TCONS_00001321 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001321
Unique NameTCONS_00001321
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2719

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001321 ID=TCONS_00001321|Name=TCONS_00001321|organism=Clytia hemisphaerica|type=transcript|length=2719bp
TTTGACGACGAAGATTACGAAAATGCTGATGCAGGATTTTGTGAAGGCTC
GCCACCTCTTCAGCCACCGCTTCAGCCACCACCAAGAACATACAGTCAAA
ATGTGAACACTTTCAACAATAGTAATGATAGCATAGATGAATCCAAATCA
TACAACTATCTGtcgCAAGACGATCAAGATGATATATATGATACACCAGA
AACTGAAGAAATAGCTCGCCCACCACCTCTGCAACAGAAACCACAACGTC
CAGGAGGGTACGCACGACAACCACAACACCAAACTCCAATACCACAACAC
CAATCTCCAATACCACAACACCAATCTCCAATACCACAACACCAATCTCC
AGCAGCACACCAAGATAACTTCAATATGAGCAATAAACGCACACAAAACA
TTGATAAGCATCGTCAACAATCGTTCGCTAATAGTCGAGCAATGTTCGAA
CAGAGATCAACTTCACCTCCACAACCAGCTATCAATCGATCAGCTAAACC
ACCTGTACAACAACGTCGAAGTGATTCTAACAATAACCCGCCCTTCGCTC
CCAAACCCAATATTTCTAAGCGCCCAACGATTCCAACGCCAGCAGCGCAA
CAAAGGGTGGTACCGCCCCAACCGATCCAACTTCAAGAACCTCAACATTA
TGAAATGGATAACCAAAGCGAAGACTCGGGCTGCCATGAGGACTTTTACA
TTGAGCCGCATCAAGCCAAAAATGCCGTCATACCCCACGAAGAAGAAACG
TATGAGGTCACAGACGGGCCAACCTCCCCGGTCGAAATCATATCCTCAAA
ACCTAAAGGCATGCCTGGTCAGCAATTCATTACACAACTAAATCGAATGA
CCTTAGAAAGATCTGCTCCCTCACTTCCCGCCTCACAGAGCAAACCAATG
GCTGGAAGACCTCTCGTACCGACCCCAGATCAAGAAGAAACTTATGAAAT
CGCACCTGAGAACCCTCGTTCACCACCATTACCCGGTAACCACCCTTCAG
CCGCAAAAAGCCCCGGCATCCCATCTCGACCTTTCGTTCAGAGCCGGCCA
CCAATGCCAGTACCATCACCACCACCACAGGAAGAAGAAACCTATGAAGT
GACGCCCGATCAAGCGCCCGCTTTACCACCCTCACATCCTTCCTCGAGAA
AATCTTCAAGTACTTCGTCTATAGGGGAATCACCGAGAACGTCCATTAAA
GACAGATTACCAAATCCTCGAGATAACATACAAGAAGATTATGAGATGAT
AACTCATAGCCAAAGACCGCCTCCTCAACTTCCTATCTCTTCACGTCCAT
CTCCACCCCAACAAAGGCGCCCACCACCCTCGTTAGAACCAAAAGGTCAA
GAACCTGTATTACCTCcgCGCAACGAGAAACCGCAACGCCTTTTACCCTC
GCCTTCGCAAGAAATCAACATTCCACCCAGAACGCCAAAAATGTCACAAC
CACAAAACTCGATGCCTCCAAAGCTTATGGGAAGGCCAAGCCACCCAGCT
TTCCAACAAGCAACGATGAGTTTAGATCGAAGCAAGGATACTTGTCCTCA
ACCTACCATAGAACGTATACCATCGTACAAAAAGCAAACACAATCTGCAA
ATGCACCAACGCCTATCAATAGACAAACGCCTGCTCCCGCCCATCCGTTA
TCTGGTTTCACCTGGTTCCAACCGGAGCTTGATCGTAGAGCGTGCgaaat
taaattgaaccaaaacagaAGGgATGGTGACTTTGTGATACGAAACTCAT
CCAAAGCCGGTGTCCCATTTTCTATATCAATCTTTCACGATAATGTTGTC
CGCAATTTACAGCTGCTTCAAAAAGACGGTAAAATGTACTTGGGAAGTTC
TACTGAGGGGTTTGAAGGAGTACCTGAATTGGTATCGTATCATCAGAATA
ACGAAATCATACTCAACACTGGTGGTAAAGTGAAACTACTCAGGATTTGA
TGGCAATAGAAAATTTAGTACGCATTTATAAGgaagaaaaacgaaaatat
ttttgggtaaTGTCAGAATGGGTGAATCCAACCAAAGCTTTGTTGGAGCT
TTTAAATTCAAGAATTCGGAAGAGAATTCGCCTTGTGGACTTTAAAGAGC
TATTTATAAGTTCATTCAATTGCAACCGAAAATATGGGATCAACATTGAT
CACCATCATTGTTTTGGATCATTGCTTTTTTATTAACGGAGCTTCAAGAT
TAATCTCCCGCCGCCTTACTAATAGATCTTATTGGAGTTCGGGGGTatta
aaatagaaatctcttaggaattcctcgggggaattctattgtaatactcc
cgaaacaattccacaatgcatcgcttttttagaaaaatcaaaaacttcga
TAAGATCTATTTACATGGTCTCCGAAAAAGTCAGAACACTTACAGATata
gaagaaaaaaagtattttttatgGGATATCTATGAAAGACACTTCGGAAA
GGCCGATTTAAACAATCACAAAGACAAACTTGGTGATAGAAAATGTTTCA
TATTGAACCAGAGTTGTTTTTGGTGATACTTAGTTAATTTCTTGTTGCTT
TTTagtttagatttttttgttatgtaaatacgaatttgattatttttcta
aataattaTTGATAGATGAATAGGTTTTCTAATGGCggataattcttttt
ttaaatatttgtaATTATTGGTAActtaaatttacagaaaaatatttttt
tcaaatgtttataTTAAAA
Run BLAST on NCBI

transcript from alignment at sc0000010:139245..155140+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001321 ID=TCONS_00001321|Name=TCONS_00001321|organism=Clytia hemisphaerica|type=transcript|length=15896bp|location=Sequence derived from alignment at sc0000010:139245..155140+ (Clytia hemisphaerica)
TTTGACGACGAAGATTACGAAAATGCTGATGCAGGATTTTGTGAAGGTAG
TAACAATCGAGTATTATATATGTCAAAGTATCGTACTCTAGAGATTCACT
ATTTCACGGCTCGACTATTTATTCCTTAAAGATTAGAATGAATTGTACGG
AACATTAGAAGGAGCGGGGATCCGAATCGCGAATCCCTGGTTcgagacgc
tgacgcctttgaccacttagCCATCACTCCATAATTGCTCTATTTTGACT
GACCATTTGATACAATGGTTTTTCGAAATGAACTTTCAATTGTAGTAACT
GTATTTCTCTCAGCTTCTTGTAAATGTTTACGAATTTTTAGAAAGAAGAG
AGGAACGATAAATATGATAGCAATTAGAAACTTTGGTAATCATATTTATG
GGACTGTTGCTGTAAGGTTAATCTTTTTTGTCAAGTTGTGTACAGAAGAT
AACCTGTGTTAAATTTACTGTGTTAATTTTGTTGCGCaatctaaaatttt
tctctTGATTAATTTTTAGGCTCGCCACCTCTTCAGCCACCGCTTCAGCC
ACCACCAAGAACATACAGTCAAAATGTGAACACTTTCAACAATAGTAATG
ATAGCATAGATGAATCCAAATCATACAACTATCTGGTAGGTTATTTTGTC
AACAGTTTTTGTACGACTTTTTACACGTGAACTTATATTTTGTATGCCCG
AACATAATTTTGTTCGCTTACTATTTCTTTGGTGATAATTGCATTTAGGT
ATTGGGTAACCCTTAAAACCCTTCCTCTGCTTATACTAAAAAGTCCTgtt
caatgtgaaaaagatgTTGGACTTTGACTTGGTTTTCTTGAGTGTCTACA
TTGATCGAGCCTAGTGTATAACTTCATAGAGCCCCCCCCCCNTGAGGATA
TTTACGGAAATTCGTAACTTGAATACGTGACCGACCCTCCAtattttccc
tcttttttttaCAGTTTGACGACGAAGATTACGAAAATGCTGATGCAGGA
TTTTGTGAAGGTAGTAACAATCGAGTATTATATATGTCAAAGTATCGTAC
TCTAGAGATTCACTATTTCACGGCTCGACTATTTATTCCTTAAAGATTAG
AATGAATTGTACGGAACATTAGAAGGAGCGGGGATCCGAATCGCGAATCC
CTGGTTcgagacgctgacgcctttgaccacttagCCATCACTCCATAATT
GCTCTATTTTGACTGACCATTTGATACAATGGTTTTTCGAAATGAACTTT
CAATTGTAGTAACTGTATTTCTCTCAGCTTCTTGTAAATGTTTACGAATT
TTTAGAAAGAAGAGAGGAACGATAAATATGATAGCAATTAGAAACTTTGG
TAATCATATTTATGGGACTGTTGCTGTAAGGTTAATCTTTTTTGTCAAGT
TGTGTACAGAAGATAACCTGTGTTAAATTTACTGTGTTAATTTTGTTGCG
CaatctaaaatttttctctTGATTAATTTTTAGGCTCGCCACCTCTTCAG
CCACCGCTTCAGCCACCACCAAGAACATACAGTCAAAATGTGAACACTTT
CAACAATAGTAATGATAGCATAGATGAATCCAAATCATACAACTATCTGG
TAGGTTATTTTGTCAACAGTTTTTGTACGACTTTTTACACGTGAACTTAT
ATTTTGTATGCCCGAACATAATTTTGTTCGCTTACTATTTCTTTGGTGAT
AATTGCATTTAGGTATTGGGTAACCCTTAAAACCCTTCCTCTGCTTATAC
TAAAAAGTCCTgttcaatgtgaaaaagatgTTGGACTTTGACTTGGTTTT
CTTGAGTGTCTACATTGATCGAGCCTAGTGTATAACTTCatagagccccc
ccccccagcggttttcatgatggcgtgattggtGTGTGATCAGAGGAACC
AACGTGATCATTatagaaaggaaatttaactTGTGATTGTgtgatttgaa
aggtgactgggGGCCTCTTCATACAGTTCAACTCCTGATTCAGACAAACA
TAGATTTTATATCATGATATTGCAATGCTCCTAAGTAATTTAAAATggtt
ttaaaagtgttttttgtTCACACGGTATCGGTTTGCAGCACCTCATTTTA
CGAAGTTCtgatatttgttttttataagtaaTCAAATGTAACTTATCATT
CAGGACTAGGATTACCCCCAGTACCAAACAAGATAGGATCGGCTTACATA
GTTTTAACACGGGGAATTTCGGCTGTGTGAAGCCATCAAAGTTCCATTTA
TAAAGTGCGAGATCCAGTTGAGAAAATctacatattggaaaaggtcttTT
CGGGGAAAATGTTTTGAAGTTTTGGGGGTTTCTTTTCCTTGTAAGACTGA
TATGATAGTGACTAAAATTCAACGAATTTAACCCATGGGAAAATGAAAGT
AACAAACATTTTTGGAGAACTCAAAGTCTGTTAAAAAATTAGTATGCTCC
AatatgatattttgaattttttcggTCAAGTAAAAAAGGTCAGGGGGATT
ATTTTGGGGAATTACTTAAAAAATGCCATGCAGTATTTGAAAGAGAAATT
GCTTTATATGATATACTTTCTTAAACAAATACCTTTGCATCAATTATCGT
GTTTAGATTAAAAAATTTGTGTGTACAGTACGTCaacattttgagaaatt
caaaGTACACGATTtattagtctacacaatagacagatacaggcttttag
gccttactcttgttCTATAGGCACTgatataggcggccactagtgaaccc
caccgggaattgcttattaataggtttaaacataatagacaacattcaca
aaagatgtttatcaatagagattttaaataaaagaatgtttaaaacacag
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACGATTTATTAACAG
GACTAAACACGTCtctttgtttttaatgtttatcTTGTTGTCGAAATCGG
tgaatcatttttctttttgtatacACAGGGCATCCCCTCTCATTAATTTT
CTCGTCTTTTTTGATCGAACTTGTATCATATAAGTGTTTATACGCTTGAT
GATTGAAATctatgtttaaagattttttactgctgaaagtttaaaaagga
agtTTTTTAGGGAAGGctgtttaaggctttttgaggattttttaaaaagg
tttttggGGATTTTGGAAACAAGCCTTAGAATTATTCAAAAATGTATGAA
GCCTTCCCTATGGTAAGTGATATTTTGCTTTGAATTCTTGAAATTATAAT
CTTAAATCTCTTTTTAGCAGGGGGGGTGTCGGTACTAAAACccaagacat
atatgagtactacaaggttttttgacgatttttgacataccctcacctaa
tttttgaaaaaggaattttagtacacatgtactgaaatttatttttacat
tttagcaTAGTGACCACCTAAATAAGGCTTATTTTGGAATTCGGTTCGAA
GAATGTGGGTCTttggactttcaacaaaatgccAACTCTGGTTATTTAAG
CTGTCAATGAACCTGATATATCTCTATCTATTCTAGATAAAGACTCAGAA
ACAGTCAAGACACTTTTGCCCTGCTCTACTTTAGTTATTGCAAAGATTGA
TGGGTTATTTTTCACCTCTAATTTACAGAggaacctttttcctcagttga
gataaaaatttcctattgaaatattaatggggatacaaattctattgttc
caaggttaaaaacccagtggggatatgattttggagtgcaatttttacac
atggaattttgagtggggatgaaatcaaagtcaatttcccagtagggctg
aaattcaagggtattctaccaccggggacaaaatttttgcttaatttgtg
acacagggacgtatttaaatcttatatagagagtttttattttttcattt
tgcctaaaatgctcAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNtagttaaatttcctaaaatttggtgatttttagtact
catgtattaaaatttttcttaaatttcttgaagacccccacctaatttgg
gattttagtacacatggtactaaaatgcttttaggctttttttgtaatac
caccacgtcactaaaagtcatgatgtctgaaattttagtaccgacccccc
cccctctttttaGCTAAATTTATAGTTTTTCACACAAAGACtataagctc
tagtttagacggccgactttctgccctgtctattctaattgttagagtag
gcagaagtTGGGCAAAAAGTTGGCAGctaaagacattgcattgacgtcaa
aagagggcgatgcattgactttagacggcccactttatgcccactttgat
tcacaattagaatagacagggcaaaaagtgggctgtctaaactagagcta
agctCGTCTGAAAGGGTAAAAGAAAATTGTCAATACTTTGTATGTATTGT
CAGTACCTGGTAACTTTCAGTTTCGGAAATTTTCAATGTCATTATTAAGT
ATTCTACTCATTTTATCTTGAATTTGGTCACAACTTTCATTTAGTATTGG
CGTCATAAATGAGGTATTATTTCCTTGAAAGTTTGTGAGAGATCTATGGG
CCTGTGTCAAAAAATGTTGCCTTTGAAGTAGGTTTAAAGCATTTTGTACA
TTTACGACGAATCTTTGTTAAAAAACAATAGGccgcaaaattaaacacct
tttttgacaacaaataatatgcccataacttttgatctagagaagttggg
attTTGAtgcaatacacttttttgctcagtttgaagagttCTTACGTAGT
ATAGGTcttctttgattttgaagacccccaaaaatcatgaattttctgac
ctttcaattttgtttggaaacgcaaaaaatcgaaaattatgcAAAAACTG
CAGTTTTTCAAggttggtaacattcaaattccgaatcagcaccctcaaat
tgaccaaaatcaatCATGAaaggacattttgaaaaaaagtgaaacgtttt
ggtGGCACTGCACTGGCCTACAAGTTTCCATTTCAATAGAGGGAAAGGTA
ATGATGTTTATCTCTAAGCAATTATAAATGAACGATCTTAAAGCAGTAAA
TTGCTTTTATAAATGGTTTTGAAATTAGCTAACCGCGTCTTCTGAAATGA
TTTCTATTAACTTAAATTAAGTTTTGGCTCCTATGTCATATGATACGTTT
CGTTTAAAAGAACATAGGCGGACAGTTTTATCATGAAATTTAAATTGATA
GAGATATTGTTAAGTAATCTGGTCTATTGAAAACAACTTTTTAGCGTTCA
TTATCTGTAGAAAATAGATTGTAATCAAAGTCACAGCTTaggttgtctgt
acacagacccgatatctacggctaatttcaaaaattcatttccgtagaca
aacgtgagatacactctggtacagagtacagCTTAGGGATCTGGATATTA
CTTTTGCTTTTTGCGTTTTGTTCCTATTTCGAATTTAATCAGGTATAGAT
ATTCTGTGATTGAAATATCTCAATTCTGCCCAATTTAGTAACTATTACTG
CTACTTTAATCATATAGCTTTCGTGcttaatatttttggaaaatagtttT
GGAAGCCCTAGCGAATTTATTGTATTGTGTTAGCATCTTGAAGACATGGT
TTTATGGGATTTGATTGTCTCAATTCTGCTATAATTTAGTAAAAAATTTA
CTTCAATATACTTCACTCGTATAGCTTTTGTGCTCAATGTTTTATGtagg
aatacacgtttttttataagaacaaactatataagaacataaggcttcac
tggccaaaatgttaagagcaagttaagaacattttaaggctttgtggact
caaaaccacccaatttcttaggaaaatagtcaaaattattcacaaaatgg
tcaaaataagaacatgttcagaacaattttaggcttaaaactcaaaaagt
tcagaacattcaaggcttcaaaaaatttggatgtttttataaaaaaaacg
cgtAGTCCTGGTAACCCTAGCAAATTTACTTGTATTTTCTCAATATCTTT
ACTttccttttctttatttttcatttatcacatttttttttcagtcgCAA
GACGATCAAGATGATATATATGATACACCAGAAACTGAAGAAATAGGTTG
GTGTATTTGTATTTAAAGTTCTTGACTAGCATAATTGAATGTCCAAGTTA
TTTTGTGACCAGCCAAAAGTATAGTTTTttattctgtttgttttttttat
acaaGTTCGTCAAAATTAGACGATATGTGGCGACTAGGACAGAAATAATT
TGATATTGAACGAAAACAACTATGATGATCAGTTAATcatggaaaaattt
taaaccccaGATCAAAATATTATTCAGGAATATTATTACAGTCTTGGTCA
ACTTAATGTATACACCGAATGTCAAAGTTTGAAACAGTCCATTTTTCATA
CTTTCGATTCAACTTTTACAGCTCGCCCACCACCTCTGCAACAGAAACCA
CAACGTCCAGGAGGGTACGCACGACAACCACAACACCAAACTCCAATACC
ACAACACCAATCTCCAATACCACAACACCAATCTCCAATACCACAACACC
AATCTCCAGCAGCACACCAAGATAACTTCAATATGAGCAATAAACGCACA
CAAAACATTGATAAGCATCGTCAACAATCGTTCGCTAATAGTCGAGCAAT
GTTCGAACAGAGATCAACTTCACCTCCACAACCAGCTATCAATCGATCAG
CTAAACCACCTGTACAACAACGTCGAAGTGATTCTAACAATAACCCGCCC
TTCGCTCCCAAACCCAATATTTCTAAGCGCCCAACGATTCCAACGCCAGC
AGCGCAACAAAGGGTGGTACCGCCCCAACCGATCCAACTTCAAGAACCTC
AACATTATGAAATGGATAACCAAAGCGAAGACTCGGGCTGCCATGAGGAC
TTTTACATTGAGCCGCATCAAGCCAAAAATGCCGTCATACCCCACGAAGA
AGAAACGTATGAGGTCACAGACGGGCCAACCTCCCCGGTCGAAATCATAT
CCTCAAAACCTAAAGGCATGCCTGGTCAGCAATTCATTACACAACTAAAT
CGAATGACCTTAGAAAGATCTGCTCCCTCACTTCCCGCCTCACAGAGCAA
ACCAATGGCTGGAAGACCTCTCGTACCGACCCCAGATCAAGAAGAAACTT
ATGAAATCGCACCTGAGAACCCTCGTTCACCACCATTACCCGGTAACCAC
CCTTCAGCCGCAAAAAGCCCCGGCATCCCATCTCGACCTTTCGTTCAGAG
CCGGCCACCAATGCCAGTACCATCACCACCACCACAGGAAGAAGAAACCT
ATGAAGTGACGCCCGATCAAGCGCCCGCTTTACCACCCTCACATCCTTCC
TCGAGAAAATCTTCAAGTACTTCGTCTATAGGTaagtaaaagagaaaaaa
atttgccaGCCTGGTGATCTTTCTGGTTACTGTGAACATCACAGTTTGGT
TTTTTCTGAAATTNAATTTGCCAACCTGGTGATCTTTCTGGTTACTGTGA
ACATCACAGTTtggttttttctgaaatttaacCTTGTGAGGACGGACAAT
TTTATCGCGTATGTCTCATCACATTTCTGATCATATAATGGAGAGCACGT
ATCCTCGTGTTATGTTCTAGCAGGTTACATCTTTATATATGTGAAAAAGT
AAGAATTTCTCTCcgactatattcactcaggagatttgggtggcagagca
gcatatgcatttcgtccttattgaGACTCATCCATCAGATATATATCTAT
CAGTGAATTGAGTTTCCTTCAAAAGAACTCCTATCTTGTGATTTGATTGA
TTAAGCCTTCATCAAAAATATCCTGGATAATAATTGTGGCGTGCAACTTA
GTGTCCGGTATCACAGCCTGCAGTTTCATTTCTCGTCTAATTTGGaacta
gcctagttaactaagcctgtattcacaaggctaggataCACCGCTAATGG
CAATATAGcattttcggcgctttaaagattttttatatttacggatttta
tgtttgccttggaatactggtAATTCAGTTACAagttaccatcagattta
tcctagtgactgaatcaaaccaGTTTAGATTTCTAGGCTTATTTGGAGCT
AGGTGGTAATAATATCTAAGCAGGTCATAAACTATTCGATTCATTCTACC
ATCATCTATCTTCTAATACCTACAGGGGAATCACCGAGAACGTCCATTAA
AGACAGATTACCAAATCCTCGAGATAACATACAAGAAGATTATGAGATGA
TAACTCATAGCCAAAGACCGCCTCCTCAACTTCCTATCTCTTCACGTCCA
TCTCCACCCCAACAAAGGCGCCCACCACCCTCGTTAGAACCAAAAGGTAA
TGATCATTCTTCTCgttgaatttctttttgtacTTGCAGGTGTGTAGCAA
CTTATTCACATTCTTTACCAAGTAGGATGTTTAGGACATTCATTATATTC
CAGATTTTTCCacgaaaaagttgattttgtattggaaatccaggagttac
aaaaaacattttacctTAGAAATCCGCtatcgtccaccccctgtatgctG
TTTCTCAACAGCATTTCttcaactcaaaatttcagaaaaaaaacttttat
ccaCTGACATTggaattatttttctaaaatttaaagtGAATTTTCGTGAG
GGGTATTGAAACTCTAGAAACTATGATCATTAATATTTTGGGGAATGAAA
AATAGGATTCTGTTGATATGTTGATTCTTTGTATACAAAGAGAAAACACA
AGTTGACATGCATGATAtcgttaatatttttttgttgctttttaagGTCA
AGAACCTGTATTACCTCGTAAgcataaatatttatatttcattattttgt
aaGCTAAGTCGAGTCTTCATGGTCCCTTACttataaagattttgttttaa
aaaaaaactacgaACGAGGGGGGGggatttaaaactttctgatagTTGGT
CTTTTATTTTAGCTAGAAAACTTGAGCTTTTGGAAGCCGAAGATAGTGAT
CTGATGACCCCTGATGCTGTATTGTGCTCCAAAGAACTTAATATTTCCTT
TTCAGCCaaacatattttcaatatatccttcaaaatatttttcatttcag
cgCGCAACGAGAAACCGCAACGCCTTTTACCCTCGCCTTCGCAAGAAATC
AACATTCCACCCAGAACGCCAAAAAGTAAGTCAACTCGTTATATGCACCA
TAGCAATGTCTTTCACGGACCCaacatctgattggttgaaattgacgtat
tgactgaatttaccaatcagctattggttccgtgatgtaatatcagaaga
cattgcaatggtgcatgtAATGAATAGGGTGTGTTTATAATTGATTGGTA
TTTTAAAGACAGGGATATCAATACGCTAACGAAGTTTTTTCTCTGTTGCC
ATCTTCTGCTCGAGAGAAAGATTCAAAGAAATTGTGTTTTATCTTTGAGA
CTTTCTGATCTGAAGGTACCAAACTTCACACTACTGATTGTATTATATGC
TGCAATTAAAACCATTGTATAACAAAAACCCTCGACACAAGATTACCTAC
GAACCAGATTTTGCCAATTCTTTGGGGCGCACATGGTttatacccagctg
gcacacaacgttgtttcaacgttcatctaacgttatatggacgctgtgaa
cgttagataaacgtcgaaaaaacgttatgtgccagctggatAGTAAATAC
TCTTGAATGATAAGTGAGGGTAATAAATTGTTGGCAATAGATAAATTGGA
ACATCATGTCTTGTTTCTTTTTCCATACAGTGTCACAACCACAAAACTCG
ATGCCTCCAAAGCTTATGGGAAGGTAAGCAAAATACTGGGTTTTTGAAAC
TTTGCGTTTGTTCATGGTTCCTTTAGGTACGACATTTACATAGTTCAGGT
GGAAAGCTTTCACGTAACTTTTCGCGAGGttgaaaattcgcgaaaattat
tAAATAAGTTTTCGTAAAATAAAAGGAGTATGGAAGTCTCTAAGCCATAA
CGACGTATAATTTGCTGAGATCACCatgtttgaatgaaaaagactttgta
gtattattttttgaaaaatacggAGTTAAAAGACAGACCATGtcgtgatt
ttctaaaaaagataatTTGTATGTCTTAAACGTAAAACTTTTGAGATAGA
TGATGAGTGGCCTAAATAATTATTGTCACGAAGTAGAGCCTTTGCTGAGT
ACTTTTTCTGTCTCGTTTTTGATGCTCTAAGGATGGTTACTTCCTCGACT
TAATGACTATTACTGGGACTTAAACGTCCTTAGAGATTTTGGAAATTTGG
TCTATCAGAATGTTCCTCGTTCTTTTTTACCCTAATTGAGTCCGGCTGTC
CGGTGCGTTTTCTTTTTAATCGTTTTctttcactgacctttatatatccc
tggaccaagttactcaagcaaaatattatgatcggagtttttttgaaatt
ggtacccgtgGAGAGGGCGCTAGATCTAGTTTTGCTTGTACATTAATGAT
GTATCATCGTTTGTCGTAAGGCAAAGTctcaaacactacaatggcttctt
tgagggtaccaactttcaaaaacttcgatcaaaggtGGCGGATATTGCTT
GGttcagggatatataaaggtcagtgttttCTATACAAAAAAATGTAAGG
TATCATTTTTATGCAATGAGATCTGCAATATCCATCTGTGTCTCTTACCC
CCGTGACTTACTACCATTGCAGTCTACCTACATTCAGTCTAAGCAACAGC
TGGCTCGAAGATGTCAAGTGCGGACAAAGGAAAACCAGCCTCGATATGGG
TGCCATAAGTCCGAAATTATTTCGTCGTATAAATGACCGTCGTTCAAGCT
TATCTGCCGATGAAATTCAAGTCAATCACTCAACTGCATGTGTCTTAGGG
TAGGATGATATGATAAATCAACATtgactaaaaaagaaaacatgacaCAC
AAAGAGACATGGCGTGACAGTTGAGTTCCGGACAAATATAATAGGCTTAC
TGTAATCCGTTTCCAGTACAGTGTGTCCCGAATAAAGTTATCAAGAAAAT
CTTGGCAAAATCAATCAACTCGTTGGCATATTACCGGGTGTGTCAGAAAT
AAGTTACcctttttgatttgatattgtaggcTTTTCGCCTTTTCTgacaa
tttttaaaattgacattttaggtttttaaacataacttttgaacccatga
agtaaaattaaaaagtaatacaccaaattttaagttaggctttcctctgt
ATGATtcagaaacttttgaaaaacctCTCAACTACTGACaacaatattaa
attaaaaaaggATAACTAATTTCTGGAACACCCGGTAGTTTAAAAAGATA
TTTCGATTCATTCCTAGAACAAACAACTAAATACAAGCCAGTTGTAAATC
GTTAACCCTCATACTGTGATGGAGGATTTTTCATATACTAAAAACTGACC
TCTTGATTCGGGACATGCTGTAAATTGCATGTTAACATGGAAATAACTGA
ACAATCAATGTTCATCAAGGATGTGAGACTTTCAATAATGTTGAAACTGG
TGACGGactaaaattctgaaaataaaatgcaaaaaaaaaaaatacattag
TTTACNAGACTAaaattctgaagaaaaaaaatgcaaaaaaaaaaatacat
tagTTTACTTTCGACGAGTAGATTTGCTTCTTTACTTGTTCGTGAAaata
aatttcgcgaaattgaatgaaatggaaatttttaaagttttgttttcGAC
GTTTTGTAACTCCGAACGTTTTAGTTTTGGCGAAAGCTTGACAtcttttg
gaccattttcagttgatttaaGGCCTTCTAGGAAAATACATCAACGCGAA
ACGTTTCAAAATATTGACTTAATAATGGAAATAAATCGAGAAATTTGTCT
CGCAGAATTGAACCTtgtgaaaattaatccaattaaagcaCACTGACAAA
GAACAGTTTAAACAATGAAATATTGATGATTTTGACGAACATTACCTTAA
CATAACCAATGACATACGAAATATCGActttacaaaatagaaatactTAA
CCACTCATACGCGTACAAAGTTATTCTAAATGAGACCTTCAATCTGTTAC
TTTTTTATGGAATTGTTCATTTAATATTTTAGCAAATTAATTATCAGACA
TTTTCTAGATACAGTTTTCCTTCCTTTTTGAAACAGGCCAAGCCACCCAG
CTTTCCAACAAGCAACGATGAGTTTAGATCGAAGCAAGGATACTTGTCCT
CAACCTACCATAGAACGTATACCATCGTACAAAAAGCAAACACAATCTGC
AAATGCACCAACGCCTATCAATAGACAAACGCCTGCTCCCGCCCATCCGT
TATCTGGTTTCACCTGGTTCCAACCGGAGCTTGATCGTAGAGCGTGCgaa
attaaattgaaccaaaacagaAGGGTGAGTACGTCTACGTTTAGGATACT
GTTCGCCCCTTGAGGTACTCTGCACCAGaatgtatctcacgtttatcgct
tcgtagtacactctgtgcgcattgtctgtttgataaaaaaattcccgtat
ggagacctctgcgatgaagtatgatttatataaatagcaacacttctctc
gtcttctccccctctctcaccaacactccatcgcagcggtcggtttgaaa
aatctcaaatgagaaaaggcaatgacaacagaccctctacggcaatgaat
tttgaaattagtcgtagatactgggtctgtgtacaggcAAACTTTGAGGG
AGTCAAAGGTTATTTCTCTCTGCTACTCGAGATGTTCAATGGCTCGAACG
ATCACTGTCTACTTCTTGGTGTTTAAAGTTATTGTGACTTAAAAGTATTC
CTAAAAGAAGCAAGGTGATTTTCCCCTGAATAAACCTTGACTAAAATTGG
AAATTATGTTCATTTGAAACTCATATGAATCCTTTTGTGTTTGTTATTTC
GTAGTATTTTCAAGTCAATCTCGTTGAATTGCCTGAAGGCTGCAAtacaa
cgctttttttataataatacactttataagaatgtccatgataaaaatgg
ccaaaaaattaaggataatgctaagaatatcaccatcatggaattttgct
actcagctaagaatgacatttttagagcattttcaattataaattgccaa
ttacccccaagtaaggctcactcctttcacaaaaatgccattttatgctt
gagacgtatgtactaaatgtcaaatctagtctgaattaggattctaacct
aagaataatgtaagaatattttaggatgatttttttaagaaaatccatga
taaaatggatttacaccattcttatgaaAATAAGCGTGTATTTGAAGCAC
ACATTTCAAGGTTTTCTAAAatcttttctttactttttaggATGGTGACT
TTGTGATACGAAACTCATCCAAAGCCGGTGTCCCATTTTCTATATCAATC
TTTCACGATAATGTTGTCCGCAATTTACAGTAAGTGTCCGAAAAAGTTTA
ACAATCGCTATTAAATGCTTTTCATTGATGTTAGGTGTATAATATTTTCT
CAATGCAGAATTTCCTaatctaccttatcggggaaaaaaatgtcggagtt
ttatttaaaaaagatcttgtaaatcgacgtttaaagcacttatttcggtt
aataaagatgtaaaaaatatagattttaattttggttggggtttaaagaa
ttgggtaaaagttttggtcgggtgataaaatatcggggaaaaaattcgta
gggggaaaatttcgtcaccccttcaaaattttcgtcacttccCCCCGACA
TTTTTCCCAGATAAGGTATAGCAACGTAGGCAGAAATTTTCAAgatcaaa
aattgaagaaaaagatttcgcgatttctttaaaaacaataatTCTAAAGA
GCAAAACtttatggaaaaaaatataaaaggtAGAAATGTGTCCGTCCATA
TATTCTGTGAATTTTCTTACTTGATAGAAACTAGCCAAAATAggccaaaa
ttacaaaattatctGCCTAAAAAGTATTGAACACAAACCGAAGATTAATT
CTTTTCCATTTATAGGCTGCTTCAAAAAGACGGTAAAATGTACTTGGGAA
GTTCTACTGAGGTAGGTCATTCATTAAACACTTATACATACTCGAAGTGA
CCGGGAAGGGACTCGGTGTCATCCTCCAAATAATGTTATATGCTATGTCA
TGCATGGTAACACGCTCCATATTGAGTAATATTAGCCATAAACTCtctgg
tacctaatagccgggggggggaggaggttggaaaaaatctcaaaacttaa
taagcggggcgttagaataaaaatgtcctaggtggaaaattttcgaaaaa
ttaattagtgggggggcggctattaggtacccgagagtaagccTTAATAC
AATCACAGTAGAATTTTCTTCTGCCTAAAACAGATTTTCACCTCTTAAAA
ACCATTTATTTATCAGTCATATTTTTGATCAGCTAAGATGGATTAATGAG
TTTCTCAATAACTTTTTATTCTGCTATCTTTCAGGGGTTTGAAGGAGTAC
CTGAATTGGTATCGTATCATCAGAATAACGAAATCATACTCAACACTGGT
GGTAAAGTGAAACTACTCAGGATTTGATGGCAATAGAAAATTTAGTACGC
ATTTATAAGgaagaaaaacgaaaatatttttgggtaaTGTCAGAATGGGT
GAATCCAACCAAAGCTTTGTTGGAGCTTTTAAATTCAAGAATTCGGAAGA
GAATTCGCCTTGTGGACTTTAAAGAGCTATTTATAAGTTCATTCAATTGC
AACCGAAAATATGGGATCAACATTGATCACCATCATTGTTTTGGATCATT
GCTTTTTTATTAACGGAGCTTCAAGATTAATCTCCCGCCGCCTTACTAAT
AGATCTTATTGGAGTTCGGGGGTattaaaatagaaatctcttaggaattc
ctcgggggaattctattgtaatactcccgaaacaattccacaatgcatcg
cttttttagaaaaatcaaaaacttcgaTAAGATCTATTTACATGGTCTCC
GAAAAAGTCAGAACACTTACAGATatagaagaaaaaaagtattttttatg
GGATATCTATGAAAGACACTTCGGAAAGGCCGATTTAAACAATCACAAAG
ACAAACTTGGTGATAGAAAATGTTTCATATTGAACCAGAGTTGTTTTTGG
TGATACTTAGTTAATTTCTTGTTGCTTTTTagtttagatttttttgttat
gtaaatacgaatttgattatttttctaaataattaTTGATAGATGAATAG
GTTTTCTAATGGCggataattctttttttaaatatttgtaATTATTGGTA
ActtaaatttacagaaaaatatttttttcaaatgtttataTTAAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000718XLOC_000718Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001321-exon-sc0000010-1491911889:139245..139290TCONS_00001321-exon-sc0000010-1491911889:139245..139290Clytia hemisphaericaexon
TCONS_00001321-exon-sc0000010-1510915933:139245..139290TCONS_00001321-exon-sc0000010-1510915933:139245..139290Clytia hemisphaericaexon
TCONS_00001321-exon-sc0000010-1575043694:139245..139290TCONS_00001321-exon-sc0000010-1575043694:139245..139290Clytia hemisphaericaexon
TCONS_00001321-exon-sc0000010-1491911889:139764..139879TCONS_00001321-exon-sc0000010-1491911889:139764..139879Clytia hemisphaericaexon
TCONS_00001321-exon-sc0000010-1510915933:139764..139879TCONS_00001321-exon-sc0000010-1510915933:139764..139879Clytia hemisphaericaexon
TCONS_00001321-exon-sc0000010-1575043694:139764..139879TCONS_00001321-exon-sc0000010-1575043694:139764..139879Clytia hemisphaericaexon
TCONS_00001321-exon-sc0000010-1491911889:145789..145840TCONS_00001321-exon-sc0000010-1491911889:145789..145840Clytia hemisphaericaexon
TCONS_00001321-exon-sc0000010-1510915933:145789..145840TCONS_00001321-exon-sc0000010-1510915933:145789..145840Clytia hemisphaericaexon
TCONS_00001321-exon-sc0000010-1575043694:145789..145840TCONS_00001321-exon-sc0000010-1575043694:145789..145840Clytia hemisphaericaexon
TCONS_00001321-exon-sc0000010-1491911889:146166..147125TCONS_00001321-exon-sc0000010-1491911889:146166..147125Clytia hemisphaericaexon
TCONS_00001321-exon-sc0000010-1510915933:146166..147125TCONS_00001321-exon-sc0000010-1510915933:146166..147125Clytia hemisphaericaexon
TCONS_00001321-exon-sc0000010-1575043694:146166..147125TCONS_00001321-exon-sc0000010-1575043694:146166..147125Clytia hemisphaericaexon
TCONS_00001321-exon-sc0000010-1491911889:147920..148090TCONS_00001321-exon-sc0000010-1491911889:147920..148090Clytia hemisphaericaexon
TCONS_00001321-exon-sc0000010-1510915933:147920..148090TCONS_00001321-exon-sc0000010-1510915933:147920..148090Clytia hemisphaericaexon
TCONS_00001321-exon-sc0000010-1575043694:147920..148090TCONS_00001321-exon-sc0000010-1575043694:147920..148090Clytia hemisphaericaexon
TCONS_00001321-exon-sc0000010-1491911889:148541..148561TCONS_00001321-exon-sc0000010-1491911889:148541..148561Clytia hemisphaericaexon
TCONS_00001321-exon-sc0000010-1510915933:148541..148561TCONS_00001321-exon-sc0000010-1510915933:148541..148561Clytia hemisphaericaexon
TCONS_00001321-exon-sc0000010-1575043694:148541..148561TCONS_00001321-exon-sc0000010-1575043694:148541..148561Clytia hemisphaericaexon
TCONS_00001321-exon-sc0000010-1491911889:148845..148919TCONS_00001321-exon-sc0000010-1491911889:148845..148919Clytia hemisphaericaexon
TCONS_00001321-exon-sc0000010-1510915933:148845..148919TCONS_00001321-exon-sc0000010-1510915933:148845..148919Clytia hemisphaericaexon
TCONS_00001321-exon-sc0000010-1575043694:148845..148919TCONS_00001321-exon-sc0000010-1575043694:148845..148919Clytia hemisphaericaexon
TCONS_00001321-exon-sc0000010-1491911889:149525..149567TCONS_00001321-exon-sc0000010-1491911889:149525..149567Clytia hemisphaericaexon
TCONS_00001321-exon-sc0000010-1510915933:149525..149567TCONS_00001321-exon-sc0000010-1510915933:149525..149567Clytia hemisphaericaexon
TCONS_00001321-exon-sc0000010-1575043694:149525..149567TCONS_00001321-exon-sc0000010-1575043694:149525..149567Clytia hemisphaericaexon
TCONS_00001321-exon-sc0000010-1491911889:151931..152168TCONS_00001321-exon-sc0000010-1491911889:151931..152168Clytia hemisphaericaexon
TCONS_00001321-exon-sc0000010-1510915933:151931..152168TCONS_00001321-exon-sc0000010-1510915933:151931..152168Clytia hemisphaericaexon
TCONS_00001321-exon-sc0000010-1575043694:151931..152168TCONS_00001321-exon-sc0000010-1575043694:151931..152168Clytia hemisphaericaexon
TCONS_00001321-exon-sc0000010-1491911889:153135..153223TCONS_00001321-exon-sc0000010-1491911889:153135..153223Clytia hemisphaericaexon
TCONS_00001321-exon-sc0000010-1510915933:153135..153223TCONS_00001321-exon-sc0000010-1510915933:153135..153223Clytia hemisphaericaexon
TCONS_00001321-exon-sc0000010-1575043694:153135..153223TCONS_00001321-exon-sc0000010-1575043694:153135..153223Clytia hemisphaericaexon
TCONS_00001321-exon-sc0000010-1491911889:153810..153855TCONS_00001321-exon-sc0000010-1491911889:153810..153855Clytia hemisphaericaexon
TCONS_00001321-exon-sc0000010-1510915933:153810..153855TCONS_00001321-exon-sc0000010-1510915933:153810..153855Clytia hemisphaericaexon
TCONS_00001321-exon-sc0000010-1575043694:153810..153855TCONS_00001321-exon-sc0000010-1575043694:153810..153855Clytia hemisphaericaexon
TCONS_00001321-exon-sc0000010-1491911889:154279..155140TCONS_00001321-exon-sc0000010-1491911889:154279..155140Clytia hemisphaericaexon
TCONS_00001321-exon-sc0000010-1510915933:154279..155140TCONS_00001321-exon-sc0000010-1510915933:154279..155140Clytia hemisphaericaexon
TCONS_00001321-exon-sc0000010-1575043694:154279..155140TCONS_00001321-exon-sc0000010-1575043694:154279..155140Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000010supercontigsc0000010:139245..155140 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
11.6241	7.89719	5.61415	21.0129	0.704557	1.0681	1.09322	6.01964	0.509304	1.36769	0.751035	0.579869	0.828389	1.02972	5.48519	0.860562	0.932879	5.43451	0.000183838	0.881661	3.94037	6.25052	1.30465	1.45619	8.37268	1.75033	3.06726	2.60877	0.00109589	0.000710049
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00001321 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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