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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00001300 ID=TCONS_00001300|Name=TCONS_00001300|organism=Clytia hemisphaerica|type=transcript|length=1140bp
GTGTATTCTAGTCTGAGAAGTTGGGGGCTGGAAGGCTGGAGTTTGAATTG
AAGCTCGATTGTACGATCATGAGAAAATTTTACCCACGACTAATAATTgt
tatgaaatattttgaagtatTTACGTTAATCGAACAACCGGTCAAACTGG
TTTAAGTTGtattattttgaaatacagagtatAGTTTGCGGTGTACAGCT
GTCCGACGCGCAAGGCCTAAATTTAGCATTGAGCAGGTCGAATGTAAATG
TTTATATTGGAAAGTGTATTGTTATGAGGCAGAATGATGTGGAGAGgaga
aaatgactaaaaataaTGATTTAGGGAGGTCTTTATCTCCACCAAACTTA
TCACAAGTCTGTTCCTGTCATTTACATAATCATCCAGTACAAAAacataa
aacttgaaaaaatcttACCGCTGAGGGTGGAAGAGAGGGAACTTCATATA
AAAGCATGCTGTTACCCTTATTAATTTCATAAACATTACAGACACCAAGT
AATAACATTCAAATGGAAATTTCCGATGGAGTATGAACTGTGAgtgaaaa
tatttataatttttcaacGAGGGTATGCAAAAAGAGCAGCAAGTATCTGC
AAACATTACCTCGAGGTGGATGACGTTTACATACAGCGAGTAGGTACAGA
AGCTCAAGATAGTTTGAGAGGTACTGAACCTTAGTTTAGATAGAGTATAG
GTATTCAAAGCTGTTTTAATTCTTGACCCTTTCTAGGAGATGAGATACCA
GGTATTTCTGACATGAGACTTTCAAAACGATCTCCATCTTAAGAAGTAAG
CTTCCTAGAAGATTTAGTAAGTCACCAATGGAATATCGAGTTGTAACGAA
ATGTCGCCGTACCCGATAAACGATCGTTTAATGCGAGACATCGGACGATA
TTatactttttcaaaaagtgcagGAGTTTCAACGTTCAATTAACTGATTA
AAATCAAGCCCAATAGAGCTTGCAATTAAACGActttaaaaatttacaat
gGAGGGTTTTTCGGATCCATGGGGatctttttcaataatttataAACAGA
CAAAGTTGGAAATGAATGATTACGTGAAAAACCTTGCTGAGTGAGGAGGG
TCCATTCAACAAATAGTCTTTTCATCCACTGCTTTGCCAT Run BLAST on NCBI transcript from alignment at sc0000007:949293..950432 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00001300 ID=TCONS_00001300|Name=TCONS_00001300|organism=Clytia hemisphaerica|type=transcript|length=1140bp|location=Sequence derived from alignment at sc0000007:949293..950432 (Clytia hemisphaerica)
ATGGCAAAGCAGTGGATGAAAAGACTATTTGTTGAATGGACCCTCCTCAC
TCAGCAAGGTTTTTCACGTAATCATTCATTTCCAACTTTGTCTGTTtata
aattattgaaaaagatCCCCATGGATCCGAAAAACCCTCcattgtaaatt
tttaaagTCGTTTAATTGCAAGCTCTATTGGGCTTGATTTTAATCAGTTA
ATTGAACGTTGAAACTCctgcactttttgaaaaagtatAATATCGTCCGA
TGTCTCGCATTAAACGATCGTTTATCGGGTACGGCGACATTTCGTTACAA
CTCGATATTCCATTGGTGACTTACTAAATCTTCTAGGAAGCTTACTTCTT
AAGATGGAGATCGTTTTGAAAGTCTCATGTCAGAAATACCTGGTATCTCA
TCTCCTAGAAAGGGTCAAGAATTAAAACAGCTTTGAATACCTATACTCTA
TCTAAACTAAGGTTCAGTACCTCTCAAACTATCTTGAGCTTCTGTACCTA
CTCGCTGTATGTAAACGTCATCCACCTCGAGGTAATGTTTGCAGATACTT
GCTGCTCTTTTTGCATACCCTCgttgaaaaattataaatattttcacTCA
CAGTTCATACTCCATCGGAAATTTCCATTTGAATGTTATTACTTGGTGTC
TGTAATGTTTATGAAATTAATAAGGGTAACAGCATGCTTTTATATGAAGT
TCCCTCTCTTCCACCCTCAGCGGTaagattttttcaagttttatgtTTTT
GTACTGGATGATTATGTAAATGACAGGAACAGACTTGTGATAAGTTTGGT
GGAGATAAAGACCTCCCTAAATCAttatttttagtcattttctcCTCTCC
ACATCATTCTGCCTCATAACAATACACTTTCCAATATAAACATTTACATT
CGACCTGCTCAATGCTAAATTTAGGCCTTGCGCGTCGGACAGCTGTACAC
CGCAAACTatactctgtatttcaaaataataCAACTTAAACCAGTTTGAC
CGGTTGTTCGATTAACGTAAatacttcaaaatatttcataacAATTATTA
GTCGTGGGTAAAATTTTCTCATGATCGTACAATCGAGCTTCAATTCAAAC
TCCAGCCTTCCAGCCCCCAACTTCTCAGACTAGAATACAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00001300-exon-sc0000007-1491911889:949293..950432 | TCONS_00001300-exon-sc0000007-1491911889:949293..950432 | Clytia hemisphaerica | exon |
| TCONS_00001300-exon-sc0000007-1510915933:949293..950432 | TCONS_00001300-exon-sc0000007-1510915933:949293..950432 | Clytia hemisphaerica | exon |
| TCONS_00001300-exon-sc0000007-1575043694:949293..950432 | TCONS_00001300-exon-sc0000007-1575043694:949293..950432 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000007 | supercontig | sc0000007:949293..950432 . |
Blast
The following BLAST results are available for this feature:
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