAAAATGTAAGG TATCATTTTTATGCAATGAGATCTGCAATATCCATCTGTGTCTCTTACCC CCGTGACTTACTACCATTGCAGTCTACCTACATTCAGTCTAAGCAACAGC TGGCTCGAAGATGTCAAGTGCGGACAAAGGAAAACCAGCCTCGATATGGG TGCCATAAGTCCGAAATTATTTCGTCGTATAAATGACCGTCGTTCAAGCT TATCTGCCGATGAAATTCAAGTCAATCACTCAACTGCATGTGTCTTAGGG TAGGATGATATGATAAATCAACATtgactaaaaaagaaaacatgacaCAC AAAGAGACATGGCGTGACAGTTGAGTTCCGGACAAATATAATAGGCTTAC TGTAATCCGTTTCCAGTACAGTGTGTCCCGAATAAAGTTATCAAGAAAAT CTTGGCAAAATCAATCAACTCGTTGGCATATTACCGGGTGTGTCAGAAAT AAGTTACcctttttgatttgatattgtaggcTTTTCGCCTTTTCTgacaa tttttaaaattgacattttaggtttttaaacataacttttgaacccatga agtaaaattaaaaagtaatacaccaaattttaagttaggctttcctctgt ATGATtcagaaacttttgaaaaacctCTCAACTACTGACaacaatattaa attaaaaaaggATAACTAATTTCTGGAACACCCGGTAGTTTAAAAAGATA TTTCGATTCATTCCTAGAACAAACAACTAAATACAAGCCAGTTGTAAATC GTTAACCCTCATACTGTGATGGAGGATTTTTCATATACTAAAAACTGACC TCTTGATTCGGGACATGCTGTAAATTGCATGTTAACATGGAAATAACTGA ACAATCAATGTTCATCAAGGATGTGAGACTTTCAATAATGTTGAAACTGG TGACGGactaaaattctgaaaataaaatgcaaaaaaaaaaaatacattag TTTACNAGACTAaaattctgaagaaaaaaaatgcaaaaaaaaaaatacat tagTTTACTTTCGACGAGTAGATTTGCTTCTTTACTTGTTCGTGAAaata aatttcgcgaaattgaatgaaatggaaatttttaaagttttgttttcGAC GTTTTGTAACTCCGAACGTTTTAGTTTTGGCGAAAGCTTGACAtcttttg gaccattttcagttgatttaaGGCCTTCTAGGAAAATACATCAACGCGAA ACGTTTCAAAATATTGACTTAATAATGGAAATAAATCGAGAAATTTGTCT CGCAGAATTGAACCTtgtgaaaattaatccaattaaagcaCACTGACAAA GAACAGTTTAAACAATGAAATATTGATGATTTTGACGAACATTACCTTAA CATAACCAATGACATACGAAATATCGActttacaaaatagaaatactTAA CCACTCATACGCGTACAAAGTTATTCTAAATGAGACCTTCAATCTGTTAC TTTTTTATGGAATTGTTCATTTAATATTTTAGCAAATTAATTATCAGACA TTTTCTAGATACAGTTTTCCTTCCTTTTTGAAACAGGCCAAGCCACCCAG CTTTCCAACAAGCAACGATGAGTTTAGATCGAAGCAAGGATACTTGTCCT CAACCTACCATAGAACGTATACCATCGTACAAAAAGCAAACACAATCTGC AAATGCACCAACGCCTATCAATAGACAAACGCCTGCTCCCGCCCATCCGT TATCTGGTTTCACCTGGTTCCAACCGGAGCTTGATCGTAGAGCGTGCgaa attaaattgaaccaaaacagaAGGGTGAGTACGTCTACGTTTAGGATACT GTTCGCCCCTTGAGGTACTCTGCACCAGaatgtatctcacgtttatcgct tcgtagtacactctgtgcgcattgtctgtttgataaaaaaattcccgtat ggagacctctgcgatgaagtatgatttatataaatagcaacacttctctc gtcttctccccctctctcaccaacactccatcgcagcggtcggtttgaaa aatctcaaatgagaaaaggcaatgacaacagaccctctacggcaatgaat tttgaaattagtcgtagatactgggtctgtgtacaggcAAACTTTGAGGG AGTCAAAGGTTATTTCTCTCTGCTACTCGAGATGTTCAATGGCTCGAACG ATCACTGTCTACTTCTTGGTGTTTAAAGTTATTGTGACTTAAAAGTATTC CTAAAAGAAGCAAGGTGATTTTCCCCTGAATAAACCTTGACTAAAATTGG AAATTATGTTCATTTGAAACTCATATGAATCCTTTTGTGTTTGTTATTTC GTAGTATTTTCAAGTCAATCTCGTTGAATTGCCTGAAGGCTGCAAtacaa cgctttttttataataatacactttataagaatgtccatgataaaaatgg ccaaaaaattaaggataatgctaagaatatcaccatcatggaattttgct actcagctaagaatgacatttttagagcattttcaattataaattgccaa ttacccccaagtaaggctcactcctttcacaaaaatgccattttatgctt gagacgtatgtactaaatgtcaaatctagtctgaattaggattctaacct aagaataatgtaagaatattttaggatgatttttttaagaaaatccatga taaaatggatttacaccattcttatgaaAATAAGCGTGTATTTGAAGCAC ACATTTCAAGGTTTTCTAAAatcttttctttactttttaggATGGTGACT TTGTGATACGAAACTCATCCAAAGCCGGTGTCCCATTTTCTATATCAATC TTTCACGATAATGTTGTCCGCAATTTACAGTAAGTGTCCGAAAAAGTTTA ACAATCGCTATTAAATGCTTTTCATTGATGTTAGGTGTATAATATTTTCT CAATGCAGAATTTCCTaatctaccttatcggggaaaaaaatgtcggagtt ttatttaaaaaagatcttgtaaatcgacgtttaaagcacttatttcggtt aataaagatgtaaaaaatatagattttaattttggttggggtttaaagaa ttgggtaaaagttttggtcgggtgataaaatatcggggaaaaaattcgta gggggaaaatttcgtcaccccttcaaaattttcgtcacttccCCCCGACA TTTTTCCCAGATAAGGTATAGCAACGTAGGCAGAAATTTTCAAgatcaaa aattgaagaaaaagatttcgcgatttctttaaaaacaataatTCTAAAGA GCAAAACtttatggaaaaaaatataaaaggtAGAAATGTGTCCGTCCATA TATTCTGTGAATTTTCTTACTTGATAGAAACTAGCCAAAATAggccaaaa ttacaaaattatctGCCTAAAAAGTATTGAACACAAACCGAAGATTAATT CTTTTCCATTTATAGGCTGCTTCAAAAAGACGGTAAAATGTACTTGGGAA GTTCTACTGAGGTAGGTCATTCATTAAACACTTATACATACTCGAAGTGA CCGGGAAGGGACTCGGTGTCATCCTCCAAATAATGTTATATGCTATGTCA TGCATGGTAACACGCTCCATATTGAGTAATATTAGCCATAAACTCtctgg tacctaatagccgggggggggaggaggttggaaaaaatctcaaaacttaa taagcggggcgttagaataaaaatgtcctaggtggaaaattttcgaaaaa ttaattagtgggggggcggctattaggtacccgagagtaagccTTAATAC AATCACAGTAGAATTTTCTTCTGCCTAAAACAGATTTTCACCTCTTAAAA ACCATTTATTTATCAGTCATATTTTTGATCAGCTAAGATGGATTAATGAG TTTCTCAATAACTTTTTATTCTGCTATCTTTCAGGGGTTTGAAGGAGTAC CTGAATTGGTATCGTATCATCAGAATAACGAAATCATACTCAACACTGGT GGTAAAGTGAAACTACTCAGGATTTGATGGCAATAGAAAATTTAGTACGC ATTTATAAGgaagaaaaacgaaaatatttttgggtaaTGTCAGAATGGGT GAATCCAACCAAAGCTTTGTTGGAGCTTTTAAATTCAAGAATTCGGAAGA GAATTCGCCTTGTGGACTTTAAAGAGCTATTTATAAGTTCATTCAATTGC AACCGAAAATATGGGATCAACATTGATCACCATCATTGTTTTGGATCATT GCTTTTTTATTAACGGAGCTTCAAGATTAATCTCCCGCCGCCTTACTAAT AGATCTTATTGGAGTTCGGGGGTattaaaatagaaatctcttaggaattc ctcgggggaattctattgtaatactcccgaaacaattccacaatgcatcg cttttttagaaaaatcaaaaacttcgaTAAGATCTATTTACATGGTCTCC GAAAAAGTCAGAACACTTACAGATatagaagaaaaaaagtattttttatg GGATATCTATGAAAGACACTTCGGAAAGGCCGATTTAAACAATCACAAAG ACAAACTTGGTGATAGAAAATGTTTCATATTGAACCAGAGTTGTTTTTGG TGATACTTAGTTAATTTCTTGTTGCTTTTTagtttagatttttttgttat gtaaatacgaatttgattatttttctaaataattaTTGATAGATGAATAG GTTTTCTAATGGCggataattctttttttaaatatttgtaATTATTGGTA ActtaaatttacagaaaaatatttttttcaaatgtttataTTAAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000718XLOC_000718Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001321-exon-sc0000010-1491911889:139245..139290TCONS_00001321-exon-sc0000010-1491911889:139245..139290Clytia hemisphaericaexon
TCONS_00001321-exon-sc0000010-1510915933:139245..139290TCONS_00001321-exon-sc0000010-1510915933:139245..139290Clytia hemisphaericaexon
TCONS_00001321-exon-sc0000010-1575043694:139245..139290TCONS_00001321-exon-sc0000010-1575043694:139245..139290Clytia hemisphaericaexon
TCONS_00001321-exon-sc0000010-1491911889:139764..139879TCONS_00001321-exon-sc0000010-1491911889:139764..139879Clytia hemisphaericaexon
TCONS_00001321-exon-sc0000010-1510915933:139764..139879TCONS_00001321-exon-sc0000010-1510915933:139764..139879Clytia hemisphaericaexon
TCONS_00001321-exon-sc0000010-1575043694:139764..139879TCONS_00001321-exon-sc0000010-1575043694:139764..139879Clytia hemisphaericaexon
TCONS_00001321-exon-sc0000010-1491911889:145789..145840TCONS_00001321-exon-sc0000010-1491911889:145789..145840Clytia hemisphaericaexon
TCONS_00001321-exon-sc0000010-1510915933:145789..145840TCONS_00001321-exon-sc0000010-1510915933:145789..145840Clytia hemisphaericaexon
TCONS_00001321-exon-sc0000010-1575043694:145789..145840TCONS_00001321-exon-sc0000010-1575043694:145789..145840Clytia hemisphaericaexon
TCONS_00001321-exon-sc0000010-1491911889:146166..147125TCONS_00001321-exon-sc0000010-1491911889:146166..147125Clytia hemisphaericaexon
TCONS_00001321-exon-sc0000010-1510915933:146166..147125TCONS_00001321-exon-sc0000010-1510915933:146166..147125Clytia hemisphaericaexon
TCONS_00001321-exon-sc0000010-1575043694:146166..147125TCONS_00001321-exon-sc0000010-1575043694:146166..147125Clytia hemisphaericaexon
TCONS_00001321-exon-sc0000010-1491911889:147920..148090TCONS_00001321-exon-sc0000010-1491911889:147920..148090Clytia hemisphaericaexon
TCONS_00001321-exon-sc0000010-1510915933:147920..148090TCONS_00001321-exon-sc0000010-1510915933:147920..148090Clytia hemisphaericaexon
TCONS_00001321-exon-sc0000010-1575043694:147920..148090TCONS_00001321-exon-sc0000010-1575043694:147920..148090Clytia hemisphaericaexon
TCONS_00001321-exon-sc0000010-1491911889:148541..148561TCONS_00001321-exon-sc0000010-1491911889:148541..148561Clytia hemisphaericaexon
TCONS_00001321-exon-sc0000010-1510915933:148541..148561TCONS_00001321-exon-sc0000010-1510915933:148541..148561Clytia hemisphaericaexon
TCONS_00001321-exon-sc0000010-1575043694:148541..148561TCONS_00001321-exon-sc0000010-1575043694:148541..148561Clytia hemisphaericaexon
TCONS_00001321-exon-sc0000010-1491911889:148845..148919TCONS_00001321-exon-sc0000010-1491911889:148845..148919Clytia hemisphaericaexon
TCONS_00001321-exon-sc0000010-1510915933:148845..148919TCONS_00001321-exon-sc0000010-1510915933:148845..148919Clytia hemisphaericaexon
TCONS_00001321-exon-sc0000010-1575043694:148845..148919TCONS_00001321-exon-sc0000010-1575043694:148845..148919Clytia hemisphaericaexon
TCONS_00001321-exon-sc0000010-1491911889:149525..149567TCONS_00001321-exon-sc0000010-1491911889:149525..149567Clytia hemisphaericaexon
TCONS_00001321-exon-sc0000010-1510915933:149525..149567TCONS_00001321-exon-sc0000010-1510915933:149525..149567Clytia hemisphaericaexon
TCONS_00001321-exon-sc0000010-1575043694:149525..149567TCONS_00001321-exon-sc0000010-1575043694:149525..149567Clytia hemisphaericaexon
TCONS_00001321-exon-sc0000010-1491911889:151931..152168TCONS_00001321-exon-sc0000010-1491911889:151931..152168Clytia hemisphaericaexon
TCONS_00001321-exon-sc0000010-1510915933:151931..152168TCONS_00001321-exon-sc0000010-1510915933:151931..152168Clytia hemisphaericaexon
TCONS_00001321-exon-sc0000010-1575043694:151931..152168TCONS_00001321-exon-sc0000010-1575043694:151931..152168Clytia hemisphaericaexon
TCONS_00001321-exon-sc0000010-1491911889:153135..153223TCONS_00001321-exon-sc0000010-1491911889:153135..153223Clytia hemisphaericaexon
TCONS_00001321-exon-sc0000010-1510915933:153135..153223TCONS_00001321-exon-sc0000010-1510915933:153135..153223Clytia hemisphaericaexon
TCONS_00001321-exon-sc0000010-1575043694:153135..153223TCONS_00001321-exon-sc0000010-1575043694:153135..153223Clytia hemisphaericaexon
TCONS_00001321-exon-sc0000010-1491911889:153810..153855TCONS_00001321-exon-sc0000010-1491911889:153810..153855Clytia hemisphaericaexon
TCONS_00001321-exon-sc0000010-1510915933:153810..153855TCONS_00001321-exon-sc0000010-1510915933:153810..153855Clytia hemisphaericaexon
TCONS_00001321-exon-sc0000010-1575043694:153810..153855TCONS_00001321-exon-sc0000010-1575043694:153810..153855Clytia hemisphaericaexon
TCONS_00001321-exon-sc0000010-1491911889:154279..155140TCONS_00001321-exon-sc0000010-1491911889:154279..155140Clytia hemisphaericaexon
TCONS_00001321-exon-sc0000010-1510915933:154279..155140TCONS_00001321-exon-sc0000010-1510915933:154279..155140Clytia hemisphaericaexon
TCONS_00001321-exon-sc0000010-1575043694:154279..155140TCONS_00001321-exon-sc0000010-1575043694:154279..155140Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000010supercontigsc0000010:139245..155140 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
11.6241 7.89719 5.61415 21.0129 0.704557 1.0681 1.09322 6.01964 0.509304 1.36769 0.751035 0.579869 0.828389 1.02972 5.48519 0.860562 0.932879 5.43451 0.000183838 0.881661 3.94037 6.25052 1.30465 1.45619 8.37268 1.75033 3.06726 2.60877 0.00109589 0.000710049
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00001321 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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