TCONS_00001314 (transcript) - C. hemisphaerica

Overview
NameTCONS_00001314
Unique NameTCONS_00001314
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length631

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00001314 ID=TCONS_00001314|Name=TCONS_00001314|organism=Clytia hemisphaerica|type=transcript|length=631bp
TAAATATATTAAAAGATAATGAAAAACAAATCACATCAATTTAAAACATG
AGGCTCCTCGAAGCTTCCTTTGTCAAACTCTATGGTACAGATAATTTTTC
AGAAACGTTGTATGCATGGATATTTCACATCTTTTTTTATGATATGGGAA
GCCAAAAATGAAGAGTTGGATGTCCCACTTAGttttcaCTTCAATATCAA
CACCACCACCATCATTCGAACCGCCCTGTCCACCGCCCAACGGTTTCCGA
ATCTCTGGAGTGGATTTACTTGATAAAATCTTCGATTGAGGTAACAGATG
ATTTTTTAAGTCACTACATTTATCCTTGATAAATTTGTTAACAATATTTT
CAAGTTCAATATATCCATCACTTACGCTTAACTCGCAAAATGTACCATTA
ATCGAATCAGCTAATTGCTGTCCTTCACTAACTTGAACCCGGCGCTCGTT
TTTCTCTAAGTCTTTCTTATTACCGATCAGTAAACAAGGGATACCCCTTG
ATTTCTTTTGCTGCAATAACATTTTACTGATAGATTGAATTTCATTAAAA
CTGCTTCGATTGTTTATTGAATAGACACATATTAGCCCATTGGTCCAGAT
TAGATCGTTTGCTCTGCCTGACCAGTTGATC
Run BLAST on NCBI

transcript from alignment at sc0000010:70361..84242+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00001314 ID=TCONS_00001314|Name=TCONS_00001314|organism=Clytia hemisphaerica|type=transcript|length=13882bp|location=Sequence derived from alignment at sc0000010:70361..84242+ (Clytia hemisphaerica)
TAAATATATTAAAAGATAATGAAAAACAAATCACATCAATTTAAAACATG
AGGCTCCTCGAAGCTTCCTTTGTCAAACTCTATGGTACAGATAATTTTTC
AGAAACGTTGTATGCATGGATATTTCACATCTTTTTTTATGATATGGGAA
GCCAAAAATGAAGAGTTGGATGTCCCACTTAGGTATGatccattgttctt
ataaaaaacaggtttggaagcttattgttttaactttttcttgGCCTTTT
CATTCGTTATATCAAAAGATAGAAATCGATTTGTTCAGTTTTGGACACGT
TACCAAGTGGGATTGGTTTaaaatttaatcacatgatcaaaaagtgagca
aaacaaactcaACACAACAGTTCATGTAAGATACAATGGAAAGGAACAAA
AagcttccagaccggggttttctATAAGGGCTATGGTATGCTTGAAACTT
ATGCAATTTTTTACCAGTCAAGAAAAAATGGAATATAGAATCTTATCTAC
AGTACGCGAGAATCGCTTCTTCGCGAATGttctttggaaaatatttgTAG
CTTTGTTTtacattattttcattttgttattttgatgaaatagcTCTCTG
ATTGTAAGTGAGGTAATTTTTGCAAAACCTGGGGTCCTGTGACATTTTTT
ATGAGTATACCAAACTGATTTCATACGGTCGGACTTAGGCTTGGAGGTGG
GACGTTTAAATTAGCCAATTTATGAATAATTATCGACCGGAGTTACTATA
ATTAAATCTATTATATTCTCGATTTGAAGTGATaagtttaaaatgaaaat
actgCGGATATATTCTCATGGGTAATTAAACAACAACGGATGGTGTAATA
TCATAATATTCCTTGATAATAGCTACTTAATTACCCCTTTTTAACTTTCA
AGAGAACATGTCGTTCCATAAAGATTCTCAGTTCTAAGAAAGTGTACATC
GGTGCTTTCACATGAGTAAATTTCGATCACAGTTTCCTGGTAATTTATAC
AGATTTTTCTCGTTGGaattttgtttggttttcaaGATTAAAGATGCCAG
CTGATTTGCTGAAGATCCGTCTAAGGTATGtattgaaatttgttttgttt
tgtccgATTCTTAGTTCTGGATAATTTGACAGGTTTAAGGCATCTCTTCC
TTGCAAtcttgtacacgctttttttatataagaatggtgtttttctaATT
TGTCATGAATATTCTTTGCAATTTGGGAAAagtcatcctgaaatattctt
atggTATATTCTTGAAGATCTAGCATATAATAtatacaatcagtgacaaa
atactatCGGCACAAAATGGAAATTCAgtggggtgttttgaaaccacaat
ctatttgtaagtgctctaaagtaggttcgaagggtagagttttaacGCTA
GACTAAAGACTTAGGACCTTAGGATCTGAGGACCTTTAGGATGTGAGGAT
CCAAAAGTTCAAAAAttgtccagtagggcttgaaatatagcctagaaacc
aataaatccctcccagatcgaaataatcgatgaaatcaagttgaaggcct
agaaattgacattctcgctcaaacttcaattttcgaaaaatggtaaattt
aaTGGTTAAAACGCTCTGATAATGGCATTCTTCTTATGCCCGATTCCACG
ACGATGATAATCGCACcatatattcttaattttttggccaatgtcatcat
aaatattcttataaatagtatattcttataaaaaagcttgtagtTGCTTC
ATACTCTAAAGTAGTTAAGGTTCTCAAACAATCAGTCTTAGATTTTTCAA
CCTACTTTGCAACCCCCTGGAATTTACGAATTATGGAAGAATGCCCCTCT
AGagcaaaaattatttaaagGCTTCGTCTAGCATTATCATTATCTTTGGG
TTAATATTTTCGAAAGCTCATCGAGCTAAAGctcctttttttatttcttt
ttcagtaCTTTTCCCAACCAGCACTCAAAGTTCTTAAAGATTATTGACta
aaaaacagctgaaaatgttgttcgctaatcagaggtgtctgCCTTTTact
tagggagtggtcagaaagtatctactaggggggagtggaggatattttga
aaaatccaaaaaaaattcgcaccccctcccctaaccttgaaaaaattttc
gaacccccccctcataaggcccaatattttttccccccccccccctgata
aggcccccccccccccccgggaaaatttttttgcgaaaaaaaaaaaaaaa
ggaaaaaaaaaaatgatttttttcccgcttctgtaagacttttttttccg
gaaaaaattttccgggggggggggggggaatttttaaaaaatccaaaaaa
aatttccccccccccccccctacagGAAAATTTTTACGCGAAAAAGAATT
CATACAGATGCGGTATaaagagtattatttgtttgtattGTGACGAAGGG
ATTTTAGGTCTTTTTCCAATTAATACTACGTTATCTAATAAGTGTAACAC
GTAAATAACATCAAATAAATTAGTAACTCTGGCATGTAATTAACGATAGT
CTCTGTTCAAGTCCTTCTCCTTCAAGTTCTCCTTTTCAAGTCCTTTTCCT
TCGAGCTCTTCTTTCCAAGTCCTCTTCCTTCGAGCTCTTCCTTCCAAGTC
CttgatttctttccttttttcactCATATTCTCTCGCCCTATTCAGGGGT
CTGGGCTCGAGGGCCTGAGCCACACTCTATTGATTTCTATTCATCTTTCA
GTTCATTAATATCGTGTTGGCTCAGTCCCAGTCTCTGCTTGCATTATTCA
TCAATGATTAGTTTACTTGCTTCACagtatgacagttttttatgtcaaaa
taaggtaAGGGAGTTAGTTTAGCCCTGTTAAGTTAAAGTATAAACAGGGT
TAAGACAAGAATCATCAAGTGTTTTCTCTGAGTTTctgtaagatttggaa
acaattACGGCTTACTTTCCCCCCAGtagcgacctggcttaattttctgg
gggtgcaaactatgaaattggcgcccctggtattttttgtccttatttgc
gccctccattattaagtgaaaatattaagctgTAAGAGCAgtatggttga
aagtaacgcccggaatctttgagtcaagaaacttggaatttgttttttgt
aatttggaatgTTAAGGTGTTTTGAACAAAGGAAGCggaaccatggtttg
cgccggtggaaaatttttcaattttcaacttttaatcTGTCTAAAATGCC
CCATATTatagcaccaaaaataaagccactcaaataaaatacatgagctg
ttgatacttgaaattgAAGTTTTGTACCTGATAATCTAATCAGATTATTA
GgtaatttttctcagaaaaattacctgatCATCTTAATTAAGCTTTTGCG
CCActactttactctccattaaagatcaatggctaaAAGAGGCTAGGGAT
AAGGGGAACAAAAATTTCTGGTGAGAAAGGTCAAACAACTTAAAAGAGAt
actaaaaaggagaaatttAGTCAGCATAAGCaggcataagaccacaaaaa
ccacagcgagcatcaacaagtttcgatctttttggtATTCTCTCTNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNTCGGCTTTTCGCGATTCAATGTTG
ATGGTAGTTTCGGAAAAACTCAAGAGAAAAGATGCAAGAGCGCAAAGAAA
AAGCGCCGGACGCGAAAAAACTTAACATAACACTTTATAAAAGGCGCTAT
AAACGTGTGGAAGGGTGCCAAattgcccaattaaacatcaaccaaatttt
ggcgcccccttgaaaagctcctttggcgcccctctcagatctttctgggg
gtGCATTGCAccccctgcaccccctgccaggtcGCCACTGATTCCCTGAA
AAATTACTGATAATGTACACAATCTCCCTTAGTctattttgaaactgatg
gtgAGATGTCGAATAGCATTTTTCATCAGACATTACAGAGGCATCTCAAT
TACTCAAGAGAAAATTTGGTTACTCGAGACCCTAAAATAAAAGCTATTCT
GTTGTTAAAAGaggagtctgaaaaattaaattctctgagtttgaatttcc
ctatAAAGCCTATATTTTCTAGGTTTTCCAGGGGCTGTCAAAGGCCTGTG
TCTGTTAGTTAGTATGTAAGTTAGAAGACATTAGCAGATGCTAAGGAGga
gcaaccatggtttgcgccgacgggcgaaaatttcaatatttttcaccacc
atttttgctaaaaaacactttgtttttacaaatttcttttaagaagtact
ttttcaaaccactctgcTGAGCTGTGAGAGCCACTAATCCACTTCCCTCA
CCTAGCTCAATGTTAGAAACCAAAAGGGCAAGgtgatgatgcccaaataa
tgaCAATATGAAATGTACATATATCCAATAAGTTAAATTATGAGTTGTGG
GCCGTAAggccgaaaaaaattttaaatcttcaaACGTAANTTCAATGtta
caaaccaaaagggcaaggcgatgatgcccaaataatgcCCAAATGATATG
TACATATATCCAATAAGATTAATTATGATTTGTCGGCCGTCAAgtcgaaa
aattttcgaaatcttgaaacgtaaacctatgaaattagacttcctacatt
ttctcttgagtttcccaaaaaaaattggaaccccccctaaaccctcaaaa
aaaatttgaaaccccccctaaaccctcgaNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTAGAGTATCTGCT
AATTGAAGGTTCTGCTGTGTTCATGCATGCAAAGCTGAATATTTCATATC
TTTGCAGCTTCGTAAATTAACAACCTAGTAAAAATGTTCTTGTCTGGGAC
GCTACTATTTTTGCTTTtcgtttttattctatttggtCTCTAAAGTGGCA
CCTATCATTTCTTTCTGTAAGCacagaaatattcaaaaattatttcaaat
cttttaGAACCgttcttttttcatccaaaaataAGGATATTCTCCGTTTT
GCCCAAAAGTGTTGCTCAAAAAATGACAGCAATATTATGGTGGTTTTTGG
CATTGATAATGTAGTGGGAAATGTTTTTCCTTTCAATGgcgattcttata
agaaaagcaTGTTTGGACTACATAGtctgttttctgtttttcaTAAACTT
GCTAAGTCttgataaatctttaattttcttttcgcGCAGTTTTCATTATC
CTATGTTTTCTCCCTTTGTTTCAATTGAGATCAGGTGGATCGTTGTATCG
AAAGAAAATGGAATATTAACTGAAGAATATAAGAGAGAAGCAAGATGAAA
TATATGAAGGATATCTTGTGTGTGATAATAAGAGAGCAAGATTATTTCGA
AATTTCGACATAATTCTCTCTCTTTCTGTGTCTTTTTTTGAAGATCTTGT
TAATACTATGTTTGTTGTAGTAGAGACTTACGTGCCTTGTTCGAGTCGAA
GCACTGGCAATGGTATTGTGCAAGGTTCTCGATATCTGTAGTACTCTCTG
ATGTTTAACAAATGGAGCATGCGTGAGAATAGAAACTACCTAATTTTCTG
GAGaggagtttgaaattttagaactttttgaatttgaagggTAATGAGCC
GAAAATCAGGCTCATCGGAGCTAAGTAAAGTACATTTTTTCGGCTAGTTA
AGGATATGGccctaaaaaatttttaaaaaggctTTAAGCATGAGAGCCAT
AACTTTCAGAAAGGGACTTCAAATGTGATTAAAAAAGGGTCTTAAAATGt
gctttttctcaacttcagttgagctacaatttgacaatgtctgtctgtgt
gtgtgtgtgtgtctgtctgtctgtcacaaaaactttagggcagcccggag
acttcaaaaatgcttggatttggctgaaattttgcacacttgttccttag
gtgaatatctgggggtgtttctttctttttttgaaaattttgatttttgg
ggcctgggaacgagtttttcaccaaaacgaggctaaaactttagggcagc
ctggagacttcaaaaatgcttggatttggctgaaattttgcacacttgtt
ccttgggtgaatatctggggatgtttcttccatttttcaaaacttttgat
ttttggggcctggggacgagtatttcgccaaaacgaggctaaaaccttag
ggcagcctggagacttcaaaaattgtcagatttggcttaaattttgcaca
cttgttccttgggtgaatatctgggggtgtttttgtcatttttcaaaaat
tttgatttttggggcctggggacgagtttttcgctaaaatgaggctaaaa
ctttggagcagcctggagacttcaaaaattgNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNtggggtctacaattgggcctataaaTAACT
TGaagctactgaagttgagcccagtgcgttgcgcacgttcgactatactT
TTATAatcagcaagatttttttcaacttcaacTTGAAAATATTATCTACT
GTCTCGCTGTCGAAATAATGCTATGACAACATATTCTTAACAGGAATCTT
AGAGAACACTCCTTTCataaaacacccctgtttcacaacCCCAATGGAAC
TTTTTACCACGGTGGGAGTGAAAATGTCTATTgaagtacacgtttttata
caagaacaaactatataagcaCATAAGGCTGAtgacaaaaatgttaagaa
caatctaaaacattttaaggcttcggagactctaaaacacccaatttctt
aggaaaatggacaaaaatactcacaaaatggggaaaatacgaacatgtta
agaacatttttgggcttaaaagctcaaaaagtttagaacattcgaaggct
tcaaaatttttggatgttcttataaaaaacatgtaccaaTGGTTAAAGAC
ATTTTGTTGTTCCTAGGTAAAAAAATCCAGAGGGGATGatgattttggag
tgcaattattTGTATGAATTTAAATGAGGATGAAAATAAAGTCAATTCTC
AGTGAGGTTGAAATTGAAGTATTCTTCCCATCGGggcaaaattttggcaa
aattttccgTAGGTCTTGTTGTACATTTGATAAATGTGGAaacatgaaac
tctgagttatGATTATGTactcattttaaaatttttagtttttgtttgaT
GGCGGAttgaaagataactttttttgataactATATGGCTATGGTTACCT
ATCGAGCACTCTGACACCATCGATTTGTCTANAGGGCtaaattttggcta
aatttcTCGTATGTCTTGTTGTACATTTGATAAATGTGGAaacatgaaac
tctgagttatGATTATGTACTCATTTTAAAATTGTTAGTTTTTGTTTGAT
GGATtaaaagataactttttttgataactATATGGCTATGGTTACCCATC
GAGTACTCTGACATCTTCGATTCGTCTAGAACCTTGATTAAATCGAAATA
CAGGAAGGTTCGATTTATAGAGGCTCGAAATAAAGGGAGTTGGCGGTAGC
TTATTTTGATGATTACAATAGTTGCCAAAGTTTGTTCTCGCCAAAATTGC
CTTTCTTTGATGTAGTCGGTATTTTGATTGCATTACGTATTGACACAAGT
GGCTTCGAAATATAAGTCAAATGCCAAAAAAATCTTTGGCAGATAAGATA
GATATCAGAAAGTCACAAGCACGAAAATCGGAAACCTCGCCTCAGTGATT
ACTTTAATGTAAAAACATTTTACGCCCACAATTCCGTGAATAGCGGTCcg
ctttttgaaagtttattgcaTTTATCCTAAAATTTACCGTTCGTTTTACT
TTGTAAAGATAACAGATTAGACTGGACCAGGACAACCATCGCTTTTGTTG
TGaagatgatttttttataaaaatatccaaaaaaattagaaagcCTTTGG
ATGGTCTTgatttttcgagttttaagccttaaaaatgttcttaagttaac
atattcttaatgtcaccattttgtgagtatttttgtccgttttcctTAGA
AATCGGATCTGGtttcgagtccgcaaagccttaaaatgttcttaacttgt
tcttaatattttgtccatcaaagccttatgttctcatacaatttgttctt
ataaacaacgTGTAGGTGATTTTTTATTCTGATTATAGATACTGGCTGAC
TAATCCTCTTGACATAATCAACTTAAGATTTGTCGTGAATCTGCTGTCGA
ACTTGTTGTTTAATGCGCAGGATAAATAATGTGAGAAATTTCGGAAATCT
GATCTTTAATTTGATCATCAGATTTCTGAGTGGCATCCTCCCTCTGTTCT
GTAGGGTATATATAatgttttcatattttgatatgATGGTATTTCTGTGT
GCATGTTTGAATGGGATTTTCATAGAATAGAGCGTGACTGTTGTCGTTTG
TCTATTTTTCAGATTCACTTTTTATAGTGTACTGGCtttattaaaaaatg
atattgtATGTTTTAAGAAAGCTTTTGTGTTTGAAAAAGAGGTTCATGCT
TCCATTGTGCATGCACTGTTTGCATCGTCAAGAGAAAAGGTTTACGGCTG
TGGGCTACTTTTTGCTCAAATTGTGTGCATTTTGAAAGAAACCAAATCTA
GGGCCTTGACTGCTTCGACAAGGGCTTTAAGAACACGGATATGGAAAATT
TGAGCAGTATCGTTAGAAATTCGCTTCACGTTTTTAGAGACTCTACTTTT
ACTCTATTGACCTTGTTGACCTCTCAGTATGAAGCGTTATATTCATGCGA
TTTACAAACTCTCAAGTGTGAATTTGCGTGATAGAACTAAAATGACGATG
AGATATTTTTGAACACATTTTGGCAATTTTATTTCGGTATCATTGTTGAG
TTTGTTAAATCATTTTCATGGTTGAACTTTCATGGTTGTACTCCTTTGAA
ActtcttgaaatttatttcaAGGGTTTATGTAGATCAGTTTTATGGGTGA
CGACTACACATGTAATCACGTGTTGAAGTATTATGCTAATGAGTAATGAG
GGATTATATATATGGATTTTACACTCTTTGTGAGATCTCTTTCATGTCTC
TTTCTAGTCAATGGGGTGGAAATATCCCAAAGATAGATAGATCCCAACGT
TAGATTGTTTAAAGTTTGGATATTCAGTGATGATTTTTTACAACTGCTAT
AACTTTCCATGTTTAGACGTTACATTTTCGTATTGCTCCAGTATGGTGTT
TGTTACGGATAGGAAGTGTTCATACTGATTTCGGAACGTTTTGGAGCAAt
gaaacggagcagttccgttccgttGAAAAGAACGGAGCGCAAGCGTTCCG
ACCTGTTTTGCTTTGAACGTCTTCTATTTTGACGTTTTGATTCTTGACTT
TCGCAAAGTGTTTTGGAACGTTTTGTTTCGTAGGAAACCGTAACGACTGA
ACATGGACCTAATAGGGAATGTGTATTTATGTGCATTAGGGGCGGAATTC
CAGGTTACTTTTTCCCACCAACAACAATCTCCCAACGGTTCCATGACTGA
AGCATACCAATCAACCTTCCTAAACCCTAATTGCGCTACCATTATGATTC
TAtcgtttttttcacctttttttcttttagagaCATGAAGTTACCTAAAA
TCGATTCACACGAGGAACACGTGCTCATTTCATCGAGTCGAGGAAATCGA
ATCAGTTACAAAAGCGATGAAAAACTTCGATTCCAAGTCAACGTCAACCG
ATTATTAAACGTGAAATCATATTTACACGGCGTAATGGAGAATGAAGGAC
ATCATAATGAATATTTCCCGAGGTTATAcccttcaaaacaaaaacaaatg
aaacattCTGGTTTAAACTCACGGCCGCCGATGAACACAACTAAATTACC
TCCAATTCACAGACCAGAACATAAATAGTGCGTTTTAAACAAGCACATTA
ACCAAATATTATACAGAATCTATAATGAGAAAATGGACCTTAATGGAGCT
TCATAGAGCAAAGGAAGTCAGAACCAACCTTGGTCGAACATGGTAGCGAC
TACCTAATACTACCTACTTCATAAGGTGAAGAGTTTCATGGATGTTTTTT
AAAAACGAGATCTATATGATggggaattttgaaaatgcTCAAAGATGTAC
AGTAGATTCAGATACTTGTTGATAATTGTTAACATGAACACATCCTCACA
TTTTTCGTTTAATTTTTACATAATCAcatcccttctcacagatccggtgG
GATCCGAAAATTGTGCTATTTTTGCCATCCTCACTGAACTTTCTTTTACC
GGATAACAAtgaaatttaaatccccagccatcaAACACATGGGATATCAA
TCCCAATCGAGTTACAGTCCTTCATTTTTACcctcactggctgaaaaatc
ctaccTGGTCTGTGAGAATCCAAGGATAAATCGTGGCCTAgctattttat
aaatttttctttatggGCGCGTATGTGGTTGCTTTTTGAGTGTCCTTGTT
GAGAAGATGTCACTCTCCTATTTCCTCTTGTGACGGTCTTCAGGAAGCAT
TTTGAAGTATGAGCTTAACACCAAGAGTTGAAATGCTAGGCATCTTATTG
AATAACTTAAAATTAGTTCTAGGCTTTCCaagacaaaatttcactttttg
ttaTGATTTAAAATCTCaatacagttgagtctctttaattcgaacctcca
ttactcgaatgtctccataactcaaacaagttttcCAGCACTTTCAGCTA
ACaattataaaccttactctataactcgaaattttcttaactcgaacaaa
tttgagtTCCCTATGcgcgttcgagttatggagactccattgtattaatt
tcaaattttccttaCAAAATATCGGAGACATTGTTTAGAAGTTCAGACTT
TTATTATTTACCAAATCATGAAAGTCTGTAATCTTATTCGATTACCTCTG
TCTTCTACGCTGTTTCTATATATTCCACTCAACAATACATTTCCAATGCA
CAAACCTATCATATCTGAATGAATGTTGGACAAATAGACTTGTTTAATCT
TTTGTAAATAATGTATAAATTATGACCTaagattttaataaaattttatg
gAAATACAATATATGACAACTTACTTTTAACTAAACCTATTGTTGATTTG
TGAATCAGTCACATTCCTTTATACTATctactcccggggggggggggcac
tgggtttgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNcccgtcggtccttttgcccagctgcccccccg
gGTATCTACCCTTAGATGTCTATTCTCCGAATTGGGAATTAAAGTCCTTT
TAGATTCGAGTGTGCACTAAGCAAcactaaattttgtttttgtgtgccAT
GTTTTAACCAATGCTTAAATCTAACAAATTATATACCGTTGAcaagataa
ttcagagcactGCAATTTGTTGTTTTAGAAAACTGACCGTTCACGATTAA
GATTTTTAGATTAattctttcaatcaaaaattttacaaagaAGCTAATAT
AAATCAGCATTAGTTTATATTTACAAATGTACGAAAAAATTTTATCAACA
TAATCGATctcaatttcaaagaaatttgaaatttagcaTATATTTTTCTC
CCCCTCATGTCCTAATCTTAACCAAGGACTTCAATACGCTACAATCAACC
TCGTAATATATTGAtcattttgggtattttaacggtTTTCAGAATTCACT
TTAATTAATTTCgttttggaaaacttttttgagcgtTAGgatctaagtct
taagtctcaaaTGGTCTCAAGAAGTTAAAACTCAGAAGTAATTCCACTTA
ATctaatattatgactttgattgtatcGTTGCTATCATTTCGGACATTAG
GCAAAGCGATAATGCACTATTAGTAAATGTCTGAATATGAGATTATAAGC
TCGTGAAGTTCATGAAGGGGCTTTTCTACTGAATTTCCTTTCCTAATAAA
ttataatattttgactttCGGTTTTTTGTCTACAGTGTGGCCGTAAAGTT
GAAACATCATCAAACATCATTTGCCATCCCAATAAtttagtatatttttt
atttctcaaggaaaatcgGAAATATGATTTTAGAATCTTAGAAATGAAAT
CATAAGATACTATGAAATGATATTATTTCACTGTTTTACAGACACACTGT
AGACTACGTGTTtgtgatgttttgttttgatttatagaTGACTTAACATA
AAATAAATCCCTTAAATAACactattgttttttattattatttgtcAACA
ACTTTTGCCATAAAGCTcttgttttcttttcagttttcaCTTCAATATCA
ACACCACCACCATCATTCGAACCGCCCTGTCCACCGCCCAACGGTTTCCG
AATCTCTGGAGTGGATTTACTTGATAAAATCTTCGATTGAGGTAACAGAT
GATTTTTTAAGTCACTACATTTATCCTTGATAAATTTGTTAACAATATTT
TCAAGTTCAATATATCCATCACTTACGCTTAACTCGCAAAATGTACCATT
AATCGAATCAGCTAATTGCTGTCCTTCACTAACTTGAACCCGGCGCTCGT
TTTTCTCTAAGTCTTTCTTATTACCGATCAGTAAACAAGGGATACCCCTT
GATTTCTTTTGCTGCAATAACATTTTACTGATAGATTGAATTTCATTAAA
ACTGCTTCGATTGTTTATTGAATAGACACATATTAGCCCATTGGTCCAGA
TTAGATCGTTTGCTCTGCCTGACCAGTTGATC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_000716XLOC_000716Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00001314-exon-sc0000010-1491911889:70361..70542TCONS_00001314-exon-sc0000010-1491911889:70361..70542Clytia hemisphaericaexon
TCONS_00001314-exon-sc0000010-1510915933:70361..70542TCONS_00001314-exon-sc0000010-1510915933:70361..70542Clytia hemisphaericaexon
TCONS_00001314-exon-sc0000010-1575043694:70361..70542TCONS_00001314-exon-sc0000010-1575043694:70361..70542Clytia hemisphaericaexon
TCONS_00001314-exon-sc0000010-1491911889:83794..84242TCONS_00001314-exon-sc0000010-1491911889:83794..84242Clytia hemisphaericaexon
TCONS_00001314-exon-sc0000010-1510915933:83794..84242TCONS_00001314-exon-sc0000010-1510915933:83794..84242Clytia hemisphaericaexon
TCONS_00001314-exon-sc0000010-1575043694:83794..84242TCONS_00001314-exon-sc0000010-1575043694:83794..84242Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000010supercontigsc0000010:70361..84242 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.607809	0.539733	1.09734	1.56585	0	0	0	0	0.164122	0.5383	0.251228	0.228045	0.538129	0.113941	0.252306	0.161187	0.295208	0.511927	0.5227	1.13705	1.85578	0.353413	0.375536	1.36697	0.527743	0.193147	0.444438	0.933983	0.530088	0.485805
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00001314 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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